View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1507_high_59 (Length: 236)
Name: NF1507_high_59
Description: NF1507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1507_high_59 |
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Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 217
Target Start/End: Complemental strand, 19849175 - 19848974
Alignment:
| Q |
16 |
aatataatactaaatttagaaagtcaacaaagatgaccattcatgcttagaaaataataaaaattctacaacttatgaattttgtataaatgtttatata |
115 |
Q |
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|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
19849175 |
aatataatactaaatttagaaagtcaacgaagataaccattcatgcttagaaaataataaaaattctacaacttatggattttgtataaatgtttatata |
19849076 |
T |
|
| Q |
116 |
tcattttgttttgtatacatgtttataaacatacaactataattatacaacttatgggttttttagagaactaaagataatatacaaaattagagttgtc |
215 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19849075 |
tcattttgttttgtatacatgtttataaacatataactataattatacaacttatgggttttttagagaactaaagataatatacaaaattagagttgtc |
19848976 |
T |
|
| Q |
216 |
ta |
217 |
Q |
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|| |
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| T |
19848975 |
ta |
19848974 |
T |
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