View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15080_low_19 (Length: 249)

Name: NF15080_low_19
Description: NF15080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15080_low_19
NF15080_low_19
[»] chr3 (75 HSPs)
chr3 (1-128)||(51255080-51255207)
chr3 (1-128)||(46819941-46820070)
chr3 (1-128)||(21654136-21654266)
chr3 (1-128)||(1335002-1335131)
chr3 (1-119)||(16739263-16739383)
chr3 (3-128)||(45781290-45781418)
chr3 (1-128)||(13541169-13541298)
chr3 (1-128)||(23513459-23513588)
chr3 (1-128)||(26641211-26641340)
chr3 (1-128)||(55400630-55400759)
chr3 (3-128)||(31126106-31126233)
chr3 (1-128)||(43575850-43575978)
chr3 (3-128)||(46580430-46580557)
chr3 (1-128)||(53020074-53020204)
chr3 (1-128)||(32322338-32322467)
chr3 (4-123)||(51426512-51426635)
chr3 (3-128)||(28793055-28793183)
chr3 (3-128)||(37324183-37324314)
chr3 (1-108)||(34022513-34022622)
chr3 (1-128)||(36189105-36189234)
chr3 (40-128)||(46296176-46296266)
chr3 (3-128)||(52172109-52172235)
chr3 (1-69)||(45347828-45347896)
chr3 (74-126)||(52252003-52252055)
chr3 (8-123)||(22456109-22456227)
chr3 (5-107)||(2927171-2927276)
chr3 (8-123)||(22479155-22479273)
chr3 (1-67)||(33974738-33974804)
chr3 (2-128)||(23209376-23209505)
chr3 (1-123)||(38401272-38401397)
chr3 (75-128)||(49068019-49068072)
chr3 (6-77)||(14752377-14752448)
chr3 (1-123)||(10251903-10252028)
chr3 (189-234)||(32322232-32322277)
chr3 (189-234)||(51309495-51309540)
chr3 (189-238)||(52252118-52252167)
chr3 (189-233)||(26641106-26641150)
chr3 (3-75)||(49067007-49067079)
chr3 (3-123)||(21214135-21214258)
chr3 (25-123)||(2994519-2994620)
chr3 (189-234)||(21654327-21654372)
chr3 (189-234)||(45347706-45347751)
chr3 (189-234)||(55400820-55400865)
chr3 (189-229)||(1335192-1335232)
chr3 (190-234)||(16739153-16739197)
chr3 (13-69)||(46557379-46557435)
chr3 (23-120)||(49583879-49583979)
chr3 (189-228)||(46296076-46296115)
chr3 (28-123)||(34194807-34194905)
chr3 (193-239)||(51255272-51255318)
chr3 (1-123)||(10114804-10114928)
chr3 (189-234)||(28793244-28793289)
chr3 (189-234)||(31126294-31126339)
chr3 (189-234)||(34022681-34022726)
chr3 (6-67)||(36546457-36546518)
chr3 (6-67)||(36561797-36561858)
chr3 (189-234)||(43576039-43576084)
chr3 (189-234)||(45781479-45781524)
chr3 (25-69)||(11054454-11054498)
chr3 (8-76)||(34105443-34105510)
chr3 (189-233)||(53020265-53020309)
chr3 (6-69)||(579326-579389)
chr3 (6-77)||(28875290-28875361)
chr3 (23-69)||(7866660-7866706)
chr3 (201-238)||(26724977-26725014)
chr3 (24-69)||(37074860-37074905)
chr3 (189-238)||(37075049-37075098)
chr3 (189-234)||(46580618-46580662)
chr3 (24-69)||(46711836-46711881)
chr3 (8-76)||(51309323-51309391)
chr3 (4-69)||(51311554-51311618)
chr3 (189-234)||(51426701-51426746)
chr3 (25-69)||(23311739-23311783)
chr3 (4-56)||(26207716-26207768)
chr3 (189-233)||(49068133-49068177)
[»] chr2 (68 HSPs)
chr2 (1-128)||(21539648-21539777)
chr2 (1-128)||(38549779-38549908)
chr2 (2-128)||(33635228-33635356)
chr2 (1-128)||(792492-792621)
chr2 (1-128)||(15858746-15858875)
chr2 (3-128)||(8784288-8784415)
chr2 (3-128)||(29514155-29514282)
chr2 (1-128)||(28492411-28492540)
chr2 (1-120)||(29514619-29514739)
chr2 (2-128)||(4033811-4033939)
chr2 (1-123)||(28424166-28424289)
chr2 (3-128)||(43075643-43075770)
chr2 (1-128)||(4091901-4092031)
chr2 (3-128)||(5091676-5091805)
chr2 (1-115)||(10979083-10979198)
chr2 (2-128)||(35832304-35832432)
chr2 (3-128)||(10478068-10478198)
chr2 (3-128)||(43451409-43451525)
chr2 (29-128)||(14565509-14565611)
chr2 (34-128)||(44803823-44803918)
chr2 (40-128)||(22162249-22162340)
chr2 (5-69)||(29524258-29524322)
chr2 (6-77)||(19263979-19264050)
chr2 (189-234)||(792386-792431)
chr2 (189-234)||(4092092-4092137)
chr2 (1-76)||(13822949-13823026)
chr2 (189-234)||(14565403-14565448)
chr2 (3-128)||(15068639-15068755)
chr2 (189-234)||(21539838-21539883)
chr2 (8-128)||(18834046-18834170)
chr2 (23-120)||(38070912-38071012)
chr2 (23-107)||(25571941-25572029)
chr2 (3-123)||(26998214-26998336)
chr2 (5-107)||(8701480-8701585)
chr2 (189-234)||(10979250-10979295)
chr2 (25-123)||(20380041-20380142)
chr2 (1-123)||(32009996-32010121)
chr2 (189-234)||(35832493-35832538)
chr2 (43-116)||(38071586-38071666)
chr2 (189-234)||(38549673-38549718)
chr2 (189-234)||(44803979-44804024)
chr2 (189-233)||(10478259-10478303)
chr2 (5-107)||(18454944-18455048)
chr2 (193-233)||(28492605-28492645)
chr2 (6-69)||(6110387-6110450)
chr2 (6-69)||(33198852-33198915)
chr2 (23-123)||(44442049-44442150)
chr2 (189-234)||(4033705-4033750)
chr2 (189-234)||(8784476-8784521)
chr2 (189-234)||(15068816-15068861)
chr2 (189-234)||(18833940-18833985)
chr2 (189-226)||(28424352-28424389)
chr2 (189-234)||(43451586-43451631)
chr2 (1-69)||(11031121-11031187)
chr2 (23-120)||(32273587-32273687)
chr2 (6-69)||(5280698-5280761)
chr2 (6-69)||(28858189-28858252)
chr2 (23-69)||(45660259-45660305)
chr2 (75-128)||(9294622-9294675)
chr2 (189-234)||(13822800-13822845)
chr2 (189-234)||(29514049-29514094)
chr2 (189-234)||(29514505-29514550)
chr2 (83-128)||(33933055-33933100)
chr2 (201-238)||(38071476-38071513)
chr2 (8-76)||(12872034-12872101)
chr2 (25-69)||(28599335-28599379)
chr2 (189-233)||(33635417-33635461)
chr2 (25-69)||(41528186-41528230)
[»] chr4 (70 HSPs)
chr4 (2-128)||(50768334-50768462)
chr4 (1-127)||(55937807-55937935)
chr4 (1-128)||(52712951-52713080)
chr4 (3-128)||(37788341-37788468)
chr4 (1-128)||(29899603-29899732)
chr4 (1-128)||(32012430-32012559)
chr4 (1-128)||(38940757-38940886)
chr4 (2-128)||(53677582-53677710)
chr4 (1-128)||(29180515-29180644)
chr4 (1-128)||(30776587-30776716)
chr4 (1-128)||(30777375-30777504)
chr4 (1-128)||(38187829-38187958)
chr4 (1-128)||(27750451-27750580)
chr4 (1-128)||(39970092-39970221)
chr4 (1-128)||(1619917-1620046)
chr4 (1-128)||(3043270-3043399)
chr4 (1-128)||(10591606-10591734)
chr4 (1-128)||(43980387-43980515)
chr4 (1-123)||(9798183-9798307)
chr4 (4-128)||(49901917-49902044)
chr4 (40-128)||(51495079-51495166)
chr4 (2-128)||(5222396-5222529)
chr4 (8-128)||(30012055-30012178)
chr4 (1-123)||(23978250-23978375)
chr4 (189-234)||(29180409-29180454)
chr4 (75-128)||(47807159-47807212)
chr4 (23-128)||(8013219-8013327)
chr4 (6-69)||(39078035-39078098)
chr4 (5-107)||(48793797-48793901)
chr4 (189-234)||(10591500-10591545)
chr4 (189-234)||(30776481-30776526)
chr4 (189-234)||(37788529-37788574)
chr4 (189-234)||(39969986-39970031)
chr4 (2-75)||(47806787-47806860)
chr4 (189-234)||(53677476-53677521)
chr4 (1-69)||(17186993-17187061)
chr4 (6-77)||(16605038-16605109)
chr4 (23-123)||(37911798-37911901)
chr4 (8-123)||(53848366-53848484)
chr4 (189-234)||(29899793-29899838)
chr4 (189-234)||(30777565-30777610)
chr4 (5-107)||(35310913-35311018)
chr4 (189-234)||(38940947-38940992)
chr4 (25-119)||(47516330-47516427)
chr4 (189-234)||(47807273-47807318)
chr4 (189-245)||(3043153-3043209)
chr4 (1-69)||(8178431-8178498)
chr4 (25-69)||(41414789-41414833)
chr4 (5-69)||(42915406-42915470)
chr4 (189-233)||(50768523-50768567)
chr4 (6-69)||(14332668-14332731)
chr4 (189-234)||(9798072-9798117)
chr4 (193-234)||(17236293-17236334)
chr4 (189-234)||(28681737-28681782)
chr4 (8-69)||(35529551-35529612)
chr4 (193-238)||(52713137-52713182)
chr4 (23-68)||(55580562-55580607)
chr4 (25-69)||(2229175-2229219)
chr4 (25-69)||(26916253-26916297)
chr4 (23-120)||(28318555-28318655)
chr4 (24-69)||(5841971-5842016)
chr4 (189-234)||(30011951-30011996)
chr4 (189-234)||(32012324-32012369)
chr4 (189-234)||(43980576-43980621)
chr4 (189-238)||(49902105-49902154)
chr4 (193-234)||(55937700-55937741)
chr4 (197-233)||(5222291-5222327)
chr4 (24-56)||(24940281-24940313)
chr4 (23-123)||(28142756-28142860)
chr4 (25-69)||(47867807-47867851)
[»] chr8 (75 HSPs)
chr8 (1-128)||(24612618-24612747)
chr8 (1-128)||(25321724-25321853)
chr8 (1-128)||(11043951-11044080)
chr8 (1-128)||(27752480-27752609)
chr8 (1-128)||(33851161-33851290)
chr8 (1-128)||(36537952-36538081)
chr8 (1-123)||(35259951-35260075)
chr8 (3-128)||(32678647-32678774)
chr8 (4-128)||(27621027-27621153)
chr8 (1-128)||(44052514-44052644)
chr8 (1-128)||(37597964-37598093)
chr8 (3-128)||(3099848-3099976)
chr8 (3-128)||(35346442-35346569)
chr8 (1-128)||(35344260-35344390)
chr8 (1-128)||(11992621-11992751)
chr8 (1-128)||(44411347-44411477)
chr8 (2-128)||(39187129-39187256)
chr8 (43-128)||(44358629-44358716)
chr8 (2-123)||(17713116-17713240)
chr8 (51-128)||(37567569-37567648)
chr8 (8-76)||(24510876-24510944)
chr8 (76-128)||(31133167-31133219)
chr8 (5-85)||(31133765-31133847)
chr8 (21-115)||(16635489-16635585)
chr8 (2-128)||(40487803-40487939)
chr8 (7-128)||(12108069-12108192)
chr8 (15-123)||(2238736-2238835)
chr8 (5-69)||(35525475-35525539)
chr8 (6-77)||(34890385-34890456)
chr8 (1-128)||(5217284-5217414)
chr8 (25-123)||(8673298-8673398)
chr8 (189-238)||(27621214-27621263)
chr8 (189-234)||(27752670-27752715)
chr8 (3-69)||(4047113-4047180)
chr8 (21-85)||(16635353-16635419)
chr8 (23-69)||(13144180-13144226)
chr8 (189-234)||(3100037-3100082)
chr8 (189-234)||(11044141-11044186)
chr8 (189-234)||(11992812-11992857)
chr8 (25-123)||(26954535-26954636)
chr8 (189-234)||(31133061-31133106)
chr8 (189-234)||(35260141-35260186)
chr8 (189-234)||(35344451-35344496)
chr8 (189-234)||(37567463-37567508)
chr8 (189-234)||(37598153-37598198)
chr8 (189-234)||(41426423-41426468)
chr8 (189-238)||(44411237-44411286)
chr8 (88-128)||(34713511-34713551)
chr8 (6-69)||(7858437-7858500)
chr8 (21-85)||(16635621-16635687)
chr8 (6-69)||(24892716-24892779)
chr8 (189-232)||(32678543-32678586)
chr8 (189-232)||(33851057-33851100)
chr8 (189-234)||(24612512-24612557)
chr8 (189-234)||(25321618-25321663)
chr8 (189-234)||(35346336-35346381)
chr8 (201-234)||(44052717-44052750)
chr8 (25-69)||(7022591-7022635)
chr8 (47-123)||(16643188-16643267)
chr8 (2-69)||(41809022-41809090)
chr8 (6-69)||(8711754-8711817)
chr8 (26-69)||(38072114-38072157)
chr8 (23-69)||(13143659-13143705)
chr8 (23-69)||(36190666-36190712)
chr8 (26-68)||(41362846-41362888)
chr8 (189-238)||(13143847-13143896)
chr8 (189-238)||(15824665-15824714)
chr8 (189-238)||(29920296-29920345)
chr8 (189-234)||(40486524-40486569)
chr8 (8-49)||(41426190-41426231)
chr8 (201-234)||(44358523-44358556)
chr8 (198-238)||(12108248-12108288)
chr8 (21-123)||(16635757-16635860)
chr8 (1-69)||(17314723-17314790)
chr8 (75-123)||(41362450-41362497)
[»] chr7 (83 HSPs)
chr7 (1-128)||(36576308-36576437)
chr7 (1-128)||(44600336-44600465)
chr7 (1-128)||(43108000-43108130)
chr7 (1-128)||(32491202-32491330)
chr7 (1-128)||(23731452-23731579)
chr7 (1-128)||(35181082-35181211)
chr7 (1-128)||(40560272-40560401)
chr7 (1-128)||(41815788-41815917)
chr7 (1-128)||(45598794-45598923)
chr7 (2-128)||(3157327-3157455)
chr7 (2-128)||(19933150-19933278)
chr7 (2-128)||(19964289-19964417)
chr7 (2-128)||(34808110-34808238)
chr7 (3-121)||(9818372-9818491)
chr7 (3-121)||(10720297-10720416)
chr7 (3-120)||(47383298-47383417)
chr7 (1-123)||(21654221-21654345)
chr7 (1-128)||(23106342-23106472)
chr7 (1-127)||(18206415-18206532)
chr7 (1-128)||(42617561-42617690)
chr7 (21-128)||(48879298-48879407)
chr7 (3-128)||(41889063-41889190)
chr7 (34-128)||(40583068-40583164)
chr7 (41-128)||(22111425-22111514)
chr7 (1-128)||(48937984-48938111)
chr7 (1-128)||(48943010-48943137)
chr7 (8-128)||(30082261-30082372)
chr7 (1-88)||(7989425-7989516)
chr7 (1-75)||(41890410-41890484)
chr7 (8-76)||(18800912-18800980)
chr7 (30-123)||(39348708-39348803)
chr7 (189-234)||(18206308-18206353)
chr7 (189-234)||(35181272-35181317)
chr7 (15-128)||(39337431-39337549)
chr7 (189-234)||(42617751-42617796)
chr7 (189-234)||(43107894-43107939)
chr7 (5-107)||(47778651-47778755)
chr7 (6-77)||(25944456-25944527)
chr7 (189-234)||(7989297-7989342)
chr7 (189-234)||(19933044-19933089)
chr7 (189-234)||(19964183-19964228)
chr7 (189-234)||(40560462-40560507)
chr7 (189-234)||(41815682-41815727)
chr7 (189-234)||(48879468-48879513)
chr7 (189-234)||(48937878-48937923)
chr7 (189-229)||(21654115-21654155)
chr7 (190-234)||(41890232-41890276)
chr7 (6-69)||(16562659-16562722)
chr7 (6-69)||(16602940-16603003)
chr7 (6-69)||(18102440-18102503)
chr7 (3-128)||(33152941-33153058)
chr7 (26-69)||(46760444-46760487)
chr7 (25-72)||(47557930-47557977)
chr7 (189-234)||(3157516-3157561)
chr7 (189-234)||(9818548-9818593)
chr7 (189-234)||(10720473-10720518)
chr7 (26-128)||(22369145-22369250)
chr7 (189-234)||(23106533-23106578)
chr7 (189-234)||(23731640-23731685)
chr7 (39-76)||(29236205-29236242)
chr7 (189-234)||(32491096-32491141)
chr7 (189-234)||(34808299-34808344)
chr7 (189-234)||(41889251-41889296)
chr7 (75-123)||(41890342-41890391)
chr7 (189-234)||(44600526-44600571)
chr7 (189-233)||(47383486-47383530)
chr7 (6-69)||(14805781-14805844)
chr7 (6-69)||(15252775-15252838)
chr7 (8-59)||(21761947-21761998)
chr7 (26-69)||(24151777-24151820)
chr7 (25-106)||(35069013-35069096)
chr7 (26-69)||(39174181-39174224)
chr7 (6-56)||(6190925-6190975)
chr7 (205-234)||(22111319-22111348)
chr7 (193-234)||(29236057-29236098)
chr7 (189-238)||(33153119-33153168)
chr7 (75-128)||(35084196-35084249)
chr7 (25-123)||(35888110-35888210)
chr7 (189-234)||(36576498-36576542)
chr7 (205-234)||(40583241-40583270)
chr7 (5-69)||(22631966-22632030)
chr7 (189-233)||(35084091-35084135)
chr7 (23-123)||(38260231-38260335)
[»] chr1 (87 HSPs)
chr1 (1-126)||(49924310-49924437)
chr1 (1-128)||(29488639-29488768)
chr1 (1-128)||(38942581-38942710)
chr1 (1-128)||(40935753-40935882)
chr1 (1-128)||(40960614-40960743)
chr1 (1-128)||(44875070-44875199)
chr1 (1-123)||(46949212-46949336)
chr1 (3-128)||(26907229-26907356)
chr1 (1-128)||(31970449-31970577)
chr1 (4-128)||(23873967-23874093)
chr1 (1-128)||(18036436-18036564)
chr1 (1-128)||(25990640-25990768)
chr1 (3-120)||(9127936-9128055)
chr1 (3-128)||(15285697-15285824)
chr1 (3-128)||(28017551-28017678)
chr1 (3-128)||(39026386-39026512)
chr1 (3-128)||(43656177-43656303)
chr1 (3-128)||(45358016-45358143)
chr1 (4-128)||(28916655-28916781)
chr1 (1-128)||(40219948-40220076)
chr1 (3-128)||(18913486-18913611)
chr1 (3-128)||(18852116-18852243)
chr1 (1-128)||(4529079-4529207)
chr1 (8-128)||(35941739-35941861)
chr1 (3-120)||(26479632-26479751)
chr1 (1-119)||(47996847-47996965)
chr1 (2-117)||(35189092-35189210)
chr1 (1-128)||(6848446-6848573)
chr1 (1-97)||(35884113-35884211)
chr1 (1-128)||(36383819-36383948)
chr1 (5-107)||(44149010-44149114)
chr1 (42-122)||(15311110-15311192)
chr1 (24-128)||(51339035-51339142)
chr1 (2-123)||(7397602-7397725)
chr1 (189-234)||(23873861-23873906)
chr1 (189-234)||(26907125-26907170)
chr1 (189-234)||(38942475-38942520)
chr1 (189-234)||(40220137-40220182)
chr1 (189-233)||(46949402-46949446)
chr1 (6-69)||(6786717-6786780)
chr1 (6-77)||(15959850-15959921)
chr1 (6-69)||(43667487-43667550)
chr1 (24-128)||(51840633-51840740)
chr1 (193-238)||(15285888-15285933)
chr1 (189-234)||(18852304-18852349)
chr1 (193-234)||(25990833-25990874)
chr1 (189-234)||(28916549-28916594)
chr1 (189-234)||(31970343-31970388)
chr1 (189-234)||(40935647-40935692)
chr1 (1-123)||(41063635-41063760)
chr1 (189-234)||(43656071-43656116)
chr1 (189-229)||(40960513-40960553)
chr1 (6-69)||(6787209-6787272)
chr1 (6-69)||(12449154-12449217)
chr1 (191-234)||(15311260-15311303)
chr1 (6-69)||(32624193-32624256)
chr1 (23-69)||(7468171-7468217)
chr1 (3-65)||(23392386-23392448)
chr1 (23-69)||(28016962-28017008)
chr1 (189-234)||(18036625-18036670)
chr1 (189-234)||(18913379-18913424)
chr1 (189-234)||(39026280-39026325)
chr1 (189-234)||(44875260-44875305)
chr1 (189-234)||(49924500-49924545)
chr1 (25-69)||(2125967-2126011)
chr1 (198-234)||(29488838-29488874)
chr1 (25-69)||(39555773-39555817)
chr1 (1-69)||(47600258-47600326)
chr1 (6-69)||(1820296-1820358)
chr1 (189-224)||(13291874-13291909)
chr1 (23-123)||(16661431-16661534)
chr1 (7-54)||(24728860-24728907)
chr1 (189-228)||(46803708-46803747)
chr1 (23-69)||(298885-298931)
chr1 (23-69)||(6785353-6785399)
chr1 (192-234)||(6848343-6848385)
chr1 (6-56)||(16854015-16854065)
chr1 (7-69)||(33369434-33369496)
chr1 (5-59)||(33431440-33431493)
chr1 (6-56)||(46542861-46542911)
chr1 (7-69)||(47026375-47026437)
chr1 (5-107)||(3076175-3076278)
chr1 (189-234)||(35941922-35941967)
chr1 (6-58)||(4672779-4672831)
chr1 (3-55)||(13136781-13136833)
chr1 (25-69)||(42966000-42966044)
chr1 (5-49)||(50665136-50665180)
[»] chr5 (57 HSPs)
chr5 (1-128)||(8146150-8146279)
chr5 (1-123)||(35462860-35462984)
chr5 (3-128)||(30086685-30086812)
chr5 (1-128)||(8541701-8541829)
chr5 (1-128)||(16286220-16286349)
chr5 (1-128)||(31690757-31690886)
chr5 (3-128)||(20914754-20914881)
chr5 (1-128)||(42364932-42365057)
chr5 (1-120)||(13146622-13146743)
chr5 (3-125)||(25962592-25962716)
chr5 (40-128)||(31316938-31317028)
chr5 (1-128)||(12638783-12638911)
chr5 (1-128)||(37066360-37066489)
chr5 (30-128)||(24432537-24432637)
chr5 (1-128)||(24439465-24439594)
chr5 (1-119)||(8143828-8143947)
chr5 (1-120)||(20452567-20452689)
chr5 (189-234)||(24432431-24432476)
chr5 (189-234)||(25962479-25962524)
chr5 (189-234)||(31316832-31316877)
chr5 (6-106)||(42273529-42273632)
chr5 (189-233)||(20914942-20914986)
chr5 (5-77)||(39505442-39505514)
chr5 (6-69)||(11262071-11262134)
chr5 (6-69)||(12730205-12730268)
chr5 (6-77)||(20643894-20643965)
chr5 (23-77)||(9957626-9957680)
chr5 (189-234)||(8146044-8146089)
chr5 (39-123)||(17825340-17825425)
chr5 (5-107)||(25840742-25840847)
chr5 (9-128)||(2002270-2002381)
chr5 (6-69)||(8225343-8225406)
chr5 (23-123)||(8506353-8506456)
chr5 (7-69)||(34425212-34425273)
chr5 (26-120)||(8959559-8959656)
chr5 (189-234)||(12638972-12639017)
chr5 (189-234)||(13146812-13146857)
chr5 (189-234)||(16286114-16286159)
chr5 (189-234)||(31690651-31690696)
chr5 (4-69)||(32433552-32433616)
chr5 (189-233)||(24439655-24439699)
chr5 (29-69)||(38280748-38280788)
chr5 (23-123)||(28906984-28907087)
chr5 (23-123)||(28943379-28943482)
chr5 (6-69)||(37522777-37522840)
chr5 (6-69)||(37562949-37563012)
chr5 (27-69)||(104438-104480)
chr5 (24-58)||(38130345-38130379)
chr5 (189-234)||(8541595-8541640)
chr5 (189-234)||(35462750-35462794)
chr5 (189-234)||(37066254-37066299)
chr5 (189-230)||(42365118-42365159)
chr5 (25-69)||(842753-842797)
chr5 (5-49)||(4463223-4463267)
chr5 (4-56)||(11857938-11857990)
chr5 (191-234)||(30086578-30086622)
chr5 (1-106)||(41625689-41625797)
[»] chr6 (31 HSPs)
chr6 (1-128)||(30949026-30949155)
chr6 (1-128)||(31887258-31887388)
chr6 (1-128)||(10227803-10227932)
chr6 (1-128)||(12278597-12278726)
chr6 (1-128)||(17721946-17722075)
chr6 (2-128)||(33756148-33756276)
chr6 (1-128)||(373990-374119)
chr6 (1-128)||(17598184-17598313)
chr6 (3-128)||(30766339-30766466)
chr6 (8-123)||(32882835-32882941)
chr6 (189-233)||(30766527-30766571)
chr6 (3-123)||(4031881-4032004)
chr6 (189-234)||(374180-374225)
chr6 (1-123)||(4987835-4987960)
chr6 (5-107)||(7275053-7275159)
chr6 (193-234)||(17721840-17721881)
chr6 (189-234)||(30949216-30949261)
chr6 (6-69)||(3095908-3095971)
chr6 (6-69)||(21542329-21542392)
chr6 (6-69)||(34177828-34177891)
chr6 (189-235)||(5822064-5822110)
chr6 (192-234)||(12278790-12278832)
chr6 (23-69)||(16013589-16013635)
chr6 (1-123)||(3888320-3888444)
chr6 (189-234)||(10227993-10228038)
chr6 (23-123)||(5822162-5822266)
chr6 (6-69)||(35129242-35129305)
chr6 (23-69)||(1130433-1130479)
chr6 (189-234)||(5121487-5121532)
chr6 (189-234)||(17598374-17598419)
chr6 (189-233)||(21964038-21964082)
[»] scaffold0495 (2 HSPs)
scaffold0495 (1-128)||(4522-4650)
scaffold0495 (189-234)||(4711-4756)
[»] scaffold0018 (1 HSPs)
scaffold0018 (26-69)||(154792-154835)
[»] scaffold0132 (2 HSPs)
scaffold0132 (24-69)||(910-955)
scaffold0132 (24-69)||(8870-8915)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-69)||(157672-157737)
[»] scaffold0045 (1 HSPs)
scaffold0045 (25-69)||(77887-77931)
[»] scaffold0442 (1 HSPs)
scaffold0442 (29-69)||(9979-10019)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 51255080 - 51255207
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51255080 cctaaaatataagtaaaaaaatcttattttctttgtctcaaaatataagtaaaaaagatcaacttttatgttatttatgttttttcaaacaaatcatctt 51255179  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||| ||||||||||||||||||||    
T  51255180 ttccaatctaaaattaaatgcaagttgc 51255207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 46819941 - 46820070
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||  |||||||||||| ||||||||||||    
T  46819941 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataaataaaaaagatcaacttttatgctatttttatgtttttttaaacaaatcatc 46820040  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  46820041 ttttccaatgtaaaattaaatgcaagttgc 46820070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 21654136 - 21654266
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcat 97  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  21654136 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcat 21654235  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||| ||||    
T  21654236 cttttccaatgtaaaattaaatgcaaattgc 21654266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1335002 - 1335131
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  1335002 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgttattattatgttttttcaaacaaatcatc 1335101  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  1335102 tttttcaatgtaaaattaaatgcaaattgc 1335131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16739383 - 16739263
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| |||  |||| |||||||||||||||||||    
T  16739383 cctaaaatataagtaaaaaaatctgattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatc 16739284  T
Q  99 ttttccaatgtaaaattaaat 119  Q
    |||||||||||||||||||||    
T  16739283 ttttccaatgtaaaattaaat 16739263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 45781290 - 45781418
Alignment:
Q  3 taaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatct 99  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  45781290 taaaatataagaaaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatct 45781389  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||| ||||||||    
T  45781390 tttccaatgtaaaattaaattcaagttgc 45781418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13541169 - 13541298
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||  |||||  ||| || ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  13541169 cctaaaatataaacaaaaaattcttatattctttgtctcaaaatataagaaaaaaagaccaacttttatgttattattatgttttttcgaacaaatcatc 13541268  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  13541269 ttttccaatgtaaaattaaatgcaaattgc 13541298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 23513459 - 23513588
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||  ||||||||||||||||||| ||||    
T  23513459 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaaacatc 23513558  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  23513559 tttttcaatgtaaaattaaatgcaaattgc 23513588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26641340 - 26641211
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  26641340 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaacaccaacttttatgctattattatgttttttcaaacaaatcatc 26641241  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| ||| |||||||||||||||| ||||    
T  26641240 tttttcaaggtaaaattaaatgcaaattgc 26641211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 55400630 - 55400759
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || |||| ||||||||||||||||||||| |||||||||  ||||||||| ||||  |||||||||||||||||||||||    
T  55400630 cctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagacttacttttatgctattattatgttttttcaaacaaatcatc 55400729  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  55400730 ttttccaatgtaaaattaaatgcaaattgc 55400759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 31126106 - 31126233
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||  ||  ||||||||||||||||||||||| ||    
T  31126106 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcatttt 31126205  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||| ||||    
T  31126206 ttccaatgtaaaattaaatgcaaattgc 31126233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43575850 - 43575978
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgt-tttttcaaacaaatcatct 99  Q
    ||||||||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| ||||||||||| ||||| | | |||||||||||||||||||    
T  43575850 cctaaaatataagcaaaaaaatctctttttttttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttttcaaacaaatcatct 43575949  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| ||||||||||||||||||||||||    
