View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15080_high_8 (Length: 352)

Name: NF15080_high_8
Description: NF15080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15080_high_8
NF15080_high_8
[»] chr1 (30 HSPs)
chr1 (16-254)||(6708638-6708875)
chr1 (256-352)||(28455874-28455970)
chr1 (265-352)||(39276359-39276446)
chr1 (254-352)||(41761443-41761541)
chr1 (254-352)||(48660020-48660118)
chr1 (256-352)||(32007074-32007170)
chr1 (261-352)||(5943686-5943777)
chr1 (265-348)||(29587261-29587344)
chr1 (256-352)||(5055820-5055916)
chr1 (256-352)||(41808202-41808298)
chr1 (255-352)||(45813043-45813140)
chr1 (256-352)||(192415-192511)
chr1 (265-349)||(35945806-35945890)
chr1 (256-352)||(20748-20844)
chr1 (256-352)||(29994415-29994511)
chr1 (267-352)||(46447409-46447494)
chr1 (272-346)||(35224356-35224430)
chr1 (291-352)||(50106228-50106289)
chr1 (268-342)||(47111469-47111543)
chr1 (256-352)||(11688263-11688359)
chr1 (280-352)||(7059491-7059563)
chr1 (265-352)||(21938951-21939038)
chr1 (254-324)||(45294656-45294726)
chr1 (265-334)||(3688286-3688355)
chr1 (271-352)||(7275696-7275777)
chr1 (256-352)||(2088937-2089033)
chr1 (316-352)||(41039335-41039371)
chr1 (265-343)||(9385750-9385826)
chr1 (272-352)||(26032814-26032897)
chr1 (265-349)||(49783716-49783800)
[»] chr3 (33 HSPs)
chr3 (256-352)||(43247682-43247778)
chr3 (251-352)||(29689514-29689615)
chr3 (252-352)||(7824486-7824586)
chr3 (253-352)||(55018066-55018165)
chr3 (252-352)||(33334604-33334704)
chr3 (256-352)||(51665957-51666053)
chr3 (256-352)||(4601425-4601521)
chr3 (256-352)||(54151713-54151809)
chr3 (256-352)||(54158266-54158362)
chr3 (267-352)||(28844515-28844600)
chr3 (267-352)||(35461511-35461596)
chr3 (268-352)||(36229026-36229110)
chr3 (268-352)||(3113027-3113111)
chr3 (272-352)||(9349708-9349788)
chr3 (256-345)||(1778851-1778940)
chr3 (256-352)||(42392837-42392933)
chr3 (271-352)||(29750636-29750717)
chr3 (256-337)||(41377584-41377665)
chr3 (272-352)||(475312-475392)
chr3 (256-352)||(52500838-52500934)
chr3 (265-325)||(51112523-51112583)
chr3 (289-352)||(38257335-38257398)
chr3 (271-352)||(43775238-43775319)
chr3 (268-352)||(448907-448991)
chr3 (256-352)||(32001456-32001552)
chr3 (268-349)||(27230679-27230759)
chr3 (265-337)||(2590848-2590920)
chr3 (256-352)||(7958569-7958665)
chr3 (268-314)||(45686097-45686143)
chr3 (290-352)||(47635037-47635099)
chr3 (267-352)||(50729535-50729620)
chr3 (267-352)||(50783229-50783314)
chr3 (265-325)||(42296720-42296780)
[»] chr7 (43 HSPs)
chr7 (255-352)||(44083939-44084036)
chr7 (256-352)||(40058238-40058334)
chr7 (253-352)||(31770564-31770663)
chr7 (254-352)||(23358183-23358281)
chr7 (265-346)||(7162826-7162907)
chr7 (256-352)||(4106738-4106834)
chr7 (265-352)||(27229510-27229597)
chr7 (265-352)||(43753786-43753873)
chr7 (254-348)||(2146634-2146728)
chr7 (254-348)||(25112283-25112377)
chr7 (255-352)||(25546307-25546404)
chr7 (265-349)||(8439087-8439171)
chr7 (271-352)||(4107324-4107405)
chr7 (265-352)||(29484787-29484874)
chr7 (268-352)||(5772851-5772935)
chr7 (265-352)||(47250283-47250370)
chr7 (256-352)||(43203306-43203402)
chr7 (274-352)||(41183833-41183911)
chr7 (267-352)||(11355834-11355919)
chr7 (271-352)||(28603026-28603107)
chr7 (271-352)||(38033744-38033825)
chr7 (267-352)||(48146764-48146849)
chr7 (289-352)||(47570750-47570813)
chr7 (273-346)||(4001880-4001953)
chr7 (255-352)||(10220504-10220601)
chr7 (265-346)||(42081655-42081735)
chr7 (271-343)||(13887186-13887258)
chr7 (256-352)||(47557781-47557877)
chr7 (289-352)||(38781240-38781303)
chr7 (289-352)||(39514015-39514078)
chr7 (267-325)||(29255728-29255786)
chr7 (254-352)||(47960987-47961085)
chr7 (254-352)||(48444184-48444282)
chr7 (267-352)||(5587291-5587376)
chr7 (267-352)||(5592252-5592337)
chr7 (268-352)||(15634911-15634995)
chr7 (254-341)||(32606373-32606460)
chr7 (267-352)||(46427371-46427456)
chr7 (255-352)||(27915612-27915710)
chr7 (256-314)||(34763454-34763512)
chr7 (265-307)||(43171016-43171058)
chr7 (265-325)||(7312512-7312573)
chr7 (271-352)||(25049990-25050071)
[»] chr8 (35 HSPs)
chr8 (256-352)||(35779529-35779625)
chr8 (255-352)||(32333113-32333210)
chr8 (254-352)||(1372-1470)
chr8 (254-352)||(28817254-28817352)
chr8 (256-352)||(6602550-6602646)
chr8 (256-352)||(6678003-6678099)
chr8 (256-352)||(7792661-7792757)
chr8 (255-352)||(42192671-42192768)
chr8 (256-352)||(70555-70651)
chr8 (256-352)||(7813322-7813418)
chr8 (265-352)||(39303318-39303405)
chr8 (255-352)||(4531014-4531111)
chr8 (267-352)||(39435293-39435378)
chr8 (267-352)||(40911232-40911316)
chr8 (268-352)||(1078680-1078764)
chr8 (256-352)||(9292018-9292114)
chr8 (256-346)||(10963278-10963368)
chr8 (274-352)||(42885192-42885270)
chr8 (267-352)||(3822407-3822492)
chr8 (256-342)||(12534760-12534846)
chr8 (255-352)||(41849263-41849360)
chr8 (280-352)||(5385362-5385434)
chr8 (253-352)||(18386705-18386804)
chr8 (255-352)||(45264672-45264768)
chr8 (289-352)||(31532157-31532220)
chr8 (255-307)||(29425356-29425408)
chr8 (268-349)||(31969755-31969836)
chr8 (265-348)||(18752350-18752433)
chr8 (297-352)||(33731496-33731551)
chr8 (254-352)||(6099570-6099668)
chr8 (268-312)||(20269554-20269598)
chr8 (268-312)||(21056183-21056227)
chr8 (267-352)||(14400726-14400811)
chr8 (265-325)||(5700708-5700768)
chr8 (292-352)||(9775074-9775134)
[»] chr5 (22 HSPs)
chr5 (256-352)||(21018223-21018319)
chr5 (255-352)||(35317729-35317826)
chr5 (256-352)||(13203957-13204053)
chr5 (265-352)||(4824971-4825058)
chr5 (254-352)||(1191572-1191670)
chr5 (256-352)||(12257356-12257452)
chr5 (265-352)||(6021001-6021088)
chr5 (265-352)||(8734005-8734092)
chr5 (256-352)||(9576993-9577089)
chr5 (255-349)||(27721430-27721524)
chr5 (254-352)||(40177622-40177720)
chr5 (251-314)||(32143472-32143535)
chr5 (255-325)||(11124651-11124721)
chr5 (255-352)||(2970983-2971080)
chr5 (289-352)||(31909417-31909480)
chr5 (256-352)||(29265875-29265971)
chr5 (265-344)||(3049094-3049173)
chr5 (265-325)||(3386959-3387019)
chr5 (256-352)||(21112049-21112145)
chr5 (256-322)||(30127894-30127960)
chr5 (265-352)||(17984774-17984861)
chr5 (265-352)||(28591382-28591469)
[»] chr4 (40 HSPs)
chr4 (256-352)||(45874055-45874151)
chr4 (255-352)||(1173950-1174047)
chr4 (265-352)||(23417515-23417602)
chr4 (256-352)||(19849535-19849631)
chr4 (256-352)||(34739280-34739376)
chr4 (254-352)||(28798420-28798518)
chr4 (267-352)||(43139938-43140023)
chr4 (253-352)||(53457821-53457920)
chr4 (238-352)||(26424890-26425003)
chr4 (255-352)||(238490-238587)
chr4 (267-352)||(12735442-12735527)
chr4 (271-352)||(55214667-55214748)
chr4 (256-352)||(54768464-54768560)
chr4 (255-352)||(18257328-18257425)
chr4 (251-352)||(29581075-29581176)
chr4 (265-352)||(22607994-22608081)
chr4 (255-344)||(11277981-11278070)
chr4 (251-352)||(19673961-19674062)
chr4 (265-346)||(3465761-3465842)
chr4 (251-352)||(19814100-19814201)
chr4 (256-349)||(32441119-32441212)
chr4 (265-352)||(19225268-19225355)
chr4 (281-352)||(39807869-39807940)
chr4 (256-350)||(2864782-2864876)
chr4 (267-352)||(12867852-12867937)
chr4 (261-349)||(23858483-23858571)
chr4 (256-352)||(55400228-55400324)
chr4 (255-352)||(12767086-12767183)
chr4 (268-352)||(23710365-23710449)
chr4 (255-346)||(32778124-32778215)
chr4 (289-352)||(2075538-2075601)
chr4 (270-345)||(22910296-22910371)
chr4 (270-345)||(22968151-22968226)
chr4 (277-352)||(49030771-49030845)
chr4 (269-352)||(51287614-51287697)
chr4 (271-352)||(50033396-50033478)
chr4 (273-325)||(2804539-2804591)
chr4 (256-352)||(37134048-37134144)
chr4 (265-325)||(39284634-39284694)
chr4 (317-352)||(1966611-1966646)
[»] chr2 (37 HSPs)
chr2 (256-352)||(23839859-23839955)
chr2 (256-349)||(26605624-26605717)
chr2 (255-352)||(45125197-45125294)
chr2 (238-352)||(33083586-33083700)
chr2 (255-352)||(10639638-10639735)
chr2 (254-352)||(34460367-34460465)
chr2 (255-348)||(11708677-11708770)
chr2 (268-352)||(37197642-37197726)
chr2 (265-352)||(11816583-11816670)
chr2 (255-348)||(11459714-11459807)
chr2 (255-348)||(19537306-19537399)
chr2 (255-352)||(29659250-29659347)
chr2 (253-352)||(19816217-19816316)
chr2 (256-352)||(19048754-19048850)
chr2 (255-352)||(39535566-39535663)
chr2 (253-352)||(4851317-4851416)
chr2 (265-352)||(39831476-39831562)
chr2 (265-335)||(25501832-25501902)
chr2 (256-346)||(34234530-34234620)
chr2 (265-352)||(16654372-16654459)
chr2 (267-346)||(21312216-21312295)
chr2 (267-352)||(4800887-4800972)
chr2 (255-347)||(7275923-7276016)
chr2 (256-352)||(27137950-27138045)
chr2 (256-352)||(45201904-45202000)
chr2 (265-352)||(43684078-43684165)
chr2 (265-351)||(42025679-42025765)
chr2 (271-352)||(40786241-40786322)
chr2 (265-352)||(6055037-6055124)
chr2 (256-307)||(42578180-42578231)
chr2 (269-314)||(38440267-38440312)
chr2 (271-352)||(43778500-43778581)
chr2 (265-340)||(15782599-15782674)
chr2 (272-307)||(32844654-32844689)
chr2 (265-352)||(33001712-33001798)
chr2 (271-352)||(7349113-7349194)
chr2 (271-352)||(12366743-12366824)
[»] scaffold0032 (1 HSPs)
scaffold0032 (256-352)||(56481-56577)
[»] chr6 (26 HSPs)
chr6 (254-352)||(33621492-33621590)
chr6 (256-352)||(33704216-33704312)
chr6 (256-348)||(21000692-21000784)
chr6 (267-352)||(21037302-21037386)
chr6 (256-352)||(28322932-28323028)
chr6 (256-352)||(11572008-11572104)
chr6 (256-314)||(35218698-35218756)
chr6 (255-352)||(2959148-2959245)
chr6 (267-352)||(4464138-4464223)
chr6 (281-346)||(16518448-16518513)
chr6 (265-346)||(33255498-33255578)
chr6 (255-352)||(361010-361107)
chr6 (256-352)||(12252023-12252119)
chr6 (273-352)||(32289363-32289441)
chr6 (265-352)||(32353973-32354059)
chr6 (270-352)||(584816-584897)
chr6 (256-352)||(24619111-24619207)
chr6 (256-336)||(10226540-10226620)
chr6 (254-314)||(28592186-28592246)
chr6 (269-352)||(14495642-14495725)
chr6 (274-349)||(19145489-19145563)
chr6 (265-352)||(29009682-29009769)
chr6 (303-352)||(17590394-17590443)
chr6 (268-312)||(5598847-5598891)
chr6 (265-341)||(7197849-7197925)
chr6 (254-298)||(14939146-14939190)
[»] scaffold1348 (1 HSPs)
scaffold1348 (256-352)||(894-990)
[»] scaffold0119 (2 HSPs)
scaffold0119 (256-352)||(13983-14079)
scaffold0119 (256-352)||(19663-19759)
[»] scaffold0044 (1 HSPs)
scaffold0044 (256-352)||(10005-10101)
[»] scaffold0038 (1 HSPs)
scaffold0038 (256-352)||(114252-114348)
[»] scaffold0067 (1 HSPs)
scaffold0067 (265-352)||(34827-34914)
[»] scaffold0053 (1 HSPs)
scaffold0053 (267-352)||(22174-22259)
[»] scaffold0352 (1 HSPs)
scaffold0352 (267-352)||(8975-9060)
[»] scaffold0360 (1 HSPs)
scaffold0360 (265-339)||(14504-14578)
[»] scaffold0495 (1 HSPs)
scaffold0495 (256-336)||(3259-3339)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 6708638 - 6708875
Alignment:
Q  16 aaaagatacgatttgattccaattttgtaatctacacttgaaatattatgaaaaggagagaccacaacacttgtgtgcaagtatacttctcttcacacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6708638 aaaagatacgatttgattccaattttgtaatctacacttgaaatattatgaaaaggagagaccacaacacttg-gtgcaagtatacttctcttcacacat 6708736  T
Q  116 acaaaaggacaagtaaaattagtggatctgtggatgttctgtattatcccaaatcattaaataatcagccactgagtttgttcgttctccaacggtgaaa 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6708737 acaaaagaacaagtaaaattagtggatctgtggatgttctgtattatcccaaatcattaaataatcagccactgagtttgttcgttcaccaacggtgaaa 6708836  T
Q  216 ttttaatccaaatgaactaaattaaatataaaatataat 254  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6708837 ttttaatccaaatgaactaaattaaatataaaatataat 6708875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 28455874 - 28455970
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  28455874 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 28455970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 39276359 - 39276446
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  39276359 tcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtt 39276446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 41761541 - 41761443
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  41761541 ttgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtt 41761443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 48660020 - 48660118
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||||||||||    
T  48660020 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacagttgtgtgtgagtt 48660118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 32007074 - 32007170
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  32007074 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 32007170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 5943686 - 5943777
Alignment:
Q  261 gaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||    
T  5943686 gaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacagttgtttgtgagtt 5943777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 348
Target Start/End: Original strand, 29587261 - 29587344
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||    
T  29587261 tcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacaattgtgtgtg 29587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 5055916 - 5055820
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||| |||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  5055916 gtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 5055820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 41808202 - 41808298
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||| ||||||||||||||||||||||    
T  41808202 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtt 41808298  T

