View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1507_high_30 (Length: 317)
Name: NF1507_high_30
Description: NF1507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1507_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 305
Target Start/End: Complemental strand, 47201935 - 47201648
Alignment:
| Q |
18 |
acatttacccaagtacatgataaacaaacaagtacagtgtgtgtgttacactaaattcaacagtaccatattcttattattagtattataagaagaaaca |
117 |
Q |
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| T |
47201935 |
acatttacccaagtacatgataaacaaacaagtacagtgtgtgtgttacactaaattcaatagtaccatattcttattattagtattataagaagaaaca |
47201836 |
T |
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| Q |
118 |
aagtagccaacttttttcacttgtcgttcatggcttcaacaatgatgggttttggtgtttcatccatttccaccataacatattctcaaagaagatatct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47201835 |
aagtagccaacttttttcacttgtcgttcatggcttcaacaatgatgggttttggtgtttcatccatttccaccataacatattctcaaagaagatatct |
47201736 |
T |
|
| Q |
218 |
tcaacctcgtaaatttcaagttcatcaatcacgtagcttagctatattgtcatatgcatctgatcaattaaacggaacttcttcttct |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||| |
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| T |
47201735 |
tcaacctcgtaaatttcaagttcatcaatcacgtagcttagatatattgtcatctgaatctgatccattaaacggaacttcttcttct |
47201648 |
T |
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