T  43575950 tttctaatgtaaaattaaatgcaagttgc 43575978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 46580430 - 46580557
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||| ||    
T  46580430 taaaatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcatatt 46580529  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    || |||||||||||||||||||| ||||    
T  46580530 ttacaatgtaaaattaaatgcaaattgc 46580557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 53020074 - 53020204
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcat 97  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||| |||  ||||| ||||||||||||||||||    
T  53020074 cctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataagtaaaaaataccaacttttatgctattattatgtttttttcaaacaaatcat 53020173  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||| |||||||||||||||||||| ||||    
T  53020174 ctttttcaatgtaaaattaaatgcaaattgc 53020204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32322467 - 32322338
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| |  ||||||| ||  ||||||||||||||||||||| |||    
T  32322467 cctaaaatataagcaaataaatctcattttctttgtctcaaaatataagtaaaaaagactagattttatgctatttttatgttttttcaaacaaattatc 32322368  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||| ||||||||    
T  32322367 tttttcaatgtaaaattaaatacaagttgc 32322338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 51426512 - 51426635
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg--ttttttcaaacaaatcatct 99  Q
    |||||||||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||  |||||  ||||||||||||||||||||    
T  51426512 aaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattcttatgttttttttcaaacaaatcatct 51426611  T
Q  100 tttccaatgtaaaattaaatgcaa 123  Q
    |||| |||||||||||||||||||    
T  51426612 tttctaatgtaaaattaaatgcaa 51426635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 28793055 - 28793183
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| |  | ||||| |||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  28793055 taaaatataagcaaaaaaaatttattttatttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatctt 28793154  T
Q  101 ttccaatgt-aaaattaaatgcaagttgc 128  Q
    ||| ||||| |||||||||||||||||||    
T  28793155 ttctaatgtaaaaattaaatgcaagttgc 28793183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 37324314 - 37324183
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg----ttttttcaaacaaatca 96  Q
    ||||||||||| ||||| ||| ||| |||||||||| |||||||||| ||||||||||||||||||||| ||  |||||    |||||||||||||||||    
T  37324314 taaaatataagcaaaaaaatcacatattctttgtcttaaaatataagcaaaaaagaccaacttttatgtcattattatgttttttttttcaaacaaatca 37324215  T
Q  97 tcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||| ||||    
T  37324214 tcttttccaatgtaaaattaaatgcaaattgc 37324183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34022513 - 34022622
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||  ||||||| ||  |||||||||||||||||||||||||    
T  34022513 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaaaaccattttttatgctatttttatgttttttcaaacaaatcatc 34022612  T
Q  99 ttttccaatg 108  Q
    ||||||||||    
T  34022613 ttttccaatg 34022622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 36189234 - 36189105
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttca-aacaaatcat 97  Q
    |||||| |||||| ||||| ||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||| || ||||| |    
T  36189234 cctaaattataagcaaaaaaatcacattttctttgtc-caaaatataagcaaaaaagaccatcttttatgttattattatgttttttcacaaaaaatctt 36189136  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||| |||||||||||||||| ||||    
T  36189135 cttttccaaagtaaaattaaatgcaaattgc 36189105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 46296266 - 46296176
Alignment:
Q  40 aaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||| |||||||| ||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46296266 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccgatgtaaaattaaatgcaagttgc 46296176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 52172235 - 52172109
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgtttttt-caaacaaatcatct 99  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||||||| ||||||||  || ||||||| |||||  ||||||||| ||||||||||||||    
T  52172235 taaaatataagaaaaaa-atctcatttttttt-tctcaaaatataagcaaaaaagattaatttttatgctatttttatgtttttttcaaacaaatcatct 52172138  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    ||| |||||||||||||||||||||||||    
T  52172137 ttttcaatgtaaaattaaatgcaagttgc 52172109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45347896 - 45347828
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  45347896 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 45347828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 52252003 - 52252055
Alignment:
Q  74 tttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagtt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52252003 tttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagtt 52252055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 22456227 - 22456109
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttc 103  Q
    |||||||||||| | |||||||||||| || |||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| ||||||||    
T  22456227 tataagtaaaaaaaactcattttctttatcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttc 22456129  T
Q  104 caatgtaaaattaaatgcaa 123  Q
    ||| | ||||||||||||||    
T  22456128 caaaggaaaattaaatgcaa 22456109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 2927171 - 2927276
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta---tgttttttcaaacaaatcatcttt 101  Q
    ||||||||||||||| | |||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||   |  ||||| ||| |||||||||||    
T  2927171 aaatataagtaaaaaaaactcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttaaaaaaaatcatcttt 2927270  T
Q  102 tccaat 107  Q
    ||||||    
T  2927271 tccaat 2927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 22479273 - 22479155
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttc 103  Q
    |||||||||||| |  |||||||||||||| |||| |||||| ||||||||| |||||||||     ||| ||||||||||||||| |||| ||||||||    
T  22479273 tataagtaaaaaaaattcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttc 22479175  T
Q  104 caatgtaaaattaaatgcaa 123  Q
    ||| | ||||||||||||||    
T  22479174 caaaggaaaattaaatgcaa 22479155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33974804 - 33974738
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactttt 67  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  33974804 cctataatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaactttt 33974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 23209505 - 23209376
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcat 97  Q
    ||||| |||||| ||||| | |||||||||||||||| ||| |||||| |||||||||||||||||||     ||| ||||||| ||||||| |||||||    
T  23209505 ctaaattataagcaaaaaaaactcattttctttgtcttaaattataagcaaaaaagaccaacttttatcatatttaattatgttatttcaaa-aaatcat 23209407  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||| |  ||||||||||||| ||||    
T  23209406 ctttcccaaagagaaattaaatgcaaattgc 23209376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 38401272 - 38401397
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatca 96  Q
    |||||| |||||| ||||| | ||||||||||||||| |||| |||||| |||||||| ||||||||||     ||| ||||||||||||||| |||| |    
T  38401272 cctaaattataagcaaaaaaaactcattttctttgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaa-aaataa 38401370  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    ||||||||||   ||||||||||||||    
T  38401371 tcttttccaaaagaaaattaaatgcaa 38401397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 49068019 - 49068072
Alignment:
Q  75 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  49068019 ttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgc 49068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 14752448 - 14752377
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  14752448 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 14752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10251903 - 10252028
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatca 96  Q
    |||||| ||||| |||||| |  ||||||||||||||||||| |||||| |||||| ||||||||||||     ||| ||||||||||||||| | || |    
T  10251903 cctaaattataactaaaaaaaattcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agatta 10252001  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||| | ||||||||| ||||    
T  10252002 tcttttccaaaggaaaattaaaagcaa 10252028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 32322277 - 32322232
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  32322277 catctttccatgaaacttattccaaggagaacacaaaaaattatac 32322232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 51309495 - 51309540
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  51309495 catctttctatgaaacttattccaagaagaacacaaaaaattatac 51309540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 52252118 - 52252167
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  52252118 catctttccatgaaacttattccaagaagaacacaaaaaattatacttca 52252167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 26641150 - 26641106
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  26641150 catctttccatgaaacttattccaaggagaacacaaaaaattata 26641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 49067007 - 49067079
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt 75  Q
    ||||||||||| |||||  | |||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  49067007 taaaatataagcaaaaaattatcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt 49067079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 21214135 - 21214258
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatc 98  Q
    |||| |||||| ||||| | ||||||||||||||| |||| |||||| |||||||| ||||||||||     ||| ||||||||||||||| | || |||    
T  21214135 taaattataagcaaaaaaaactcattttctttgtcccaaattataagcaaaaaagatcaacttttatcacatttaattatgttttttcaaa-atattatc 21214233  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    ||||||||   ||||||||||||||    
T  21214234 ttttccaaatgaaaattaaatgcaa 21214258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 2994620 - 2994519
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 120  Q
    ||||||||||||| |||| |||||| ||||| ||| |||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||||    
T  2994620 cattttctttgtcccaaattataagaaaaaatgacaaacttttatcgtatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaatg 2994522  T
Q  121 caa 123  Q
    |||    
T  2994521 caa 2994519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 21654327 - 21654372
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  21654327 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 21654372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 45347751 - 45347706
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  45347751 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 45347706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 55400820 - 55400865
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  55400820 catctttccatgaaacttattccaaagagaacacaaaaaattatac 55400865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 1335192 - 1335232
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaat 229  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  1335192 catctttccatgaaacttattccaaggagaacacaaaaaat 1335232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 16739197 - 16739153
Alignment:
Q  190 atctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  16739197 atctttccatgaaacttattccaaggagaacacaacaaattatac 16739153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 46557435 - 46557379
Alignment:
Q  13 gtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||| | |||||||||||||||| |||||||||||||||||||| || ||||||    
T  46557435 gtaaaaaaaactcattttctttgtcttaaaatataagtaaaaaagacaaatttttat 46557379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 49583879 - 49583979
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    |||||||| | |||| |||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||    
T  49583879 ctcattttttctgtcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaa 49583977  T
Q  119 tg 120  Q
    ||    
T  49583978 tg 49583979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 46296115 - 46296076
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaa 228  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  46296115 catctttccatgaaacttattccaaggagaacacaaaaaa 46296076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 34194807 - 34194905
Alignment:
Q  28 tttctttgtctcaaaatataagtaaaaaagaccaacttttatg----ttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||| || | |||||| |||||||||||||||||||     ||| ||||||| ||||||| |||| ||||||||||| | ||||||||||||||    
T  34194807 tttctttgtcccagattataagcaaaaaagaccaacttttatcatttttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatgcaa 34194905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 51255272 - 51255318
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatacttcat 239  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||    
T  51255272 tttccatgaaacttatttctaggagaacacaaaaaattatacttcat 51255318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10114804 - 10114928
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatca 96  Q
    |||||| |||||| ||||| |  ||||||||||||||||||| |||||| |||||| | ||||||||||     ||| |||||||||||| |||| || |    
T  10114804 cctaaattataagcaaaaaaaattcattttctttgtctcaaattataagcaaaaaata-caacttttatcatatttaattatgttttttc-aacagatta 10114901  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||| | ||||||||| ||||    
T  10114902 tcttttccaaaggaaaattaaaagcaa 10114928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 28793244 - 28793289
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||    
T  28793244 catctttccatgaaatttattccaaggataacacaaaaaattatac 28793289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 31126294 - 31126339
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||    
T  31126294 catctttccataaaacttatttcaaggagaacacaaaaaattatac 31126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 34022681 - 34022726
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||    
T  34022681 catctttccataaaacttatttcaaggagaacacaaaaaattatac 34022726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 36546457 - 36546518
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactttt 67  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||    
T  36546457 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 36546518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 36561858 - 36561797
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactttt 67  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||    
T  36561858 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 36561797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 43576039 - 43576084
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  43576039 catctttccatgaaacttattcgaaggagaacacaaaaaatcatac 43576084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 45781479 - 45781524
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||    
T  45781479 catctttccatgaaacttattctaaagagaacacaaaaaattatac 45781524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 11054498 - 11054454
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  11054498 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 11054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 34105443 - 34105510
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 76  Q
    |||||| |||||  |||||||||||||| | ||||||||||  |||||||| |||||||||||||||||    
T  34105443 tataagcaaaaaattctcattttctttgcc-caaaatataaacaaaaaagatcaacttttatgttattt 34105510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 53020265 - 53020309
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| || |||||||||||||| ||||||||||||||||||    
T  53020265 catctttccataaaacttattccaagaagaacacaaaaaattata 53020309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 579389 - 579326
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||| ||| ||||| | ||||||||  || |||||||||||||||||||||||| |||||||||    
T  579389 aatacaagcaaaaaaaactcatttttattatctcaaaatataagtaaaaaagacaaacttttat 579326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 28875290 - 28875361
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    |||||||| ||||| | ||||||||| ||||| ||||||||||| |||||| |  ||||||||| |||||||    
T  28875290 aatataagcaaaaaaagctcattttcattgtcccaaaatataagcaaaaaatataaacttttatcttattta 28875361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 7866706 - 7866660
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  7866706 ctcattttctttgtcccaaaatataaacaaaaaagacaaacttttat 7866660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 26725014 - 26724977
Alignment:
Q  201 aaacttattccaaggagaacacaaaaaattatacttca 238  Q
    ||||||||||||| || |||||||||||||||||||||    
T  26725014 aaacttattccaaagaaaacacaaaaaattatacttca 26724977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 37074860 - 37074905
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||||    
T  37074860 tcattttctttgtcccgaaatataagcaaaaaagacaaacttttat 37074905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 37075049 - 37075098
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||| |||| |||||| |||||| || |||||||||||||||||||||    
T  37075049 catcttcctataaaactttttccaaagaaaacacaaaaaattatacttca 37075098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 46580618 - 46580662
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||    
T  46580618 catctttccatgaa-cttatttcaaggagaacacaaaaaattatac 46580662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 46711881 - 46711836
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||||||||||||||| | |||| || |||||||||    
T  46711881 tcattttctttgtctcaaaatataagcataaaaaacaaacttttat 46711836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 51309323 - 51309391
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaa-aagaccaacttttatgttattt 76  Q
    |||||| ||||| || ||||||| | |||||||||||||||| |||| ||||||||||||||| ||||||    
T  51309323 tataagaaaaaaaatatcatttt-tatgtctcaaaatataagcaaaaaaagaccaacttttatattattt 51309391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 51311554 - 51311618
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||| ||||| | || |||||| ||||| ||||||||||||||||||||| || ||||||    
T  51311554 aaaatataagcaaaaaaaacttattttcattgtc-caaaatataagtaaaaaagacaaatttttat 51311618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 51426701 - 51426746
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||    
T  51426701 catctttccatgaaatttattctaagaagaacacaaaaaattatac 51426746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 23311783 - 23311739
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||| | |||||||||    
T  23311783 cattttctttgtcccaaaatataagcaaaaaagtcaaacttttat 23311739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 26207716 - 26207768
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 56  Q
    |||||||||| ||||| | ||||||||||||||| |||||| |||| ||||||    
T  26207716 aaaatataagcaaaaaaaactcattttctttgtcccaaaatgtaagaaaaaaa 26207768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 49068133 - 49068177
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||   |||||||||||||||||||||    
T  49068133 catctttccatgaaacttatttataggagaacacaaaaaattata 49068177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 9e-54; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 21539648 - 21539777
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  21539648 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc 21539747  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  21539748 ttttccaatgtaaaattaaatgcaagttgc 21539777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 38549908 - 38549779
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||| ||||||||    
T  38549908 cctaaaatataagtaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcatc 38549809  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  38549808 ttttccaatgtaaaattaaatgcaagttgc 38549779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 33635228 - 33635356
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  33635228 ctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatct 33635327  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| ||||||||||||||||||||||||    
T  33635328 tttctaatgtaaaattaaatgcaagttgc 33635356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 792621 - 792492
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  792621 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaatcatc 792522  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  792521 ttttccaatgtaaaattaaatgcaaattgc 792492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15858875 - 15858746
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||||||| ||||||||    
T  15858875 cctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaaattttatgctattattatgttttttcaaataaatcatc 15858776  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  15858775 ttttccaatgtaaaattaaatgcaaattgc 15858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 8784288 - 8784415
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| |||||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||    
T  8784288 taaaatataagcaaaaaattctcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttatttcaaacaaatcatctt 8784387  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    || |||||||||||||||||||| ||||    
T  8784388 tttcaatgtaaaattaaatgcaaattgc 8784415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 29514282 - 29514155
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  29514282 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctt 29514183  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||  ||||||||||||||||||| ||||    
T  29514182 ttttaatgtaaaattaaatgcaaattgc 29514155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28492411 - 28492540
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||| ||||||||||||| |||||||||| |||||||||||||||||||| |||  |||| ||||||||||||||||||     
T  28492411 cctaaaatataagcaaaaaaatcttattttctttgtcttaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatt 28492510  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  28492511 ttttccaatgtaaaattaaatgcaaattgc 28492540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29514739 - 29514619
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  29514739 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 29514641  T
Q  99 ttttccaatgtaaaattaaatg 120  Q
    ||| ||||||||||||||||||    
T  29514640 tttcccaatgtaaaattaaatg 29514619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 4033939 - 4033811
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||| ||| ||||||| |||  ||||||||||||||||||| |||||    
T  4033939 ctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaaacatct 4033840  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    ||| |||||||||||||||||||| ||||    
T  4033839 ttttcaatgtaaaattaaatgcaaattgc 4033811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 28424166 - 28424289
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || | || |||||||||||||||| |||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  28424166 cctaaaatataagcaaaaaaattt-atattctttgtctcaaaatttaagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 28424264  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||||||||||||||||||    
T  28424265 ttttccaatgtaaaattaaatgcaa 28424289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 43075643 - 43075770
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| || ||||| |||||||||||| |||||| ||||||||||||| ||||  ||||||||||||||||||||||||     
T  43075643 taaaatataagcaaaaaaatctcatattttttgtgtcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatcta 43075742  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||| ||||    
T  43075743 ttccaatgtaaaattaaatgcaaattgc 43075770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4091901 - 4092031
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttat-gttttttcaaacaaatcat 97  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| || ||| ||||||||||||| |||  ||||  |||||||||| |||||||    
