View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15084_low_11 (Length: 539)

Name: NF15084_low_11
Description: NF15084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15084_low_11
NF15084_low_11
[»] chr3 (50 HSPs)
chr3 (179-428)||(27676540-27676787)
chr3 (219-434)||(42696991-42697204)
chr3 (232-432)||(25870096-25870294)
chr3 (252-431)||(10872490-10872668)
chr3 (245-432)||(13286113-13286299)
chr3 (229-395)||(6136379-6136543)
chr3 (219-432)||(15515032-15515241)
chr3 (237-432)||(28135923-28136117)
chr3 (247-432)||(3449084-3449266)
chr3 (249-431)||(17064481-17064661)
chr3 (179-430)||(17796672-17796918)
chr3 (179-430)||(19105112-19105358)
chr3 (219-428)||(22137421-22137628)
chr3 (219-432)||(28745920-28746131)
chr3 (270-432)||(9152760-9152919)
chr3 (331-432)||(41671434-41671534)
chr3 (219-428)||(39428046-39428258)
chr3 (219-432)||(8592173-8592397)
chr3 (181-311)||(6861033-6861165)
chr3 (240-373)||(20756187-20756319)
chr3 (232-424)||(21963587-21963778)
chr3 (232-424)||(21986023-21986214)
chr3 (224-431)||(8155904-8156110)
chr3 (219-431)||(24619972-24620185)
chr3 (219-308)||(19348684-19348772)
chr3 (184-296)||(22970903-22971016)
chr3 (185-308)||(18014089-18014210)
chr3 (224-296)||(9169809-9169880)
chr3 (236-300)||(15806288-15806352)
chr3 (179-253)||(10872816-10872890)
chr3 (336-434)||(27090702-27090799)
chr3 (238-308)||(8560367-8560435)
chr3 (232-282)||(10591789-10591839)
chr3 (274-432)||(29067475-29067631)
chr3 (183-232)||(15806407-15806456)
chr3 (336-424)||(3041483-3041570)
chr3 (336-432)||(8560231-8560326)
chr3 (344-432)||(15806222-15806309)
chr3 (340-427)||(13006089-13006174)
chr3 (179-226)||(24649586-24649633)
chr3 (225-308)||(21553802-21553888)
chr3 (238-311)||(23649389-23649462)
chr3 (336-432)||(20766675-20766770)
chr3 (224-272)||(27055258-27055306)
chr3 (336-431)||(18014251-18014345)
chr3 (336-434)||(22971069-22971165)
chr3 (225-258)||(22494734-22494767)
chr3 (379-431)||(6860986-6861037)
chr3 (277-317)||(8156121-8156161)
chr3 (277-317)||(20756137-20756177)
[»] chr7 (49 HSPs)
chr7 (179-431)||(26565323-26565573)
chr7 (179-394)||(30294357-30294563)
chr7 (277-432)||(39182357-39182511)
chr7 (219-432)||(21846220-21846431)
chr7 (219-431)||(14055395-14055610)
chr7 (219-431)||(14365423-14365638)
chr7 (219-429)||(20570662-20570870)
chr7 (181-377)||(21157521-21157706)
chr7 (219-431)||(5058673-5058882)
chr7 (285-431)||(1977758-1977902)
chr7 (181-311)||(17809021-17809151)
chr7 (219-432)||(4247500-4247711)
chr7 (238-430)||(4574879-4575083)
chr7 (306-431)||(22687042-22687166)
chr7 (219-431)||(17811491-17811702)
chr7 (219-431)||(44944620-44944830)
chr7 (219-376)||(8329873-8330030)
chr7 (219-370)||(24725307-24725462)
chr7 (240-357)||(27509260-27509375)
chr7 (184-308)||(23618339-23618463)
chr7 (241-376)||(8346360-8346495)
chr7 (181-296)||(1981245-1981360)
chr7 (240-396)||(7730168-7730324)
chr7 (219-431)||(5715433-5715635)
chr7 (184-308)||(25842641-25842765)
chr7 (276-434)||(8343574-8343731)
chr7 (219-433)||(27221562-27221771)
chr7 (270-431)||(24989549-24989708)
chr7 (349-433)||(10285676-10285759)
chr7 (287-361)||(8329823-8329897)
chr7 (227-308)||(8254016-8254096)
chr7 (287-358)||(8346313-8346384)
chr7 (218-311)||(7307141-7307232)
chr7 (238-311)||(8629635-8629707)
chr7 (344-432)||(1981099-1981186)
chr7 (240-319)||(26617363-26617440)
chr7 (242-361)||(6916946-6917063)
chr7 (270-432)||(11325173-11325333)
chr7 (318-384)||(17741886-17741952)
chr7 (336-429)||(8304346-8304438)
chr7 (277-370)||(11326484-11326577)
chr7 (224-296)||(8304220-8304293)
chr7 (224-263)||(24990012-24990051)
chr7 (7-93)||(2432470-2432556)
chr7 (249-311)||(26340279-26340341)
chr7 (272-317)||(27221511-27221556)
chr7 (331-384)||(48621476-48621529)
chr7 (7-98)||(2434551-2434642)
chr7 (277-317)||(17811445-17811485)
[»] chr4 (43 HSPs)
chr4 (192-432)||(6346729-6346968)
chr4 (183-395)||(8010946-8011158)
chr4 (192-436)||(7045058-7045303)
chr4 (179-402)||(9149525-9149749)
chr4 (179-370)||(7044866-7045057)
chr4 (224-432)||(24719723-24719923)
chr4 (182-432)||(7452616-7452860)
chr4 (233-432)||(10394768-10394965)
chr4 (183-433)||(18459404-18459638)
chr4 (183-325)||(4156960-4157101)
chr4 (8-98)||(19888575-19888665)
chr4 (219-431)||(36120968-36121177)
chr4 (219-375)||(10143043-10143199)
chr4 (225-432)||(9770262-9770467)
chr4 (219-402)||(5361768-5361948)
chr4 (219-431)||(17466223-17466433)
chr4 (219-430)||(23064737-23064946)
chr4 (179-265)||(7825153-7825239)
chr4 (219-397)||(9911219-9911396)
chr4 (183-432)||(55476082-55476343)
chr4 (8-98)||(31889616-31889706)
chr4 (181-432)||(8743539-8743803)
chr4 (219-373)||(5375808-5375962)
chr4 (212-432)||(8889365-8889571)
chr4 (288-431)||(37240450-37240593)
chr4 (192-402)||(5943062-5943259)
chr4 (179-248)||(7815750-7815819)
chr4 (179-243)||(7803199-7803263)
chr4 (218-305)||(8409724-8409810)
chr4 (318-424)||(4157269-4157377)
chr4 (318-424)||(4157556-4157664)
chr4 (218-305)||(18403671-18403757)
chr4 (181-266)||(22060668-22060755)
chr4 (218-273)||(5846050-5846105)
chr4 (182-305)||(20812633-20812759)
chr4 (223-282)||(8020724-8020783)
chr4 (224-296)||(5884202-5884274)
chr4 (219-263)||(13023714-13023758)
chr4 (352-428)||(46664152-46664227)
chr4 (272-317)||(9911402-9911447)
chr4 (276-317)||(13023667-13023708)
chr4 (222-266)||(27527944-27527988)
chr4 (240-276)||(46664233-46664269)
[»] scaffold0603 (1 HSPs)
scaffold0603 (179-424)||(8741-8985)
[»] chr2 (38 HSPs)
chr2 (179-431)||(25538920-25539171)
chr2 (181-431)||(16766892-16767140)
chr2 (179-431)||(8428328-8428576)
chr2 (180-397)||(27406895-27407113)
chr2 (179-432)||(19245686-19245944)
chr2 (240-432)||(13502448-13502638)
chr2 (179-311)||(19492035-19492168)
chr2 (219-420)||(35565740-35565939)
chr2 (179-344)||(5395384-5395549)
chr2 (270-432)||(20063917-20064078)
chr2 (219-429)||(15588632-15588835)
chr2 (181-308)||(41002117-41002244)
chr2 (181-432)||(974429-974694)
chr2 (235-434)||(19262088-19262285)
chr2 (219-432)||(1690509-1690713)
chr2 (179-311)||(31023406-31023537)
chr2 (181-432)||(21869095-21869359)
chr2 (200-311)||(34841705-34841816)
chr2 (179-384)||(15627847-15628052)
chr2 (241-431)||(30432981-30433169)
chr2 (219-396)||(31237785-31237962)
chr2 (219-396)||(1404927-1405103)
chr2 (186-432)||(7301884-7302137)
chr2 (185-309)||(26251621-26251749)
chr2 (184-308)||(34577986-34578108)
chr2 (219-308)||(20034132-20034220)
chr2 (232-311)||(19519530-19519609)
chr2 (224-373)||(36429997-36430145)
chr2 (302-383)||(29661095-29661176)
chr2 (336-424)||(20034004-20034091)
chr2 (331-427)||(31062316-31062411)
chr2 (181-253)||(27749713-27749787)
chr2 (219-266)||(31578148-31578195)
chr2 (336-421)||(27523881-27523965)
chr2 (182-226)||(13502943-13502987)
chr2 (331-398)||(34167543-34167611)
chr2 (339-431)||(16767185-16767277)
chr2 (277-317)||(31237968-31238008)
[»] chr5 (33 HSPs)
chr5 (179-434)||(24648120-24648368)
chr5 (179-431)||(43005634-43005886)
chr5 (199-431)||(26021444-26021665)
chr5 (230-431)||(27339962-27340164)
chr5 (219-430)||(18843859-18844068)
chr5 (219-432)||(43235012-43235223)
chr5 (219-432)||(19579086-19579299)
chr5 (181-397)||(19377704-19377924)
chr5 (224-431)||(41688441-41688645)
chr5 (8-98)||(25635400-25635490)
chr5 (219-368)||(23172265-23172413)
chr5 (239-432)||(18051307-18051498)
chr5 (219-431)||(20321086-20321297)
chr5 (185-277)||(30804032-30804124)
chr5 (181-433)||(41427510-41427775)
chr5 (219-383)||(21058978-21059141)
chr5 (227-431)||(15051872-15052081)
chr5 (243-358)||(38158111-38158224)
chr5 (229-296)||(9996892-9996959)
chr5 (181-361)||(30799497-30799682)
chr5 (181-308)||(15446302-15446431)
chr5 (227-373)||(19042260-19042404)
chr5 (181-266)||(22984752-22984839)
chr5 (314-432)||(13341471-13341588)
chr5 (224-277)||(187812-187865)
chr5 (181-230)||(13349509-13349558)
chr5 (366-431)||(19979858-19979922)
chr5 (336-402)||(22984600-22984670)
chr5 (331-377)||(17624856-17624902)
chr5 (219-257)||(19979743-19979781)
chr5 (181-250)||(29270235-29270303)
chr5 (277-317)||(19579040-19579080)
chr5 (336-396)||(22645536-22645596)
[»] chr8 (33 HSPs)
chr8 (224-432)||(29384086-29384297)
chr8 (231-432)||(15761132-15761332)
chr8 (224-432)||(11879749-11879955)
chr8 (224-432)||(11897165-11897371)
chr8 (270-431)||(17647191-17647351)
chr8 (219-432)||(6810965-6811174)
chr8 (187-432)||(1017973-1018199)
chr8 (252-428)||(24056348-24056523)
chr8 (185-347)||(8582153-8582314)
chr8 (214-427)||(45403168-45403379)
chr8 (179-432)||(17566213-17566453)
chr8 (219-431)||(23142319-23142528)
chr8 (219-431)||(31424307-31424518)
chr8 (224-432)||(22909978-22910182)
chr8 (183-311)||(26575017-26575147)
chr8 (224-429)||(5922198-5922400)
chr8 (219-370)||(15294814-15294963)
chr8 (219-370)||(15475183-15475332)
chr8 (219-434)||(7489055-7489268)
chr8 (290-432)||(15231835-15231976)
chr8 (224-396)||(19704266-19704435)
chr8 (219-430)||(3094020-3094228)
chr8 (219-383)||(32424476-32424641)
chr8 (181-266)||(40541772-40541858)
chr8 (224-273)||(16752159-16752208)
chr8 (290-431)||(24414062-24414202)
chr8 (219-318)||(27836351-27836449)
chr8 (242-308)||(2040273-2040338)
chr8 (337-422)||(2040380-2040464)
chr8 (239-311)||(26879737-26879810)
chr8 (344-432)||(26879778-26879865)
chr8 (364-429)||(11973942-11974006)
chr8 (336-373)||(27836131-27836168)
[»] chr1 (40 HSPs)
chr1 (179-432)||(17055694-17055943)
chr1 (219-429)||(47786003-47786209)
chr1 (212-432)||(13100328-13100545)
chr1 (224-432)||(25146542-25146749)
chr1 (179-345)||(27917232-27917395)
chr1 (224-430)||(21846050-21846254)
chr1 (8-98)||(29402323-29402413)
chr1 (227-429)||(32881479-32881672)
chr1 (277-432)||(41032547-41032701)
chr1 (219-429)||(16125232-16125440)
chr1 (240-432)||(16434674-16434864)
chr1 (219-432)||(23528800-23529011)
chr1 (224-403)||(9954835-9955015)
chr1 (219-377)||(18304639-18304796)
chr1 (179-311)||(18891488-18891620)
chr1 (210-396)||(17869559-17869744)
chr1 (290-432)||(30619156-30619295)
chr1 (219-432)||(9351837-9352048)
chr1 (270-432)||(12513472-12513626)
chr1 (291-431)||(14074258-14074397)
chr1 (219-308)||(12002769-12002857)
chr1 (219-432)||(42179845-42180050)
chr1 (219-325)||(13276146-13276251)
chr1 (219-305)||(17197441-17197526)
chr1 (274-397)||(19009756-19009879)
chr1 (181-275)||(24117600-24117694)
chr1 (228-424)||(9128619-9128816)
chr1 (339-396)||(22789446-22789503)
chr1 (270-345)||(18228458-18228533)
chr1 (190-292)||(18337205-18337300)
chr1 (336-429)||(17197306-17197398)
chr1 (223-306)||(9327113-9327194)
chr1 (277-317)||(13276257-13276297)
chr1 (311-377)||(21242855-21242921)
chr1 (277-317)||(9327206-9327246)
chr1 (378-434)||(9954768-9954823)
chr1 (277-317)||(9955026-9955066)
chr1 (277-317)||(12513379-12513419)
chr1 (340-427)||(18337135-18337222)
chr1 (277-317)||(19009937-19009977)
[»] chr6 (39 HSPs)
chr6 (219-432)||(23897955-23898165)
chr6 (179-376)||(4841658-4841853)
chr6 (219-432)||(19748477-19748688)
chr6 (219-432)||(7223656-7223870)
chr6 (275-421)||(2912046-2912191)
chr6 (270-432)||(11327336-11327497)
chr6 (219-431)||(30912181-30912397)
chr6 (224-428)||(26053074-26053276)
chr6 (224-428)||(26073127-26073329)
chr6 (219-432)||(7918124-7918333)
chr6 (254-431)||(3573674-3573851)
chr6 (179-402)||(20432397-20432633)
chr6 (181-432)||(33592925-33593189)
chr6 (224-432)||(17103344-17103550)
chr6 (180-308)||(18490536-18490664)
chr6 (179-402)||(31407397-31407635)
chr6 (224-432)||(27890522-27890741)
chr6 (219-402)||(15527913-15528095)
chr6 (219-432)||(17543504-17543725)
chr6 (274-432)||(22498214-22498371)
chr6 (194-296)||(20399995-20400099)
chr6 (198-282)||(5422582-5422665)
chr6 (181-311)||(7621875-7622006)
chr6 (232-370)||(27233134-27233271)
chr6 (240-325)||(10508897-10508982)
chr6 (343-432)||(21354942-21355030)
chr6 (336-428)||(27614434-27614525)
chr6 (218-265)||(645416-645463)
chr6 (333-428)||(23506099-23506193)
chr6 (224-308)||(21354889-21354972)
chr6 (331-428)||(1179079-1179177)
chr6 (312-433)||(33583439-33583559)
chr6 (232-311)||(4596761-4596843)
chr6 (277-317)||(17103293-17103333)
chr6 (179-229)||(3573866-3573916)
chr6 (185-311)||(31108252-31108377)
chr6 (334-387)||(20399892-20399945)
chr6 (277-317)||(7223610-7223650)
chr6 (181-217)||(28669420-28669456)
[»] scaffold0042 (1 HSPs)
scaffold0042 (219-427)||(93483-93691)
[»] scaffold0048 (5 HSPs)
scaffold0048 (247-431)||(61089-61272)
scaffold0048 (247-370)||(48497-48620)
scaffold0048 (180-228)||(48674-48722)
scaffold0048 (403-431)||(48445-48473)
scaffold0048 (188-249)||(48616-48679)
[»] scaffold0186 (1 HSPs)