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Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 45813140 - 45813043
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| |||||||||||||| |||||||| ||||||||||| ||||| | |||||| |||||||||| ||||||||||||||||||||||||||    
T  45813140 tgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 45813043  T

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Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 192415 - 192511
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||| ||||||| ||||||||||||||||||||||||| | | |||||||| | ||||||||||||||||||||||||    
T  192415 gtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagtt 192511  T

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Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 35945806 - 35945890
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    ||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  35945806 tcctagctcaactggtaaatgccgaaattgtaaggctggacgttgtgacctgggttcgaacccggaacctcacagttgtgtgtga 35945890  T

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Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 20748 - 20844
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| ||||||||||||||||| |||||||||||| |||||  |||||| || ||||||| ||||||||||||||||||||||||||    
T  20748 gtctagaagtcctaactcaactggcaaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacagttgtgtgtgagtt 20844  T

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Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 29994511 - 29994415
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||| |||||  ||| | |||||||||| || ||||||||| |||||||||||||    
T  29994511 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacccgagacctcacaattgtgtgtgagtt 29994415  T

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Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 46447494 - 46447409
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| |||||||||||||||| ||||||||||||  ||||| || ||| |||||||||| ||||||||||||||| ||||||||||    
T  46447494 ctagttcaactggcaaatgccgaaattgcaaggctcgacgtcgtaacccgggttcgaacccgggacctcacagttatgtgtgagtt 46447409  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 35224356 - 35224430
Alignment:
Q  272 tcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    ||||||||||||||| |||| |||||||||||||||  ||||| |||||||||| | ||||||||||||||||||    
T  35224356 tcaactggcaaatgcgaaaaatgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtg 35224430  T

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Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 50106289 - 50106228
Alignment:
Q  291 attgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  50106289 attgcaaggccgaacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtt 50106228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 47111469 - 47111543
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttg 342  Q
    ||||||||||| |||||||| ||||||||||| ||||||| |||||||||||| |||| | ||||||| ||||||    
T  47111469 tagctcaactgacaaatgccgaaattgcaaggtcggacgtcgtgacctgggtttgaacccaggacctcgcagttg 47111543  T