T  4091901 cctaaaatataagtaataaaatctcattttctttgtctcaaaatataagcaagaaaaaccaacttttatgctattattatatttttttcaaataaatcat 4092000  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||| |||||||||||||||||||||||||    
T  4092001 ctttttcaatgtaaaattaaatgcaagttgc 4092031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 5091805 - 5091676
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg---ttatt-tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||||||   ||||| | | |||||||||||||||||||    
T  5091805 taaaatataagtaaaaaaatttcatattctttatctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttttttcaaacaaatcatc 5091706  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  5091705 tttttcaatgtaaaattaaatgcaaattgc 5091676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10979083 - 10979198
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||| || |||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  10979083 cctaaaatataagcaaaaaaatctcattttttttgtctcaaaatat-agcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc 10979181  T
Q  99 ttttccaatgtaaaatt 115  Q
    |||||||| ||| ||||    
T  10979182 ttttccaaagtagaatt 10979198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 35832304 - 35832432
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| || | || ||||||||||||||||||||| |||||||||  | ||||||| ||||  ||||||||||||||||||||||||    
T  35832304 ctaaaatataagcaaaaaaattttatattctttgtctcaaaatataagcaaaaaagacatatttttatgctattattatgttttttcaaacaaatcatct 35832403  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||| ||||||||||||||| ||||    
T  35832404 tttccaatataaaattaaatgcaaattgc 35832432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 10478068 - 10478198
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaaga--ccaacttttatgttattt--atgtttt-ttcaaacaaatcat 97  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||||| |||||| |  |||| ||||||| |||||  ||||||| ||||||||||| ||    
T  10478068 taaaatataagcaaaaaaatctcattttttttgtctcaaaatataagcaaaaaaaaaaccaatttttatgctatttttatgtttttttcaaacaaatgat 10478167  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||||    
T  10478168 cttttccaatgtaaaattaaatgcaagttgc 10478198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 43451409 - 43451525
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctttt 102  Q
    ||||||||||  ||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||         ||||||||||||||||||||    
T  43451409 taaaatataaacaaaaaaatctcattttctttgtatcaaaatataagtaaaaaagatcaatttttatgtta---------tttcaaacaaatcatctttt 43451499  T
Q  103 ccaatgtaaaattaaatgcaagttgc 128  Q
     |||||||||||||||||||||||||    
T  43451500 tcaatgtaaaattaaatgcaagttgc 43451525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 14565611 - 14565509
Alignment:
Q  29 ttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatgcaagt 125  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||  |||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  14565611 ttctttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaat 14565512  T
Q  126 tgc 128  Q
    |||    
T  14565511 tgc 14565509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 44803823 - 44803918
Alignment:
Q  34 tgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||  ||||||||||||||  |||| |||||| ||| ||||||||||||||||||||||||||||| ||| ||||    
T  44803823 tgtctcaaaatataagtaaaaaagataaacttttatgttattattatatttttt-aaataaatcatcttttccaatgtaaaattaaatacaaattgc 44803918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 22162249 - 22162340
Alignment:
Q  40 aaaatataagtaaaaaagacc-aacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||| |||||||||  |||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  22162249 aaaatataagcaaaaaagacttaacttttatgctattattatgttttttcaaacaaataatcttttccaatgtaaaattaaatgcaaattgc 22162340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 29524322 - 29524258
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  29524322 aaatataagtaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 29524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 19263979 - 19264050
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  19263979 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 19264050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 792431 - 792386
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  792431 catctttccatgaaacttattccaaggagaacacaaaaaattatac 792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 4092092 - 4092137
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  4092092 catctttccatgaaacttattccaaggagaacacaaaaaattatac 4092137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13823026 - 13822949
Alignment:
Q  1 cctaaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaa-aaaagaccaacttttatgttattt 76  Q
    |||||| |||||||||||| | |||||||||||||||| |||||||||||||| |||| || ||||||||||||||||    
T  13823026 cctaaattataagtaaaaaaaatctcattttctttgtcccaaaatataagtaaaaaaatactaacttttatgttattt 13822949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 14565448 - 14565403
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  14565448 catctttccatgaaacttattccaaggagaacacaaaaaattatac 14565403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 15068639 - 15068755
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctttt 102  Q
    |||| |||||| ||||| |  |||||||||||||||||||||||||| |||||||| ||| |||||| |||         ||||||  ||||||||||||    
T  15068639 taaattataagcaaaaaaaattcattttctttgtctcaaaatataagcaaaaaagatcaatttttatatta---------tttcaagaaaatcatctttt 15068729  T
Q  103 ccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||| ||||    
T  15068730 ccaaagtaaaattaaatgcaaattgc 15068755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 21539838 - 21539883
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  21539838 catctttccatgaaacttattccaaggagaacacaaaaaattatac 21539883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 18834170 - 18834046
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt---caaacaaatcatctttt 102  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||| |||||||| ||||||||||  |||  |||||||||||    ||| |||||||| |||    
T  18834170 tataagcaaaaaaatcacattttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttttaaaaaaaaatcatc-ttt 18834072  T
Q  103 ccaatgtaaaattaaatgcaagttgc 128  Q
    | || |||||||||||||||| ||||    
T  18834071 ctaaagtaaaattaaatgcaaattgc 18834046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 38070912 - 38071012
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    ||||||||||||||| |||| |||||| ||||||||| |||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||    
T  38070912 ctcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 38071010  T
Q  119 tg 120  Q
    ||    
T  38071011 tg 38071012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 25571941 - 25572029
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatcttttccaat 107  Q
    ||||||||||||||| ||||||||||| |||||| || |||||||||  ||||||    |||||||| ||| |||||||||||||||||    
T  25571941 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttattctatttaatcttgttttttaaaaaaaatcatcttttccaat 25572029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 26998214 - 26998336
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatc 98  Q
    |||| |||||| ||||| || ||||||||||||||  ||| |||||| |||||||||||||||||||     ||| |||| |||||||||| |||| |||    
T  26998214 taaattataagcaaaaaaat-tcattttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatattttttcaaa-aaattatc 26998311  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||||||| | ||||||||||||||    
T  26998312 ttttccaaaggaaaattaaatgcaa 26998336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 8701480 - 8701585
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 100  Q
    ||||||||| ||||| | |||||||||||| ||| |||||||||  ||||||||| |||||||||  ||||||    |||||||| ||| ||||||||||    
T  8701480 aaatataagcaaaaaaaactcattttctttatcttaaaatataaacaaaaaagacaaacttttattatatttaatcttgtttttt-aaaaaaatcatctt 8701578  T
Q  101 ttccaat 107  Q
    |||||||    
T  8701579 ttccaat 8701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 10979250 - 10979295
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  10979250 catctttccatgaaacttattccaagaagaacacaaaaaattatac 10979295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 20380041 - 20380142
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat----ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 120  Q
    |||||| |||| | |||| |||||| ||||||||||||||||||| ||||    ||||||||||||||| | || ||||||||||| | |||||||||||    
T  20380041 cattttgtttgacccaaattataagcaaaaaagaccaacttttatcttatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaatg 20380139  T
Q  121 caa 123  Q
    |||    
T  20380140 caa 20380142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 32009996 - 32010121
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatca 96  Q
    |||||| |||||| ||||| |  |||||||||||||  |||| ||||||||||||||| ||||||||||     ||| |||| |||||||||| |||| |    
T  32009996 cctaaattataagcaaaaaaaattcattttctttgttccaaattataagtaaaaaagatcaacttttatcatatttaattatattttttcaaa-aaatta 32010094  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    |||||| ||| | ||||||||||||||    
T  32010095 tctttttcaaaggaaaattaaatgcaa 32010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 35832493 - 35832538
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  35832493 catctttccatgaaatttattccaaggagaacacaaaaaattatac 35832538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 38071666 - 38071586
Alignment:
Q  43 atataagtaaaaaagaccaacttttatgttatt--tatgttt-----tttcaaacaaatcatcttttccaatgtaaaatta 116  Q
    |||||| ||||||||| ||||||||||||||||  |||| ||     ||||||||||||||||||||||||||||||||||    
T  38071666 atataactaaaaaagagcaacttttatgttattattatgattatgtttttcaaacaaatcatcttttccaatgtaaaatta 38071586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 38549718 - 38549673
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||    
T  38549718 catctttccatgaaacttattccaaggagaatacaaaaaattatac 38549673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 44803979 - 44804024
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  44803979 catctttccattaaacttattccaaggagaacacaaaaaattatac 44804024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 10478259 - 10478303
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  10478259 catctttccatgaaacttatttcaaggagaacacaaaaaattata 10478303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 18454944 - 18455048
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatctttt 102  Q
    ||||||||| ||||| | |||||||||||||||  |||||||||| ||||||||  || |||||| |||||| || || |||| ||| ||||||||||||    
T  18454944 aaatataagaaaaaaaaactcattttctttgtcctaaaatataagcaaaaaagataaatttttattttatttaatcttgtttttaaaaaaatcatctttt 18455043  T
Q  103 ccaat 107  Q
    |||||    
T  18455044 ccaat 18455048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 28492605 - 28492645
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  28492605 tttccatgaaacttattccaaggagaacacaaaaaattata 28492645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 6110450 - 6110387
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  6110450 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 6110387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 33198915 - 33198852
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| || ||||||    
T  33198915 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaaattttat 33198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 44442049 - 44442150
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg--ttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 120  Q
    ||||||||||||||| |||| |||||| ||||| || ||||||||||   ||| ||||||||||| ||| |||| |||||||| || | |||||||||||    
T  44442049 ctcattttctttgtcccaaattataaggaaaaa-gagcaacttttattatttaattatgttttttgaaaaaaattatcttttctaaaggaaaattaaatg 44442147  T
Q  121 caa 123  Q
    |||    
T  44442148 caa 44442150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 4033750 - 4033705
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  4033750 catctttccatgaaacttattttaaggagaacacaaaaaattatac 4033705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 8784476 - 8784521
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||    
T  8784476 catctttccatgaaacttatttcaagaagaacacaaaaaattatac 8784521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 15068816 - 15068861
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||    
T  15068816 catctttctatgaaatttattccaagaagaacacaaaaaatcatac 15068861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 18833985 - 18833940
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||    
T  18833985 catctttccatgaaacttattccaagaataacacaaaaaattatac 18833940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 28424352 - 28424389
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaa 226  Q
    |||||||| |||||||||||||||||||||||||||||    
T  28424352 catctttccatgaaacttattccaaggagaacacaaaa 28424389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 43451586 - 43451631
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  43451586 catctttccatgaaacttattctaaggagaacacaaaaaatcatac 43451631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11031187 - 11031121
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||| |||||||||||| | ||||||| ||||| |||||| ||||||||||||||| ||||||||||    
T  11031187 cctaaattataagtaaaaaaa-ctcattt-ctttgactcaaattataagtaaaaaagatcaacttttat 11031121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 32273587 - 32273687
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    |||| ||||||||||  ||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| || |||||||| | |||||||||    
T  32273587 ctcaatttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatattttccaaaggaaaattaaa 32273685  T
Q  119 tg 120  Q
    ||    
T  32273686 tg 32273687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 5280761 - 5280698
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | || |||||||||||| ||||||||||| ||||||||| || ||||||    
T  5280761 aatataagcaaaaaaaacttattttctttgtcccaaaatataagcaaaaaagacaaatttttat 5280698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 28858189 - 28858252
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | |||||||||||||||  |||||||||| |||||| || |||||||||    
T  28858189 aatataagcaaaaataactcattttctttgtcctaaaatataagcaaaaaatacaaacttttat 28858252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 45660259 - 45660305
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||||||||||| |||||| || |||||||||    
T  45660259 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttat 45660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 9294622 - 9294675
Alignment:
Q  75 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||| ||||| | |||||||||||| ||| |||||||||||||||| ||||    
T  9294622 ttatgttatttcataaaaatcatctttttcaaagtaaaattaaatgcaaattgc 9294675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 13822845 - 13822800
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||    
T  13822845 catcttttcatgaaacttattctaagaagaacacaaaaaattatac 13822800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 29514094 - 29514049
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  |||||| |||||| |||||||||||||||||||||||    
T  29514094 catcttttcatgaaatttattctaaggagaacacaaaaaattatac 29514049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 29514550 - 29514505
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  ||||||||||||| ||||| |||||||||||||||||    
T  29514550 catcttttcatgaaacttattctaaggataacacaaaaaattatac 29514505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 33933100 - 33933055
Alignment:
Q  83 tttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||| |||||||||||||||| | ||||||||||| |||||||    
T  33933100 tttcaaaaaaatcatcttttccaaagaaaaattaaatgtaagttgc 33933055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 38071513 - 38071476
Alignment:
Q  201 aaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  38071513 aaacttattctaaggagaatacaaaaaattatacttca 38071476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 12872034 - 12872101
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 76  Q
    |||||| ||||| || ||||||||||| ||| ||||||||||| ||||| | |||||||||| ||||||    
T  12872034 tataagcaaaaaaatttcattttctttatcttaaaatataagt-aaaaatatcaacttttatattattt 12872101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 28599379 - 28599335
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||  ||||||||| |||||||||    
T  28599379 cattttctttgtcccaaaatataatcaaaaaagacaaacttttat 28599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 33635417 - 33635461
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| |||||| |||||||||| | ||||||||||||||||    
T  33635417 catctttccatgaaatttattccaagaaaaacacaaaaaattata 33635461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 41528186 - 41528230
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||| |||||| ||||||||||| ||||||||| |||||||||    
T  41528186 cattttgtttgtcccaaaatataagcaaaaaagacaaacttttat 41528230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 50768334 - 50768462
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  50768334 ctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatct 50768433  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||    
T  50768434 tttccaatgtaaaattaaatgcaagttgc 50768462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 55937935 - 55937807
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  55937935 cctaaaatataagcaaaaaaatctcattttctttgtcttaaaatataagcaaaaaagaccaacttttatgatatttttatgttttttcaaacaaatcatc 55937836  T
Q  99 ttttccaatgtaaaattaaatgcaagttg 127  Q
    |||||||||||||||||||||||||||||    
T  55937835 ttttccaatgtaaaattaaatgcaagttg 55937807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 52712951 - 52713080
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||||||||||||||||    
T  52712951 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagtaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatc 52713050  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  52713051 ttttccaatgtaaaattaaatgcaaattgc 52713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 37788341 - 37788468
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  37788341 taaaatataagcaaaaaaatatcattttctttatctcaaaatataagtaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatctt 37788440  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||| ||||    
T  37788441 ttccaatgtaaaattaaatgcaacttgc 37788468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 29899603 - 29899732
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||||||||| ||||| |||| ||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  29899603 cctaaaatataagcaaaaaaatctcattttgtttgtttcaacatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc 29899702  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  29899703 ttttccaatgtaaaattaaatgcaagttgc 29899732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32012559 - 32012430
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||  ||||||||||||||||||||||||    
T  32012559 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatc 32012460  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  32012459 tttttcaatgtaaaattaaatgcaaattgc 32012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 38940757 - 38940886
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||| |||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  38940757 cctaaaatataagcaaaaatatttcattttctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatc 38940856  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  38940857 ttttccaatgtaaaattaaatgcaaattgc 38940886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 53677710 - 53677582
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatct 99  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||  ||||||||||||||||||||||||    
T  53677710 ctaaaatataaataaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaaccaacttttatgctattattatgttttttcaaacaaatcatct 53677611  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||| ||||    
T  53677610 tttccaatgtaaaattaaatgcaaattgc 53677582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 29180644 - 29180515
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||| |||| |||    
T  29180644 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagacaaacttttatgttattattatgttttttcaaagaaattatc 29180545  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  29180544 ttttccaatgtaaaattaaatgcaaattgc 29180515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 30776716 - 30776587
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||| |||    
T  30776716 cctaaaatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatc 30776617  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  30776616 ttttccaatgtaaaattaaatgcaaattgc 30776587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 30777375 - 30777504
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||| |||    
T  30777375 cctaaaatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatc 30777474  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  30777475 ttttccaatgtaaaattaaatgcaaattgc 30777504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 38187958 - 38187829
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||  ||||| |||||||||||||||||    
T  38187958 cctaaaatacaaacaaaaaaatctcattttctttatctcaaaatataagtaaaaaagatcaacttttatgctattagtatgtattttcaaacaaatcatc 38187859  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  38187858 ttttccaatgtaaaattaaatgcaagttgc 38187829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27750580 - 27750451
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || ||||||||||| |||||||||||||| | || ||||||||||||||| |||||  ||||| ||||||||||||||||    
T  27750580 cctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcataacagaccaacttttatgctatttttatgttatttcaaacaaatcatc 27750481  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  27750480 ttttccaatgtaaaattaaatgcaagttgc 27750451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 39970221 - 39970092
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||| |||  |||||||||||||| |||||||||    
T  39970221 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaccaaatcatc 39970122  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  39970121 ttttccaatgtaaaattaaatgcaaattgc 39970092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1619917 - 1620046
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||  | |||| ||||||||||||| |||  |||| |||||||||||||||||||    
T  1619917 cctaaaatataagtaaaaaaatctcatattctttgtctcaaaatataatcataaaacaccaacttttatgctattattatattttttcaaacaaatcatc 1620016  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  1620017 tttttcaatgtaaaattaaatgcaatttgc 1620046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3043399 - 3043270
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| |||||  | |||| |||||||||||||||||||||  ||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  3043399 cctaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcgaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatc 3043300  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  3043299 ttttccaatgtaaaattaaatgcaaattgc 3043270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 10591734 - 10591606
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||| ||||||||| || ||||||| ||||  |||||||||||||||||||||||    
T  10591734 cctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataag-aaaaaagactaatttttatgctattattatgttttttcaaacaaatcatc 10591636  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  10591635 ttttccaatgtaaaattaaatgcaaattgc 10591606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43980387 - 43980515
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| |||||  |||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||  ||| |||||||||||||||||||    
T  43980387 cctaaaatataagaaaaaat-tctcatattctttgtcttaaaatataagtaaaaaataccaacttttatgctattattatattttttcaaacaaatcatc 43980485  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  43980486 ttttccaatgtaaaattaaatgcaaattgc 43980515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9798307 - 9798183