scaffold0186 (219-432)||(8587-8796)
[»] scaffold0016 (1 HSPs)
scaffold0016 (246-434)||(56197-56384)
[»] scaffold0534 (1 HSPs)
scaffold0534 (179-432)||(785-1025)
[»] scaffold0510 (1 HSPs)
scaffold0510 (277-391)||(18-131)
[»] scaffold1178 (1 HSPs)
scaffold1178 (181-310)||(426-556)
[»] scaffold0417 (1 HSPs)
scaffold0417 (224-384)||(7276-7435)
[»] scaffold0115 (1 HSPs)
scaffold0115 (180-291)||(34903-35014)
[»] scaffold0028 (1 HSPs)
scaffold0028 (311-431)||(145823-145942)
[»] scaffold0017 (1 HSPs)
scaffold0017 (185-273)||(38475-38565)
[»] scaffold0150 (1 HSPs)
scaffold0150 (270-384)||(33127-33246)
[»] scaffold0684 (1 HSPs)
scaffold0684 (181-306)||(5124-5249)
[»] scaffold0061 (1 HSPs)
scaffold0061 (224-273)||(76257-76306)
[»] scaffold0027 (1 HSPs)
scaffold0027 (184-308)||(133025-133149)
[»] scaffold0001 (1 HSPs)
scaffold0001 (181-266)||(142722-142809)
[»] scaffold0259 (1 HSPs)
scaffold0259 (232-311)||(18540-18619)
[»] scaffold0526 (1 HSPs)
scaffold0526 (219-308)||(8288-8375)
[»] scaffold0163 (1 HSPs)
scaffold0163 (224-306)||(2913-2994)
[»] scaffold0182 (1 HSPs)
scaffold0182 (232-305)||(24530-24602)
[»] scaffold2084 (1 HSPs)
scaffold2084 (336-432)||(88-183)
[»] scaffold0036 (1 HSPs)
scaffold0036 (191-237)||(37057-37103)
[»] scaffold0079 (1 HSPs)
scaffold0079 (336-432)||(14700-14795)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 3e-74; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 179 - 428
Target Start/End: Original strand, 27676540 - 27676787
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||    
T  27676540 ttagtcatttatgtataagtattttgtgga-tttaaaccgagtcatttatgactatatataatttataacatatatttaacattgtttttgttttggtaa 27676638  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| || ||||||||||  || |||||||||||||||||||||| |  || ||||||||||||||||| |||||||||||||  ||||||| |||||||    
T  27676639 aatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgattttgattgcgattttaagattttc 27676738  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaac 428  Q
    |||||| |||||||||||| | ||||||||||||||| |||||| |||||    
T  27676739 gattttgctcttccctttcga-cttgaagcaaaatcctgattttaacaac 27676787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 219 - 434
Target Start/End: Original strand, 42696991 - 42697204
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||| | ||| ||| | ||||||||||||| ||||||||||||| ||| |||| ||||||||||||    
T  42696991 agtcatttatgactatataccatttataacatatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgatttcttatat 42697090  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || ||||||||| ||||||||||| |||||  ||  |||||||| ||| |||| |||||||||| | ||| ||| ||||||||||||| ||    
T  42697091 cgattctacaaaagtagttgaataaaatccttcaattttagttgcgattttacaattgtcga-ttttctcttctcattcgacc-tgaagcaaaatcctga 42697188  T
Q  419 ttttgacaaccttgtt 434  Q
    ||||||||||||||||    
T  42697189 ttttgacaaccttgtt 42697204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 232 - 432
Target Start/End: Complemental strand, 25870294 - 25870096
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaata 331  Q
    ||||||| ||||||||||||||||||| ||||||  | ||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||  ||      
T  25870294 tatataccatttataacatatatttagtattattgtt-ttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaac 25870196  T
Q  332 gtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
     |||||||||||||||||| ||||||| ||  |||||||||||| |||||||| |||||| ||||| ||| | |||||||||| ||||||||||||||||    
T  25870195 ttagttgagtaaaatcctttgattttggttgcgattttacgattgtcgattttactcttctctttcgacc-taaagcaaaatctcgattttgacaacctt 25870097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 252 - 431
Target Start/End: Complemental strand, 10872668 - 10872490
Alignment:
Q  252 tatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttc 351  Q
    |||||| |||||||| ||||||||||||||| ||| ||||| |||  || ||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  10872668 tatttaacattatttttgttttggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttc 10872569  T
Q  352 gattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
     |||||||||  ||||||| |||||| ||||||||||||||||||  ||| ||||| ||||||| |||||||||||||||    
T  10872568 aattttgattgcgattttatgatttttgatttttctcttcccttttgacc-tgaagtaaaatcctgattttgacaacctt 10872490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 432
Target Start/End: Original strand, 13286113 - 13286299
Alignment:
Q  245 taacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaa 344  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||| |||  || ||||||||||||||||||||||||  || ||||||||||||||    
T  13286113 taacatatagttagtattatttttgttttggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaa 13286212  T
Q  345 atccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||| || ||||||||||  |||||||||| ||| ||||||||||||||||| | ||| |||||||||||   ||||||||||||||||    
T  13286213 atcttttgattttgattgcgattttacgagttttgatttttctcttcccttccgacc-tgaagcaaaattgtgattttgacaaccttg 13286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 229 - 395
Target Start/End: Complemental strand, 6136543 - 6136379
Alignment:
Q  229 gactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaa 328  Q
    ||||||||||||||||  ||||||| |||| ||||||| ||||||||||||||| |||||||||||||  || ||||||||||||||||||||||||  |    
T  6136543 gactatatacaattta--acatatagttagtattatttttgttttggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctata 6136446  T
Q  329 atagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctt 395  Q
    | ||||||||||||||||| || ||||||||||  |||||||||||||| |||||| || |||||||    
T  6136445 aaagtagttgagtaaaatcttttgattttgattgcgattttacgatttttgattttgcttttccctt 6136379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 15515241 - 15515032
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||   ||||||||||||| || |||||| ||||  | ||||| ||||||| ||     
T  15515241 agtcatttatgactatataccatttataacatatatttagtattattt---ttttggtaaaatccatggatttttattataattttacaatttcttctaa 15515145  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
     ||||||  || |||||||||||||||| ||||||||||  ||| |||||||| ||| ||||||||  || || ||||||||| ||||||||||||||||    
T  15515144 tgattctataaaagtagttgagtaaaatacttcgattttagttaagattttacaattgtcgattttggtcatctctttcaacc-tgaagcaaaatcccga 15515046  T
Q  419 ttttgacaaccttg 432  Q
    |||| |||||||||    
T  15515045 ttttaacaaccttg 15515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 237 - 432
Target Start/End: Original strand, 28135923 - 28136117
Alignment:
Q  237 acaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagt 336  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||  || |||||||||| | | ||||| |||||||||||| ||| |  || ||||||    
T  28135923 acaatttataacatatgtttaacattatttttgttttggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagt 28136022  T
Q  337 tgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||||||||||||||||||||||   |||||||||||| |||||||| |||| || ||| || ||||||| |||||||  |||||||||||||||    
T  28136023 tgagtaaaatccttcgattttgatagcgattttacgattctcgattttactctaccattttaa-cttgaagtaaaatcctaattttgacaaccttg 28136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 247 - 432
Target Start/End: Complemental strand, 3449266 - 3449084
Alignment:
Q  247 acatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaat 346  Q
    |||||||||||| ||||||| |  |||||||||||| ||| ||||||||| ||| |||||  |||||||||||||||||  || ||||||||| ||||||    
T  3449266 acatatatttagtattattttt--tttggtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaat 3449169  T
Q  347 ccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    | |||||||||| ||  |||||||||||| |||||||| |||||| ||||||||| | |||||||||||| |||||||||||||||    
T  3449168 cattcgattttggttgcgattttacgattgtcgattttgctcttctctttcaacc-taaagcaaaatcccaattttgacaaccttg 3449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 249 - 431
Target Start/End: Original strand, 17064481 - 17064661
Alignment:
Q  249 atatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatcc 348  Q
    |||||||||| ||| ||| | ||||||||||||| ||||||||||||| | | ||||| ||||||||||| ||||||  || ||||||||||||||||||    
T  17064481 atatatttagtatttttttt-ttttggtaaaatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatcc 17064579  T
Q  349 ttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    |||||||||||||  |||||||||||| ||||||||  ||||  ||||| ||| |||||||||||||| ||||||||||||||    
T  17064580 ttcgattttgattgcgattttacgattgtcgattttgatcttttctttcgacc-tgaagcaaaatcccaattttgacaacctt 17064661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 179 - 430
Target Start/End: Original strand, 17796672 - 17796918
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||| ||||||| ||||||  |||||||||| |||| ||||| | ||||||||||||||||||  ||||| ||| ||||| | ||||||  |    
T  17796672 ttagtcatttatttataagtgttttgtgaactttaaaccaagtcatttattaatatatacaatttataacagttattttgcactatttttattttgg--a 17796769  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
     ||| ||| ||||||||| ||| ||||||||||||  ||||||||||  || |||||||||||||||| |||||||||| |||   |||||||||||||     
T  17796770 catccatcaattttgatttcgattttacgatttct--tatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttt 17796867  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacct 430  Q
     |||||||| ||||||||| ||| |||| ||||||| | ||||||| |||||    
T  17796868 tatttttcttttccctttcgacc-tgaatcaaaatctcaattttgataacct 17796918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 179 - 430
Target Start/End: Original strand, 19105112 - 19105358
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||| ||||||| ||||||  |||||||||| |||| ||||| | ||||||||||||||||||  ||||| ||| ||||| | ||||||  |    
T  19105112 ttagtcatttatttataagtgttttgtgaactttaaaccaagtcatttattaatatatacaatttataacagttattttgcactatttttattttgg--a 19105209  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
     ||| ||| ||||||||| ||| ||||||||||||  ||||||||||  || |||||||||||||||| |||||||||| |||   |||||||||||||     
T  19105210 catccatcaattttgatttcgattttacgatttct--tatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttt 19105307  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacct 430  Q
     |||||||| ||||||||| ||| |||| ||||||| | ||||||| |||||    
T  19105308 tatttttcttttccctttcgacc-tgaatcaaaatctcaattttgataacct 19105358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 219 - 428
Target Start/End: Original strand, 22137421 - 22137628
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||| ||||||||| ||||||  | |||| |||||||| ||| |||||||||  |  |||||||||||||||||    
T  22137421 agtcatttatgactatatactatttataac-tatatttagtattattaatttttttgtaaaatccatcaattttgattttggttttacgatttcttatat 22137519  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||||||||||||||| ||| ||||||| || ||||||||| |||   |||||| |||||| ||||| ||| |||| ||||||| |||    
T  22137520 cgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttactattgctgattttgctcttctctttcgacc-tgaaacaaaatctcga 22137618  T
Q  419 ttttgacaac 428  Q
    ||||||||||    
T  22137619 ttttgacaac 22137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 28745920 - 28746131
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||  |||| || | ||| ||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  28745920 agtcatttatgactatatactatttataacatatatttactattaatttt-tttgggtaaaatccatcgattttgattgcgattttacaatttcctatat 28746018  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  ||||||||||| ||||||||||||||  |||||||||| |  ||||||| || ||  ||||| ||| ||||| ||| |||| |    
T  28746019 cgattctacaaaagttcttgagtaaaattcttcgattttgattgcgattttacgagtcccgattttgctattttctttcgacc-tgaagtaaagtcccaa 28746117  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  28746118 ttttgacaaccttg 28746131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 270 - 432
Target Start/End: Complemental strand, 9152919 - 9152760
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttt 369  Q
    ||||||||||||| |||||||||||||  || ||||| ||||| || |||||||||  || | ||||||||| ||||| |||||||||| ||| ||||||    
T  9152919 ttttggtaaaatctatcgattttgattgtgattttacaatttcata-atcgattctacaaaaatagttgagtcaaatctttcgattttggttacgatttt 9152821  T
Q  370 acgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||| | |||||| |||||| ||||| ||||  ||||||||||| ||||||||||||||||    
T  9152820 acgattgttgattttactcttctctttcgacct--aagcaaaatcctgattttgacaaccttg 9152760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 41671434 - 41671534
Alignment:
Q  331 agtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacct 430  Q
    |||||||||||||||||||||||||||| ||  |||||||| ||| |||||||| |||||| ||||| ||| ||||||||||||||||||||||||||||    
T  41671434 agtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacc-tgaagcaaaatcccgattttgacaacct 41671532  T
Q  431 tg 432  Q
    ||    
T  41671533 tg 41671534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 219 - 428
Target Start/End: Original strand, 39428046 - 39428258
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| | ||||||||||||||||| |||| || | ||| ||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  39428046 agtcatttatgactatatactacttataacatatatttagtattaattttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatat 39428145  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcg----attttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatc 414  Q
    ||||||   || | |  |||||||||||||||||    |||||||||  ||||||| || |  ||||||| || |||||||||||||   ||| ||| ||    
T  39428146 cgattccacaaaaatctttgagtaaaatccttcgatttattttgattgcgattttatgagtcccgattttgctattccctttcaacc-gcaagtaaagtc 39428244  T
Q  415 ccgattttgacaac 428  Q
    ||||||||||||||    
T  39428245 ccgattttgacaac 39428258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 8592397 - 8592173
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga---------- 308  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||  | |||||||||| ||| |||||||              
T  8592397 agtcatttatgactatatgcaatttataacatatatttatcattatttttgttttggtagaatcctt-gattttgattgcgattttacgagacccgattt 8592299  T
Q  309 ---tttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttga 405  Q
       | || ||||||||||||  || |||  ||||||||||||||||||||||||||  |||||||||| | |||||||| || || |||||| | |||||    
T  8592298 tgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctatttcctttcga-cttga 8592200  T
Q  406 agcaaaatcccgattttgacaaccttg 432  Q
    || ||| ||||||||| ||||||||||    
T  8592199 agtaaagtcccgatttcgacaaccttg 8592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 6861165 - 6861033
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaac--cgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||| ||||||||| | ||||||  |||||||||  ||| || |||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||     
T  6861165 agtcatatatgtataaatgttttgtgcactttaaacttcgaatcatttatgactatagacaatttataacatatagttagctttatttttgttttggtag 6861066  T
Q  279 aatcaatcgattttgattacgaatttacgattt 311  Q
    |||| ||||||||||||| ||| |||| |||||    
T  6861065 aatccatcgattttgattgcgattttatgattt 6861033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 240 - 373
Target Start/End: Original strand, 20756187 - 20756319
Alignment:
Q  240 atttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttga 339  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||  || | |  ||||    
T  20756187 atttataacatatatttagtattatttct-tttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttga 20756285  T
Q  340 gtaaaatccttcgattttgattatgattttacga 373  Q
    |||||||| ||| |||||||||  ||||||||||    
T  20756286 gtaaaatctttcaattttgattgcgattttacga 20756319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 424
Target Start/End: Original strand, 21963587 - 21963778
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttg-gtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaat 330  Q
    ||||||| ||||||||| ||||||||| ||||||  | ||||  |||||||| ||| |||||||||  |  ||||||||||||||||||||||||  ||     
T  21963587 tatatactatttataac-tatatttagtattattaattttttttgtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaa 21963685  T
Q  331 agtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
    |||| ||||||||||| |||  |||||| || ||||||||| ||| |||||||| |||||| ||||| ||| |||| ||||||| |||||||||    
T  21963686 agtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacc-tgaaacaaaatctcgattttga 21963778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 232 - 424
Target Start/End: Original strand, 21986023 - 21986214
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttg-gtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaat 330  Q
    ||||||| ||||||||| ||||||||| ||||||  | ||||  |||||||| ||| |||||||||  |  ||||||||||||||||||||||||  ||     
T  21986023 tatatactatttataac-tatatttagtattattaattttttttgtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaa 21986121  T
Q  331 agtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
    |||| ||||||||||| |||  |||||| || ||||||||| ||| |||||||| |||||| ||||| ||| |||| ||||||| |||||||||    
T  21986122 agtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacc-tgaaacaaaatctcgattttga 21986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 431
Target Start/End: Complemental strand, 8156110 - 8155904
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgtttt-ggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgat 322  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||  | |||| ||||||||| | |||| |||||| ||| |||||  ||||||||||| ||    
T  8156110 tttataactatataccatttataacatatatttagtattattattatttttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaat 8156012  T
Q  323 tcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgatttt 422  Q
     ||  || |||||||||||||||||||||||| ||  ||  ||||||| |||| || ||||| |||||| ||| | ||| ||||||||||| |  |||||    
T  8156011 gctacaaaagtagttgagtaaaatccttcgatcttagttgcgattttatgattgtccattttgctcttctcttaccacc-tgaagcaaaattctaatttt 8155913  T
Q  423 gacaacctt 431  Q
    |||||||||    
T  8155912 gacaacctt 8155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 219 - 431
Target Start/End: Complemental strand, 24620185 - 24619972
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatt--tctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttat 316  Q
    |||| ||||||| ||||||| |||||||| |||||||||| ||| ||  | | ||||||||||||| | | ||||||||| ||| ||||| ||||  |||    
T  24620185 agtcatttatgattatataccatttataaaatatatttagtatttttatttttttttggtaaaatccaacaattttgattgcgattttacaattttctat 24620086  T
Q  317 atcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatccc 416  Q
    |||||||||  || |||  ||||||||||||||||||||||||||  |||||||| | |  | ||||| || ||||||||  | ||||||| ||| | ||    
T  24620085 atcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgattttacaagtcccaattttgctattcccttttga-cttgaagtaaagttcc 24619987  T
Q  417 gattttgacaacctt 431  Q
    |||||||||||||||    
T  24619986 gattttgacaacctt 24619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 19348684 - 19348772
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| |||||||    
T  19348684 agtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtataatc-ctcgattttgattgcgattttacga 19348772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 22970903 - 22971016
Alignment:
Q  184 catttatgtataagtattttgtagactttaaaccg-agtc-ttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaat 281  Q
    |||||||||||| ||||||||| |||||| |||   |||| |||||||||||||| ||||||||||||||||| || |||||||| |||||||||| |||    
T  22970903 catttatgtatatgtattttgtggactttgaactttagtcattttatgactatatgcaatttataacatatatataacattatttttgttttggtagaat 22971002  T
Q  282 caatcgattttgatt 296  Q
    |  ||||||||||||    
T  22971003 c-ctcgattttgatt 22971016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 185 - 308
Target Start/End: Original strand, 18014089 - 18014210
Alignment:
Q  185 atttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatca 283  Q
    ||||||||||| ||||||||| |||||| |||   |||| |||||||||||   ||||||||||||||||||||||||||||| ||||||| || ||||     
T  18014089 atttatgtatatgtattttgtggactttgaactttagtcatttatgactatg--caatttataacatatatttagcattatttttgttttgatagaatc- 18014185  T
Q  284 atcgattttgattacgaatttacga 308  Q
     |||||||||||| ||| |||||||    
T  18014186 ctcgattttgattgcgattttacga 18014210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 9169809 - 9169880
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgatt 296  Q
    ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||  ||||||||||||    
T  9169809 tttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatc-ctcgattttgatt 9169880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 15806352 - 15806288
Alignment:
Q  236 tacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacga 300  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| ||| ||| |||||||||    
T  15806352 tacaatttataacatatatttagcattatttttgttttggtagaatccatcaattctgattacga 15806288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 10872890 - 10872816
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatata 253  Q
    |||||||||||||| |||||||||||| ||||||||||   ||| |||||||| | |||||||||||||||||||    
T  10872890 ttagtcatttatgtttaagtattttgtggactttaaactatgtcatttatgacaaaatacaatttataacatata 10872816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 434
Target Start/End: Original strand, 27090702 - 27090799
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgtt 434  Q
    |||||||||||||||||||||| |||  ||| ||||||||| | |||||||| ||||||||| ||| | ||| |||||| |||||| ||||||||||||    
T  27090702 ttgagtaaaatccttcgatttttattgcgatcttacgatttgcaatttttctattccctttcgacc-taaagtaaaatctcgatttcgacaaccttgtt 27090799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 8560435 - 8560367
Alignment:
Q  238 caatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    ||||||||||||||||||||||||||||| | |||||||| |||| ||||||||||||| ||| |||||||    
T  8560435 caatttataacatatatttagcattattt-tattttggtagaatc-atcgattttgattgcgattttacga 8560367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 10591789 - 10591839
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  10591789 tatatgcaatttataacatatatttagcattatttttgttttggtagaatc 10591839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 274 - 432
Target Start/End: Original strand, 29067475 - 29067631
Alignment:
Q  274 ggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacga 373  Q
    ||||||||| ||||||||||||| ||| ||||| | |||  ||||| |||||  || | |  |||||||||||||||||| |||||||  ||||||| ||    
T  29067475 ggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcga-tttgattgagattttatga 29067573  T
Q  374 ttttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
     || ||||||| || ||||| ||| ||| ||||| ||| | ||||||||||||||||||    
T  29067574 gttccgattttgctattcccattcgacc-tgaagtaaagttccgattttgacaaccttg 29067631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 15806456 - 15806407
Alignment:
Q  183 tcatttatgtataagtattttgtagactttaaaccgagtcttttatgact 232  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||    
T  15806456 tcatttatgtataagtatttcgtggactttaaaccgagtcatttatgact 15806407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 424
Target Start/End: Original strand, 3041483 - 3041570
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
    ||||||||||||||||||||||||||  |||||||||| |  ||||||| ||  ||| |||| | ||||||| ||||||||||||||||    
T  3041483 ttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcga-cttgaagtaaaatcccgattttga 3041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 432
Target Start/End: Complemental strand, 8560326 - 8560231
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||||||||||||||||||||||||  ||||| |||| | |||||||| ||  |||||||  | ||||||| ||| |||||||||||| |||||||    
T  8560326 ttgagtaaaatccttcgattttgattgcgatttcacgagtctcgattttgctactcccttttga-cttgaagtaaagtcccgattttgataaccttg 8560231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 432
Target Start/End: Complemental strand, 15806309 - 15806222
Alignment:
Q  344 aatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||| || ||| |||||| |||| || ||||||||||||| || ||||||||| | || ||||||||||| |||||||||||||||||    
T  15806309 aatccatcaattctgattacgattgtatgattttcgattttgcttttccctttcgagct-gaagcaaaatctcgattttgacaaccttg 15806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 13006089 - 13006174
Alignment:
Q  340 gtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaa 427  Q
    |||||||| ||| |||||||||  ||||||||||||||| ||||| || ||||||||| ||| | |||| ||||||||||||||||||    
T  13006089 gtaaaatcattcaattttgattgcgattttacgattttcaattttgctattccctttcgacc-taaagc-aaatcccgattttgacaa 13006174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 24649633 - 24649586
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtctttt 226  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||||    
T  24649633 ttagtcatttatgtataagtattttgtgaactttaaagcgagtctttt 24649586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 21553888 - 21553802
