View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15081_high_49 (Length: 240)
Name: NF15081_high_49
Description: NF15081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15081_high_49 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 53799301 - 53799523
Alignment:
| Q |
1 |
tctgatcttacatgagtatgacataagctaagtgcatatgaaccctactggttgacttgccctaattatttcaaaaaacgaattcaaagaccttgaatat |
100 |
Q |
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|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53799301 |
tctgatcttacatgagcatgacataagctaagtgcatattaaccctactggttgacttgccctaattatttcaaaaaacgaattcaaagaccttgaatat |
53799400 |
T |
|
| Q |
101 |
ctatcctcctttttccgtgttgaaaatattgtgatgacttaactatatagtgcaccacaatgaattaattcaatccaaaccacatattaatcttcaagtc |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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|
| T |
53799401 |
ctatcctcctttttccgtgttgaaaatattttgatgacttaactatatagtgcaccacaatgaatcaattcaatccaaaccacatattaatcttcaagtc |
53799500 |
T |
|
| Q |
201 |
gaatgaattgtgatccttatagt |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
53799501 |
gaatgaattgtgatccttatagt |
53799523 |
T |
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