View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15081_low_16 (Length: 457)
Name: NF15081_low_16
Description: NF15081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15081_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 13 - 439
Target Start/End: Complemental strand, 41623937 - 41623511
Alignment:
| Q |
13 |
aaaatacataagtaattaatacatgatgtatatgtaaatctttgtagaagaaacaaaccaaacaaccagaactaacaaagaaaaattatacaactacttc |
112 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41623937 |
aaaatacataagtaattattacatgatgtatatgtaaatctttgtagaagaaacaaaccaaacaaccagaactaacaaagaaaaattatacaactacttc |
41623838 |
T |
|
| Q |
113 |
aaagtttctcctcttggcttgatttttgctcttaaagactccttcatcacaacagtaaactccatctttccagagaaatctatcttcttccctggtggat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41623837 |
aaagtttctcctcttggcttgatttttgctcttaaagactccttcatcacaacagtaaactccatctttccagagaaatctatcttcttccctggtggat |
41623738 |
T |
|
| Q |
213 |
aagcactccattcaaactcttgaaccatcctagccaacatcaaatgaatatgcacagtaccaatagccaaaccaggacaaatccttctcccaacaccaaa |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41623737 |
aagcactccattcaaactcttgaaccatcctagccaacatcaaatgaatatgcacagtaccaatagccaaaccaggacaaatccttctcccaacaccaaa |
41623638 |
T |
|
| Q |
313 |
tggcatcatttttactcctgtaacaccagttatatcagcttcctcatccttagaaagaaacctttcaggatcaaacttttcagggttggaccataattta |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41623637 |
tggcatcatttttactcctgtaacaccagttatatcagcttcctcacccttagaaagaaacctttcaggatcaaacttttcagggttggaccataattta |
41623538 |
T |
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| Q |
413 |
gggtcctcacctatgccagctgtatat |
439 |
Q |
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||||||||||||||||||||||||||| |
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| T |
41623537 |
gggtcctcacctatgccagctgtatat |
41623511 |
T |
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