View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15084_high_20 (Length: 332)
Name: NF15084_high_20
Description: NF15084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15084_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-175
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 8229887 - 8230204
Alignment:
| Q |
1 |
tcatctcctagatcaattccacaagttgtcttctttctccttagctgctcatagaaaaaacataaattagtacatgtacttaagcatttatatatgttta |
100 |
Q |
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|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8229887 |
tcatttcctagatcaattccacaagttgacttctttctccttagctgctcatagaaaaaacataaattagtacatgtacttaagcatttatatatgttta |
8229986 |
T |
|
| Q |
101 |
tgttgtttaccaaactttgctgaaaaaatgttagaaatcttaattacctctgcaactatcactccattcttgtccattattttgcaagctggcttgcaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8229987 |
tgttgtttaccaaactttgctgaaaaaatgttagaaatcttaattacctctgcaactatcactccattcttgtccattattttgcaagctggcttgcaag |
8230086 |
T |
|
| Q |
201 |
tgctgctttctattttataattatatggttggtttttatccaatccaagttcaacttcataacttgaatcccatttagagatgctatatgttttaccaac |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8230087 |
tgctgctttctattttataattatatggttggtttttatccaatccaagttcaacttcataacttgaatcccatttagagatgctatatgttttaccaac |
8230186 |
T |
|
| Q |
301 |
tcgaaagcatggtccttt |
318 |
Q |
| |
|
|||||||||||||||||| |
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| T |
8230187 |
tcgaaagcatggtccttt |
8230204 |
T |
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