Alignment:
Q  225 ttatgactatatacaatttataacatatatttag----cattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    |||||| ||||| |||||||||||||||||||||    |||||||| |||||||||| ||||  |||||||||||| ||| |||||||    
T  21553888 ttatgattatatgcaatttataacatatatttagtcaacattatttttgttttggtagaatc-ctcgattttgattgcgattttacga 21553802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 23649389 - 23649462
Alignment:
Q  238 caatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    |||||||||||||||||||| |||||||| || |||||| |||   |||||||||||||  |||||| ||||||    
T  23649389 caatttataacatatatttaacattatttttgctttggtgaaactcatcgattttgattgggaattttcgattt 23649462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 432
Target Start/End: Complemental strand, 20766770 - 20766675
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||||||||  |||||||||||||  |||||||||| | |||||||| ||  || ||||| |  |||||| ||| ||||||||||||||||||||    
T  20766770 ttgagtaaaatttttcgattttgattgcgattttacgagtctcgattttgctactctctttcga-gttgaagtaaagtcccgattttgacaaccttg 20766675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 27055258 - 27055306
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttt 272  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||| |||||    
T  27055258 tttatgattatatgcaatttacaacatatatttagcattatttttgttt 27055306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 431
Target Start/End: Original strand, 18014251 - 18014345
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||||||||||||||||||||||  |||||||||| |  | ||||| ||  ||| ||| || ||||||| ||| |||||||||||| ||||||    
T  18014251 ttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttgctactccattttaa-cttgaagtaaagtcccgattttgataacctt 18014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 434
Target Start/End: Original strand, 22971069 - 22971165
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgtt 434  Q
    ||||||||||||||||||||||||||  |||||||||| |  ||||||| ||  ||| |||  | ||||||| ||| |||| ||||||| |||||||||    
T  22971069 ttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactcctttt--aacttgaagtaaagtcccaattttgataaccttgtt 22971165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 22494767 - 22494734
Alignment:
Q  225 ttatgactatatacaatttataacatatatttag 258  Q
    |||||||||||||| |||||||||||||||||||    
T  22494767 ttatgactatataccatttataacatatatttag 22494734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 6861037 - 6860986
Alignment:
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    |||||| || ||||||||| |||| ||||||||||||| ||||||||||||||    
T  6861037 gattttactattccctttcgacct-gaagcaaaatcccaattttgacaacctt 6860986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 8156161 - 8156121
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  8156161 aaaatccatcgattttgattgcgattttacgatttcttata 8156121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 20756137 - 20756177
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||||||||||||||||| | | ||||||||||||||||    
T  20756137 aaaatcaatcgattttgattgcaattttacgatttcttata 20756177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 1e-73; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 179 - 431
Target Start/End: Complemental strand, 26565573 - 26565323
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||| | |||||||| |||||||||||    
T  26565573 ttagtcatttatgtataagtattttgtggactttaaactgagtcatttatgactatatacagtttataacatatattaa-cattatttttgttttggtaa 26565475  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| ||| ||||||||| | | |||||||||| |||||| ||||||  || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  26565474 aatccatcaattttgattgcaattttacgattttttatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattttc 26565375  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    | ||||  |||||||||| |||| ||||| || ||||| ||||||||||||||    
T  26565374 gtttttgttcttcccttttaacc-tgaagaaagatcccaattttgacaacctt 26565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 179 - 394
Target Start/End: Original strand, 30294357 - 30294563
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||||||||| |||||||| ||||||| || | ||| |||||        ||||||||||||||||||||| |||||| | |||||||||||    
T  30294357 ttagtcatttatgtataactattttgtggactttatactgggtcatttat--------acaatttataacatatatttaacattatctttgttttggtaa 30294448  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| ||||| |||||||  || |||| |||||||| ||||||||||  || ||||||| ||||||||||||||||||||||| ||| |||||||||||     
T  30294449 aatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaatccttcgattttgattgtga-tttacgattttt 30294547  T
Q  379 gatttttctcttccct 394  Q
    |||||| |||||||||    
T  30294548 gattttgctcttccct 30294563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 277 - 432
Target Start/End: Original strand, 39182357 - 39182511
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattt 376  Q
    |||||| |||||||||| || ||| ||||| ||||||||||||||||||  || |||||||||||||||||||||||||||| ||  ||||||||||||     
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattg 39182456  T
Q  377 tcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||||||||||||| ||||  | | |||||||||||| |||||||||||||||||    
T  39182457 tcgatttttctcttctctttggaac-tgaagcaaaatcacgattttgacaaccttg 39182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 21846431 - 21846220
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||  ||||||||||||||||||  ||||||| |  || ||||||||| ||| |||||||||  || |||||||||||||||||    
T  21846431 agtcatttatgactatatatcatttataacatatatttaatattatttat--ttgggtaaaatccatcaattttgattgtgattttacgatttcttatat 21846334  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccg- 417  Q
    |||||||  || ||||||||| |||||||||||||||||| ||  ||||||| |||||| |||||| |||| | ||||| ||||   ||||||||||||     
T  21846333 cgattctataaaagtagttgattaaaatccttcgattttggttgcgattttaggatttttgattttgctctcctctttcgacct--gagcaaaatcccga 21846236  T
Q  418 -attttgacaaccttg 432  Q
     |||||||||||||||    
T  21846235 tattttgacaaccttg 21846220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 14055395 - 14055610
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgtttt-----ggtaaaatcaatcgattttgattacgaatttacgatttct 313  Q
    |||| ||||||||||||||| ||||||||||||||||||  ||||| | | ||||     ||||||||| || |||||||||| ||| ||| | ||||||    
T  14055395 agtcatttatgactatataccatttataacatatatttaatattatcttttttttttgttggtaaaatccattgattttgattgcgattttgcaatttct 14055494  T
Q  314 tatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaat 413  Q
    ||||||| ||||  || |||||||||||||||||||||||||||| ||  |||||||| ||| |||||||| ||| || ||||| ||| |||||||||||    
T  14055495 tatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacc-tgaagcaaaat 14055593  T
Q  414 cccgattttgacaacctt 431  Q
     |||||||||||||||||    
T  14055594 -ccgattttgacaacctt 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 14365423 - 14365638
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgtttt-----ggtaaaatcaatcgattttgattacgaatttacgatttct 313  Q
    |||| ||||||||||||||| ||||||||||||||||||  ||||| | | ||||     ||||||||| || |||||||||| ||| ||| | ||||||    
T  14365423 agtcatttatgactatataccatttataacatatatttaatattatcttttttttttgttggtaaaatccattgattttgattgcgattttgcaatttct 14365522  T
Q  314 tatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaat 413  Q
    ||||||| ||||  || |||||||||||||||||||||||||||| ||  |||||||| ||| |||||||| ||| || ||||| ||| |||||||||||    
T  14365523 tatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacc-tgaagcaaaat 14365621  T
Q  414 cccgattttgacaacctt 431  Q
     |||||||||||||||||    
T  14365622 -ccgattttgacaacctt 14365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 219 - 429
Target Start/End: Complemental strand, 20570870 - 20570662
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||| || |||||||||| || |||||||||||||  || ||||  |||||||||||    
T  20570870 agtcatttatgactatataccatttataacatatatttagtattatt-cttttttggtaaagtccatcgattttgattgtgattttataatttcttatat 20570772  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  |||||||||||| ||| |||||||||  ||||||| || | || |||||  | ||||||||||||| ||||| | | ||||||    
T  20570771 cgattctacaaaagtccttgagtaaaatctttcaattttgattgcgattttatgagtctcaattttgttattccctttcaacc-tgaagtagagtcccga 20570673  T
Q  419 ttttgacaacc 429  Q
    |||||||||||    
T  20570672 ttttgacaacc 20570662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 181 - 377
Target Start/End: Complemental strand, 21157706 - 21157521
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaa 280  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||| |||||||||||||||||||||||| || |||||||||| ||    
T  21157706 agtcatttatgtataagtattttgtagactttaaac-gagtcatttacgattatataccatttataacatatatttagcattacttttgttttggtagaa 21157608  T
Q  281 tcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
    || || ||||||| |||| |          || ||||| ||||||  || ||||||||| ||||||||||| |||||||||  ||||||||||||||    
T  21157607 tccattgattttgtttacca----------tcctatatagattctacaaaagtagttgaataaaatccttcaattttgattgagattttacgatttt 21157521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 5058673 - 5058882
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||| || | |||||||||| || ||||||||||||| ||| ||||| |||| ||||||    
T  5058673 agtcatttatgactatataccatttataacatatatttagtatta-ttattttttggtaaagtccatcgattttgattgcgattttacaattttttatat 5058771  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    ||||||  ||| | |  |||| |||||||||||||||||||||   ||||||||| || ||||||| || ||||||||  | | ||||| ||| ||||||    
T  5058772 cgattcacaaa-attccttgattaaaatccttcgattttgattgcaattttacgaattccgattttgctattcccttttgatc-tgaagtaaagtcccga 5058869  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  5058870 ttttgacaacctt 5058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 285 - 431
Target Start/End: Original strand, 1977758 - 1977902
Alignment:
Q  285 tcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttt 384  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||| | || ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  1977758 tcgattttgattgcgattttaggatttcttatatcgattctaaaaaa-taattgagtaaaatccttcgattttgattgcgattttacgattgtcgatttt 1977856  T
Q  385 tctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||| ||||| ||| ||||||||||||  ||||||  |||||||    
T  1977857 tctcttctctttcgacc-tgaagcaaaatcttgattttaccaacctt 1977902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 17809151 - 17809021
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaa 280  Q
    |||||||||||||||||||||||  ||| || |||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  17809151 agtcatttatgtataagtatttttcagatttaaaactgagtcatttatgattatatgcaatttataacatatatttagcattatttttgttttggtagaa 17809052  T
Q  281 tcaatcgattttgattacgaatttacgattt 311  Q
    || ||  ||||||||| ||| ||||||||||    
T  17809051 tctatgaattttgattgcgattttacgattt 17809021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 4247500 - 4247711
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||  |||| |||||||||||||| ||||||| | ||| ||||||||| ||||||||||||| ||| |||| ||||||||||||    
T  4247500 agtcatttatgactatatatcatttgtaacatatatttagtattattttt-tttaggtaaaatccatcgattttgattgcgattttatgatttcttatat 4247598  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || | |  ||||||||||||||| || |||||||  |||||||||| |  | |||||| | ||||||||| | ||||||| ||| |||| |    
T  4247599 cgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacgaatcccaatttttgtattccctttcga-cttgaagtaaagtcccaa 4247697  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||| ||||    
T  4247698 ttttgacaatcttg 4247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 238 - 430
Target Start/End: Original strand, 4574879 - 4575083
Alignment:
Q  238 caatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt-------------cttatatcgattc 324  Q
    |||||||||||||||||| |||||||||| | ||||||||||||| ||||||||||| | ||| ||||||||||             | |||||||||||    
T  4574879 caatttataacatatattaagcattatttttattttggtaaaatctatcgattttgactgcgattttacgattttcaattttactatcctatatcgattc 4574978  T
Q  325 ttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
    |  || |||||||||||| ||| ||| ||||||||||  |||||||||||||| |||||| || ||||||||||||| ||||| |||||| | |||||||    
T  4574979 tacaaaagtagttgagtagaattctttgattttgattgcgattttacgatttttgattttactattccctttcaacc-tgaagaaaaatctcaattttga 4575077  T
Q  425 caacct 430  Q
    ||||||    
