View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15076_low_10 (Length: 358)
Name: NF15076_low_10
Description: NF15076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15076_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 17 - 357
Target Start/End: Complemental strand, 14748710 - 14748371
Alignment:
| Q |
17 |
tctctacattagatttcactcataggggctgaaatcattatttacttatcaccgcaatggataacacatcttacaatcttctctatgtgggtgaaattat |
116 |
Q |
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| T |
14748710 |
tctctacattagatttcactcataggggctgaaatcattatttacttatcaccgcaatg-ataacacatcttacaatcttctctaagtgggtgaaattat |
14748612 |
T |
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| Q |
117 |
tcttgtcttgtcttctgatactctccaccaacccatcatgcctaaattgtactacaaatttggtatgaagaatttagatcccttgaaatattttatgggt |
216 |
Q |
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| T |
14748611 |
tcttgtcttgtcttctgatactctccaccaacccatcatgcctaaattgtattccaaatttggtatgaagaatttagatcccttgaaatattttatgggt |
14748512 |
T |
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| Q |
217 |
atatctattacacgacattaataaggtcttattattttactaaaagaaatatttcgaagaaatcaatgagcaagaacatatgtcttcttgcaaacaatct |
316 |
Q |
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| T |
14748511 |
atatctattacacgacattaataaggtcttattattttactaaaagaaatatttcgaagaaatcaatgagcaagaacatatgtcttcttgcaaaccatct |
14748412 |
T |
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| Q |
317 |
tctacagcggttgacacacaagttaaactctgtgctgcttc |
357 |
Q |
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| T |
14748411 |
tctacaccggttgacacacaagttaaactcagtggtgcttc |
14748371 |
T |
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