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Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 11688263 - 11688359
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||| |||||  | |||||||||| ||| |||||||||||  |||||||| || |||| ||| |||||||||||||||    
T  11688263 gtctagaagtcctagctcaactgacaaatatcgaaattgcaagcccgaacgttgtgaccctggttcgaattcaggacttcagagttgtgtgtgagtt 11688359  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 7059491 - 7059563
Alignment:
Q  280 caaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||||||||||||| | ||||| |||||| |||||||||   | |||||||||||||||||||||||    
T  7059491 caaatgtcaaaattgcaaggtcagacgtcgtgacccgggttcgaatctgagacctcacagttgtgtgtgagtt 7059563  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 21938951 - 21939038
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||| ||||||| |||||| ||||||||| ||  ||| | || ||||||  | |||||||||||||||||| |||||    
T  21938951 tcctagctcaactggtaaatgccgaaattgtaaggccggatgtcatgatccggattcgaatccaggacctcacagttgtgtgcgagtt 21939038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 45294656 - 45294726
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaa 324  Q
    |||||| ||| ||||||||||||| ||||||||| |||||||||| |||||| |  ||||| |||||||||    
T  45294656 ttgtctagaagtcctagctcaactagcaaatgccgaaattgcaagaccggacatcatgacccgggttcgaa 45294726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 3688355 - 3688286
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacct 334  Q
    |||||| ||||||| ||||| ||||||||||||||  |||||||||||| ||| ||||||| ||| ||||    
T  3688355 tcctagttcaactgacaaattccaaaattgcaaggaaggacgttgtgacttggattcgaacccggaacct 3688286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 7275696 - 7275777
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||| | |||||| |||| |||||||| ||||  || ||||||| ||| || |||||||||||| ||||||    
T  7275696 ctcaactggcaaatgtcgaaattgtaaggtcggacgttatgactcggattcgaacccggaacttcacagttgtgtatgagtt 7275777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 2089033 - 2088937
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||  | |||||| |||| | ||| | |||||  |||||||||||| | |||||||| |||| ||||||||    
T  2089033 gtctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgactcgggttcgaactcagaacctcacaattgtatgtgagtt 2088937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 41039371 - 41039335
Alignment:
Q  316 gggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41039371 gggttcgaacccgggacctcacagttgtgtgtgagtt 41039335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 9385750 - 9385826
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgt 343  Q
    ||||| || |||||||||||||| || || ||||| ||||||| |||||| |||||| ||| |||||||||||||||||    
T  9385750 tcctaacttaactggcaaatgccgaa-ttacaaggtcggacgtcgtgacc-gggttcaaacgcgggacctcacagttgt 9385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 26032814 - 26032897
Alignment:
Q  272 tcaactggcaaatgccaaaattgcaaggccgg---acgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| |||||||| |||||| |||| |||   |||| |||||| ||||||||||  || ||||||||||| ||||||||||    
T  26032814 tcaactgacaaatgccgaaattgtaaggtcggcggacgtcgtgacccgggttcgaacctggaacctcacagttttgtgtgagtt 26032897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 49783716 - 49783800
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    ||||| ||||| ||||||||| | ||||||||||| || ||||  |||   |||||||||| ||| ||||||||||||| |||||    
T  49783716 tcctaactcaattggcaaatgtcgaaattgcaaggtcgaacgtcatgattcgggttcgaacccggaacctcacagttgtatgtga 49783800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 43247778 - 43247682
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43247778 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacagttgtgtgtgagtt 43247682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 251 - 352
Target Start/End: Complemental strand, 29689615 - 29689514
Alignment:
Q  251 taattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgag 350  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||    
T  29689615 taattgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgag 29689516  T
Q  351 tt 352  Q
    ||    
T  29689515 tt 29689514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 252 - 352
Target Start/End: Complemental strand, 7824586 - 7824486
Alignment:
Q  252 aattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagt 351  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||    
T  7824586 aattgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagt 7824487  T
Q  352 t 352  Q
    |    
T  7824486 t 7824486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 352
Target Start/End: Complemental strand, 55018165 - 55018066
Alignment:
Q  253 attgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  55018165 attgtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 55018066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 252 - 352
Target Start/End: Original strand, 33334604 - 33334704
Alignment:
Q  252 aattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagt 351  Q
    |||||||| ||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  33334604 aattgtctagaagtcctagctcaacttgcaaatgccgaaattgcaaagccggacgttgtgacctgagttcgaatccgggacctcacagttgtgtgtgagt 33334703  T
Q  352 t 352  Q
    |    
T  33334704 t 33334704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 51666053 - 51665957
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||||    
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacagttgtgtgtgagtt 51665957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 4601425 - 4601521
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||| ||||||||||||||||||||||    
T  4601425 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtt 4601521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 54151809 - 54151713
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||| ||||||    
T  54151809 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtatgagtt 54151713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 54158266 - 54158362
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||| | |||||||||| ||||||||||||||||||||||||||    
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtt 54158362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 28844515 - 28844600
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||||    
T  28844515 ctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagtt 28844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 35461596 - 35461511
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||| ||| ||||||||||||||||||||||    
T  35461596 ctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgagtt 35461511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 36229110 - 36229026
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||||| |||||||||||||||||||  ||| | |||||||||| ||||||||||||||||||||||||||    
T  36229110 tagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtt 36229026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 3113111 - 3113027
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||| | |||||||| ||||| ||||||||||||||||||||    
T  3113111 tagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgagttcgaacccgggatctcacagttgtgtgtgagtt 3113027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 9349788 - 9349708
Alignment:
Q  272 tcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||| ||||||||||| ||||||| |||| | |||||||||| ||||||||||||||||||||||||||    
T  9349788 tcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtt 9349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 1778851 - 1778940
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgt 345  Q
    |||| ||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||| ||| |||||||| ||||||    
T  1778851 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacccggaacctcacaattgtgt 1778940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 42392933 - 42392837
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||| |||||||  ||| | ||| |||||| |||||||||||| |||||||||||||    
T  42392933 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcacaattgtgtgtgagtt 42392837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 29750636 - 29750717
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||| |||||||||||| |||||| |||||| || |||||||| | ||||||||| ||||| |||||||    
T  29750636 ctcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccggattcgaactagagacctcacatttgtgcgtgagtt 29750717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 41377584 - 41377665
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcac 337  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||||  ||| |  ||||||||| |||||||||||    
T  41377584 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccaggttcgaacccgggacctcac 41377665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 475392 - 475312
Alignment:
Q  272 tcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| ||||||  ||||||||||| |||||||  ||| | |||||||||||||| ||||||||||||||||||||||    
T  475392 tcaactgggaaatgctgaaattgcaaggtcggacgtcatgatccgggttcgaactcggaacctcacagttgtgtgtgagtt 475312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 52500838 - 52500934
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||| | |||||| ||||||||||||  ||| | ||||||||||  |  ||||||||||||||||||||||    
T  52500838 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacctgaaacctcacagttgtgtgtgagtt 52500934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 51112583 - 51112523
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    ||||||||||||||||||||||| ||||||| |||||||||||  ||||| ||||||||||    
T  51112583 tcctagctcaactggcaaatgccgaaattgctaggccggacgtcatgaccggggttcgaac 51112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 38257398 - 38257335
Alignment:
Q  289 aaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||| ||||||| ||||||||||||||||| | | |||||||| |||||||||||||    
T  38257398 aaattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcacaattgtgtgtgagtt 38257335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 43775238 - 43775319
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| || |||||||  ||| | ||||||||||| | ||||||    
T  43775238 ctcaactggcaaatgccgaaattgtaaggtcggacgttgtgacttgcgttcgaatccggaatctcacagttgtatttgagtt 43775319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 448991 - 448907
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||| |||||| |||||||| |||||||||||| |||| | |  |||||||   ||||||||||||||| ||||||||    
T  448991 tagctcaactgacaaatgtcaaaattgtaaggccggacgtcgtgatccgaattcgaacctaggacctcacagttgtttgtgagtt 448907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 32001552 - 32001456
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| ||||||||| ||||||| |||||| ||||||| || |  ||| |  |||||||||||| || ||||||||||||||||||||    
T  32001552 gtctagaagtcctacctcaactggtaaatgccgaaattgtaaggccgaacatcttgaaccaggttcgaactcgagatctcacagttgtgtgtgagtt 32001456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 27230679 - 27230759
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    |||||||||||  ||||||  ||||||||||||| ||| | ||||||||| ||| |||||||||  ||||||||||||||||    
T  27230679 tagctcaactgataaatgctgaaattgcaaggccagacatcgtgacctggattcaaactcggga-ttcacagttgtgtgtga 27230759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 2590920 - 2590848
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcac 337  Q
    ||||| ||||||||| ||||| | |||||||||||||| || | |||| |||||||||||| | |||||||||    
T  2590920 tcctaactcaactggaaaatgtcgaaattgcaaggccgaacatcgtgatctgggttcgaaccctggacctcac 2590848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 7958569 - 7958665
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| |||||||| |||||| |||||||| || || ||| |  |||| | |||||||||| ||||||||||||||| ||||| ||||    
T  7958569 gtctagaagtcctacctcaactgacaaatgtcaaaattgtaaagcaggatgccgtgatccgggttcgaacccgggacctcacagttatgtgtaagtt 7958665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 45686143 - 45686097
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 314  Q
    |||||||||| ||||||||| |||||| |||||||||||| ||||||    
T  45686143 tagctcaactagcaaatgccgaaattgaaaggccggacgtcgtgacc 45686097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 47635099 - 47635037
Alignment:
Q  290 aattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||| ||||| ||||||||||||||||||  | ||||||| ||||| ||||| ||||    
T  47635099 aattgcaaggtcggacattgtgacctgggttcgaatccaggacctcgcagttatgtgtaagtt 47635037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 50729535 - 50729620
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||||| |||||| |||| | ||||| |||| |||| |||||||  | |||||| ||||| | ||||||||    
T  50729535 ctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtt 50729620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 50783314 - 50783229
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||||| |||||| |||| | ||||| |||| |||| |||||||  | |||||| ||||| | ||||||||    
T  50783314 ctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtt 50783229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 42296720 - 42296780
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    ||||||||||||||  ||||||||||||||  |||||||| ||  ||||| ||||||||||    
T  42296720 tcctagctcaactgcaaaatgccaaaattgttaggccggatgtcatgaccggggttcgaac 42296780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 44083939 - 44084036
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  44083939 tgtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 44084036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 40058238 - 40058334
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  40058238 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtatgagtt 40058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 352
Target Start/End: Complemental strand, 31770663 - 31770564
Alignment:
Q  253 attgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  31770663 attgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 31770564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 23358183 - 23358281
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| |||||||||||||||||||| || ||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||    
T  23358183 ttgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacagttgtgtgtgagtt 23358281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 7162907 - 7162826
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  7162907 tcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcacaattgtgtg 7162826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 4106738 - 4106834
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||| ||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  4106738 gtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 4106834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 27229597 - 27229510
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| |||||||| |||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  27229597 tcctaactcaactgacaaatgtcgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacagttgtgtgtgagtt 27229510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 43753873 - 43753786
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||    
T  43753873 tcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagtt 43753786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 2146634 - 2146728
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    |||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||||    
T  2146634 ttgtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacagttgtgtgtg 2146728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 25112377 - 25112283
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    |||||| ||| |||||||||||||||||||| || ||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||    
T  25112377 ttgtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtg 25112283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 25546404 - 25546307
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||  ||||| |||||||||  ||||||||||||||||||||||||||    
T  25546404 tgtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtt 25546307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 8439087 - 8439171
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||| | |||||||||||||||||||||    
T  8439087 tcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacagttgtgtgtga 8439171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 4107324 - 4107405
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||| |||||||||||||||||||   |||| |||||||||| ||||||||||||||||||||||||||    
T  4107324 ctcaactggcaaatgccgaaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 4107405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 29484874 - 29484787
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||| |||| |||||||||||| |||| ||||||||    
T  29484874 tcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcacaattgtatgtgagtt 29484787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 5772935 - 5772851
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||| |||||||||| ||||||||||| |||||  ||||||| |||||||||||||  ||||||||||||||||||||||    
T  5772935 tagctcaacgggcaaatgccgaaattgcaaggtcggacaatgtgacccgggttcgaactcgaaacctcacagttgtgtgtgagtt 5772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 47250370 - 47250283
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||  |||| |||  |||||||||||||||    
T  47250370 tcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacctgggatctcttagttgtgtgtgagtt 47250283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 43203306 - 43203402
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||| | |||||||||||||| |||||| ||||| |||||  |||||| |||||||||| |||||||| |||||||||||||||||    
T  43203306 gtctagaagtcctagatgaactggcaaatgccgaaattgtaaggcgggacgccgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtt 43203402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 274 - 352
Target Start/End: Original strand, 41183833 - 41183911
Alignment:
Q  274 aactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||| |   ||||||||||| ||||||||||    
T  41183833 aactggcaaatgccgaaattgcaaggccggacgtcttgacctgggttcgaacccaatacctcacagttatgtgtgagtt 41183911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 11355834 - 11355919
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||||||  |||||||| ||||||||||| |||||||| ||| |||| ||||||| ||||| ||||||||||||||||||||    
T  11355834 ctagttcaactaacaaatgccgaaattgcaaggtcggacgttatgatctggattcgaacccgggatctcacagttgtgtgtgagtt 11355919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 28603026 - 28603107
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||| |||||||| || ||| ||||| |||| ||||||||    
T  28603026 ctcaactggcaaatgccgaaatcgcaaggccggacgtcgtgacctgagttcgaacccgagacttcacaattgtatgtgagtt 28603107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 38033744 - 38033825
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||| |||||| |||| ||||| |||||| | |||||| ||  ||||||||||||||||||||||||||    
T  38033744 ctcaactggcaaatgccgaaattgtaaggtcggacattgtgatccgggttcaaatccgggacctcacagttgtgtgtgagtt 38033825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 48146764 - 48146849
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||  ||||||  ||||||||||| | || || |||||| |||||||||| ||||||||||||||||||||||||||    
T  48146764 ctagctcaactgaaaaatgcagaaattgcaaggtcagatgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 48146849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 47570813 - 47570750
Alignment:
Q  289 aaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| ||||||||||||||||||||    
T  47570813 aaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtt 47570750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 4001953 - 4001880
Alignment:
Q  273 caactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    ||||||| ||||| | |||||||||||||||| || |||||| |||||||||||||||||||| ||| ||||||    
T  4001953 caactggaaaatgtcgaaattgcaaggccggatgtcgtgacccgggttcgaactcgggacctctcagctgtgtg 4001880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 10220601 - 10220504
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||| ||||||||||||| |||||||||| ||||| ||||||  ||| |||||||||||  ||  ||||||||||| ||||||||||    
T  10220601 tgtctagaagtcctaactcaactggcaaaagccaaaattgtaaggcaggacgtcatgatctgggttcgaatccgaaacctcacagttttgtgtgagtt 10220504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 42081735 - 42081655
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    |||||||||| |||||||||| ||||||||||||  || ||||||||| | |||||||||| | ||||||||||||||||||    
T  42081735 tcctagctcagctggcaaatgtcaaaattgcaagatcgaacgttgtgatccgggttcgaac-ctggacctcacagttgtgtg 42081655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 13887186 - 13887258
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgt 343  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||  ||||||||| ||| |||||||||||||    
T  13887186 ctcaactggcaaatgccgaacttgcaagaccggacgtcgtgacccaggttcgaacccggaacctcacagttgt 13887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 47557781 - 47557877
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| ||||||||| ||||||| ||||| ||||| || ||||  ||||| |||||||||| ||| ||||||||||||| ||||||||    
T  47557781 gtctagaagtcctaactcaactggtaaatgccgaaattacaaggtcgcacgtcatgacccgggttcgaacccggaacctcacagttgtatgtgagtt 47557877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 38781303 - 38781240
Alignment:
Q  289 aaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||| | || |||||| || ||||||| ||||||||||||||||||||||||||    
T  38781303 aaattgcaaggccgaatgtcgtgacccggattcgaacccgggacctcacagttgtgtgtgagtt 38781240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 39514078 - 39514015
Alignment:
Q  289 aaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||| |||||| | |||||||| |||||||| |||||| ||||||||||    
T  39514078 aaattgcaaggccggacgtcgtgacccgagttcgaacccgggaccttacagttatgtgtgagtt 39514015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 29255728 - 29255786
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    |||||||||||||||||||||||||||||||||  |||||| |||| | ||||||||||    
T  29255728 ctagctcaactggcaaatgccaaaattgcaaggttggacgtcgtgatccgggttcgaac 29255786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 47961085 - 47960987
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| || || ||||||| ||||||||||||||| ||||| | |||||  ||| | |||||||||| |||||||||  |||||||||||||||    
T  47961085 ttgtctagaagtcttaactcaacttgcaaatgccaaaattacaaggtcagacgtcatgaaccgggttcgaacccgggacctcgtagttgtgtgtgagtt 47960987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 48444282 - 48444184
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| ||||||||||||||  ||||||| |||||| ||| | |||||| |||| |||||||||||| | | || |||||||||||||| ||||    
T  48444282 ttgtctagaagtcctagctcaactgaaaaatgccgaaattgtaagactggacgtcgtgatctgggttcgaaccctgtacttcacagttgtgtgtaagtt 48444184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 5587291 - 5587376
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||||| |||||||||| |||||| | |||| | |||||||||| | |||||||||| ||  |||||||||    
T  5587291 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtt 5587376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 5592252 - 5592337
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||||| |||||||||| |||||| | |||| | |||||||||| | |||||||||| ||  |||||||||    
T  5592252 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtt 5592337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 15634995 - 15634911
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||| ||||||||| |||||| || | ||||||| |||||| || ||||||  ||| || |||||||||||||||||||    
T  15634995 tagctcaactagcaaatgccgaaattgtaaagtcggacgtcgtgacccggattcgaaaccggaacttcacagttgtgtgtgagtt 15634911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 32606460 - 32606373
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagtt 341  Q
    |||||| ||| | ||| |||||||| ||||| || ||||||||||||||||||| ||||||  ||||||||| || ||||| ||||||    
T  32606460 ttgtctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccaggttcgaacccgagaccttacagtt 32606373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 46427371 - 46427456
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||  |||||||||||||  ||||||  ||||  || ||||||  ||| ||||||||||||||||||||||    
T  46427371 ctagctcaactgacaaatatcaaaattgcaaggttggacgtcatgactcggattcgaatccggaacctcacagttgtgtgtgagtt 46427456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 27915710 - 27915612
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc-tgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||| ||||||||| ||||||  ||||||||||| ||||||| |||||| || ||||||||    || ||||||||||||| ||||||    
T  27915710 tgtctagaagtcctaactcaactggtaaatgctgaaattgcaaggtcggacgtcgtgaccttgagttcgaacctaagatctcacagttgtgtatgagtt 27915612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 314
Target Start/End: Original strand, 34763454 - 34763512
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 314  Q
    |||| ||| ||||||||||||||| ||||| | ||||||||||| ||||||| ||||||    
T  34763454 gtctagaagtcctagctcaactggaaaatgtcgaaattgcaagggcggacgtcgtgacc 34763512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 43171058 - 43171016
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgt 307  Q
    ||||| |||||||| |||||||| |||||||||||||||||||    
T  43171058 tcctaactcaactgacaaatgccgaaattgcaaggccggacgt 43171016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 7312573 - 7312512
Alignment:
Q  265 tcctagctcaactggcaaa-tgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    ||||||||||||||||||| |||||||||||  |||||||| ||  ||||| ||||||||||    
T  7312573 tcctagctcaactggcaaaatgccaaaattgttaggccggatgtcatgaccggggttcgaac 7312512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 25050071 - 25049990
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| | ||||||| |||||| |||| | ||||| ||||||||| || ||||||  || ||||||||||| ||||||||    
T  25050071 ctcaactagaaaatgccgaaattgaaaggtcagacgtcgtgacctggatttgaactcatgatctcacagttgtatgtgagtt 25049990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 35779625 - 35779529
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  35779625 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 35779529  T