T  4575078 caacct 4575083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 306 - 431
Target Start/End: Complemental strand, 22687166 - 22687042
Alignment:
Q  306 cgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttga 405  Q
    ||||||||||||||||||||  || |||||||||||||||| |||| |||||| || ||||||||||||| |||||||| |||||| ||||| | | |||    
T  22687166 cgatttcttatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgattctcgattttgctcttctctttcgatc-tga 22687068  T
Q  406 agcaaaatcccgattttgacaacctt 431  Q
    ||||||||||||||||| ||||||||    
T  22687067 agcaaaatcccgattttaacaacctt 22687042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 17811491 - 17811702
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||| | ||||||| |||||||| |||||||||  |||| |  | ||| ||||||||| ||||||||||||| ||| ||||| ||||  |||||    
T  17811491 agtcatttataattatataccatttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgattgcgattttacaattttctatat 17811590  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  |||||||||||| |||||||||||||  |||||||||| |  ||||||| || ||||||||  ||| ||||| ||| ||||||    
T  17811591 cgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctattcccttttgacc-tgaagtaaagtcccga 17811689  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  17811690 ttttgacaacctt 17811702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 431
Target Start/End: Complemental strand, 44944830 - 44944620
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||||||  | |||||||||| || ||||||||||||| ||| ||||| |||||||||||    
T  44944830 agtcatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaagtctatcgattttgattgcgattttacaatttcttatat 44944732  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  || ||||||||  ||||||||| |||  |||||||||| |  ||  ||| || || |||||| | | ||||| ||| ||||||    
T  44944731 cgattctacaaaagtccttaagtaaaattgttcgattttaattgcgattttacgagtcccgcatttgctatttcctttcgatc-tgaagtaaagtcccga 44944633  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  44944632 ttttgacaacctt 44944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 219 - 376
Target Start/End: Complemental strand, 8330030 - 8329873
Alignment:
Q  219 agtcttttatgactatata-caatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||| |||||||||||||| || ||||||||||||| |||  ||| | | | ||||||||||||| || |||||||||| | | ||||||||||||||||    
T  8330030 agtcatttatgactatataccattttataacatatacttattatt-tattttttttggtaaaatccattgattttgattgcaattttacgatttcttata 8329932  T
Q  318 tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattt 376  Q
    || |||||  || |||||||||||||||||||| ||||||||||  |||||||||||||    
T  8329931 tcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgattttacgattt 8329873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 219 - 370
Target Start/End: Complemental strand, 24725462 - 24725307
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgtttt----ggtaaaatcaatcgattttgattacgaatttacgatttctt 314  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||   ||||    ||||||||| ||||||||||||| ||| ||||| ||||| |    
T  24725462 agtcatttatgactatataccatttataacatatatttagtattattttattttttttgggtaaaatccatcgattttgattgcgattttacaatttcct 24725363  T
Q  315 atatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttta 370  Q
    |||||||||||  || |||  ||||||||||||||| ||||||||||  |||||||    
T  24725362 atatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgatttta 24725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 27509375 - 27509260
Alignment:
Q  240 atttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttga 339  Q
    ||||||||||||||||||| ||||||| |  |||||||||||||||||| ||| ||| ||| ||||| ||||||||||||||||||  || |||||||||    
T  27509375 atttataacatatatttagtattattttt--tttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttga 27509278  T
Q  340 gtaaaatccttcgatttt 357  Q
    |||||||||||| |||||    
T  27509277 gtaaaatccttcaatttt 27509260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 23618463 - 23618339
Alignment:
Q  184 catttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    |||||||||||| |||||||||||||||| |||   |||| ||||||||||||| |||||||||| ||||||||| |||||||| |||||||||| ||||    
T  23618463 catttatgtatatgtattttgtagactttgaactttagtcatttatgactatatgcaatttataatatatatttaacattatttttgttttggtagaatc 23618364  T
Q  283 aatcgattttgattacgaatttacga 308  Q
      |||||||||||||||| |||||||    
T  23618363 -ctcgattttgattacgattttacga 23618339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 376
Target Start/End: Complemental strand, 8346495 - 8346360
Alignment:
Q  241 tttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgag 340  Q
    |||||||||||||||||| ||||||  | ||||||||||||| || |||| |||||  || |||| ||||||||||||| |||||  || ||||||||||    
T  8346495 tttataacatatatttagtattattatttttttggtaaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgag 8346396  T
Q  341 taaaatccttcgattttgattatgattttacgattt 376  Q
    |||||||||| ||||||||||  ||| |||||||||    
T  8346395 taaaatcctttgattttgattgcgatattacgattt 8346360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 1981360 - 1981245
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaa 279  Q
    ||||||||||||||| ||||||||| |||||| |||   |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||| || |    
T  1981360 agtcatttatgtatatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttgataga 1981261  T
Q  280 atcaatcgattttgatt 296  Q
    |||  ||||||||||||    
T  1981260 atc-ctcgattttgatt 1981245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 396
Target Start/End: Complemental strand, 7730324 - 7730168
Alignment:
Q  240 atttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttga 339  Q
    ||||||||||||||||||| ||| ||| | | ||||||||||| ||| ||||||||| ||| ||||| |||||||||||| ||| |  || |||||||||    
T  7730324 atttataacatatatttagtattttttttttgttggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttga 7730225  T
Q  340 gtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt 396  Q
    |||||| | |||||||||| ||  ||||||||||||   |||||| |||||| ||||    
T  7730224 gtaaaaccattcgattttggttgcgattttacgattgatgattttgctcttctcttt 7730168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 5715433 - 5715635
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||| ||||||| ||||||||||||||||   |||| ||| |  |||||||||||  ||||||||||||| ||| ||||  ||||| |||||    
T  5715433 agtcatttatgattatataccatttataacatatatt---catttttttt--tttggtaaaattcatcgattttgattgcgattttataatttcctatat 5715527  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  ||||||||||||| ||||||||||||  |||||||||| |  |||||||||| || |||||| ||     || ||| ||||||    
T  5715528 cgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacgagtcccgatttttctatttcctttcgac-----agtaaagtcccga 5715622  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  5715623 ttttgacaacctt 5715635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 25842765 - 25842641
Alignment:
Q  184 catttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    ||||||||| || ||||||||| |||||| |||   |||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||    
T  25842765 catttatgtgtatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatc 25842666  T
Q  283 aatcgattttgattacgaatttacga 308  Q
      |||||||||||| ||| |||||||    
T  25842665 -ctcgattttgattgcgattttacga 25842641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 276 - 434
Target Start/End: Complemental strand, 8343731 - 8343574
Alignment:
Q  276 taaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatt 375  Q
    ||||||| || || ||||||| ||| |||||||||| ||||||| |||||  || |||||||||||||||| ||||||||||||||    ||||||||||    
T  8343731 taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgcatttttacgatt 8343632  T
Q  376 ttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgtt 434  Q
     || |||||  ||||| ||||| ||| ||||||||||| | |||||| ||||| |||||    
T  8343631 gtcaattttgttcttctctttcgacc-tgaagcaaaattctgattttaacaactttgtt 8343574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 433
Target Start/End: Original strand, 27221562 - 27221771
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||| |||     ||| | |||||||| ||||| |||||||| ||| ||| ||||| ||||| || ||    
T  27221562 agtcatttatgactatataccatttataacatatatatag-----ttttttttttggtacaatcagtcgattttaattgcgattttacaatttcctacat 27221656  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||    ||||||||||||||||||||||||  |||||||||| |  ||||||| || | | ||||| ||||  ||| ||| ||||||    
T  27221657 cgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctatactctttcgacctaaaagtaaagtcccga 27221756  T
Q  419 ttttgacaaccttgt 433  Q
    |||||| || |||||    
T  27221757 ttttgaaaatcttgt 27221771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 431
Target Start/End: Complemental strand, 24989708 - 24989549
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttt 369  Q
    ||||||||||||| ||||||||||||| ||| ||||  ||||| ||||||||||||  || |||  || |||||||||||||||||||||||   |||||    
T  24989708 ttttggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcctt-agtaaaatccttcgattttgattgccatttt 24989610  T
Q  370 acgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    |||| |  |||||||  | ||||||||| ||| | ||| ||| |||||||||||||||||||    
T  24989609 acgagtcccgattttgttattccctttcgacc-taaagtaaagtcccgattttgacaacctt 24989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 349 - 433
Target Start/End: Complemental strand, 10285759 - 10285676
Alignment:
Q  349 ttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgt 433  Q
    |||||||||||||  |||||||||||| | ||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||    
T  10285759 ttcgattttgattgcgattttacgattgttgatttttctcttctctttcgacc-tgaagtaaaatcccgattttgacaaccttgt 10285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 8329897 - 8329823
Alignment:
Q  287 gattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgatt 361  Q
    |||||||||| ||| |||||||||||||||||| |||||  || ||||||||||||||||||||| |||||||||    
T  8329897 gattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgatt 8329823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 8254096 - 8254016
Alignment:
Q  227 atgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| |||||||    
T  8254096 atgactatatgcaatttataacatatatttaacattatttttgttttggtagaatc-ctcgattttgattgcgattttacga 8254016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 287 - 358
Target Start/End: Complemental strand, 8346384 - 8346313
Alignment:
Q  287 gattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttg 358  Q
    |||||||||| |||  ||||||||||||||||| |||||  || ||||||||||||||||||||||||||||    
T  8346384 gattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttg 8346313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 7307141 - 7307232
Alignment:
Q  218 gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||| |||| |||||||| ||||||||| |||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| ||||||||||    
T  7307141 gagtcatttacgactatatgcaatttata-catatatttaacattatttttgttttggtagaatc-ttcgattttgattgcgattttacgattt 7307232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 8629707 - 8629635
Alignment:
Q  238 caatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||  ||| |||||||| ||| ||||||||||    
T  8629707 caatttataacatatatttagcattatttttgttttggtagaatc-ctcggttttgattgcgattttacgattt 8629635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 432
Target Start/End: Complemental strand, 1981186 - 1981099
Alignment:
Q  344 aatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||||||||||||||||| |||||||||| || | ||||||||  |||||||| | ||||||| ||| |||||||||||| |||||||    
T  1981186 aatccttcgattttgattacgattttacgagttccaatttttctaatccctttcga-cttgaagtaaagtcccgattttgataaccttg 1981099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 26617440 - 26617363
Alignment:
Q  240 atttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatc 319  Q
    ||||||||||||||||||| ||||||| | |||  |||||||||||||||||||||| ||| ||||| |||| |||||||    
T  26617440 atttataacatatatttagtattattttttttt--gtaaaatcaatcgattttgattgcgattttacaattttttatatc 26617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 361
Target Start/End: Original strand, 6916946 - 6917063
Alignment:
Q  242 ttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagt 341  Q
    ||||||||||||||||  || |||| | | ||||||||||  ||||||||||||| | | ||||  ||||||||||||||||  | || |||||||||||    
T  6916946 ttataacatatatttaatat-atttttttgttggtaaaattcatcgattttgattgcaattttataatttcttatatcgatttatgaa-agtagttgagt 6917043  T