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| |||||  |||||| |||||| ||| |||||||||| |||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  9798307 cctaaaatataagcaaaaaattctcatattctttatcttaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatc 9798208  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||||||||||||||||||    
T  9798207 ttttccaatgtaaaattaaatgcaa 9798183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 49901917 - 49902044
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaa-cttttatgttatt--tatgttttttcaaacaaatcatctt 100  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | ||| |||||||||||||  |||||||||||||||||||||||||    
T  49901917 aaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaaacaaacttttatgttattattatgttttttcaaacaaatcatctt 49902016  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||| ||||||||||||||| ||||    
T  49902017 ttccaatataaaattaaatgcaaattgc 49902044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 51495079 - 51495166
Alignment:
Q  40 aaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||| |||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  51495079 aaaatataagcaaaaaagatcaacttttatgctatt-atgtttttttaaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 51495166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 5222529 - 5222396
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt-----caaacaaat 94  Q
    ||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||  |||  |||||||||||      ||| ||||    
T  5222529 ctaaattataagtaaaaaaatctcattttctttgtcctaaaatataagtaaaaaagaccaacttttatactattattatgtttttttaaaaaaaaaaaat 5222430  T
Q  95 catcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||| |||||||| |||||||||||||||| ||||    
T  5222429 cattttttccaaagtaaaattaaatgcaaattgc 5222396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 30012178 - 30012055
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt--caaacaaatcatcttttc 103  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||| |||||||| ||||||||||  |||  |||||||||||   ||| |||||||| ||||    
T  30012178 tataagcaaaaaaatcacattttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttaaaaaaaaaatcatc-tttc 30012080  T
Q  104 caatgtaaaattaaatgcaagttgc 128  Q
    ||| |||||||||||||||| ||||    
T  30012079 caaagtaaaattaaatgcaaattgc 30012055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 23978375 - 23978250
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatca 96  Q
    |||||| |||||| ||||| | |||||||||||| || |||| ||||||  ||||||||||||||||||     ||| ||||||||||||||| |||| |    
T  23978375 cctaaattataagcaaaaaaaactcattttctttatcccaaattataagcgaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaatta 23978277  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||| | ||||||||||||||    
T  23978276 tcttttccaaagaaaaattaaatgcaa 23978250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 29180454 - 29180409
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29180454 catctttctatgaaacttattccaaggagaacacaaaaaattatac 29180409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 47807159 - 47807212
Alignment:
Q  75 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  47807159 ttatgttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaattgc 47807212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 8013327 - 8013219
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||     ||| |||| |||||||||| |||| |||||||||||   |||||||||    
T  8013327 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattttttcaaa-aaattatcttttccaagtaaaaattaaa 8013229  T
Q  119 tgcaagttgc 128  Q
    ||||| ||||    
T  8013228 tgcaatttgc 8013219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 39078035 - 39078098
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  39078035 aatataagcaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 39078098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 48793901 - 48793797
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 100  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||| | ||||||| |||||||||  ||||||    ||||||||  || ||||||||||    
T  48793901 aaatataagtaaaaaaaactcattttctttgtcccaaaatataagcataaaagacaaacttttattctatttaatcttgtttttt--aaaaaatcatctt 48793804  T
Q  101 ttccaat 107  Q
    |||||||    
T  48793803 ttccaat 48793797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 10591545 - 10591500
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  10591545 catctttccatgaaacttattccaaggagaacacaaaaaattatac 10591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 30776526 - 30776481
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  30776526 catctttccatgaaacttattccaaggagaacacaaaaaattatac 30776481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 37788529 - 37788574
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  37788529 catctttccatgaaacttattccaaggagaacacaaaaaattatac 37788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 39970031 - 39969986
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39970031 catctttccatgaaacttattccaaggagaacacaaaaaattatac 39969986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 47806787 - 47806860
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt 75  Q
    |||||||||||||||||| |  |||| ||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  47806787 ctaaaatataagtaaaaaaaattcatattctttgtctcaaaatataagcaaaaaagatcaatttttatgctatt 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 53677521 - 53677476
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  53677521 catctttctatgaaactcattccaaggagaacacaaaaaattatac 53677476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17187061 - 17186993
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||| |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  17187061 cctataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 17186993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 16605109 - 16605038
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    ||||||||  |||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||    
T  16605109 aatataagctaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatgctattta 16605038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 37911798 - 37911901
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||     ||| ||||||||||||||| | || ||||||||||| | |||||||||    
T  37911798 ctcattttctttgtcccaaattataagtaaaaaagactaaattttatcatatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaa 37911896  T
Q  119 tgcaa 123  Q
    |||||    
T  37911897 tgcaa 37911901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 53848366 - 53848484
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttc 103  Q
    |||||| ||||| | ||||| ||||||||| |||| ||||||||||||||||||||||||||     ||| |||| || ||||||| ||||||||||||     
T  53848366 tataagaaaaaaaaactcatcttctttgtcccaaattataagtaaaaaagaccaacttttatcaaatttaattatattgtttcaaa-aaatcatcttttt 53848464  T
Q  104 caatgtaaaattaaatgcaa 123  Q
    ||| | |||| |||||||||    
T  53848465 caaagaaaaaataaatgcaa 53848484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 29899793 - 29899838
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  29899793 catctttccataaaacttattccaaggagaacacaaaaaattatac 29899838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 30777565 - 30777610
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  30777565 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 30777610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 35311018 - 35310913
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 100  Q
    ||||||||| |||||   |||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||    |||||||| ||| ||||||||||    
T  35311018 aaatataagcaaaaaatactcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttt-aaaaaaatcatctt 35310920  T
Q  101 ttccaat 107  Q
    || ||||    
T  35310919 tttcaat 35310913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 38940947 - 38940992
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  38940947 catcttttaatgaaacttattccaaggagaacacaaaaaattatac 38940992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 47516427 - 47516330
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 119  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||     ||| ||||||| ||||||| |||| ||||||||||| | ||||||||||    
T  47516427 cattttctttgtcccaaattataagcaaaaaagaccaacttttattacatttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaat 47516330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 47807273 - 47807318
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  47807273 catctttccatgaaacttattccaaagagaacacaaaaaattatac 47807318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 3043209 - 3043153
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttcatctcact 245  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  3043209 catctttccatgaaacttatttcaaggagtacacaaaaaattatacctcaactcact 3043153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8178498 - 8178431
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||| |||||| ||||| |  ||||||||||||||||||| |||||| |||||||||||||||||||    
T  8178498 cctaaattataaggaaaaaaaattcattttctttgtctcaaattataag-aaaaaagaccaacttttat 8178431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 41414833 - 41414789
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  41414833 cattttctttgtcccaaaatataagtaaaaaagacaaacttttat 41414789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 42915406 - 42915470
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||| ||||| | || |||||||||||| ||||||||||| ||||||||| |||||||||    
T  42915406 aaatataagcaaaaaaaactaattttctttgtcccaaaatataagcaaaaaagacaaacttttat 42915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 50768523 - 50768567
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  50768523 catctttccatgaaacttattccaaggaaaacacaaaaaattata 50768567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 14332668 - 14332731
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  14332668 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 14332731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 9798117 - 9798072
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||    
T  9798117 catctttccatgaaacttatttcaaggagaacgcaaaaaattatac 9798072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 17236334 - 17236293
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  17236334 tttctatgaaacttatttcaagaagaacacaaaaaattatac 17236293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 28681737 - 28681782
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || |||||||||| |||||||||||||||||||||||    
T  28681737 catctttccataaaacttattctaaggagaacacaaaaaattatac 28681782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 35529551 - 35529612
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  35529551 tataagcaaaaaaaacgcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 35529612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 52713137 - 52713182
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  52713137 tttccatgaaacttattccaagaaaaacacaaaaaattatacttca 52713182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 55580562 - 55580607
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaactttta 68  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  55580562 ctcattttctttgtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 2229175 - 2229219
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  2229175 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 26916253 - 26916297
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||    
T  26916253 cattttctttgtctcaaaatataagcaaaaaagataaacttttat 26916297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 28318655 - 28318555
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    ||||||||||||||| |||| | |||| |||||| || |||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||    
T  28318655 ctcattttctttgtcccaaattgtaagcaaaaaaaactaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 28318557  T
Q  119 tg 120  Q
    ||    
T  28318556 tg 28318555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 5842016 - 5841971
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||| |||||||||||||||  |||||||||    
T  5842016 tcattttctttgtctaaaattataagtaaaaaagattaacttttat 5841971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 30011996 - 30011951
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||||||  | |||||||||||||||||    
T  30011996 catctttccatgaaacttattccaaaaataacacaaaaaattatac 30011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 32012369 - 32012324
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||| |  |||||||||||||||||||||||    
T  32012369 catctttccatgaaacttaatttaaggagaacacaaaaaattatac 32012324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 43980576 - 43980621
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  |||||||||||| ||||||||||||||||| ||||||    
T  43980576 catcttttcatgaaacttatttcaaggagaacacaaaaatttatac 43980621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 49902105 - 49902154
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||  ||||||||||||||||  |||||| ||||||||||||||||    
T  49902105 catcttttcatgaaacttattccaactagaacataaaaaattatacttca 49902154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 55937741 - 55937700
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  55937741 tttccatgaaacttatttcaaggagaacacaaaaacttatac 55937700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 5222327 - 5222291
Alignment:
Q  197 tatgaaacttattccaaggagaacacaaaaaattata 233  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  5222327 tatgaaacttatttcaagaagaacacaaaaaattata 5222291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 24940281 - 24940313
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaa 56  Q
    ||||||||||||||||||||| |||||||||||    
T  24940281 tcattttctttgtctcaaaatgtaagtaaaaaa 24940313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 28142860 - 28142756
Alignment:
Q  23 ctcattttctttgtctcaaaatataag-taaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaa 117  Q
    ||||||||||||||  |||| ||||||  |||||| | ||||||||||     ||| ||||||||||||||| |||| ||||||||||| | ||||||||    
T  28142860 ctcattttctttgttccaaattataagcaaaaaaaaatcaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaa 28142762  T
Q  118 atgcaa 123  Q
    ||||||    
T  28142761 atgcaa 28142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 47867807 - 47867851
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||||  |||||||||    
T  47867807 cattttctttgtcccaaaatataagcaaaaaagaaaaacttttat 47867851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24612747 - 24612618
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  24612747 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 24612648  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||||||||    
T  24612647 tttttcaatgtaaaattaaatgcaagttgc 24612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25321853 - 25321724
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  25321853 cctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc 25321754  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  25321753 ttttccaatgtaaaattaaatgcaagttgc 25321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11043951 - 11044080
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||| |||||||     
T  11043951 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaataaatcata 11044050  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  11044051 ttttccaatgtaaaattaaatgcaagttgc 11044080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27752480 - 27752609
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||  |||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  27752480 cctaaaatataagcaaaaaaatatcattttctttgtctcaaaatataaacaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc 27752579  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  27752580 ttttccaatgtaaaattaaatgcaagttgc 27752609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 33851290 - 33851161
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||| |||||  ||||||||||||||||||||||    
T  33851290 cctaaaatataagcaaaaaaatctcattttctttgcctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc 33851191  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  33851190 ttttccaatgtaaaattaaatgcaagttgc 33851161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36537952 - 36538081
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||  |||||||||||||||||||||||||    
T  36537952 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctatttttatgttttttcaaacaaatcatc 36538051  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  36538052 ttttccaatgtaaaattaaatgcaatttgc 36538081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 35259951 - 35260075
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  35259951 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 35260050  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||||||||||||||||||    
T  35260051 ttttccaatgtaaaattaaatgcaa 35260075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 32678774 - 32678647
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| || ||||||||||||| | |||||||||| ||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  32678774 taaaatataagcaaaaaaatatcattttctttgttttaaaatataagcaaaaaagataaacttttatgttattattatgttttttcaaacaaatcatctt 32678675  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||    
T  32678674 ttccaatgtaaaattaaatgcaagttgc 32678647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 27621027 - 27621153
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttt 101  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||| ||||||||| |||||||||| ||||  ||||||||||||||||||||||||||    
T  27621027 aaaatataagcaaaaaaatctcatattctttgtctcaatatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttt 27621126  T
Q  102 tccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||| ||||    
T  27621127 tccaatgtaaaattaaatgcaaattgc 27621153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 44052514 - 44052644
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcat 97  Q
    ||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  44052514 cctaagatataagcaaaaaaatctcattttctttatctcaaaatataagcaaaaaaaaccaacttttatgttattattatgtttttttcaaacaaatcat 44052613  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||| ||||    
T  44052614 cttttccaatgtaaaattaaatgcaaattgc 44052644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 37597964 - 37598093
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||   |||||| ||||||||||||||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||     
T  37597964 cctaaaatataagcaaaacattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttgttattatgttttttcaaacaaatcatt 37598063  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  37598064 ttttccaatgtaaaattaaatgcaaattgc 37598093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 3099848 - 3099976
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcatct 99  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||| | |||||||| |||  ||||| ||||||||||||||||||||    
T  3099848 taaaatataagcaaaaaaatctcattttctttgtttcaaaatataagcaaaaaagacaatcttttatgctattattatgtttttttcaaacaaatcatct 3099947  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||| ||||    
T  3099948 tttccaatgtaaaattaaatgcaaattgc 3099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 35346569 - 35346442
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| |||||  |||||| |||||||||||||||||||| ||||||||| ||||||||||| |||  ||||||||||||||||||||||||||    
T  35346569 taaaatataagcaaaaaattctcatattctttgtctcaaaatataaataaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatctt 35346470  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    || |||||||||||| ||||||| ||||    
T  35346469 tttcaatgtaaaattgaatgcaaattgc 35346442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35344260 - 35344390
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatca-t 97  Q
    ||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||| ||||||| |||  |||||||||||||||||||||| |    
T  35344260 cctaaaatataagcaaaaatttctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatt 35344359  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
     |||| |||||||||||||||||||| ||||    
T  35344360 ttttttcaatgtaaaattaaatgcaaattgc 35344390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11992621 - 11992751
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttt-ttcaaacaaatcat 97  Q
    ||||||||||||| ||||| || |||| |||||||| | |||||||||| |||||| ||| ||||||||| ||||  |||||||| ||||||||||||||    
T  11992621 cctaaaatataagcaaaaaaatttcatattctttgtattaaaatataagcaaaaaaaacctacttttatgctattattatgtttttttcaaacaaatcat 11992720  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||| ||||    
T  11992721 cttttccaatgtaaaattaaatgcaaattgc 11992751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 44411477 - 44411347
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa-gaccaacttttatgttatt--tatgttttttcaaacaaatcat 97  Q
    |||||||||||||  ||||  |||||| |||||| |||||||||||||| |||||| |||||||||||||| ||||  ||| ||||||||||||||||||    
T  44411477 cctaaaatataagctaaaaattctcatattctttttctcaaaatataagcaaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat 44411378  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||| |||||||||||||||||||| ||||    
T  44411377 ctttttcaatgtaaaattaaatgcaaattgc 44411347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 39187129 - 39187256
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaa-cttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    |||||||||||| ||||| ||||||| ||||  ||||||||||||||| |||||| | ||| |||||||| ||||  |||||||||||||||||||||||    
T  39187129 ctaaaatataagcaaaaaaatctcatattct--gtctcaaaatataagcaaaaaaaaacaaacttttatgctattattatgttttttcaaacaaatcatc 39187226  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
     |||||||||||||||||||||||| ||||    
T  39187227 atttccaatgtaaaattaaatgcaaattgc 39187256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 44358716 - 44358629
Alignment:
Q  43 atataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||| |||||||| ||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44358716 atataagcaaaaaagatcaacttttatgttattattacgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 44358629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 17713116 - 17713240
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcat 97  Q
    ||||| |||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||     ||| |||| || |||| ||||||| ||    
T  17713116 ctaaattataagtaaaaaaaactcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattgtttc-aacaaattat 17713214  T
Q  98 cttttccaatgtaaaattaaatgcaa 123  Q
    ||||||||| | ||||||||||||||    
T  17713215 cttttccaaaggaaaattaaatgcaa 17713240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 37567648 - 37567569
Alignment:
Q  51 aaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||| ||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  37567648 aaaaaataccaacttttatgctattattatgttttttcagacaaatcatcttttccaatgtaaaattaaatgcaaattgc 37567569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 24510944 - 24510876
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 76  Q
    |||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  24510944 tataagcaaaaaaatctcattttctttgtcccaaaatataagttaaaaagaccaatttttatgttattt 24510876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 31133219 - 31133167
Alignment:
Q  76 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31133219 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 31133167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 31133847 - 31133765
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt 85  Q
    ||||||||| ||||| || |||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||    
T  31133847 aaatataagcaaaaaaatttcatattctttgtctcaaaatataagaaaaaaagaccaacttttatgctattgttatgtttttt 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 16635489 - 16635585
Alignment:
Q  21 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttt-ttcaaacaaatcatcttttccaatgtaaaatt 115  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||  |||||||| |||||| ||||||||||||| || ||||||||    
T  16635489 atctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttcttcaaa-aaatcatcttttcaaaagtaaaatt 16635585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 40487939 - 40487803