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Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 32333113 - 32333210
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  32333113 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 32333210  T

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Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 1470 - 1372
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  1470 ttgtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacagttgtgtgtgagtt 1372  T

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Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 28817254 - 28817352
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  28817254 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacagttgtgtgtgagtt 28817352  T

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Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 6602646 - 6602550
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  6602646 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 6602550  T

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Target: chr8; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 6678099 - 6678003
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  6678099 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 6678003  T

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Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 7792661 - 7792757
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||||| ||||||||||||||||||||    
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgactcgggttcgaacccgggatctcacagttgtgtgtgagtt 7792757  T

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Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 42192768 - 42192671
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| | |||||||| ||||| ||||||||||||||||||||    
T  42192768 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacagttgtgtgtgagtt 42192671  T

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Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 70651 - 70555
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| |||| ||||||||||||||||||||||||||    
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacagttgtgtgtgagtt 70555  T

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Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 7813322 - 7813418
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||| |||||||||  |||||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||||||||    
T  7813322 gtctagaagtcctagctcaaccggcaaatgctgaaattgcaaggccggatgttgtgactcgggttcgaacccgggacctcacagttgtgtgtgagtt 7813418  T

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Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 39303318 - 39303405
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||| |||||| |||| || |||||||||||||||||||||||    
T  39303318 tcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacatgggtttgaacccgagacctcacagttgtgtgtgagtt 39303405  T

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Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 4531111 - 4531014
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||| ||||||||||| |||||||||||| ||||||  ||||| |||||||||| ||||||||||||| ||||||||||||    
T  4531111 tgtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacagctgtgtgtgagtt 4531014  T

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Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 39435293 - 39435378
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||| ||||||||||||| |||||||  ||| |||||||||||| || |||||||||||||||||||||||    
T  39435293 ctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatctgggttcgaacccgagacctcacagttgtgtgtgagtt 39435378  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 40911232 - 40911316
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||  ||||||||||||    
T  40911232 ctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaac-cgggacctcacaactgtgtgtgagtt 40911316  T

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Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 1078764 - 1078680
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| ||||||| |||||||||||||||||||  |||||  ||||||||| ||||||||||||||||||||||||||    
T  1078764 tagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacagttgtgtgtgagtt 1078680  T

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Target: chr8; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 9292018 - 9292114
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||| | |||||| || |||||||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  9292018 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaagccggacgttgtgacccgaattcgaactcgggacttcacagttgtgtgtgagtt 9292114  T

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Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 10963368 - 10963278
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||| ||||||||| |  ||||||||| ||||||||||||||||||||    
T  10963368 gtctagaagtcctagctcaactggcaaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacagttgtgtg 10963278  T

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Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 274 - 352
Target Start/End: Original strand, 42885192 - 42885270
Alignment:
Q  274 aactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||| ||||||||||||||||||||    
T  42885192 aactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtt 42885270  T

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Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 3822407 - 3822492
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| |||||||||||||||| |||||| |||| |||||||||||||| |||||||||| | ||| ||||||||||||||||||||    
T  3822407 ctagttcaactggcaaatgccgaaattgtaaggtcggacgttgtgacccgggttcgaacccaggatctcacagttgtgtgtgagtt 3822492  T

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Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 342
Target Start/End: Complemental strand, 12534846 - 12534760
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttg 342  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||| | ||| ||||||||||    
T  12534846 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagttg 12534760  T

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Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 41849360 - 41849263
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||| || ||  |||||||||||||||| ||||||||||| ||||||| |||| |||||||||||  ||| ||||||| ||||||||||||||    
T  41849360 tgtctggaagtcttaattcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtt 41849263  T

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Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 5385362 - 5385434
Alignment:
Q  280 caaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| |||||||||||| |||||| ||||||  ||||||||| ||||||||||||||||||||||||||    
T  5385362 caaatgccgaaattgcaaggctggacgtcgtgacccaggttcgaacccgggacctcacagttgtgtgtgagtt 5385434  T

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Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 352
Target Start/End: Original strand, 18386705 - 18386804
Alignment:
Q  253 attgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| ||| | |||||||||||| |||||||  ||||||||||| |||| ||  ||||  |||||||||| ||||||||||||||||||||||||||    
T  18386705 attgtctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgactcgggttcgaacccgggacctcacagttgtgtgtgagtt 18386804  T

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Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 45264768 - 45264672
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||| ||||||||||||||||| |||||||| || || |||| |||||  |||||||||| ||||||||||||||| ||||||||||    
T  45264768 tgtctagaagtcctaactcaactggcaaatgccgaaattgca-ggtcgaacgtcgtgactcgggttcgaacccgggacctcacagttttgtgtgagtt 45264672  T

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Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 31532220 - 31532157
Alignment:
Q  289 aaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||||||||||| || || ||||  |||||||||||||||||||||||||    
T  31532220 aaattgcaaggccggacgttgtgacccggatttgaaccggggacctcacagttgtgtgtgagtt 31532157  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 29425356 - 29425408
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgt 307  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  29425356 tgtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgt 29425408  T

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Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 349
Target Start/End: Complemental strand, 31969836 - 31969755
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    ||||| || ||||||||||| ||||| ||||||| |||||  ||| | |||||||||| |||||||||| ||||||||||||    
T  31969836 tagcttaattggcaaatgccgaaatttcaaggccagacgtcatgatccgggttcgaacacgggacctcaaagttgtgtgtga 31969755  T

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Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 348
Target Start/End: Original strand, 18752350 - 18752433
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    |||||| ||||||| ||||| || |||||| |||| ||||||| |||| | |||||||||| ||| |||| |||||||||||||    
T  18752350 tcctagttcaactgacaaataccgaaattgtaaggtcggacgtcgtgatcggggttcgaacccggaaccttacagttgtgtgtg 18752433  T

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Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 33731551 - 33731496
Alignment:
Q  297 aggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||||| |||||| |||||| ||||||||||||| ||||||||||||||||    
T  33731551 aggccagacgtcgtgacccgggttcaaactcgggacctcccagttgtgtgtgagtt 33731496  T

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Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 6099570 - 6099668
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| |||||| |||||| ||||||| | |||||||||||||||||||  ||||| | |||||||| ||  |||||||| ||| | |||||||    
T  6099570 ttgtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgacccgagttcgaacccgaaacctcacaattgcgcgtgagtt 6099668  T

