View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15081_high_45 (Length: 247)
Name: NF15081_high_45
Description: NF15081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15081_high_45 |
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Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 54 - 208
Target Start/End: Complemental strand, 34258480 - 34258326
Alignment:
| Q |
54 |
tttcatcaactcggattagcaaagcttttatctctattagagtacacacaatcattggtatttgctagtaccaattctctgattcatccatatactgtat |
153 |
Q |
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| T |
34258480 |
tttcatcaactcggattagcaaagcttttatctctattagagtacacacaatcattgctatttgctagtaccaattctctgattcatccatatactgtat |
34258381 |
T |
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| Q |
154 |
aacaagggtttatttgggcaatcaaattgatcctcatcttcagtaaacaccactt |
208 |
Q |
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| T |
34258380 |
aacaagggtttatttgggcaatcaaattgatcctcatcttcagttaacaccactt |
34258326 |
T |
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