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaa---------cttttatgttatt--tatgttttttcaaac 90  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||| |  ||         ||||| || ||||  ||||||||| |||||    
T  40487939 ctaaaatataagcaaaaaaatctcattttcttcgtctcaaaatataagcaaaaaaaaaaaatcaacttgacttttttgctattattatgttttt-caaac 40487841  T
Q  91 aaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  40487840 aaatcatcttttccaatgtaaaattcaatgcaagttgc 40487803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 12108069 - 12108192
Alignment:
Q  7 atataagtaaaaacatctcattttctttgtctcaaaatataag-taaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatcttttc 103  Q
    ||||||| ||||| ||||||| || ||| ||||||||||||||  |||||| |||||||||||||  ||  |||| |||||||||||||||||| ||||     
T  12108069 atataagcaaaaaaatctcatattttttatctcaaaatataagcaaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcat-ttttt 12108167  T
Q  104 caatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||| ||||||| ||||    
T  12108168 caatgtaaaattcaatgcaaattgc 12108192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 2238835 - 2238736
Alignment:
Q  15 aaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaatgtaaaat 114  Q
    ||||| |||||||||||||||||  |||||||||| ||||||||||||||| | |||||         ||||||| |||||||||||||||| |||||||    
T  2238835 aaaaaaatctcattttctttgtcctaaaatataagcaaaaaagaccaacttctgtgtta---------tttcaaaaaaatcatcttttccaaagtaaaat 2238745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 35525475 - 35525539
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  35525475 aaatataaggaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 35525539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 34890456 - 34890385
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  34890456 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 34890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 5217284 - 5217414
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatca 96  Q
    |||||| |||||| ||||| | ||||||||||||||  |||| |||||| |||||||||||||||||||     ||| ||||||||||||||| | ||||    
T  5217284 cctaaactataagcaaaaaaaactcattttctttgtaccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-acatca 5217382  T
Q  97 tcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||| |||| |  ||||||||||||| ||||    
T  5217383 tctttcccaaggagaaattaaatgcaatttgc 5217414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 8673298 - 8673398
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttat--gttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 122  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||  ||||| |  || |||| ||| |||| ||||||||||| | |||||||||||||    
T  8673298 cattttctttgtcccaaattataagcaaaaaagaccaacttttatcatattttttagtgtttttaaaaaaattatcttttccaaaggaaaattaaatgca 8673397  T
Q  123 a 123  Q
    |    
T  8673398 a 8673398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 27621214 - 27621263
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27621214 catctttccatgaaacttattccaagtagaacacaaaaaattatacttca 27621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 27752670 - 27752715
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  27752670 catctttccatgaaacttattccaaggagaacacaaaaaattatac 27752715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 4047180 - 4047113
Alignment:
Q  3 taaaatata-agtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||| |||||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  4047180 taaaatatagagtaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 4047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 16635353 - 16635419
Alignment:
Q  21 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttttt 85  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||  ||||||||||    
T  16635353 atctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgtttttt 16635419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 13144226 - 13144180
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13144226 ctcattttctttgtctcaaaatataagcaaaaaagacaaacttttat 13144180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 3100037 - 3100082
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  3100037 catctttccatgaaacttattccaacgagaacacaaaaaattatac 3100082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 11044141 - 11044186
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  11044141 catctttacatgaaacttattccaaggagaacacaaaaaattatac 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 11992812 - 11992857
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  11992812 catcttttcatgaaacttattccaaggagaacacaaaaaattatac 11992857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 26954636 - 26954535
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt----tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 120  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||  ||||    |||||| ||||||| |||| |||||||||||   |||||||||||    
T  26954636 cattttctttgtcccaaattataagtaaaaaagaccaaattttatcatattttactatgttgtttcaaa-aaattatcttttccaaaagaaaattaaatg 26954538  T
Q  121 caa 123  Q
    |||    
T  26954537 caa 26954535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 31133106 - 31133061
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  31133106 catctttccatgaaatttattccaaggagaacacaaaaaattatac 31133061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 35260141 - 35260186
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  35260141 catctttccatgaaacttattccaaggagaacacaaaaaatgatac 35260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 35344451 - 35344496
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  35344451 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 35344496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 37567508 - 37567463
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  37567508 catctttccatgaaacttattccaaagagaacacaaaaaattatac 37567463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 37598153 - 37598198
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  37598153 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 37598198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 41426423 - 41426468
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  41426423 catctttccatgaaacttattccaagaagaacacaaaaaattatac 41426468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 44411286 - 44411237
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  44411286 catctttccatgaaacttatttcaaggagaatacaaaaaattatacttca 44411237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 34713511 - 34713551
Alignment:
Q  88 aacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  34713511 aacaaatcatcttttccaatgtaaaattaaatgcaaattgc 34713551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 7858437 - 7858500
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  7858437 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 7858500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 16635621 - 16635687
Alignment:
Q  21 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttttt 85  Q
    |||||||||| ||||||  ||||||||||||| ||||||||||||||||| ||||  ||||||||||    
T  16635621 atctcattttatttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgtttttt 16635687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 24892716 - 24892779
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | ||||||||||||||  ||||||||||| ||||||||| |||||||||    
T  24892716 aatataaggaaaaaaaactcattttctttgttccaaaatataagcaaaaaagacaaacttttat 24892779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 32678586 - 32678543
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattat 232  Q
    |||||||| ||||||||||||||||| |||||||||||||||||    
T  32678586 catctttccatgaaacttattccaagaagaacacaaaaaattat 32678543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 33851100 - 33851057
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattat 232  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  33851100 catctttccatgaaacttattccaaagagaacacaaaaaattat 33851057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 24612557 - 24612512
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||    
T  24612557 catcattccatgaaacttattccaaggagaacataaaaaattatac 24612512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 25321663 - 25321618
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||||||||||||| ||||||||||    
T  25321663 catctttccataaaacttattccaaggagaacacagaaaattatac 25321618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 35346381 - 35346336
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||    
T  35346381 catctttccatgaaatttatttcaaggagaacacaaaaaattatac 35346336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 44052717 - 44052750
Alignment:
Q  201 aaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||||||||||||||||||||||    
T  44052717 aaacttattccaaggagaacacaaaaaattatac 44052750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 7022635 - 7022591
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  7022635 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 7022591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 16643188 - 16643267
Alignment:
Q  47 aagtaaaaaagaccaacttttatgttatt--tatgttttttc-aaacaaatcatcttttccaatgtaaaattaaatgcaa 123  Q
    |||||| ||||| |||||||||| |||||  ||||||||||  ||||||||||||||||| || ||||||| ||||||||    
T  16643188 aagtaagaaagatcaacttttatcttattattatgttttttttaaacaaatcatcttttcaaaagtaaaataaaatgcaa 16643267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 41809090 - 41809022
Alignment:
Q  2 ctaaaatataagtaaaaacat-ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||| ||||| |  || ||||| |||||||||||||||||| ||||||||| |||||||||    
T  41809090 ctaaaatataagcaaaaaaaaacttattttttttgtctcaaaatataagcaaaaaagacaaacttttat 41809022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 8711754 - 8711817
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| |  ||||||| ||||||||||||||||| |||||||||| || ||||||    
T  8711754 aatataagcaaaaaaaattcattttatttgtctcaaaatataaataaaaaagacaaatttttat 8711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 38072114 - 38072157
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||| |||| |||||| |||||||||||||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttat 38072157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 13143659 - 13143705
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  13143659 ctcattttctttgtcccaaaatataagcaaaaaagataaacttttat 13143705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 36190666 - 36190712
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||||||||||| |||||||||  ||||||||    
T  36190666 ctcattttctttgtcccaaaatataagcaaaaaagacacacttttat 36190712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 41362888 - 41362846
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaactttta 68  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  41362888 attttctttgtcccaaattataagcaaaaaagaccaactttta 41362846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 13143847 - 13143896
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||| ||||||||||| || ||| || |||||||||||||||||||||    
T  13143847 catcttcctatgaaacttttttcaacgaaaacacaaaaaattatacttca 13143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 15824714 - 15824665
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||| ||||||||||||| || || ||||||||||| |||||||||    
T  15824714 catctttccatgaaacttattctaaagaaaacacaaaaaactatacttca 15824665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 29920345 - 29920296
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||| | |||||||||||||||| || ||||||||||||| |||||||    
T  29920345 catcttcccatgaaacttattccaaagataacacaaaaaattgtacttca 29920296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 40486569 - 40486524
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||    
T  40486569 catctttccttgaaacttattctaaggagaatacaaaaaattatac 40486524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 41426190 - 41426231
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataag 49  Q
    |||||| ||||| ||||||||||||||||| |||||||||||    
T  41426190 tataagcaaaaaaatctcattttctttgtcccaaaatataag 41426231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 44358556 - 44358523
Alignment:
Q  201 aaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||||| |||||||||||||||||||||||    
T  44358556 aaacttattctaaggagaacacaaaaaattatac 44358523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 12108248 - 12108288
Alignment:
Q  198 atgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  12108248 atgaaacttatttcaaagataacacaaaaaattatacttca 12108288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 16635757 - 16635860
Alignment:
Q  21 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttt--ttcaaacaaatcatcttttccaatgt-aaaatt 115  Q
    ||||||||| |||||||  ||||||||||    ||||||||| ||||||| ||||  ||||||||  |||||| ||||||||||||| || || ||||||    
T  16635757 atctcatttcctttgtcctaaaatataag----aaagaccaatttttatgctattactatgttttctttcaaaaaaatcatcttttcaaaagtaaaaatt 16635852  T
Q  116 aaatgcaa 123  Q
    ||||||||    
T  16635853 aaatgcaa 16635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17314723 - 17314790
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||| |||||| ||||| | ||||||||||||||  |||| |||||| |||||||| ||||||||||    
T  17314723 cctaaattataaggaaaaaaa-ctcattttctttgttccaaattataagcaaaaaagatcaacttttat 17314790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 41362497 - 41362450
Alignment:
Q  75 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 123  Q
    ||||||||||||||| |||| ||||||||||| | ||||||||||||||    
T  41362497 ttatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaa 41362450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 6e-49; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36576308 - 36576437
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||||||||| ||||||||    
T  36576308 cctaaaatataaggaaaaaaatctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaataaatcatc 36576407  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  36576408 ttttccaatgtaaaattaaatgcaagttgc 36576437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 44600336 - 44600465
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  44600336 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaataaatcatc 44600435  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||| ||||||||||||||||||||||    
T  44600436 ttttccagtgtaaaattaaatgcaagttgc 44600465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 43108130 - 43108000
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcat 97  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  43108130 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcat 43108031  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||| ||||    
T  43108030 cttttccaatgtaaaattaaatgcaaattgc 43108000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32491330 - 32491202
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgttttttcaaacaaatcatct 99  Q
    ||||||||||||| ||||| |||| ||||||||||||| |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  32491330 cctaaaatataagcaaaaaaatcttattttctttgtctgaaaatataagcaaaaaaaaccaacttttatgctattttatgttttttcaaacaaatcatct 32491231  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| ||||||||||||||||||||||||    
T  32491230 tttcgaatgtaaaattaaatgcaagttgc 32491202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 23731452 - 23731579
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||||| |||||||| ||||||||||| |||||  ||||||||||||||||||||||    
T  23731452 cctaaaatataagaaaaaaaatctcattttct--gtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc 23731549  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  23731550 ttttccaatgtaaaattaaatgcaagttgc 23731579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35181082 - 35181211
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| |||||||||||| |||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  35181082 cctaaaatataagcaaaaaaatctcatattctttgtctcagaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 35181181  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  35181182 tttttcaatgtaaaattaaatgcaaattgc 35181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 40560272 - 40560401
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||  |||||||||| | ||||||| |||||  ||||||||||||||||||||||    
T  40560272 cctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataatcaaaaaagacccatttttatgctatttttatgttttttcaaacaaatcatc 40560371  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  40560372 ttttccaatgtaaaattaaatgcaagttgc 40560401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 41815917 - 41815788
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||| |||||||     
T  41815917 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcata 41815818  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||| |||||||    
T  41815817 ttttccaatgtaaaattaaatgtaagttgc 41815788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 45598794 - 45598923
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||| ||||  |||||||||||||||||||||||    
T  45598794 cctaaaatataagcaaaaaaatctcatgttctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaatcatc 45598893  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  45598894 ttttccaatgtaaaattaaatgcaaattgc 45598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 3157327 - 3157455
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||||| ||||||||| |||||||||| ||||  ||||| ||||||||||||||||||    
T  3157327 ctaaaatataagcaaaaaaatttcattttccttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtattttcaaacaaatcatct 3157426  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||    
T  3157427 tttccaatgtaaaattaaatgcaagttgc 3157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 19933278 - 19933150
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||| ||||||||  |||||||||| |||||  |||||||||||||||||||||||    
T  19933278 ctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatct 19933179  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||    
T  19933178 tttccaatgtaaaattaaatgcaagttgc 19933150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 19964417 - 19964289
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||| ||||||||  |||||||||| |||||  |||||||||||||||||||||||    
T  19964417 ctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatct 19964318  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||    
T  19964317 tttccaatgtaaaattaaatgcaagttgc 19964289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 34808110 - 34808238
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  34808110 ctaaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatct 34808209  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    ||| ||| |||||||||||||||| ||||    
T  34808210 ttttcaacgtaaaattaaatgcaaattgc 34808238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 9818372 - 9818491
Alignment:
Q  3 taaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttt 101  Q
    ||||||||||| ||||| | ||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  9818372 taaaatataagcaaaaaaaatctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttttttttcaaacaaatcatcttt 9818471  T
Q  102 tccaatgtaaaattaaatgc 121  Q
    ||||||||||||||||||||    
T  9818472 tccaatgtaaaattaaatgc 9818491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 10720297 - 10720416
Alignment:
Q  3 taaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttt 101  Q
    ||||||||||| ||||| | ||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  10720297 taaaatataagcaaaaaaaatctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttttttttcaaacaaatcatcttt 10720396  T
Q  102 tccaatgtaaaattaaatgc 121  Q
    ||||||||||||||||||||    
T  10720397 tccaatgtaaaattaaatgc 10720416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 47383298 - 47383417
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| || ||| |||||||||||||||||||||| |||||| ||||||||||||| ||||  |||||||||||||||||||||||||    
T  47383298 taaaatataagcaaaaaaatatcactttctttgtctcaaaatataagcaaaaaataccaacttttatgatattattatgttttttcaaacaaatcatctt 47383397  T
Q  101 ttccaatgtaaaattaaatg 120  Q
    ||||||||||||||||||||    
T  47383398 ttccaatgtaaaattaaatg 47383417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 21654345 - 21654221
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||||||  |||||||||||||||||||  ||||| |||||||||||||| ||||  ||||||||||||||||||||| |    
T  21654345 cctaaaatataagcaaaaaaatctcataatctttgtctcaaaatataaacaaaaaggaccaacttttatgctattattatgttttttcaaacaaatcacc 21654246  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||||||||||||||||||    
T  21654245 ttttccaatgtaaaattaaatgcaa 21654221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 23106342 - 23106472
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa-gaccaacttttatgttatt--tatgttttttcaaacaaatcat 97  Q
    ||||||||||||| ||||| ||| ||| || |||||||||||||||||| |||||| ||| |||||||||| ||||  ||||||||||||||||||||||    
T  23106342 cctaaaatataagcaaaaaaatcacatattatttgtctcaaaatataagcaaaaaaagactaacttttatgctattattatgttttttcaaacaaatcat 23106441  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||| ||||    
T  23106442 cttttccaatgtaaaattaaatgcaaattgc 23106472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18206532 - 18206415
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| |||||| |||| ||         |||||||||||||||||||||||||||    
T  18206532 cctaaaatataagtaaaaaaatatcattttctttgtctcaaaatataagcaaaaaaaaccatct---------tttatgttttttcaaacaaatcatctt 18206442  T
Q  101 ttccaatgtaaaattaaatgcaagttg 127  Q
    || ||||||||||||||||||||||||    
T  18206441 tttcaatgtaaaattaaatgcaagttg 18206415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42617561 - 42617690
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| |||||| |||||||||||||| ||||||||| |||| ||||| |||  |||||||||||||||||||| ||     
T  42617561 cctaaaatataagcaaaaaaatctcatattctttttctcaaaatataagcaaaaaagacaaactcttatgatattattatgttttttcaaacaaattatt 42617660  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  42617661 tttttcaatgtaaaattaaatgcaaattgc 42617690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 48879298 - 48879407
Alignment:
Q  21 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    ||||||| || ||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||    
T  48879298 atctcatattttttatcttaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaaaaaaatcatctttttcaatgtaaaattaaa 48879397  T
Q  119 tgcaagttgc 128  Q
    ||||| ||||    
T  48879398 tgcaaattgc 48879407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 41889063 - 41889190
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||| |||||| | |||||||||||  |||  |||||||||||||||||||||||||    
T  41889063 taaaatataagcaaaaaaatatcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgccattattatgttttttcaaacaaatcatctt 41889162  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||| || |||| ||||    
T  41889163 ttccaatgtaaaattcaaagcaaattgc 41889190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 40583068 - 40583164
Alignment:
Q  34 tgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  40583068 tgtctcaaaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgc 40583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 22111514 - 22111425
Alignment:
Q  41 aaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  22111514 aaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgc 22111425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 48938111 - 48937984
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcat 97  Q
    ||||||||||||||||||| || |||| |||||||||| |||||||||| ||||   | |||||||| || |||  ||||| ||||||||||||||||||    
T  48938111 cctaaaatataagtaaaaaaatttcatattctttgtcttaaaatataagcaaaa---atcaacttttgtgctattattatgtttttttcaaacaaatcat 48938015  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||| ||| ||||    
T  48938014 cttttccaatgtaaaattaaatacaaattgc 48937984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 48943137 - 48943010
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcat 97  Q
    ||||||||||||||||||| || |||| |||||||||| |||||||||| ||||   | |||||||| || |||  ||||| ||||||||||||||||||    
T  48943137 cctaaaatataagtaaaaaaatttcatattctttgtcttaaaatataagcaaaa---atcaacttttgtgctattattatgtttttttcaaacaaatcat 48943041  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||| ||| ||||    