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Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 20269554 - 20269598
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtga 312  Q
    ||||||||||||||||| || |||||| |||||||||||||||||    
T  20269554 tagctcaactggcaaataccgaaattgtaaggccggacgttgtga 20269598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 21056183 - 21056227
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtga 312  Q
    ||||||||||||||||| || |||||| |||||||||||||||||    
T  21056183 tagctcaactggcaaataccgaaattgtaaggccggacgttgtga 21056227  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 14400726 - 14400811
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| ||||| |  |||||||| || ||||||| || | |||| || |||| |||||||||||| ||||| |||||||    
T  14400726 ctagctcaactgacaaattctgaaattgcacggtcggacgtcgtaaactggatttgaacccgggacctcacaattgtgagtgagtt 14400811  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 5700768 - 5700708
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    ||||| ||||||||||||||||| ||||||  |||||||| | | ||||| ||||||||||    
T  5700768 tcctaactcaactggcaaatgccgaaattgttaggccggatgctatgaccggggttcgaac 5700708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 9775134 - 9775074
Alignment:
Q  292 ttgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||| |  | |||| |||||||||||| ||| ||||||||||| ||||||||||    
T  9775134 ttgcaaggccgaaaatcgtgatctgggttcgaacccggaacctcacagttatgtgtgagtt 9775074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 21018223 - 21018319
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 21018319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 35317826 - 35317729
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  35317826 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacagttgtgtgtgagtt 35317729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 13203957 - 13204053
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||    
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttatgtgtgagtt 13204053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 4825058 - 4824971
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||||    
T  4825058 tcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacagttgtgtgtgagtt 4824971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 1191670 - 1191572
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| ||||||||||||||||||||| | ||||||||||||||||||| |||| | |||||||||| |||||||||||| |||||||||||||    
T  1191670 ttgtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacaattgtgtgtgagtt 1191572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 12257356 - 12257452
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| | |||||||| | |||||||||||||    
T  12257356 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctcataattgtgtgtgagtt 12257452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 6021001 - 6021088
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||||| ||||||||| ||||||||||||||| |||||||||||| || ||||||| ||||||||| ||||||||||||||||    
T  6021001 tcctaactcaattggcaaatgtcaaaattgcaaggcctgacgttgtgacccggattcgaacccgggacctctcagttgtgtgtgagtt 6021088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 8734005 - 8734092
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||||  |||||||    
T  8734005 tcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctcacagttgtacgtgagtt 8734092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 9577089 - 9576993
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||  ||||||||||||| |||||  |||||||||||||||| | | ||||||||||||| ||||||||    
T  9577089 gtctagaagtcctagctcaactggcaaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacagttgtatgtgagtt 9576993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 27721430 - 27721524
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    ||||| ||| ||||||||||||||| ||||||| ||||||||| | ||||||| |||||| ||||| |||| ||||||||||||||||| |||||    
T  27721430 tgtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacagttgtatgtga 27721524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 40177622 - 40177720
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| |||||||| ||||| |||||| | ||||||||||||||||||||||||||||| ||| ||| ||| || |||| ||||||||||||||    
T  40177622 ttgtctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacctggattccaacccggaacttcaccgttgtgtgtgagtt 40177720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 32143535 - 32143472
Alignment:
Q  251 taattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 314  Q
    |||| |||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  32143535 taatagtctagaagtcatagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 32143472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 11124651 - 11124721
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| | |||||||    
T  11124651 tgtctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccttgattcgaac 11124721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 2970983 - 2971080
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||  ||||| | |||||| |||| | |||||||||||| ||||||||||  | |||||||||||||||||||||||    
T  2970983 tgtctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgacccgggttcgaacctgagacctcacagttgtgtgtgagtt 2971080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 31909480 - 31909417
Alignment:
Q  289 aaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||| |||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  31909480 aaattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 31909417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 29265875 - 29265971
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| ||||||| | ||||| | ||||| ||||| || | ||||||||| || ||||||| ||||||||||||||||||||||||||    
T  29265875 gtctagaagtcctaactcaactagaaaatgtcgaaattacaaggtcgaatgttgtgacccggattcgaacccgggacctcacagttgtgtgtgagtt 29265971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 3049173 - 3049094
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtg 344  Q
    |||||| ||||||  |||||||||||||||||||||||||||  |||||| |  ||| ||| ||||||||||||||||||    
T  3049173 tcctagttcaactcacaaatgccaaaattgcaaggccggacgccgtgacccgatttcaaacccgggacctcacagttgtg 3049094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 3387019 - 3386959
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    |||||| |||||||||||||||| ||||||||||||||||||| || | | ||||||||||    
T  3387019 tcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgttatccgggttcgaac 3386959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 21112049 - 21112145
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||| ||| |||||| | ||||||||||| |  |||| ||||||| |||||||||  ||||||||| |||||||| ||||||    
T  21112049 gtctagaagtcctagctcagctgacaaatgtcgaaattgcaaggacatacgtcgtgacctaggttcgaacctgggacctcaaagttgtgtttgagtt 21112145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 30127894 - 30127960
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcg 322  Q
    |||| ||| ||||||||||||| | ||||||| ||||||||||||||||| | |||||| |||||||    
T  30127894 gtctagaagtcctagctcaacttgtaaatgccgaaattgcaaggccggacatcgtgacccgggttcg 30127960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 17984861 - 17984774
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||  ||| | | ||||||||||   ||||||  ||||  |||||||||| ||| ||||||||||||||||||||||    
T  17984861 tcctagctcaactgaaaaaggtcgaaattgcaagattggacgtcctgactcgggttcgaacccggaacctcacagttgtgtgtgagtt 17984774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 28591469 - 28591382
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| || ||||||||||| |  ||||||||||||||||||| |||||  |||||| |||  |  ||||||||||||||| ||||||    
T  28591469 tcctaactaaactggcaaatactgaaattgcaaggccggacgtagtgactcgggttcaaacctgaaacctcacagttgtgtatgagtt 28591382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 45874055 - 45874151
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  45874055 gtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 45874151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 1173950 - 1174047
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  1173950 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagtt 1174047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 23417602 - 23417515
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||||||||    
T  23417602 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggactttacagttgtgtgtgagtt 23417515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 19849631 - 19849535
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||| ||||||||||||||||||||||||||    
T  19849631 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtt 19849535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 34739280 - 34739376
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  34739280 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 34739376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 28798518 - 28798420
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||    
T  28798518 ttgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtt 28798420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 43140023 - 43139938
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  43140023 ctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 43139938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 253 - 352
Target Start/End: Original strand, 53457821 - 53457920
Alignment:
Q  253 attgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||  ||||| |||||||||  ||||||||||||||||||||||||||    
T  53457821 attgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtt 53457920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 238 - 352
Target Start/End: Complemental strand, 26425003 - 26424890
Alignment:
Q  238 taaatataaaatataattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcac 337  Q
    ||||||||||| || |  |||| ||| ||||||||||||||||||||||| |||||||||||| ||||||  ||||| |||||||||| |||||||||||    
T  26425003 taaatataaaaaattagagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggc-ggacgtcatgacccgggttcgaacccgggacctcac 26424905  T
Q  338 agttgtgtgtgagtt 352  Q
    |||||||||||||||    
T  26424904 agttgtgtgtgagtt 26424890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 238587 - 238490
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| |||||||||||||| |||||||| |||||||||||| |||||   |||||||||||||||| ||||||||||||||||||||||||||    
T  238587 tgtctagaagtcctagctcaactgtcaaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacagttgtgtgtgagtt 238490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 12735442 - 12735527
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  12735442 ctagctcaactgacaaatgccaaaattgtaaggccagacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtt 12735527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 55214667 - 55214748
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||    
T  55214667 ctcaactgtcaaatgccaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtatgagtt 55214748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 54768560 - 54768464
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| | |||||||||||||||||| |||||    
T  54768560 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtgcgagtt 54768464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 18257328 - 18257425
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||| | |||||||| | |||||||||||||||||| |||||||    
T  18257328 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtt 18257425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 352
Target Start/End: Complemental strand, 29581176 - 29581075
Alignment:
Q  251 taattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgag 350  Q
    ||||||||  ||| ||||||||||| || || ||||| ||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||||||    
T  29581176 taattgtcaagaagtcctagctcaattgtcagatgccgaaattgcaaggccggacgtcgtgacctaggttcgaacccgagacctcacagttgtgtgtgag 29581077  T
Q  351 tt 352  Q
    ||    
T  29581076 tt 29581075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 22607994 - 22608081
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||| || ||| | ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||    
T  22607994 tcctagctcaactgacagatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtctgagtt 22608081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 11277981 - 11278070
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtg 344  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||| |  ||||| |||||| ||| ||||||||||||||||||    
T  11277981 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacagttgtg 11278070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 352
Target Start/End: Complemental strand, 19674062 - 19673961
Alignment:
Q  251 taattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgag 350  Q
    ||||||||| ||| || |||||||||||| |||||   |||||||||||||| |||||||||||||||||||||| |||||||||||| || |||| |||    
T  19674062 taattgtctagaagtcttagctcaactggtaaatgtagaaattgcaaggccgaacgttgtgacctgggttcgaacccgggacctcacaattatgtgcgag 19673963  T
Q  351 tt 352  Q
    ||    
T  19673962 tt 19673961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 3465761 - 3465842
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    ||||||||||||| ||||||  | |||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||    