Q  342 aaaatccttcgattttgatt 361  Q
    |||||||||| |||||||||    
T  6917044 aaaatccttcaattttgatt 6917063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 432
Target Start/End: Original strand, 11325173 - 11325333
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttt 369  Q
    ||||||||||||| |||||||||||||   | ||||| |||||| ||||| ||| |  |  ||||||||||||||| ||||  | |||| ||  ||||||    
T  11325173 ttttggtaaaatccatcgattttgattgtaattttacaatttct-atatcaattttacagaagtagttgagtaaaacccttgaaatttggttgcgatttt 11325271  T
Q  370 acgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||| |||||||| |||||| ||||  | | |||||||| ||||| |||||||||||||||    
T  11325272 acgattgtcgattttgctcttctcttttga-cgtgaagcaagatcccaattttgacaaccttg 11325333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 17741886 - 17741952
Alignment:
Q  318 tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttt 384  Q
    |||||||| ||| ||||||| ||||||||||||| |||||||||   ||||||||||||||||||||    
T  17741886 tcgattctaaaaaagtagttaagtaaaatccttcaattttgattgcaattttacgattttcgatttt 17741952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 429
Target Start/End: Original strand, 8304346 - 8304438
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacc 429  Q
    |||||||||||||||||||||||||| ||||||||||| |  ||||||| ||  || ||||| | ||||||| ||| || ||||||||||||||    
T  8304346 ttgagtaaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcga-cttgaagtaaagtctcgattttgacaacc 8304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 370
Target Start/End: Original strand, 11326484 - 11326577
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttta 370  Q
    |||||| ||||||||||||| ||| ||||| ||||| ||||| |||||   || |||  ||||||||||| |||| ||||||||| ||||||||    
T  11326484 aaaatctatcgattttgattgcgattttacaatttcctatattgattccacaaaagtccttgagtaaaatacttcaattttgattgtgatttta 11326577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 8304220 - 8304293
Alignment:
Q  224 tttatgactatatacaatttataacatata--tttagcattatttctgttttggtaaaatcaatcgattttgatt 296  Q
    ||||||||||||| ||||||||||||||||  ||||  ||||||| |||||||||| ||||  ||||||||||||    
T  8304220 tttatgactatatgcaatttataacatatatttttaaaattatttttgttttggtagaatc-ctcgattttgatt 8304293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 24990051 - 24990012
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcatta 263  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  24990051 tttatgactatatactatttataacatatatttagtatta 24990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 2432556 - 2432470
Alignment:
Q  7 gattattctataagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtggctaaacgaatttgactaagtcaactatt 93  Q
    ||||| ||| ||| |||||||||||||||||||||| ||||||| |||||   ||||||  ||| ||| | ||| ||||||||||||    
T  2432556 gattactctttaatatgaaagtaaatatccttagacaaaatcaagttaaaatgatgtggtcaaaagaagtagaccaagtcaactatt 2432470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 26340341 - 26340279
Alignment:
Q  249 atatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||| |||||||||||| |||||||||| |||  |||||||||||||  || ||||||||||    
T  26340341 atatagttagcattatttttgttttggtagaatttatcgattttgattgtgattttacgattt 26340279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 27221511 - 27221556
Alignment:
Q  272 ttggtaaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||| |||||| ||||||||||||| ||| ||||||||||||||||    
T  27221511 ttggcaaaatccatcgattttgattgcgattttacgatttcttata 27221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 48621529 - 48621476
Alignment:
Q  331 agtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttt 384  Q
    ||||||||||||||||| ||| ||||  |||  |||||||||||||||||||||    
T  48621529 agtagttgagtaaaatctttcaatttcaattgcgattttacgattttcgatttt 48621476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 2434642 - 2434551
Alignment:
Q  7 gattattctataagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtgg-ctaaacgaatttgactaagtcaactattagtat 98  Q
    ||||| ||| ||| || ||||||||||||||||||| ||||||| |||||   |||||| ||||| ||| | ||| |||||||||||||||||    
T  2434642 gattactctttaatatcaaagtaaatatccttagacaaaatcaagttaaaatgatgtggtctaaa-gaagtagaccaagtcaactattagtat 2434551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 17811445 - 17811485
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  17811445 aaaatcgatcgattttgattgcgattttacgatttcttata 17811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 3e-71; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 192 - 432
Target Start/End: Complemental strand, 6346968 - 6346729
Alignment:
Q  192 tataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattt 291  Q
    ||||| |||||| |||||||||| | ||||| ||||||  |||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||||||    
T  6346968 tataactattttctagactttaacctgagtcatttatgcatatatacaatttataacatatatttatcattatttttgttttggtgaaatccatcgattt 6346869  T
Q  292 tgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttc 391  Q
    ||||| ||| ||||| |||||||||||  |||||  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  6346868 tgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattttcgattttgctcttc 6346769  T
Q  392 cctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||| ||| ||||||||| | ||||||||||||||||||    
T  6346768 cctttcgacc-tgaagcaaatttccgattttgacaaccttg 6346729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 183 - 395
Target Start/End: Complemental strand, 8011158 - 8010946
Alignment:
Q  183 tcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    ||||||||||||||||||||||| ||||||||||  | || ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  8011158 tcatttatgtataagtattttgtggactttaaactaattcatttataattatatacaatttataacatatatttagcattatttttgttttggtaaaata 8011059  T
Q  283 aatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatt 382  Q
     ||||||||||||| ||| ||||| ||||||||||||||||||  || | |||||||||||||||||||||||||||||  |||||||||| |  |||||    
T  8011058 catcgattttgattgcgattttacaatttcttatatcgattctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgatt 8010959  T
Q  383 tttctcttccctt 395  Q
    || || |||||||    
T  8010958 ttgctattccctt 8010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 192 - 436
Target Start/End: Original strand, 7045058 - 7045303
Alignment:
Q  192 tataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattt 291  Q
    ||||||||| || | |||||||||| ||||| ||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||| ||| || |||||    
T  7045058 tataagtatcttatcgactttaaactgagtcatttatcactatatacaaattataacatatatttaacattatttttgttttggtaagatccatagattt 7045157  T
Q  292 tgattacgaatttacgatttcttata--tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctct 389  Q
    |||||   | ||||||||||||||||  ||||||||| || || ||||||||||||||||||||||||||||  ||||||| |||||| |||||| ||||    
T  7045158 tgattgatattttacgatttcttatatctcgattcttgaaaagcagttgagtaaaatccttcgattttgattgcgattttatgatttttgattttgctct 7045257  T
Q  390 tccctttcaaccttgaagcaaaatcccgattttgacaaccttgttgt 436  Q
    |||||||| ||| ||||| ||||| || |||||||||||||||||||    
T  7045258 tccctttcgacc-tgaagtaaaattcctattttgacaaccttgttgt 7045303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 179 - 402
Target Start/End: Complemental strand, 9149749 - 9149525
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||||||||| | |||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||| | |||||||||    
T  9149749 ttagtcatttatgtataagtattttttggactttaagctgagtcatttataactatatacaatttataacatatatttagcattatttttcttttggtaa 9149650  T
Q  279 aatcaatcgattttgattacg-aatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
    |||| ||| ||||||||| ||   ||||||||||||||||||||||||   | ||||||||||||||||||||| |||||||||   ||||||| |||||    
T  9149649 aatctatcaattttgattgcgttttttacgatttcttatatcgattctacgaaagtagttgagtaaaatccttcaattttgattggaattttacaatttt 9149550  T
Q  378 cgatttttctcttccctttcaacct 402  Q
     |||||  ||||| |||||| ||||    
T  9149549 agatttcgctctttcctttcgacct 9149525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 179 - 370
Target Start/End: Original strand, 7044866 - 7045057
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||||||||||||| |||| |||||||||| ||||| ||||| ||||||||||| |||||||| || |||| |||||||| |||||||||||    
T  7044866 ttagtcatttatgtataagtatcttgtcgactttaaactgagtcatttatcactatatacaaattataacacatgtttaacattatttttgttttggtaa 7044965  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttta 370  Q
    |||| |||||||||||||   | |||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||  |||||||    
T  7044966 aatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgattgcgatttta 7045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 224 - 432
Target Start/End: Original strand, 24719723 - 24719923
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||   ||||||||||||| ||| ||||||||||||||||||||||    
T  24719723 tttatgactatatacaatttataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgatt 24719822  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||| | |||||||||||||||||| |||||  |||       ||||||||||| |||||||||||| ||| |||||||||||| ||||||||    
T  24719823 ctacaaaagtaatcgagtaaaatccttcgattgtgatttcgat-------ttttcgattttgctcttccctttcgacc-tgaagcaaaatctcgattttg 24719914  T
Q  424 acaaccttg 432  Q
    |||||||||    
T  24719915 acaaccttg 24719923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 182 - 432
Target Start/End: Original strand, 7452616 - 7452860
Alignment:
Q  182 gtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaat 281  Q
    ||||||| ||||||||| |||||| || ||||||| ||||| |||    ||||||| ||||||||||||||||| |||||||||| |||||||  |||||    
T  7452616 gtcatttttgtataagtgttttgtggaatttaaactgagtcattt----ctatatagaatttataacatatattaagcattatttttgttttgacaaaat 7452711  T
Q  282 caatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgat 381  Q
    | |||||||||  ||  |  ||||||||||| ||||| ||||||  || |||||||||||||| ||||||||||||||||  ||||||||||||||| |     
T  7452712 ccatcgattttagttgtgcttttacgatttcgtatattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacgattttcaac 7452810  T
Q  382 ttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||||||||||||| ||| |||||||||||||  |||||||||||||||    
T  7452811 ttttctcttccctttcgacc-tgaagcaaaatcctaattttgacaaccttg 7452860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 233 - 432
Target Start/End: Original strand, 10394768 - 10394965
Alignment:
Q  233 atatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatag 332  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||| ||||   | ||||||||||| |||| |||||||  || ||    
T  10394768 atatacaatttataacatatatttaccattatttttgttttggtaatatccatcgattt-gattgtaattttacgatttcctataccgattctacaaaag 10394866  T
Q  333 tagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||||||||| ||||||||||||||||  |||||||||||||| |||||| ||||| | |||||| ||||||||||||| || |||||||||||||||    
T  10394867 tagttgagtaaagtccttcgattttgattgcgattttacgatttttgattttgctctttcttttcaa-cttgaagcaaaattccaattttgacaaccttg 10394965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 183 - 433
Target Start/End: Complemental strand, 18459638 - 18459404
Alignment:
Q  183 tcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || |||||||||||||||| ||| || ||||||||  ||| |    
T  18459638 tcatttatgtataagtattttgtggactttaaaccgagtcatttatgactatatacagttcataacatatatttagcgttacttttgttttgg-caaagc 18459540  T
Q  283 aatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatt 382  Q
     |||||||||              ||||||||||||| |||||  || | ||||| ||| ||||||||||||||| |||  |||||||||||| ||||||    
T  18459539 catcgatttt--------------gatttcttatatcaattctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgattgtcgatt 18459454  T
Q  383 tttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgt 433  Q
    || ||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  18459453 ttgctctttcctttcaacc-tgaagcaaaatctcgattttgacaaccttgt 18459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 183 - 325
Target Start/End: Original strand, 4156960 - 4157101
Alignment:
Q  183 tcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    |||||||||||||||||||||||  |||||||||||| || ||||| ||||||||||||| |||||||||||| | |||||||| |||||| ||||||||    
T  4156960 tcatttatgtataagtattttgtgaactttaaaccgaatcatttatcactatatacaatt-ataacatatattcaacattatttttgttttagtaaaatc 4157058  T
Q  283 aatcgattttgattacgaatttacgatttcttatatcgattct 325  Q
     ||||||||||||| ||| ||||||||||||| ||| ||||||    