T  48943040 cttttccaatgtaaaattaaatacaaattgc 48943010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 30082261 - 30082372
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaat 107  Q
    |||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||         ||||||| ||||||||||||||||     
T  30082261 tataagcaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagaccaatttttatgtta---------tttcaaaaaaatcatcttttccaaa 30082351  T
Q  108 gtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||| ||||    
T  30082352 gtaaaattaaatgcaaattgc 30082372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7989516 - 7989425
Alignment:
Q  1 cctaaaatataagtaaaaaca--tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaa 88  Q
    ||||||||||||| ||||| |  ||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  7989516 cctaaaatataagcaaaaaaaaatctcattttatttgtttcaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaa 7989425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41890484 - 41890410
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt 75  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  41890484 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctatt 41890410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 18800980 - 18800912
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 76  Q
    |||||| ||||| ||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  18800980 tataagaaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagacatacttttatgttattt 18800912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 39348708 - 39348803
Alignment:
Q  30 tctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 123  Q
    |||||||  ||||||||||| |||||||||||||||||||| |||  || |||| ||||||| || | ||||||||||| ||||||||||||||||    
T  39348708 tctttgtaccaaaatataagcaaaaaagaccaacttttatgctattattgtgttgtttcaaaaaattaatcttttccaaagtaaaattaaatgcaa 39348803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 18206353 - 18206308
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  18206353 catctttccatgaaacttattccaaggagaacacaaaaaattatac 18206308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 35181272 - 35181317
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  35181272 catctttccatgaaacttattccaaggagaacacaaaaaattatac 35181317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 39337431 - 39337549
Alignment:
Q  15 aaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttc---aaacaaatcatcttttccaatgt 109  Q
    ||||| |||||| |||||||||| ||||||||||| |||||| ||||||||||||| |||  || |||| ||||   ||| ||||||||||||||||  |    
T  39337431 aaaaaaatctcagtttctttgtcccaaaatataagcaaaaaataccaacttttatgctattattgtgttgtttcaaaaaaaaaatcatcttttccaaatt 39337530  T
Q  110 aaaattaaatgcaagttgc 128  Q
    |||| ||||||||| ||||    
T  39337531 aaaactaaatgcaaattgc 39337549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 42617751 - 42617796
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  42617751 catctttccatgaaacttattccaaggagaacacaaaaaattatac 42617796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 43107939 - 43107894
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  43107939 catctttccatgaaacttattccaaggagaacacaaaaaattatac 43107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 47778651 - 47778755
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatctttt 102  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| || ||||||  ||||| || || |||| ||| ||||||||||||    
T  47778651 aaatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaatttttattctatttaatcttgtttttaaaaaaatcatctttt 47778750  T
Q  103 ccaat 107  Q
    |||||    
T  47778751 ccaat 47778755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 25944456 - 25944527
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    |||||||| ||||| |  |||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  25944456 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 25944527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 7989342 - 7989297
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  7989342 catctttccatgaaatttattccaaggagaacacaaaaaattatac 7989297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 19933089 - 19933044
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  19933089 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 19933044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 19964228 - 19964183
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  19964228 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 19964183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 40560462 - 40560507
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  40560462 catctttctataaaacttatttcaaggagaacacaaaaaattatac 40560507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 41815727 - 41815682
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  41815727 catctttccataaaacttattccaaggagaacacaaaaaattatac 41815682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 48879468 - 48879513
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  48879468 catctttctataaaacttattccaaggagaatacaaaaaattatac 48879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 48937923 - 48937878
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  48937923 catctttccataaaacttattccaaggagaacacaaaaaattatac 48937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 21654155 - 21654115
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaat 229  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21654155 catctttccatgaaacttattccaaggagaacacaaaaaat 21654115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 41890276 - 41890232
Alignment:
Q  190 atctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  41890276 atctttccatgaaacttatttcaaggagaacacaaaaaattatac 41890232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 16562659 - 16562722
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| || ||||||    
T  16562659 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttat 16562722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 16603003 - 16602940
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| || ||||||    
T  16603003 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttat 16602940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 18102440 - 18102503
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  18102440 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 18102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 33152941 - 33153058
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctttt 102  Q
    |||| |||||| ||||| || ||||||||||| ||  |||||||||  ||||||||||||||||||   ||||||     ||||||| |||| |||||||    
T  33152941 taaattataagcaaaaaaatatcattttctttatccaaaaatataaacaaaaaagaccaactttta---tattta-----tttcaaaaaaattatctttt 33153032  T
Q  103 ccaatgtaaaattaaatgcaagttgc 128  Q
     ||| |||||||||||||||| ||||    
T  33153033 tcaaagtaaaattaaatgcaaattgc 33153058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 46760487 - 46760444
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  46760487 attttctttgtcccaaaatataagtaaaaaagacaaacttttat 46760444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 47557977 - 47557930
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtt 72  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  47557977 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatgtt 47557930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 3157516 - 3157561
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||| ||||||||||||||||||||    
T  3157516 catctttccatgaaacttatttcaaagagaacacaaaaaattatac 3157561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 9818548 - 9818593
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||    
T  9818548 catctttccataaaacttattccaaggagaacataaaaaattatac 9818593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 10720473 - 10720518
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||    
T  10720473 catctttccataaaacttattccaaggagaacataaaaaattatac 10720518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 22369145 - 22369250
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 121  Q
    ||||||||||| ||||| |||||| |||||| || |||||||||     ||| ||||||||||||||| ||||||||||||| || |  |||||||||||    
T  22369145 attttctttgtatcaaattataagaaaaaaaaactaacttttatcatatttaattatgttttttcaaa-aaatcatcttttcaaaggagaaattaaatgc 22369243  T
Q  122 aagttgc 128  Q
    || ||||    
T  22369244 aatttgc 22369250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 23106533 - 23106578
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  23106533 catctttccatgaaacttattttaaggagaacacaaaaaattatac 23106578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 23731640 - 23731685
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||    
T  23731640 catctctccatgaaacttattccaaggagaacacaaaaaatcatac 23731685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 29236242 - 29236205
Alignment:
Q  39 caaaatataagtaaaaaagaccaacttttatgttattt 76  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  29236242 caaaatataagcaaaaaagaccaacttttatgttattt 29236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 32491141 - 32491096
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  32491141 catctttccatgaaacttattataaggagaacacaaaaaattatac 32491096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 34808299 - 34808344
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||    
T  34808299 catctttccatgaaactttttccaagaagaacacaaaaaattatac 34808344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 41889251 - 41889296
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||    
T  41889251 catctttccatgaaacttatttcaaggagaatacaaaaaattatac 41889296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 41890391 - 41890342
Alignment:
Q  75 ttatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatgcaa 123  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  41890391 ttatgtttttttcaaacaaatcatcttttttaatgtaaaattaaatgcaa 41890342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 44600526 - 44600571
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||    
T  44600526 catctttccttgaaacttattctaaggagaacacaaaaaattatac 44600571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 47383486 - 47383530
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||    
T  47383486 catctttccatgaaacttattttaaggagaacacaaaaaattata 47383530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 14805781 - 14805844
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| |||| |||| |||||||||    
T  14805781 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttat 14805844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 15252775 - 15252838
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| |||| |||| |||||||||    
T  15252775 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttat 15252838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 21761998 - 21761947
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagac 59  Q
    |||||| || || |||||||||| ||||||||||| ||||||||||||||||    
T  21761998 tataagcaataaaatctcattttttttgtctcaaattataagtaaaaaagac 21761947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 24151820 - 24151777
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||| |||| |||||| |||||||||||||||||||    
T  24151820 attttctttgtcccaaattataagcaaaaaagaccaacttttat 24151777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 35069096 - 35069013
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatcttttccaa 106  Q
    |||||| |||||| ||||||||||||||||| ||| |||||||||  ||||| || || |||| ||| ||||||||||||||||    
T  35069096 cattttttttgtcccaaaatataagtaaaaatgacaaacttttatcctatttaatcttgttttaaaaaaaatcatcttttccaa 35069013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 39174181 - 39174224
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||  ||||||||||||||||||||| |||||||||    
T  39174181 attttctttgttccaaaatataagtaaaaaagacaaacttttat 39174224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 6190925 - 6190975
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 56  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||    
T  6190925 aatataagcaaaaaaaactcattttctttgtcccaaaatataagaaaaaaa 6190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 234
Target Start/End: Complemental strand, 22111348 - 22111319
Alignment:
Q  205 ttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||||||||||||||||||    
T  22111348 ttattccaaggagaacacaaaaaattatac 22111319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 29236098 - 29236057
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  29236098 tttctatgaaacttattccaaaaagaatacaaaaaattatac 29236057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 33153119 - 33153168
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||||||| || ||| ||||| |||| |||||||||||||||||||||||    
T  33153119 catctttccataaaatttatttcaagaagaacacaaaaaattatacttca 33153168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 35084249 - 35084196
Alignment:
Q  75 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||| |||| | |||||||| ||||||| |||||||||||||||| ||||    
T  35084249 ttatgtttcttcataaaaatcatcctttccaaagtaaaattaaatgcaaattgc 35084196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 35888210 - 35888110
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 120  Q
    |||||| |||||| |||| |||||| |||||||||||||||| ||     ||| ||||||||||||||| |||| ||||||||||| | ||||| |||||    
T  35888210 cattttatttgtcccaaattataag-aaaaaagaccaactttcatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaataaaatg 35888113  T
Q  121 caa 123  Q
    |||    
T  35888112 caa 35888110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 36576498 - 36576542
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||    
T  36576498 catctttccatgaaacttattctaaggagaa-acaaaaaattatac 36576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 234
Target Start/End: Original strand, 40583241 - 40583270
Alignment:
Q  205 ttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||||||||||||||||||    
T  40583241 ttattccaaggagaacacaaaaaattatac 40583270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 22631966 - 22632030
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||| ||||| | ||||||||||||||   |||||||||| ||||| ||| |||||||||    
T  22631966 aaatataagcaaaaaaaactcattttctttgttctaaaatataagcaaaaaggacaaacttttat 22632030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 35084135 - 35084091
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    ||||||| ||||||||||||| |||| ||||||||||||| ||||    
T  35084135 catctttttatgaaacttatttcaagaagaacacaaaaaactata 35084091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 38260231 - 38260335
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaactttt-atgttattta----tgttttttcaaacaaatcatcttttccaatgtaaaattaa 117  Q
    ||||||||||||||| |||| ||||||||||||| || ||||||| ||| ||||||    | || ||||||| |||| |||||||||||   ||||||||    
T  38260231 ctcattttctttgtcccaaattataagtaaaaaatacaaactttttatgatatttaattatattgtttcaaa-aaattatcttttccaaatgaaaattaa 38260329  T
Q  118 atgcaa 123  Q
    ||||||    
T  38260330 atgcaa 38260335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 49924310 - 49924437
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  |||||||||||||||||||||||||    
T  49924310 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc 49924409  T
Q  99 ttttccaatgtaaaattaaatgcaagtt 126  Q
    ||||||||||||||||||||||||||||    
T  49924410 ttttccaatgtaaaattaaatgcaagtt 49924437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 29488639 - 29488768
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||| ||     
T  29488639 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaataata 29488738  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  29488739 ttttccaatgtaaaattaaatgcaagttgc 29488768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 38942710 - 38942581
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||  |||||||||||||||||||||||     
T  38942710 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatt 38942611  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  38942610 ttttccaatgtaaaattaaatgcaagttgc 38942581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 40935882 - 40935753
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||||||| |||||||||||||||    
T  40935882 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttcttcaaacaaatcatc 40935783  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  40935782 ttttccaatgtaaaattaaatgcaagttgc 40935753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 40960743 - 40960614
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  |||||||||||||||||||||||||    
T  40960743 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc 40960644  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||||||||    
T  40960643 tttttcaatgtaaaattaaatgcaagttgc 40960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 44875070 - 44875199
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  44875070 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 44875169  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  44875170 ttttccaatgtaaaattaaatgcaaattgc 44875199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 46949212 - 46949336
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46949212 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc 46949311  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||| ||||||||||||||||||||    
T  46949312 tttttcaatgtaaaattaaatgcaa 46949336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 26907356 - 26907229
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||    
T  26907356 taaaatataagcaaaaaaatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttttttcaaacaaattatctt 26907257  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    || |||||||||||||||||||| ||||    
T  26907256 tttcaatgtaaaattaaatgcaaattgc 26907229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31970577 - 31970449
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||  |||| |||||||||||||||||    
T  31970577 cctaaaatataagcaaaaaaatctcattttctttgtatcaaaatataag-aaaaaagatcaacttttatgttatttttatgtcttttcaaacaaatcatc 31970479  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  31970478 ttttccaatgtaaaattaaatgcaagttgc 31970449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 23874093 - 23873967
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttt 101  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  23874093 aaaatataagcaaaaaaatctcatattctttgtctcaaaatatacgcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttt 23873994  T
Q  102 tccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||| ||||    
T  23873993 tccaatgtaaaattaaatgcaaattgc 23873967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 18036436 - 18036564
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  18036436 cctaaaatataaacaaaaatatctcattttctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 18036534  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||| |||||||||||||||| ||||    
T  18036535 ttttccaaagtaaaattaaatgcaaattgc 18036564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25990640 - 25990768
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| | ||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||  |||||||||||||||||||||||    
T  25990640 cctaaaatataagcaaaaaaa-ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatc 25990738  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  25990739 ttttccaatgtaaaattaaatgcaaattgc 25990768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 9127936 - 9128055
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||| |||||||||||||||||||||    
T  9127936 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatctt 9128035  T
Q  101 ttccaatgtaaaattaaatg 120  Q
    || |||||||||||||||||    
T  9128036 tttcaatgtaaaattaaatg 9128055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 15285697 - 15285824
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||  ||  ||||||||||||||||||||||||||    
T  15285697 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgccattattatgttttttcaaacaaatcatctt 15285796  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    || |||||||||||||||||||| ||||    
T  15285797 tttcaatgtaaaattaaatgcaaattgc 15285824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 28017551 - 28017678
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 100  Q
    |||||||||| ||||||  |||||| |||||| |||||||||||||| |||||||| ||||||||||| ||||  |||||||||||||||||||||||||    
T  28017551 taaaatataaataaaaaattctcatattctttatctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatctt 28017650  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||| ||||    
T  28017651 ttccaatgtaaaattaaatgcaaattgc 28017678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 39026512 - 39026386
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||| ||||||| ||    
T  39026512 taaaatataagcaaaaaaatttcatttt-tttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaataaatcatatt 39026414  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||    
T  39026413 ttccaatgtaaaattaaatgcaagttgc 39026386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 43656303 - 43656177
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | |||||||||||| |||  |||||||||||||||||||||||||    
T  43656303 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataaggaaaaaa-atcaacttttatgtcattattatgttttttcaaacaaatcatctt 43656205  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||| ||||    
T  43656204 ttccaatgtaaaattaaatgcaaattgc 43656177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 45358143 - 45358016
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||| ||  |||||||| ||||||||||||||||||    
T  45358143 taaaatataagcaaaaaaatctaattttctttgtctcaaaatataagcaaaaaaaaccaacttttatgctatttttatgttatttcaaacaaatcatctt 45358044  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||| || |||||    
T  45358043 ttccaatgtaaaattaaatacatgttgc 45358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 28916781 - 28916655
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttt 101  Q
    |||||| ||| ||||| ||||||| || |||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||    
T  28916781 aaaatacaagcaaaaaaatctcatattttttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttt 28916682  T
Q  102 tccaatgtaaaattaaatgcaagttgc 128  Q
    |||||| ||||||||||||||| ||||    
T  28916681 tccaatataaaattaaatgcaaattgc 28916655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 40219948 - 40220076
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||| |||  |||||||||||||||||||| |||    
T  40219948 cctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaat-atc 40220046  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  40220047 ttttccaatgtaaaattaaatgcaaattgc 40220076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 18913611 - 18913486
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||||| ||||| ||| ||| |||  ||||||||||||||||||||||||||    
T  18913611 taaaatataagcaaaaaaatctcattttct--gtctcaaaatataagcaaaaaataccaattttgatgctatctttatgttttttcaaacaaatcatctt 18913514  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||    
T  18913513 ttccaatgtaaaattaaatgcaagttgc 18913486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 18852116 - 18852243
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| | |||||||| |||||||||| ||  |||||||||||||||||||| || ||    
T  18852116 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcataaaagacctacttttatgtcattattatgttttttcaaacaaattatttt 18852215  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||| ||||    
T  18852216 ttccaatgtaaaattaaatgcaaattgc 18852243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4529079 - 4529207
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || ||||||| |||||||||||||||||| |||||||| ||||||||||| ||||  |||||||||||||| |||||||     
T  4529079 cctaaaatataagaaaaaaaat-tcattttttttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcatt 4529177  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  4529178 ttttccaatgtaaaattaaatgcaaattgc 4529207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 35941739 - 35941861
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttcca 105  Q
    |||||| ||||| ||||||| ||||||||||||||||||||| |||||| | ||||||||||| ||||  ||||||||||||||||||||||||||| ||    