T  3465761 tcctagctcaactagcaaatatcgaaattgcaaggccggacgttgtgatccaggttcgaactcgggacctcatagttgtgtg 3465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 352
Target Start/End: Original strand, 19814100 - 19814201
Alignment:
Q  251 taattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgag 350  Q
    ||||||| | ||| || |||||||||||||||||||  |||||| |||||||||||| ||||||||||||| |||  ||||||||||| || ||||||||    
T  19814100 taattgtttagaagtcttagctcaactggcaaatgcagaaattgtaaggccggacgtcgtgacctgggttcaaacctgggacctcacaattatgtgtgag 19814199  T
Q  351 tt 352  Q
    ||    
T  19814200 tt 19814201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 32441212 - 32441119
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    |||| ||| ||||||||||||||||||||| | ||||||||||||| ||| |  ||||| |||||||||| |||||||||||||||||| ||||    
T  32441212 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacagttgtgcgtga 32441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 19225268 - 19225355
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| |||||| || |||||||||  ||| | |||||||||| |||||||||||| ||||| |||||||    
T  19225268 tcctagctcaactggcaaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcacaattgtgcgtgagtt 19225355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 39807869 - 39807940
Alignment:
Q  281 aaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| ||||||||||||| ||| | |||||| | |||||||||||||||||||||||||||||||||||    
T  39807869 aaatgccgaaattgcaaggccagacatcgtgacccgagttcgaactcgggacctcacagttgtgtgtgagtt 39807940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 350
Target Start/End: Complemental strand, 2864876 - 2864782
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgag 350  Q
    |||| ||| ||||| ||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||   | |||||| |||||||||||||    
T  2864876 gtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctcagagttgtgtgtgag 2864782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 12867852 - 12867937
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||||| ||||||||||| ||||||| |||||| | ||||||||  |||| |||||||||||| |||||||    
T  12867852 ctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacagttgtgagtgagtt 12867937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 23858483 - 23858571
Alignment:
Q  261 gaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    |||||||||||||||||| ||||||  ||||||| ||||||| | ||||||| | |||||||||||| |||||||| ||||||| ||||    
T  23858483 gaattcctagctcaactgacaaatgttaaaattgtaaggccgtaagttgtgatccgggttcgaactcaggacctcatagttgtgagtga 23858571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 55400228 - 55400324
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| ||||||||| ||||||| |||||||||||||||||||  ||| | || ||||||||||| |||||| |||||| ||||||||    
T  55400228 gtctagaaatcctaactcaactggtaaatgccgaaattgcaaggccggacgtcatgatccggattcgaactcggaacctcatagttgtatgtgagtt 55400324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 12767086 - 12767183
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||| ||||||| |||||| |||  |||||||  ||| |||||||||||  ||  ||||||||||||||||||||||    
T  12767086 tgtctagaagtcctagctcaactggtaaatgccgaaattgtaagatcggacgtcatgatctgggttcgaatccgaaacctcacagttgtgtgtgagtt 12767183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 23710449 - 23710365
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| ||||| | ||||||||||||||||||| |||||| || |||||||  || |||||||||||  |||||||||    
T  23710449 tagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacagttacgtgtgagtt 23710365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 32778124 - 32778215
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    ||||| ||| || ||| ||||||| ||||| |||||||||||||| ||||||| |||| | |||||||||| || ||||||||| |||||||    
T  32778124 tgtctagaaatcatagatcaactgacaaataccaaaattgcaaggtcggacgtcgtgatccgggttcgaacacgagacctcacaattgtgtg 32778215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 2075538 - 2075601
Alignment:
Q  289 aaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||| |||||||  |||  ||||||||||| ||||||||||||||| ||||||||||    
T  2075538 aaattgcaagggcggacgtcatgatttgggttcgaacccgggacctcacagttatgtgtgagtt 2075601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 345
Target Start/End: Complemental strand, 22910371 - 22910296
Alignment:
Q  270 gctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgt 345  Q
    ||||||||| |||| | | ||||||||||| ||||||| |||||| ||||||||||  |||| |||||||||||||    
T  22910371 gctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgt 22910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 22968151 - 22968226
Alignment:
Q  270 gctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgt 345  Q
    ||||||||| |||| | | ||||||||||| ||||||| |||||| ||||||||||  |||| |||||||||||||    
T  22968151 gctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgt 22968226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 49030845 - 49030771
Alignment:
Q  277 tggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||| | ||||||||||||||||||| |||| | | |||||||| ||| |||||| |||||||||||||||    
T  49030845 tggcaaatgtcgaaattgcaaggccggacgtcgtgatccgagttcgaac-cggaacctcatagttgtgtgtgagtt 49030771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 352
Target Start/End: Original strand, 51287614 - 51287697
Alignment:
Q  269 agctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| ||||||||||||||| |||| | ||||| |||| |||||||  ||| ||  ||||||||||||||||||||||    
T  51287614 agctcagctgacaaatgccaaaattgtaaggtcagacgtcgtgatctgggtttaaacccgaaacctcacagttgtgtgtgagtt 51287697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 50033396 - 50033478
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggcc-ggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| |||||||| ||||||||| | | ||||||||||||| ||||||||||  | ||| |||||||||||||| ||||    
T  50033396 ctcaactgtcaaatgccgaaattgcaaagactggacgttgtgacccgggttcgaacatgagacatcacagttgtgtgtaagtt 50033478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 2804539 - 2804591
Alignment:
Q  273 caactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    |||||| ||||||| ||||||| |||| |||||||||||||| ||||||||||    
T  2804539 caactgacaaatgctaaaattgtaaggtcggacgttgtgacccgggttcgaac 2804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 37134048 - 37134144
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||| |||||||||||||||  ||||| ||||| |||| ||  ||| | |||||||||| ||  || |||||||||||||||||||    
T  37134048 gtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacccgaaacttcacagttgtgtgtgagtt 37134144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 39284694 - 39284634
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaac 325  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||  ||||| ||||||||||    
T  39284694 tcctagctcaactggcaaatgccgaaattgttaggccggatgtcatgaccggggttcgaac 39284634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 1966611 - 1966646
Alignment:
Q  317 ggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| |||||||||||||||||||||||||||    
T  1966611 ggttcgaattcgggacctcacagttgtgtgtgagtt 1966646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 23839859 - 23839955
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  23839859 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacagttgtgtgtgagtt 23839955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 26605624 - 26605717
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  26605624 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtga 26605717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 45125294 - 45125197
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  45125294 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacttgggttcgaactcggaacctcacagttgtgtgtgagtt 45125197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 238 - 352
Target Start/End: Complemental strand, 33083700 - 33083586
Alignment:
Q  238 taaatataaaatataattgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcac 337  Q
    |||| |||||||| | | |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| |||||||||||    
T  33083700 taaaaataaaataaattggtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcac 33083601  T
Q  338 agttgtgtgtgagtt 352  Q
    |||||||||||||||    
T  33083600 agttgtgtgtgagtt 33083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 10639735 - 10639638
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  10639735 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 10639638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 34460367 - 34460465
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| | | ||||||||||||||||||||||    
T  34460367 ttgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagtt 34460465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 11708677 - 11708770
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    ||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  11708677 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtg 11708770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 37197726 - 37197642
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  37197726 tagctcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 37197642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 11816670 - 11816583
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||    
T  11816670 tcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagtt 11816583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 11459714 - 11459807
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||  ||||| |||||||||| ||||||||||||||||||||||    
T  11459714 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtg 11459807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 19537306 - 19537399
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||||    
T  19537306 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtg 19537399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 29659347 - 29659250
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||||| |  |||||||||||||||||||||||    
T  29659347 tgtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccgaacattgtgacccgggttcgaacccatgacctcacagttgtgtgtgagtt 29659250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 352
Target Start/End: Original strand, 19816217 - 19816316
Alignment:
Q  253 attgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| ||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||| ||| ||||| ||||||||| ||||||    
T  19816217 attgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgacccgggtttgaacccggaacctcgcagttgtgtatgagtt 19816316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 19048754 - 19048850
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  ||| | |||||||||| |||||||||||| |||||||||||||    
T  19048754 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtt 19048850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 39535663 - 39535566
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||| ||||||| ||||||| | ||||||||||||||||||| |||||| |||||||||| ||||||||||||||| | ||||||||    
T  39535663 tgtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttttatgtgagtt 39535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 352
Target Start/End: Original strand, 4851317 - 4851416
Alignment:
Q  253 attgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||| ||| |||||||||||||| ||| |||| |||||| || ||||||||| |||| | |||||| ||| ||||||||||||||||||||||||||    
T  4851317 attgtcttgaagtcctagctcaactgtcaattgccgaaattgtaaagccggacgtcgtgatccgggttcaaacccgggacctcacagttgtgtgtgagtt 4851416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 39831562 - 39831476
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||||||||||| || |||||||||||||||||||  ||| | |||||||||| |||||||||||| |||||||||||||    
T  39831562 tcctagctcaactggcaaataccgaaattgcaaggccggacgtcatgatccgggttcgaac-cgggacctcacaattgtgtgtgagtt 39831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 25501902 - 25501832
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctc 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||| ||| |||||    
T  25501902 tcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctc 25501832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 34234530 - 34234620
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||| |||| ||||||| ||| ||| |||| || ||||||| |||||||||    
T  34234530 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggatgttgtgatctgagtttgaacccgagacctcatagttgtgtg 34234620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 16654372 - 16654459
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||||||||  ||||||| ||||||||||||||||||  |||| | | |||||||| ||| ||||||||||||||||||||||    
T  16654372 tcctaactcaactgataaatgccgaaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacagttgtgtgtgagtt 16654459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 346
Target Start/End: Original strand, 21312216 - 21312295
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    ||||||||| ||||||||| |||||||| ||| ||||||||||||| ||||| ||||||  ||||||||||| |||||||    
T  21312216 ctagctcaattggcaaatgtcaaaattgtaagaccggacgttgtgatctgggatcgaacctgggacctcacaattgtgtg 21312295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 4800887 - 4800972
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||| |||||||| | |||||||||||| |||||| |||||||| |||||||| ||| ||||| | ||| ||||||||||    