T  4157059 catcgattttgattgcgattttacgatttcttgtattgattct 4157101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 19888575 - 19888665
Alignment:
Q  8 attattctataagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtggctaaacgaatttgactaagtcaactattagtat 98  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19888575 attactctttaagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtggctaaacgaattagactaagtcaactattagtat 19888665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 36120968 - 36121177
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| |||||||| |||||||||| ||||||  |  |||||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  36120968 agtcatttatgactatataccatttataaaatatatttagtattattatt--tttggtaaaatccatcgattttgattgcgattttacaatttcctatat 36121065  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||| ||  || |||  |||||||||||| |||||||||||||  |||||||||| |  |||||   || ||||||||||| ||||||| |||  |||||    
T  36121066 cgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacgagtcccgattaagctattccctttcaa-cttgaagtaaagacccga 36121164  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  36121165 ttttgacaacctt 36121177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 219 - 375
Target Start/End: Original strand, 10143043 - 10143199
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| | |||||| |||||||||| ||||||| | ||||| ||||||| ||| ||||||||| ||| ||||| || ||||||||    
T  10143043 agtcatttatgactatataccaattataatatatatttagtattattttttttttgataaaatccatcaattttgattgcgattttacaatctcttatat 10143142  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatt 375  Q
    |||||||  || | ||||||| |||||||||||||||||||||  ||||||||||||    
T  10143143 cgattctacaaaattagttgaataaaatccttcgattttgattgcgattttacgatt 10143199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 9770262 - 9770467
Alignment:
Q  225 ttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattc 324  Q
    |||||||||||||| ||| ||||||||||||||| |||| || | ||| ||||||||  ||||||||||||| ||| ||||| ||||  |||||||||||    
T  9770262 ttatgactatataccattcataacatatatttagtattaatttt-tttgggtaaaattcatcgattttgattgcgattttacaatttgctatatcgattc 9770360  T
Q  325 ttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
    |  || ||   ||||||||||||||||||||||||||  |||||||||| |  ||||||| || ||||||||| ||| | ||| ||| ||||||||||||    
T  9770361 tacaaaagaccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgacc-taaagtaaagtcccgattttga 9770459  T
Q  425 caaccttg 432  Q
    ||||||||    
T  9770460 caaccttg 9770467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 402
Target Start/End: Complemental strand, 5361948 - 5361768
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||| ||||||| |||| ||||||||||||||   ||||| | ||||||| ||||| ||||| ||||||| ||| ||||||||||| |||||    
T  5361948 agtcatttatgattatataccatttttaacatatatttag---tatttttcttttggtcaaatccatcgactttgattgcgattttacgatttcatatat 5361852  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaacct 402  Q
    |||||||  || ||||||||||||||| |||||||||||| ||   ||||||||||| || ||||| |||||| ||||| ||||    
T  5361851 cgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacgattgtctattttgctcttctctttcgacct 5361768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 17466223 - 17466433
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||  ||||||| | | ||| ||||||| ||||||||||||| | | ||||| |||||||||||    
T  17466223 agtcatttatgactatataccatttataacatatatttaatattatttttttgttg-taaaatccatcgattttgattgcaattttacaatttcttatat 17466321  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    ||||||   || |||||||||||| |||| ||| |||||| ||   ||||||||||| |||||||| |||  | ||||| | ||||||||||||| ||      
T  17466322 cgattccacaaaagtagttgagtataatctttcaattttgtttgcaattttacgattgtcgattttgctcagctctttcga-cttgaagcaaaatgccag 17466420  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  17466421 ttttgacaacctt 17466433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 23064946 - 23064737
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||  ||||  ||||||||||||||||||| ||||||  | |||||||||||||| |||||||||||| | | ||||| ||||| |||||    
T  23064946 agtcatttatgaccctatatcatttataacatatatttagtattattatt-ttttggtaaaatcattcgattttgattgcaattttacaatttcctatat 23064848  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  |||| ||||||||||| |||||||||  |||||||||| || ||||||   | ||||||||| ||| ||||| ||| ||||||    
T  23064847 cgattctacaaaagtccttgaataaaatccttcaattttgattgcgattttacgagttccgatttcgttattccctttcgacc-tgaagtaaagtcccga 23064749  T
Q  419 ttttgacaacct 430  Q
    ||||||||||||    
T  23064748 ttttgacaacct 23064737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 7825153 - 7825239
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatt 265  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||||    
T  7825153 ttagtcatttatgtataagtattttgtggactttaaactgagtcatttatgactatatacaatttataacttgtatttagcattatt 7825239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 219 - 397
Target Start/End: Complemental strand, 9911396 - 9911219
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| |||||||||||||||| || ||||||  | |||||||||| || ||||||||||||| ||| ||||| |||||||||||    
T  9911396 agtcatttatgactatataccatttataacatatattaagtattattatt-ttttggtaaagtccatcgattttgattgcgattttacaatttcttatat 9911298  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttc 397  Q
    |||||||  || |||  | ||||||||||||||| |||| |||  |||||||||| |  ||||||| || |||||||||    
T  9911297 cgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacgagtcccgattttactattccctttc 9911219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 183 - 432
Target Start/End: Original strand, 55476082 - 55476343
Alignment:
Q  183 tcatttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaat 281  Q
    ||||||||||||| |||||||||  ||||| |||   |||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||    
T  55476082 tcatttatgtatatgtattttgtgtactttgaactttagtcatttatgactatatgcaatttataacatatattttgcattatttttgttttggtagaat 55476181  T
Q  282 caatcgattttgattacgaatttacga-------------tttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattt 368  Q
    |  |||||||||||| ||| |||||||             | |||||||||||||||  || |||  ||||||||||||||||||||||||||  |||||    
T  55476182 c-ctcgattttgattgcgattttacgagttccgactttgctatcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattt 55476280  T
Q  369 tacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||| |  |||||||  |  |||||||| | ||||||| ||| |||||||||||| |||||||    
T  55476281 tacgagtaccgattttattactccctttcga-cttgaagtaaagtcccgattttgataaccttg 55476343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 31889706 - 31889616
Alignment:
Q  8 attattctataagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtggctaaacgaatttgactaagtcaactattagtat 98  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||| ||||||||||||||    
T  31889706 attactctttaagatgaaagtaaatatccttagactaaatcaatttaaaataatgtggctaaaagaattagactaaatcaactattagtat 31889616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 432
Target Start/End: Complemental strand, 8743803 - 8743539
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||| ||||||||||||||||||||||   ||||| |||||||||||  |||||||| |||||||||||| |||||||| |||||| ||||    
T  8743803 agtcatttatgtacaagtattttgtagactttaaactttgagtcatttatgactatgaacaatttaaaacatatatttaacattatttttgtttt-gtaa 8743705  T
Q  279 aatcaatcgattttgattacgaatttacgattt-------------cttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatga 365  Q
    ||||||||  |||| ||| |||  |||||||||             | |||||||||| |  ||  |||||||||||||||| |||||||||||||| ||    
T  8743704 aatcaatcagttttaattgcgatattacgattttcgattttactagcctatatcgattatacaaatgtagttgagtaaaatctttcgattttgattacga 8743605  T
Q  366 ttttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    | |||| ||||| |||||| ||  || | ||| |||  ||||| |||||| ||||||||||||||||    
T  8743604 tgttactatttttgattttgctagtctcattcgacc-agaagctaaatccggattttgacaaccttg 8743539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 219 - 373
Target Start/End: Original strand, 5375808 - 5375962
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||||||| |||||  ||||||||||||||||||| |||| || | ||| ||||||||| |||||||||||||  || ||||| ||||| |||||    
T  5375808 agtcatttatgaccatatatcatttataacatatatttagtattaattttttttgggtaaaatccatcgattttgattgtgattttacaatttcctatat 5375907  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacga 373  Q
     ||||||  |  |||  ||||||||||||||||||||||||||  ||||||||||    
T  5375908 agattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacga 5375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 212 - 432
Target Start/End: Original strand, 8889365 - 8889571
Alignment:
Q  212 taaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    |||||| |||| ||||||||||||||| |||||||| |||||||||| ||| |||   | ||||||||||  ||||||||||||| ||| ||||| ||||    
T  8889365 taaaccaagtcgtttatgactatataccatttataatatatatttagtatttttt---tgttggtaaaattcatcgattttgattgcgattttacaattt 8889461  T
Q  312 cttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaa 411  Q
             |||||  || ||||||||||||| |||||||||||||| ||  |||||||| ||| || ||||| |||| | ||||| |||| ||||||||    
T  8889462 ---------attctacaaaagtagttgagtaagatccttcgattttggttgcgattttacaattgtcaattttgctct-ctctttcgacct-gaagcaaa 8889550  T
Q  412 atcccgattttgacaaccttg 432  Q
    |||||||||||||||||||||    
T  8889551 atcccgattttgacaaccttg 8889571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 431
Target Start/End: Original strand, 37240450 - 37240593
Alignment:
Q  288 attttgattacgaatttacgatttctt-atatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttc 386  Q
    |||||||||  || ||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||  |||||||||||| |||||||  |    
T  37240450 attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttagc 37240549  T
Q  387 tcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||| |||||  || ||||||||||  |  ||||||||||||||    
T  37240550 tcttctctttcgtcc-tgaagcaaaactctaattttgacaacctt 37240593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 192 - 402
Target Start/End: Complemental strand, 5943259 - 5943062
Alignment:
Q  192 tataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacat-atatttagcattatttctgttttggtaaaatcaatcgatt 290  Q
    ||||||||||||||  |||||||||   ||| |||||||||||| |  ||||||||||| ||||||| |||||||| | ||||||||||||| |||||||    
T  5943259 tataagtattttgtgcactttaaactttgtcatttatgactataaa--atttataacattatatttaacattatttttattttggtaaaatccatcgatt 5943162  T
Q  291 ttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctctt 390  Q
    ||            ||||||||||| | |||||||  || ||||||||||||||||||||| |||||  ||  |||||||||||||| |||||| |||||    
T  5943161 tt------------acgatttcttaaaccgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgatttttgattttgctctt 5943074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 7815750 - 7815819
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataac 248  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||    
T  7815750 ttagtcatttatgtataagtattatgtggactttaaactgagtcatttatgactatatacaatttataac 7815819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 7803199 - 7803263
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaattt 243  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  7803199 ttagtcatttatgtataagtattttgtggactttaaactgagtcatttatgactatatacaattt 7803263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 8409724 - 8409810
Alignment:
Q  218 gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaattta 305  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||||| ||||    
T  8409724 gagtcatttatgactatatgtaatttataacatatatttagcattatttttgttttggtagaatc-ctcgattttgattacgatttta 8409810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 4157269 - 4157377
Alignment:
Q  318 tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttac---gattttcgatttttctcttccctttcaaccttgaagcaaaatc 414  Q
    ||||||||  || ||||||||||||||||| |||||| ||||||  ||||||||   ||||||||||||| |||||||||||| | ||| ||||||||||    
T  4157269 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcga-cttaaagcaaaatc 4157367  T
Q  415 ccgattttga 424  Q
    ||||||||||    
T  4157368 ccgattttga 4157377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 4157556 - 4157664
Alignment:
Q  318 tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttac---gattttcgatttttctcttccctttcaaccttgaagcaaaatc 414  Q