T  35941739 tataagaaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgctattattatgttttttcaaacaaatcatctttttca 35941838  T
Q  106 atgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||| ||| ||||    
T  35941839 atgtaaaattaaatacaaattgc 35941861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 26479632 - 26479751
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||  |||||| |||||||||||||  ||  |||| |||||||||||||||||||||    
T  26479632 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcatctt 26479731  T
Q  101 ttccaatgtaaaattaaatg 120  Q
    ||||||||||||||| ||||    
T  26479732 ttccaatgtaaaattcaatg 26479751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 47996847 - 47996965
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||||||||| ||||||| |||| |  || |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||||||||||    
T  47996847 cctaaaatataagtaaaaaaatctcatattctat--cttaaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaatcatc 47996944  T
Q  99 ttttccaatgtaaaattaaat 119  Q
    |||||||||||||||||||||    
T  47996945 ttttccaatgtaaaattaaat 47996965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 35189092 - 35189210
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcatc 98  Q
    |||||||||||| |||||  | | || ||||||||||||||||||||| |||||||||||||||||||| |||  ||||| ||||||||||||||| |||    
T  35189092 ctaaaatataagcaaaaattttttatattctttgtctcaaaatataagcaaaaaagaccaacttttatggtattattatgtttttttcaaacaaataatc 35189191  T
Q  99 ttttccaatgtaaaattaa 117  Q
    |||| ||||||||||||||    
T  35189192 tttttcaatgtaaaattaa 35189210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6848573 - 6848446
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcat 97  Q
    ||||||||||||| |||||  | |||| ||||||||||||||||||||| |||||||||    ||||||| |||  ||||| ||||||| ||||||||||    
T  6848573 cctaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcaaaaaagac---tttttatgctattattatgtttttttctaacaaatcat 6848477  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||| ||||||||||||||| ||||    
T  6848476 cttttccaatctaaaattaaatgcaaattgc 6848446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35884113 - 35884211
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 97  Q
    ||||||||||||| |||||  |||||| |||||| ||| |||||||||| |||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  35884113 cctaaaatataagcaaaaaattctcatattctttatcttaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat 35884211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36383819 - 36383948
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttc-aaacaaatcat 97  Q
    |||||| |||||| ||| | || | ||||| |||||| ||||||||||| |||||||| |||||||||||||||  |||||||||||| ||| |||||||    
T  36383819 cctaaattataagcaaagaaattttattttatttgtcacaaaatataagcaaaaaagatcaacttttatgttattattatgttttttctaaaaaaatcat 36383918  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    | ||||||| |||||||||||||||| ||||    
T  36383919 c-tttccaaagtaaaattaaatgcaaattgc 36383948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 44149114 - 44149010
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatctttt 102  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||  ||||| || || |||| ||| ||||||||||||    
T  44149114 aaatataagcaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgtttttaaaaaaatcatctttt 44149015  T
Q  103 ccaat 107  Q
    |||||    
T  44149014 ccaat 44149010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 15311110 - 15311192
Alignment:
Q  42 aatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 122  Q
    |||||||  |||||||| ||||||||||| | ||  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  15311110 aatataaacaaaaaagatcaacttttatgctgttattatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgca 15311192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 51339142 - 51339035
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 119  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||     ||| |||| |||||||||| |||||||||||||||| |  |||||||||    
T  51339142 tcattttctttgtcgcaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaa-aaatcatcttttccaaagagaaattaaat 51339044  T
Q  120 gcaagttgc 128  Q
    |||| ||||    
T  51339043 gcaatttgc 51339035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 7397602 - 7397725
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta---tgttttttcaaacaaatcatc 98  Q
    ||||| |||||||||||| |  |||||||||||||| |||| |||||| ||||||| | |||||||||  ||||||    ||||||||||| |||| |||    
T  7397602 ctaaattataagtaaaaaaaattcattttctttgtcccaaattataagcaaaaaagcctaacttttatcatatttaattagttttttcaaa-aaattatc 7397700  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||||||| | ||||||||||||||    
T  7397701 ttttccaaaggaaaattaaatgcaa 7397725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 23873906 - 23873861
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  23873906 catctttccatgaaacttattccaaggagaacacaaaaaattatac 23873861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 26907170 - 26907125
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  26907170 catctttccatgaaacttattccaaggagaacacaaaaaattatac 26907125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 38942520 - 38942475
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  38942520 catctttccatgaaacttattccaaggagaacacaaaaaattatac 38942475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 40220137 - 40220182
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  40220137 catctttccatgaaacttattccaaggagaacacaaaaaattatac 40220182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 46949402 - 46949446
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  46949402 catctttccatgaaacttattccaaggagaacacaaaaaattata 46949446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 6786717 - 6786780
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  6786717 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 6786780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 15959921 - 15959850
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| || |||||| |||||||    
T  15959921 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaatttttatcttattta 15959850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 43667550 - 43667487
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||||||||||||||| ||||||||| |||||||||    
T  43667550 aatataagaaaaaaaaacacattttctttgtctcaaaatataagcaaaaaagacaaacttttat 43667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 51840740 - 51840633
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 119  Q
    ||||||||||||||  ||| |||||||||||||||| |||||||||     ||| |||| |||||||||| |||||||||||||||| |  |||||||||    
T  51840740 tcattttctttgtcgtaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaa-aaatcatcttttccaaagagaaattaaat 51840642  T
Q  120 gcaagttgc 128  Q
    |||| ||||    
T  51840641 gcaatttgc 51840633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 15285888 - 15285933
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatacttca 238  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  15285888 tttccatgaaacttatttcaaggagaacacaaaaaattatacttca 15285933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 18852304 - 18852349
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  18852304 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 18852349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 25990833 - 25990874
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  25990833 tttccatgaaacttattccaaggagaacacaaaaaattatac 25990874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 28916594 - 28916549
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  28916594 catctttccatgaaacttattccaagaagaacacaaaaaattatac 28916549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 31970388 - 31970343
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  31970388 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 31970343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 40935692 - 40935647
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  40935692 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 40935647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 41063635 - 41063760
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg----ttatttatgttttttcaaacaaatca 96  Q
    |||||| |||||| ||||| | |||||||| |||||| |||| |||||| |||||||||||||||||||     ||| |||| || ||||||| |||| |    
T  41063635 cctaaattataagcaaaaaaaactcattttatttgtcccaaattataagaaaaaaagaccaacttttatcatttttaattatattgtttcaaa-aaatta 41063733  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    |||||| ||| | ||||||||||||||    
T  41063734 tctttttcaaagaaaaattaaatgcaa 41063760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 43656116 - 43656071
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  43656116 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 43656071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 40960553 - 40960513
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaat 229  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  40960553 catctttccatgaaacttattccaaggagaacacaaaaaat 40960513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 6787272 - 6787209
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | |||||||||||| || ||||||||||| ||||||||| |||||||||    
T  6787272 aatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttat 6787209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 12449217 - 12449154
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  12449217 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 12449154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 15311260 - 15311303
Alignment:
Q  191 tctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  15311260 tctttccatgaaacttattccaaggagaatacaaaaaattatac 15311303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 32624256 - 32624193
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  32624256 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 32624193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 7468217 - 7468171
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  7468217 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 7468171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 23392448 - 23392386
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactt 65  Q
    |||||| |||||||||| | |||||||||||| ||  ||||| ||||||||||||||||||||    
T  23392448 taaaatgtaagtaaaaaaaactcattttctttatccaaaaatgtaagtaaaaaagaccaactt 23392386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 28017008 - 28016962
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  28017008 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 28016962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 18036625 - 18036670
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||    
T  18036625 catcttttcatgaaacttattccaagaagaacacaaaaaattatac 18036670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 18913424 - 18913379
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  18913424 catcttttcatgaaacttattccgaggagaacacaaaaaattatac 18913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 39026325 - 39026280
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||    
T  39026325 catctttccatgaaacttatttcaagaagaacacaaaaaattatac 39026280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 44875260 - 44875305
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||    
T  44875260 catctttccatgaaacttattctaaggagaacacaaaaatttatac 44875305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 49924500 - 49924545
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||    
T  49924500 catctttccatgaaacttatttcaagaagaacacaaaaaattatac 49924545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 2125967 - 2126011
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||  |||||||||||||||||||| |||||||||    
T  2125967 cattttctttgtcctaaaatataagtaaaaaagacaaacttttat 2126011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 29488838 - 29488874
Alignment:
Q  198 atgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||||||||||||||||||| |||||||||    
T  29488838 atgaaacttattccaaggagaacacaacaaattatac 29488874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 39555817 - 39555773
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  39555817 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 39555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47600326 - 47600258
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||| |||||||| ||||| | |||||||||||||||  ||| |||||||||||||||| || ||||||    
T  47600326 cctataatataagcaaaaaaaactcattttctttgtccgaaagtataagtaaaaaagacaaatttttat 47600258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 1820296 - 1820358
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | |||||||||||| ||  |||||||||||||||||||| |||||||||    
T  1820296 aatataagaaaaaaaa-ctcattttctttatcctaaaatataagtaaaaaagacaaacttttat 1820358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 13291874 - 13291909
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaa 224  Q
    |||||||||||||||||||||||||||| |||||||    
T  13291874 catctttctatgaaacttattccaaggataacacaa 13291909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 16661431 - 16661534
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    |||||||||||| || |||| |||||| |||||||||||||| ||||     ||| ||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  16661431 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 16661529  T
Q  119 tgcaa 123  Q
    |||||    
T  16661530 tgcaa 16661534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 24728907 - 24728860
Alignment:
Q  7 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaa 54  Q
    ||||||| ||||| | ||||||||||||||||||||||||||| ||||    
T  24728907 atataagcaaaaaaaactcattttctttgtctcaaaatataagaaaaa 24728860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 46803747 - 46803708
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaa 228  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  46803747 catctttctatgaaacttattgcaaggataacacaaaaaa 46803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 298931 - 298885
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||||||||||| |||| ||||||||| || ||||||    
T  298931 ctcattttctttgtctcaaaatgtaagcaaaaaagacaaagttttat 298885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 6785353 - 6785399
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  6785353 ctcattttctttgtcacaaaatataagcaaaaaagataaacttttat 6785399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 6848385 - 6848343
Alignment:
Q  192 ctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||    
T  6848385 ctttccatgaaacttatttcaaggagaacacaaaaaatcatac 6848343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 16854015 - 16854065
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 56  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||    
T  16854015 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaa 16854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 33369434 - 33369496
Alignment:
Q  7 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| | |||||||||||||||  | |||||||| ||||||||| | |||||||    
T  33369434 atataagtaaaaaaaactcattttctttgtcctagaatataagcaaaaaagacaagcttttat 33369496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 33431440 - 33431493
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagac 59  Q
    ||||||||| ||||| || |||||||||||||  |||||||||||||||||||||    
T  33431440 aaatataagaaaaaaaat-tcattttctttgttccaaaatataagtaaaaaagac 33431493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 46542861 - 46542911
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 56  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||    
T  46542861 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaa 46542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 47026375 - 47026437
Alignment:
Q  7 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||| ||||| |  |||||||||||||   |||||||||||||||||||| |||||||||    
T  47026375 atataagcaaaaaaaattcattttctttgttctaaaatataagtaaaaaagacaaacttttat 47026437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 3076175 - 3076278
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta--tgttttttcaaacaaatcatctttt 102  Q
    ||||||||| ||||| || |||||||||||||||||||||||||   ||||| || |||||||||  ||||||  | | |||| ||| ||||||| ||||    
T  3076175 aaatataagcaaaaaaat-tcattttctttgtctcaaaatataatccaaaaaaacaaacttttattctatttaattttgtttttaaaaaaatcatatttt 3076273  T
Q  103 ccaat 107  Q
    |||||    
T  3076274 ccaat 3076278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 35941922 - 35941967
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||| |||||||| |||||||||||||||    
T  35941922 catctttccataaaacttatttcaaggagagcacaaaaaattatac 35941967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 4672779 - 4672831
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaaga 58  Q
    |||| ||| ||||| | ||||||||||||||| ||||||||||| ||||||||    
T  4672779 aatacaagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaaga 4672831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 13136833 - 13136781
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaa 55  Q
    ||||||||||| ||| | ||||| ||||||||||| ||||||||||| |||||    
T  13136833 taaaatataagcaaataaatctctttttctttgtcgcaaaatataagcaaaaa 13136781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 42966044 - 42966000
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||| |||||| ||||||| ||||||||||||| |||||||||    
T  42966044 cattttatttgtcccaaaatacaagtaaaaaagacaaacttttat 42966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 50665136 - 50665180
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataag 49  Q
    ||||||||| ||||| | ||||||||||||||| |||||||||||    
T  50665136 aaatataagcaaaaaaaactcattttctttgtcccaaaatataag 50665180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 8146279 - 8146150
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8146279 cctaaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc 8146180  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  8146179 ttttccaatgtaaaattaaatgcaaattgc 8146150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 35462984 - 35462860
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||| ||||    
T  35462984 cctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaaacatc 35462885  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    |||| ||||||||||||||||||||    
T  35462884 tttttcaatgtaaaattaaatgcaa 35462860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 30086812 - 30086685
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  30086812 taaaatataagcaaaaaaatctcgtattctttgtctcaaaatataagtaaaaaagaccaacttttatgtcattattatgttttttcaaacaaatcatctt 30086713  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||| ||| ||||    
T  30086712 ttccaatgtaaaattaaatacaaattgc 30086685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 8541829 - 8541701
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8541829 cctaaaatataagcaaaaatatctcatttt-tttgtcttaaaatataacaaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc 8541731  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  8541730 ttttccaatgtaaaattaaatgcaaattgc 8541701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 16286349 - 16286220
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg--ttatttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||   | ||||||||||||||||||||| |||    
T  16286349 cctaaaatataagcaaacaaatctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgcaatttttatgttttttcaaacaaattatc 16286250  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||||||||    
T  16286249 tttttcaatgtaaaattaaatgcaagttgc 16286220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31690886 - 31690757
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||  |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  31690886 cctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 31690787  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  31690786 ttttccaatgtaaaattaaatgcaaattgc 31690757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 20914754 - 20914881
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| |  ||||||||||||||| |||||||||| |||||| ||||||||||||| |||||  ||||||||||||||||||||||||    
T  20914754 taaaatataagcaaaaaaaattcattttctttgtcttaaaatataagcaaaaaataccaacttttatgctatttttatgttttttcaaacaaatcatctt 20914853  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||    
T  20914854 ttccaatgtaaaattaaatgcaagttgc 20914881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42364932 - 42365057
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||||| ||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    |||||||||||||||||||||    
T  42364932 cctaaaatataagcaaaagaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--gtttttttcaaacaaatcatctt 42365029  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||| ||||    
T  42365030 ttccaatgtaaaattaaatgcaaattgc 42365057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13146622 - 13146743
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||||||  |||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  13146622 cctaaaatataagcaaaaaaatctcatattctttgtatcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 13146721  T
Q  99 ttttccaatgtaaaattaaatg 120  Q
    ||||||||||||||||||||||    
T  13146722 ttttccaatgtaaaattaaatg 13146743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 25962716 - 25962592
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||| |||||| || |||||||||| |||||  ||||||||||||||||||||||||    
T  25962716 taaaatataagcaaaaatatatcattttctttgtctcaaaatataagcaaaaaatacaaacttttatgctatttttatgttttttcaaacaaatcatctt 25962617  T
Q  101 ttccaatgtaaaattaaatgcaagt 125  Q
    || ||||||||||||||||||||||    
T  25962616 tttcaatgtaaaattaaatgcaagt 25962592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 31317028 - 31316938
Alignment:
Q  40 aaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||| |||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31317028 aaaatataagcaaaaaagatcaacttttatgttatttttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaagttgc 31316938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 12638783 - 12638911
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| ||||||| || ||| |||||||||||||| ||||||||| |||||||||| ||||  ||||||||||||||||||| ||     
T  12638783 cctaaaatataagcaaaaaaatctcatattatttatctcaaaatataag-aaaaaagactaacttttatgctattattatgttttttcaaacaaattatt 12638881  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||| |||||||||||||||||||| ||||    
T  12638882 tttttcaatgtaaaattaaatgcaaattgc 12638911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 37066489 - 37066360
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || |||| |||||||||| |||||||||| ||||||||| || |||| || ||||  ||| ||||||||||||||| |||    
T  37066489 cctaaaatataagcaaaaaaatttcatattctttgtcttaaaatataagcaaaaaagactaatttttttgctattattatattttttcaaacaaataatc 37066390  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  37066389 ttttccaatgtaaaattaaatgcaaattgc 37066360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 24432637 - 24432537
Alignment:
Q  30 tctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttg 127  Q
    |||||||||||||||||||| |||||| ||||||||||||  |||||  || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  24432637 tctttgtctcaaaatataagcaaaaaaaaccaacttttatactatttttatattttttcaaataaatcatcttttccaatgtaaaattaaatgcaagttg 24432538  T
Q  128 c 128  Q
    |    
T  24432537 c 24432537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 24439465 - 24439594
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaa-acaaatcat 97  Q
    |||||| |||||| ||||| || |||||||||||||| ||||||||||| |||||||| |||||||||||||||  |||||||||||||| | |||||||    
T  24439465 cctaaattataagcaaaaaaatttcattttctttgtcgcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaacaaaaatcat 24439564  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    | ||||||| |||||||||||||||| ||||    
T  24439565 c-tttccaaagtaaaattaaatgcaaattgc 24439594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 8143828 - 8143947
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    |||||| |||||| ||||| ||| |||||| |||||| || |||||||| |||||||| ||||||||||| |||  ||||||||||||||| ||||| ||    
T  8143828 cctaaattataagaaaaaa-atcacattttttttgtcccataatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcttc 8143926  T