T  4800887 ctagctcaaccggcaaatgtcgaaattgcaaggctggacgtcgtgacctgagttcgaacccggaacctcgcggttatgtgtgagtt 4800972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 7276016 - 7275923
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaa-tgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgt 347  Q
    ||||| ||| ||||| |||||||| |||| |||| ||||||||||| |||| || ||| || |||||||||| |||||||||||||||||||||    
T  7276016 tgtctagaagtcctaactcaactgacaaaatgccgaaattgcaaggtcggatgtcgtggcccgggttcgaacccgggacctcacagttgtgtgt 7275923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 27138045 - 27137950
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||| |||||||  |||||| ||||||| || | ||||||||||||||||| |||||||| |||||| | ||||||||    
T  27138045 gtctagaagtcctagctcaactgacaaatgctgaaattg-aaggccgaacatcgtgacctgggttcgaacccgggaccttacagttttatgtgagtt 27137950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 45202000 - 45201904
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| ||||| ||||||||| | |||||| |||| ||| ||| |||| | | |||||||||||| ||||||||||||||||||||||    
T  45202000 gtctagaagtcctaactcaattggcaaatgtcgaaattgtaaggtcggtcgtcgtgatccgagttcgaactcggaacctcacagttgtgtgtgagtt 45201904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 43684078 - 43684165
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| |||||||| |||||||| |||||||||||||||||    |||| ||||||||||| ||||||| |||| || ||||||||||    
T  43684078 tcctatctcaactgacaaatgccgaaattgcaaggccggacaccatgacatgggttcgaacccgggaccccacaattatgtgtgagtt 43684165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 351
Target Start/End: Original strand, 42025679 - 42025765
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagt 351  Q
    |||||||||||||| |||||| | |||||  ||||||||| || |||||||| |||||||| | | |||||||| ||||||||||||    
T  42025679 tcctagctcaactgacaaatgtcgaaattttaaggccggatgtcgtgacctgagttcgaacccagaacctcacaattgtgtgtgagt 42025765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 40786322 - 40786241
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||  |||||||||    |||||| |||||| |||||||||    
T  40786322 ctcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccctggttcgaacctaagacctcgcagttgagtgtgagtt 40786241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 6055124 - 6055037
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||| || |||||||||||||||||||| || |||| || |   || ||||||||| |||||||| || ||||||||||||    
T  6055124 tcctagctcaattgacaaatgccaaaattgcaaggtcgaacgtcgtaattcggattcgaactcaggacctcatagctgtgtgtgagtt 6055037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 42578180 - 42578231
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgt 307  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  42578180 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgt 42578231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 38440312 - 38440267
Alignment:
Q  269 agctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 314  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||    
T  38440312 agctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacc 38440267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 43778581 - 43778500
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| ||||| || ||||||||| |||| | || |||||||||||||||||    ||| |||||||||||||||||||    
T  43778581 ctcaactgacaaataccgaaattgcaaagccgaatgtcgtgacctgggttcgaacctaagacttcacagttgtgtgtgagtt 43778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 15782599 - 15782674
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagt 340  Q
    ||||||||||| || |||||||| |||||| |||| |||||||  ||||| |||||||||| || ||||| |||||    
T  15782599 tcctagctcaattgacaaatgccgaaattgtaaggtcggacgtcatgacccgggttcgaacccgagaccttacagt 15782674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 307
Target Start/End: Complemental strand, 32844689 - 32844654
Alignment:
Q  272 tcaactggcaaatgccaaaattgcaaggccggacgt 307  Q
    |||||||||||||||| |||||||||||||||||||    
T  32844689 tcaactggcaaatgccgaaattgcaaggccggacgt 32844654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 33001712 - 33001798
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| |||||||||||||||   |||||| ||| | | |||||||||| ||||||||||| | ||||||||||||| | ||||||||    
T  33001712 tcctaactcaactggcaaatgttgaaattgtaagactgaacgttgtgac-tgggttcgaacacaggacctcacagttatatgtgagtt 33001798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 7349113 - 7349194
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||  | ||||||||||||||||| |||| | | |||||||  || |||||||||  | ||||||||||    
T  7349113 ctcaactggcaaatgctgatattgcaaggccggacgtcgtgatccgagttcgaatccgagacctcacaactatgtgtgagtt 7349194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 12366743 - 12366824
Alignment:
Q  271 ctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||  |||| ||||||||| |||| | ||| |||||| | || ||| ||| ||| ||||||||||||||||||||||    
T  12366743 ctcaactgataaataccaaaattgtaaggtcagacattgtgatccggattcaaacccggaacctcacagttgtgtgtgagtt 12366824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 56481 - 56577
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  56481 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 56577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 33621492 - 33621590
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  33621492 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 33621590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 33704216 - 33704312
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  33704216 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 33704312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 21000692 - 21000784
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtg 348  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||| |||||||||||| |||||||||    
T  21000692 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcacaattgtgtgtg 21000784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 21037302 - 21037386
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||    
T  21037302 ctagctcaactggcaaatgctgaaattgcaaggccggacgttgtgactcgggttcgaa-tccggacctcacagttgtgtgtgagtt 21037386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 28322932 - 28323028
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  ||| | |||||||||| |||||||||||| |||||||||||||    
T  28322932 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtt 28323028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 11572008 - 11572104
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||  |||||||  |||||| |||||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  11572008 gtctagaagtcctagctcaactaacaaatgcagaaattgtaaggccagacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 11572104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 35218756 - 35218698
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 314  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35218756 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 35218698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 2959148 - 2959245
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| ||||| ||||||| ||||||||| ||||||||||||||||  | ||||| | ||||||||| || |||||||||||||||||||||||    
T  2959148 tgtctagaagtcctaactcaactagcaaatgccgaaattgcaaggccggatatcgtgacttaggttcgaacccgagacctcacagttgtgtgtgagtt 2959245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 4464138 - 4464223
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||||||| |||||||| |||||||||||||||||||  ||| | ||||||||||  |||||||||||||||||||||||||    
T  4464138 ctagttcaactgacaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacagttgtgtgtgagtt 4464223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 16518448 - 16518513
Alignment:
Q  281 aaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||    
T  16518448 aaatgccaaaattgcaaggtcggacgttgtgacctgggttcgaacccaggagctcacagttgtgtg 16518513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 33255498 - 33255578
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtg 346  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||| ||||||| ||||||||  |||||||||||||||||||    
T  33255498 tcctagctcagctggcaaatgccaaaattgtaaggctggacgtt-tgacctgagttcgaacctgggacctcacagttgtgtg 33255578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 361010 - 361107
Alignment:
Q  255 tgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||| || ||||||| ||||||||||||||||||||||||||| || | |||||  |||||||||| ||| ||||||||||| | ||||||||    
T  361010 tgtctagaagtcttagctcatctggcaaatgccaaaattgcaaggccgaacatcgtgacacgggttcgaacccggaacctcacagttatatgtgagtt 361107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 12252023 - 12252119
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||| ||||| || | |||||||| ||||| || |||||| ||||| |||| || ||||||| |||||||||||||||    
T  12252023 gtctagaagtcctagctcaactgacaaataccgagattgcaagaccggatgtcgtgaccagggtttgaacccgagacctcatagttgtgtgtgagtt 12252119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 32289363 - 32289441
Alignment:
Q  273 caactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||| |||||||||| ||||| ||||||| | |  |||||||||| |||||||||||||||||| ||||    
T  32289363 caactggcaaatgccgaaattgcaag-ccggatgttgtgatccgaattcgaactcgagacctcacagttgtgtgtaagtt 32289441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 32354059 - 32353973
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||| ||||| || ||||||||||||||  |||| |||||||||||||  || |||||||| ||||| |||||||||||||||||||    
T  32354059 tcctaactcaattgacaaatgccaaaattcaaaggtcggacgttgtgactcggattcgaact-gggacttcacagttgtgtgtgagtt 32353973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 352
Target Start/End: Complemental strand, 584897 - 584816
Alignment:
Q  270 gctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||| ||||||||| |||||||||||| |||||| |||||| || |||||| ||||||||||||| || | ||||||||    
T  584897 gctcaactagcaaatgccgaaattgcaaggc-ggacgtcgtgacccggattcgaattcgggacctcacaattttatgtgagtt 584816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 24619207 - 24619111
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||| |||||||| |||||| |||||||| ||||||| |||| |||||| | |||||| | || ||||||| | |||||||||||||    
T  24619207 gtctagaagtcctaactcaactgacaaatgtcaaaattgtaaggccgaacgtcgtgacccgagttcgatcccgtgacctcataattgtgtgtgagtt 24619111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 10226620 - 10226540
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctca 336  Q
    |||| ||| |||||||||||||||||||| || ||||| ||| || |||| | |||||  |||||||||| ||||||||||    
T  10226620 gtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 10226540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 28592246 - 28592186
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 314  Q
    |||||| ||| |||||||| |||||||||||||| |||||  ||||| |||||||||||||    
T  28592246 ttgtctagaagtcctagcttaactggcaaatgccgaaattataaggctggacgttgtgacc 28592186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 352
Target Start/End: Original strand, 14495642 - 14495725
Alignment:
Q  269 agctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||  |||||||| |||||||||| | | ||||||| | ||| |||| |||||| |||  ||||||||||||||||||    
T  14495642 agctcaactaacaaatgccgaaattgcaagactgaacgttgtaatctgagttcaaactcgagactacacagttgtgtgtgagtt 14495725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 19145489 - 19145563
Alignment:
Q  274 aactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtga 349  Q
    |||| ||||||||  ||||||||||||||||||| ||||||  | || |||| |||||||||||| ||||||||||    
T  19145489 aactagcaaatgctgaaattgcaaggccggacgtcgtgacc-cgttttgaacccgggacctcacaattgtgtgtga 19145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 29009769 - 29009682
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||| ||||| | |||||||  || ||| ||||||||||||  ||||| |  |||||||  |||||||||||||||||||||||||    
T  29009769 tcctagttcaacggacaaatgctgaagttgtaaggccggacgtcatgacccgaattcgaacctgggacctcacagttgtgtgtgagtt 29009682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 17590443 - 17590394
Alignment:
Q  303 gacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||  |||||||||| |||  |||||||||||||||||||||    
T  17590443 gacgttgtgactcgggttcgaacccggagcctcacagttgtgtgtgagtt 17590394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 5598891 - 5598847
Alignment:
Q  268 tagctcaactggcaaatgccaaaattgcaaggccggacgttgtga 312  Q
    ||||||||||| |||||| ||||||||||||||| ||||| ||||    
T  5598891 tagctcaactgacaaatgtcaaaattgcaaggccagacgtcgtga 5598847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 341
Target Start/End: Complemental strand, 7197925 - 7197849
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagtt 341  Q
    ||||||||||| || ||||||||||||||| || |  ||||||  ||||| | |||||||| |||||||| ||||||    
T  7197925 tcctagctcaattgacaaatgccaaaattgtaaagttggacgtcttgacccgagttcgaacccgggaccttacagtt 7197849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 14939146 - 14939190
Alignment:
Q  254 ttgtctggaattcctagctcaactggcaaatgccaaaattgcaag 298  Q
    |||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  14939146 ttgtctagaagtcctaactcaactggcaaatgccgaaattgcaag 14939190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 990 - 894
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 14079 - 13983
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  14079 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtt 13983  T

