View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15081_high_55 (Length: 204)
Name: NF15081_high_55
Description: NF15081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15081_high_55 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 26441482 - 26441660
Alignment:
| Q |
17 |
agttaccatttttgtaaaa-tatattcattttaggaattgtttgttattattgcaacaactactaagaaacaattattgtttccattatgagaagttctt |
115 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26441482 |
agttaccatttttgtaaaaatatattcattttaggaattgtttgttattattgcaacaactactaagaaacaattattgtttccattatgagaagttctt |
26441581 |
T |
|
| Q |
116 |
gatctaaaattatggttgcataactcgttcatagatacacattaaatatagtaaatcaatactagggcttcttctcact |
194 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
26441582 |
gatctaaacttatggttgcataactcgttcatagatacacattaaatatagtaaagcaatactagggtttcttatcact |
26441660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University