Q  99 ttttccaatgtaaaattaaat 119  Q
    |||| ||| ||||||||||||    
T  8143927 tttttcaaagtaaaattaaat 8143947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20452689 - 20452567
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaa-aaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 97  Q
    |||||||||||| |||||| ||||||| || ||||| ||||||||||||||| |||||| ||| ||||||| | |  |||| |||||||||| || ||||    
T  20452689 cctaaaatataaataaaaaaatctcatattgtttgtttcaaaatataagtaaaaaaagatcaatttttatgctgttattatattttttcaaataattcat 20452590  T
Q  98 cttttccaatgtaaaattaaatg 120  Q
    || || || ||||||||||||||    
T  20452589 ctctttcattgtaaaattaaatg 20452567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 24432476 - 24432431
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  24432476 catctttccatgaaacttattccaaggagaacacaaaaaattatac 24432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 25962524 - 25962479
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  25962524 catctttccatgaaacttattccaaggagaacacaaaaaattatac 25962479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 31316877 - 31316832
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  31316877 catctttccatgaaacttattccaaggagaacacaaaaaattatac 31316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 42273529 - 42273632
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta---tgttttttcaaacaaatcatctttt 102  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||  ||||||   |  ||||| ||| ||||||||||||    
T  42273529 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttaaaaaaaatcatctttt 42273628  T
Q  103 ccaa 106  Q
    ||||    
T  42273629 ccaa 42273632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20914942 - 20914986
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  20914942 catctttccatgaaacttattccaaggagaacacaaaaaattata 20914986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 39505514 - 39505442
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    ||||||||| ||||| |  |||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  39505514 aaatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttattttattta 39505442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 11262134 - 11262071
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  11262134 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaacttttat 11262071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 12730268 - 12730205
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| || || | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  12730268 aatataagcaagaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 12730205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 20643894 - 20643965
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    |||||||| ||||| | |||||||||||| || ||||||||||| ||||||||| ||||||||| |||||||    
T  20643894 aatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttatcttattta 20643965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 9957680 - 9957626
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 77  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  9957680 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 9957626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 8146089 - 8146044
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  8146089 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 8146044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 17825425 - 17825340
Alignment:
Q  39 caaaatataagt-aaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 123  Q
    |||||||||||  ||||||||| || ||||||| || |  | |||||||||||||||||| |||| ||||||||||||||||||||    
T  17825425 caaaatataaggcaaaaaagacaaatttttatgctaatattattttttcaaacaaatcatatttttcaatgtaaaattaaatgcaa 17825340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 25840742 - 25840847
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 100  Q
    ||||||||| ||||| | | ||||||||||||| ||||||||||| ||||| ||| |||||||||  ||||||    |||||||| ||| ||||||||||    
T  25840742 aaatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaatgacaaacttttattctatttaatcttgtttttt-aaaaaaatcatctt 25840840  T
Q  101 ttccaat 107  Q
    |||||||    
T  25840841 ttccaat 25840847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 2002381 - 2002270
Alignment:
Q  9 ataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaag-accaacttttatgttatttatgttttttcaaacaaatcatcttttccaat 107  Q
    ||||| ||||| |||||| |||||||||| ||||||||||| ||||||  || ||||||||||||||||         |||| ||||||||||||||||     
T  2002381 ataagcaaaaaaatctcactttctttgtcccaaaatataagcaaaaaaatacaaacttttatgttattt---------caaaaaaatcatcttttccaaa 2002291  T
Q  108 gtaaaattaaatgcaagttgc 128  Q
     ||||||||||||||| ||||    
T  2002290 ataaaattaaatgcaaattgc 2002270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 8225343 - 8225406
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| |  |||||||||||||| ||||||||||| ||||||||| |||||||||    
T  8225343 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 8225406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 8506353 - 8506456
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    |||||||||||| || |||| ||||||||||||||| |||||||| |     ||| ||||||| ||||||| |||| ||||||||||| | |||||||||    
T  8506353 ctcattttctttctcccaaattataagtaaaaaagatcaacttttgtcatatttaattatgttgtttcaaa-aaattatcttttccaaagaaaaattaaa 8506451  T
Q  119 tgcaa 123  Q
    |||||    
T  8506452 tgcaa 8506456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 34425212 - 34425273
Alignment:
Q  7 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||| ||||||| |||||||||||||||  |||||||||| ||||||||| |||||||||    
T  34425212 atataagcaaaaaca-ctcattttctttgtcctaaaatataagcaaaaaagacaaacttttat 34425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 8959559 - 8959656
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 120  Q
    ||||||||| ||  ||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||||    
T  8959559 attttctttatcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaatg 8959656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 12638972 - 12639017
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||    
T  12638972 catctttccataaaatttattccaaggagaacacaaaaaattatac 12639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 13146812 - 13146857
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||    
T  13146812 catctttccataaaacttattccaaagagaacacaaaaaattatac 13146857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 16286159 - 16286114
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||    
T  16286159 catcttttcatgaaacttattccaaagagaacacaaaaaattatac 16286114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 31690696 - 31690651
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||    
T  31690696 catctttctataaaactcattccaagaagaacacaaaaaattatac 31690651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 32433552 - 32433616
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||| || ||||||    
T  32433552 aaaatataagcaaaaaaa-ctcatattctttgtctcaaaatataagcaaaaaagacaaatttttat 32433616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 24439655 - 24439699
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||    
T  24439655 catctttccatgaaacttattccaagaataacacaaaaaattata 24439699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 38280748 - 38280788
Alignment:
Q  29 ttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  38280748 ttctttgtctcaaaatataaataaaaaagacaaacttttat 38280788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 28906984 - 28907087
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    |||||||||||| || |||| |||||| |||||||||||||| ||||     ||| ||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  28906984 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28907082  T
Q  119 tgcaa 123  Q
    |||||    
T  28907083 tgcaa 28907087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 28943379 - 28943482
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    |||||||||||| || |||| |||||| |||||||||||||| ||||     ||| ||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  28943379 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28943477  T
Q  119 tgcaa 123  Q
    |||||    
T  28943478 tgcaa 28943482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 37522840 - 37522777
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  37522840 aatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttat 37522777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 37563012 - 37562949
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  37563012 aatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttat 37562949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 104480 - 104438
Alignment:
Q  27 ttttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||| |||| ||||||||||||||||||||| |||||||||    
T  104480 ttttctctgtcccaaaatataagtaaaaaagacaaacttttat 104438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 38130379 - 38130345
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaaga 58  Q
    |||||||||||||| ||||||||||||||||||||    
T  38130379 tcattttctttgtcccaaaatataagtaaaaaaga 38130345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 8541640 - 8541595
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| | ||||||||||||||| |||| ||||||||||||||    
T  8541640 catctttccaagaaacttattccaagaagaatacaaaaaattatac 8541595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 35462794 - 35462750
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||    
T  35462794 catctttccatgaaacttat-ccaaggagaaaacaaaaaattatac 35462750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 37066299 - 37066254
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| | ||||||||||||||| |||| ||||||||||||||    
T  37066299 catctttccacgaaacttattccaagaagaatacaaaaaattatac 37066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 42365118 - 42365159
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaatt 230  Q
    |||||||| ||||||||||||||||  |||||||||||||||    
T  42365118 catctttccatgaaacttattccaataagaacacaaaaaatt 42365159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 842797 - 842753
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||||  |||||||||    
T  842797 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 842753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 4463223 - 4463267
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataag 49  Q
    ||||||||| ||||| | ||||||||||||||| |||||||||||    
T  4463223 aaatataagcaaaaagaactcattttctttgtcccaaaatataag 4463267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 11857938 - 11857990
Alignment:
Q  4 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 56  Q
    ||||| ||||||||||   |||||||||||||||||||||| |||| ||||||    
T  11857938 aaaatgtaagtaaaaaatactcattttctttgtctcaaaatgtaagcaaaaaa 11857990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 30086622 - 30086578
Alignment:
Q  191 tctttctatgaaacttattccaaggagaacac-aaaaaattatac 234  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||    
T  30086622 tctttccatgaaacttatttcaaggagaacacgaaaaaattatac 30086578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41625797 - 41625689
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatca 96  Q
    |||||||| |||||||||| | |||||||||||| ||||||||| |||  ||||||||  || ||||||  ||||||    |||||||  ||| ||||||    
T  41625797 cctaaaatgtaagtaaaaata-ctcattttctttatctcaaaatgtaatcaaaaaagataaatttttattctatttattcttgtttttaaaaaaaaatca 41625699  T
Q  97 tcttttccaa 106  Q
    ||||||||||    
T  41625698 tcttttccaa 41625689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 30949026 - 30949155
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatc 98  Q
    ||||||||||||| | ||| |||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||  ||||||||||||||||||||||    
T  30949026 cctaaaatataagcacaaaaatcttattttctttgtctcaaaatataagcaaaaaagactaacttttatgctatttttatgttttttcaaacaaatcatc 30949125  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||||||||    
T  30949126 ttttccaatgtaaaattaaatgcaagttgc 30949155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31887388 - 31887258
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgtttttt-caaacaaatcat 97  Q
    ||||||||||||| ||||| || ||||||||||||||||||| |||||| | |||||||||||||||||| |||||  ||||||||| ||||||||||||    
T  31887388 cctaaaatataagcaaaaaaatatcattttctttgtctcaaattataagcataaaagaccaacttttatgctatttttatgtttttttcaaacaaatcat 31887289  T
Q  98 cttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||||||||||||||||||||||||||||    
T  31887288 cttttccaatgtaaaattaaatgcaagttgc 31887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10227803 - 10227932
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||| |||||||||||||    
T  10227803 cctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatc 10227902  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||| ||||||||||||||| ||||    
T  10227903 ttttccaatataaaattaaatgcaaattgc 10227932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 12278597 - 12278726
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || |||| ||||||||||||||||||||| |||||||| |||||||||||||||  |||||||||||||||||||||||     
T  12278597 cctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaaacaaatcatt 12278696  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||| ||||||||||||||||||| ||||    
T  12278697 ttttcaaatgtaaaattaaatgcaaattgc 12278726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 17722075 - 17721946
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    |||||||||||| |||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||| |||||||     
T  17722075 cctaaaatataactaaaaaaatcccatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaagaaatcata 17721976  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  17721975 ttttccaatgtaaaattaaatgcaaattgc 17721946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 33756148 - 33756276
Alignment:
Q  2 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatct 99  Q
    |||||||||||| ||||| ||||||| |||||| |||||||||||||| |||||| ||||||||||||| |||  ||||||||||||||||||||||| |    
T  33756148 ctaaaatataagcaaaaaaatctcatattctttatctcaaaatataagaaaaaaataccaacttttatgctattattatgttttttcaaacaaatcattt 33756247  T
Q  100 tttccaatgtaaaattaaatgcaagttgc 128  Q
    ||| |||||||||||||||||||| ||||    
T  33756248 ttttcaatgtaaaattaaatgcaaattgc 33756276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 373990 - 374119
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| ||||| || |||  |||||| |||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||     
T  373990 cctaaaatataagcaaaaaaatttcaaattctttatctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcata 374089  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    |||||| |||||||||||||||||| ||||    
T  374090 ttttccgatgtaaaattaaatgcaaattgc 374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 17598184 - 17598313
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatc 98  Q
    ||||||||||||  |||||  | ||||||| |||||| ||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| ||    
T  17598184 cctaaaatataaacaaaaaagtttcattttttttgtcccaaaatataagcaaaaaagaccaacttgtatgttattattatgttttttcaaacaaatcttc 17598283  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
    ||||||||||||||||||||||||| ||||    
T  17598284 ttttccaatgtaaaattaaatgcaaattgc 17598313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 30766339 - 30766466
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||||||||| |||| || ||    
T  30766339 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgttattattatgttttttcaaagaaattatttt 30766438  T
Q  101 ttccaatgtaaaattaaatgcaagttgc 128  Q
    || |||||||||||||||||||| ||||    
T  30766439 tttcaatgtaaaattaaatgcaaattgc 30766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 32882941 - 32882835
Alignment:
Q  8 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaat 107  Q
    |||||| ||||| || ||||||||||||||  |||||||||| ||||||||||||||||| |||||         ||||||| || |||||||||||||     
T  32882941 tataagcaaaaaaatttcattttctttgtcctaaaatataagcaaaaaagaccaacttttgtgtta---------tttcaaaaaagtcatcttttccaaa 32882851  T
Q  108 gtaaaattaaatgcaa 123  Q
    ||||||||||||||||    
T  32882850 gtaaaattaaatgcaa 32882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 30766527 - 30766571
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  30766527 catctttccatgaaacttattccaaggagaacacaaaaaattata 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 4031881 - 4032004
Alignment:
Q  3 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatc 98  Q
    |||| |||||||||||| | |||||||||||| ||||||| |||||| | |||||||||||||| ||     ||| |||||||||||| || |||| |||    
T  4031881 taaattataagtaaaaaaaactcattttctttatctcaaattataagcataaaagaccaactttaatcatatttaattatgttttttcgaa-aaattatc 4031979  T
Q  99 ttttccaatgtaaaattaaatgcaa 123  Q
    ||||| || | ||||||||||||||    
T  4031980 ttttcaaagggaaaattaaatgcaa 4032004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 374180 - 374225
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  374180 catctttccatgaaacttattctaaggagaacacaaaaaattatac 374225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4987835 - 4987960
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt----tatgttttttcaaacaaatca 96  Q
    |||||| |||||||||||| | |  |||||||||||| |||| ||||| |||||||||| |||||||||  ||||    |||||||||| ||| |||| |    
T  4987835 cctaaattataagtaaaaaaaacctattttctttgtcccaaattataaataaaaaagactaacttttatcatattcaaatatgtttttttaaa-aaatta 4987933  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    |||||| ||| | ||||||||||||||    
T  4987934 tctttttcaaaggaaaattaaatgcaa 4987960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 7275159 - 7275053
Alignment:
Q  5 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 100  Q
    ||||||||| ||||| | |||||||| ||||||| |||||||||| |||||| || |||||||||  ||||||    |||||||  ||| ||||||||||    
T  7275159 aaatataagcaaaaaaaactcattttatttgtcttaaaatataagcaaaaaatacaaacttttattatatttaatcttgtttttaaaaaaaaatcatctt 7275060  T
Q  101 ttccaat 107  Q
    |||||||    
T  7275059 ttccaat 7275053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 17721881 - 17721840
Alignment:
Q  193 tttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  17721881 tttccatgaaacttattccaaggagaacacaaaaaattatac 17721840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 30949216 - 30949261
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  30949216 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 30949261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 3095971 - 3095908
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  3095971 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 3095908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 21542329 - 21542392
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  21542329 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 21542392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 34177891 - 34177828
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||| | | ||||||||||||  |||||||||||||||||| || |||||||||    
T  34177891 aatataagtaaaaaaaacacattttctttgtaccaaaatataagtaaaaaacacaaacttttat 34177828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 5822110 - 5822064
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatact 235  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||    
T  5822110 catctttctatgaaacttattccaaagataacacaagaaattatact 5822064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 12278790 - 12278832
Alignment:
Q  192 ctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  12278790 ctttccatgaaacttattctaaggagaacacaaaaaattatac 12278832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 16013635 - 16013589
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  16013635 ctcattttctttgtctcaaattatgagtaaaatagaccaacttttat 16013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 3888320 - 3888444
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatca 96  Q
    |||||| |||||| ||||| | |||||||||||| |   ||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| |    
T  3888320 cctaaattataagaaaaaaaa-ctcattttctttattctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaatta 3888417  T
Q  97 tcttttccaatgtaaaattaaatgcaa 123  Q
    |||||| ||| | ||||||||||||||    
T  3888418 tctttttcaaaggaaaattaaatgcaa 3888444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 10227993 - 10228038
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||    
T  10227993 catctttcgatgaaacttatttcaaggagaacactaaaaattatac 10228038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 5822266 - 5822162
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatcttttccaatgtaaaattaaa 118  Q
    |||||||||| |||| |||| |||||  ||||||||| || ||||||  ||||||    |||||||| ||| |||||||||||||||| |  ||||||||    
T  5822266 ctcattttctctgtcccaaattataaacaaaaaagactaatttttatcatatttaattatgtttttttaaaaaaatcatcttttccaaagagaaattaaa 5822167  T
Q  119 tgcaa 123  Q
    |||||    
T  5822166 tgcaa 5822162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 35129305 - 35129242
Alignment:
Q  6 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||| ||||| | | ||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  35129305 aatataagcaaaaaaaacacattttctttgtcccaaaatacaagcaaaaaagacaaacttttat 35129242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 1130433 - 1130479
Alignment:
Q  23 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||||| |||| |||||| |||||| ||||||||||||    
T  1130433 ctcattttctttgtcccaaattataagcaaaaaaaaccaacttttat 1130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 5121532 - 5121487
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| ||||||||||||  ||||||||||||||||| |||||    
T  5121532 catctttccatgaaacttattttaaggagaacacaaaaaactatac 5121487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 17598374 - 17598419
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| || ||| ||||||||| ||||||||||||||||||||    
T  17598374 catctttccataaaatttattccaaagagaacacaaaaaattatac 17598419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21964038 - 21964082
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattata 233  Q
    |||||||| || |||||||||  ||||||||||||||||||||||    
T  21964038 catctttccataaaacttattttaaggagaacacaaaaaattata 21964082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4522 - 4650
Alignment:
Q  1 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatc 98  Q
    ||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||| |||||||||||||    
T  4522 cctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatc 4621  T
Q  99 ttttccaatgtaaaattaaatgcaagttgc 128  Q
     |||||||| ||||||||||||||| ||||    
T  4622 -tttccaatataaaattaaatgcaaattgc 4650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 4711 - 4756
Alignment:
Q  189 catctttctatgaaacttattccaaggagaacacaaaaaattatac 234  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||    
T  4711 catctttcgatgaaacttatttcaaggagaacactaaaaattatac 4756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 154792 - 154835
Alignment:
Q  26 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  154792 attttctttgtctcaaaatataagtaaaaaagataaacttttat 154835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 910 - 955
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||    
T  910 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 8870 - 8915
Alignment:
Q  24 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||    
T  8870 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 8915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 157672 - 157737
Alignment:
Q  5 aaatataagtaaaaacat-ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||| ||||| || || |||||||||||| ||||||||||| ||||||||| |||||||||    
T  157672 aaatataagcaaaaaaatacttattttctttgtcccaaaatataagcaaaaaagacaaacttttat 157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 77887 - 77931
Alignment:
Q  25 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  77887 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 77931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 9979 - 10019
Alignment:
Q  29 ttctttgtctcaaaatataagtaaaaaagaccaacttttat 69  Q
    ||||||||| ||||||||||||||||||| | |||||||||    
T  9979 ttctttgtcccaaaatataagtaaaaaaggcaaacttttat 10019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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