View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1507_low_57 (Length: 249)
Name: NF1507_low_57
Description: NF1507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1507_low_57 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 233
Target Start/End: Complemental strand, 8929047 - 8928827
Alignment:
| Q |
14 |
gagattggaacagaacacgacaataagatcattgtcaaaatgtacaaacacattttatgctgatttgatgttcaagtagccaacttgccaaaataaatcc |
113 |
Q |
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| T |
8929047 |
gagattggaacagaacacgacaataagatcattgtcaaaatgtacaaacacattttatgctgatttgatgttcaagtagccaacttgccaaaataaatcc |
8928948 |
T |
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| Q |
114 |
aagtggcaaat-gaacaaattttcccaaaacgaatagaataacaattccatttcatgaagaaagaaaacaaaaaagagaaatannnnnnnctcaacttac |
212 |
Q |
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| T |
8928947 |
aagtggcaaatggaacgaattttcccaaaacgaatagaataacaattccatttcatgaagaaagaaaacaaaaaagagaaatatttttttctcagcttac |
8928848 |
T |
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| Q |
213 |
gtttctatttaccttgggttt |
233 |
Q |
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| T |
8928847 |
gtttctatttaccttgggttt |
8928827 |
T |
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