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Target: scaffold0119; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 19759 - 19663
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| |||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  19759 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtt 19663  T

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Target: scaffold0044 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 10101 - 10005
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| |||||||||| |||||||||||||||    
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcatagttgtgtgtgagtt 10005  T

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Target: scaffold0038 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 114252 - 114348
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  ||| | |||||||||| |||||||||||| |||||||||||||    
T  114252 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtt 114348  T

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Target: scaffold0067 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 34827 - 34914
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||  | ||||||| ||||||| ||||||||    
T  34827 tcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctcgcagttgtatgtgagtt 34914  T

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Target: scaffold0053 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 22174 - 22259
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    |||||||||||| |||||||| |||||| |||||||||||| |||||| |||||||| | |||||||||||||||| |||||||||    
T  22174 ctagctcaactgacaaatgccgaaattgtaaggccggacgtcgtgacccgggttcgagcccgggacctcacagttgcgtgtgagtt 22259  T

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Target: scaffold0352 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 9060 - 8975
Alignment:
Q  267 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacagttgtgtgtgagtt 352  Q
    ||||||||||||| ||||||| |||||| ||||| ||||||| |||   ||||||||||   ||||||||||||||||||||||||    
T  9060 ctagctcaactggtaaatgccgaaattgtaaggcgggacgttatgattcgggttcgaacctaggacctcacagttgtgtgtgagtt 8975  T

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Target: scaffold0360 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 14504 - 14578
Alignment:
Q  265 tcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctcacag 339  Q
    ||||||| || ||| |||||| | ||||||||||||||||||| |||| | |||||||||| |||||||||||||    
T  14504 tcctagcacagctgacaaatgtcgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacag 14578  T

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Target: scaffold0495 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 3339 - 3259
Alignment:
Q  256 gtctggaattcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaactcgggacctca 336  Q
    |||| ||| |||||||||||||||||||| || ||||| ||| || |||| | |||||  |||||||||| ||||||||||    
T  3339 gtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 3259  T

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