    ||||||||  || ||||||||||||||||| |||||| ||||||  ||||||||   ||||||||||||| |||||||||||| | ||| ||||||||||    
T  4157556 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcga-cttaaagcaaaatc 4157654  T
Q  415 ccgattttga 424  Q
    ||||||||||    
T  4157655 ccgattttga 4157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 18403671 - 18403757
Alignment:
Q  218 gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaattta 305  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| ||||    
T  18403671 gagtcattcatgactatatacaatttataacatatatttaacattatttttgttttggtagaatc-ttcgattttgattgcgatttta 18403757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 22060755 - 22060668
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattattt 266  Q
    ||||||||||||||||||||||||| ||||| ||||   ||  | |||||||||| ||||||||||| ||||||||||||||||||||    
T  22060755 agtcatttatgtataagtattttgtggacttgaaactttgatacatttatgactacatacaatttattacatatatttagcattattt 22060668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 5846105 - 5846050
Alignment:
Q  218 gagtcttttatgactatatacaatttataacatatatttagcattatttctgtttt 273  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  5846105 gagtcatttatgacaatatacaatttataacatatatttagcattatttttgtttt 5846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 20812633 - 20812759
Alignment:
Q  182 gtcatttatgtataagtattttgtagactttaaac--cgagtcttttatgactatatacaatttataaca--tatatttagcattatttctgttttggta 277  Q
    ||||||||| |||||||||||||||||||| ||||   ||||| ||||||||||||| || ||||||| |  ||||||||||||||||| | ||||||||    
T  20812633 gtcatttatttataagtattttgtagacttgaaactttgagtcatttatgactatatgcactttataatatttatatttagcattattt-tcttttggta 20812731  T
Q  278 aaatcaatcgattttgattacgaattta 305  Q
     ||||  ||||| |||||| ||| ||||    
T  20812732 gaatccttcgatcttgattgcgatttta 20812759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 8020783 - 8020724
Alignment:
Q  223 ttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    |||| ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||    
T  8020783 ttttgtgactatatgcaatttataacatatatttaacattatttttgttttggtagaatc 8020724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 5884274 - 5884202
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgatt 296  Q
    |||||||| |||| ||||||||||||||  |||||||||| || |||||| |||||||| ||| |||||||||    
T  5884274 tttatgacaatatgcaatttataacatacttttagcattacttttgtttttgtaaaatccatctattttgatt 5884202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 13023714 - 13023758
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcatta 263  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||||    
T  13023714 agtcatttatgactatataccatttataacatatatttagtatta 13023758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 46664227 - 46664152
Alignment:
Q  352 gattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaac 428  Q
    ||||||||||  |||||| |||||||||||||| || || | |||| |||| ||||||||||||| |||||||||||    
T  46664227 gattttgattgcgattttccgattttcgattttgctatttcttttcgacct-gaagcaaaatcccaattttgacaac 46664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 9911447 - 9911402
Alignment:
Q  272 ttggtaaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||| |||||| ||||||||||||| ||| ||||||||||||||||    
T  9911447 ttggcaaaatccatcgattttgattgcgattttacgatttcttata 9911402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 13023667 - 13023708
Alignment:
Q  276 taaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    ||||||||||||||||||||| ||| |||||||||| |||||    
T  13023667 taaaatcaatcgattttgattgcgattttacgattttttata 13023708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 27527944 - 27527988
Alignment:
Q  222 cttttatgactatatacaatttataacatatatttagcattattt 266  Q
    |||||| |||||||| ||||||| |||||||| ||||||||||||    
T  27527944 cttttacgactatatgcaatttacaacatatagttagcattattt 27527988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 46664269 - 46664233
Alignment:
Q  240 atttataacatatatttagcattatttctgttttggt 276  Q
    |||||||| |||||||||||||||||| |||||||||    
T  46664269 atttataatatatatttagcattatttttgttttggt 46664233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 134; Significance: 2e-69; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 179 - 424
Target Start/End: Complemental strand, 8985 - 8741
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||  |||||||||| ||| ||  |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||    
T  8985 ttagtcatttacatataagtattgtgtggaaattaaactgagtcatttatgactatatacaacttataacatatatttagcattatctttgttttggtaa 8886  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| ||||||||||||| ||| ||||| | |||||||||| |||||  || |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  8885 aatccatcgattttgattgcgattttacaagttcttatatctattctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattttc 8786  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
    |||||| |||| || |||||||| | ||||||||||||||||||||    
T  8785 gattttgctctaccttttcaacc-taaagcaaaatcccgattttga 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 2e-66; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 179 - 431
Target Start/End: Complemental strand, 25539171 - 25538920
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25539171 ttagtcatttatttataagtattttgtggactttaaactgagtcatttatgactatatacaatatataacatatatttagcattatttctgttttggtaa 25539072  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| ||||||||||||| | | ||||| |||| |||||||||||||  || ||||||| ||||||||||||  |||||||||  ||||||||||    |    
T  25539071 aatctatcgattttgattgcaattttacaattttttatatcgattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgagaccc 25538972  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||||| ||||||||| ||| ||| | ||| | |||||||||||||||||    
T  25538971 gatttttctattccctttcgacc-tgatgtaaagtaccgattttgacaacctt 25538920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 181 - 431
Target Start/End: Original strand, 16766892 - 16767140
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaa 280  Q
    |||||||||||| ||||| |||||| |||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||| |||    
T  16766892 agtcatttatgt-taagttttttgtggactttaaactgagtcatttatgactgtatacaatttataacaaatatttagcattatttttgttttggt-aaa 16766989  T
Q  281 tcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacga-ttttcg 379  Q
    ||  | |||||||||| ||| ||||||||||||||||||||||||  || ||||||||||||||||||||| |||||||||  ||||||| || ||||||    
T  16766990 tcctttgattttgattgcgattttacgatttcttatatcgattctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgatttttcg 16767089  T
Q  380 atttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||| ||||||| |||  ||| ||||||||||| || || |||| ||||||    
T  16767090 attttgctcttcctttttgacc-tgaagcaaaattccaatgttgaaaacctt 16767140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 179 - 431
Target Start/End: Original strand, 8428328 - 8428576
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||||||||| |||||||| |||||   |||||||  |||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||     
T  8428328 ttagtcatttatgtataaatattttgtggactt---accgagtaatttatgactatatataatttataatatatagttagcattatttttgttttggtat 8428424  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||  ||||||||  ||| ||| |||||||||| | |||| ||||||  || | |||||||| ||||||||||||||||||||  |||||||  |||||     
T  8428425 aattcatcgatttgtattgcgattttacgatttttgatattgattctacaaaaatagttgagcaaaatccttcgattttgattgcgattttagaattttt 8428524  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||||    
T  8428525 gatttttctattccctttcgacc-taaagcaaaatcccgattttgacaacctt 8428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 180 - 397
Target Start/End: Original strand, 27406895 - 27407113
Alignment:
Q  180 tagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaa 279  Q
    |||||||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||||| ||||||| |||||||||||||||||| ||||||||| ||    
T  27406895 tagtcatttatgtatatgtattttgtggactttaaactgagtcatttattactatatacagtttataatatatatttagcattatttttgttttggtgaa 27406994  T
Q  280 atcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacga-ttttc 378  Q
    ||| ||| ||||||||| ||| |||| |||||||||||| |||| |  || |||||||||||||||| ||| ||||||||||  ||| |||||| |||||    
T  27406995 atccatcaattttgattgcgattttatgatttcttatattgattatccaaaagtagttgagtaaaattcttggattttgattgcgatattacgatttttc 27407094  T
Q  379 gatttttctcttccctttc 397  Q
    |||||| ||||||| ||||    
T  27407095 gattttgctcttccttttc 27407113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 432
Target Start/End: Original strand, 19245686 - 19245944
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggt 276  Q
    ||||||||||||| | ||||||||||| ||||||||||   ||||| |||||||||| || |||||| || |||||||||| |||||||| | |||||||    
T  19245686 ttagtcatttatgcaaaagtattttgtggactttaaactttgagtcatttatgactacatgcaatttctatcatatatttaacattatttttattttggt 19245785  T
Q  277 aaaatcaatcgattttgattacgaatttacgattt------cttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttta 370  Q
    | |||| |||||||| |||||||| ||| ||||||      | ||||||||||||  || ||||||| |||||||||||| ||||||||||  |||||||    
T  19245786 agaatccatcgattt-gattacgatttt-cgattttactatcctatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgatttta 19245883  T
Q  371 cgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  19245884 cgatttttgattttgctattccctttcaa-cttgaagcaaaatcccgattttgacaaccttg 19245944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 240 - 432
Target Start/End: Complemental strand, 13502638 - 13502448
Alignment:
Q  240 atttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttga 339  Q
    ||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||  || | |||||||    
T  13502638 atttataacatatatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttga 13502539  T
Q  340 gtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
     ||| ||||||| |||||||||| ||||||||||||||||||||| |||||||||||| | |||||| ||||||  | |||||||||||||||    
T  13502538 ctaatatccttcaattttgattacgattttacgattttcgattttactcttccctttcca-cttgaaacaaaat-tcaattttgacaaccttg 13502448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 19492035 - 19492168
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatt-tctgttttggta 277  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| | | ||||||||    
T  19492035 ttagtcatttatgtataagtattctgtggactttaaacagagttatttatgactatatacaatttataacatatatttagcattattattttttttggta 19492134  T
Q  278 aaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||| ||||||||||||||||  ||||||||||    
T  19492135 aaatccatcgattttgattacggttttacgattt 19492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 219 - 420
Target Start/End: Complemental strand, 35565939 - 35565740
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||    |||||||||||| |||||||||||||  || |||| ||||||||||||    
T  35565939 agtcatttatgactatatacaatttataacatatatttagtatttttt----tttggtaaaatccatcgattttgattgtgattttatgatttcttatat 35565844  T
Q  319 cgattcttaaatagtagttgag---taaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcc 415  Q
    |||||||  || ||||||||||   |||||||||||||||||  ||  |||||||| ||| |||||||| |||||| | ||| ||| ||| |||||||||    
T  35565843 cgattctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttacaattatcgattttgctcttctccttcgacc-tgaggcaaaatcc 35565745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 5395549 - 5395384
Alignment:
Q  179 ttagtcatttatgtataa-gtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggta 277  Q
    |||||||||||||||||| |||||| || |||||||||  | ||| ||||||||||||||||||||||||||||| || | |||||||| ||||||||||    
T  5395549 ttagtcatttatgtataaagtatttggtggactttaaattgggtcatttatgactatatacaatttataacatattttgaacattatttttgttttggta 5395450  T
Q  278 aaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaa 344  Q
    |||||  ||||||||||||   | |||| |||||||||||||||||| |||| |||| |||||||||    
T  5395449 aaatctttcgattttgattgtaattttaagatttcttatatcgattc-taaaaagtaattgagtaaa 5395384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 270 - 432
Target Start/End: Original strand, 20063917 - 20064078
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttt 369  Q
    ||||||||||||| |||||||||| || ||| ||||| ||||| ||||||||||||  || |||  ||||||||||| ||||||||||||||  ||||||    
T  20063917 ttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgatttt 20064016  T
Q  370 acgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||| | |||||||| || ||||||||||||| ||||| |||  |||||||||||||||||||    
T  20064017 acgagtctcgattttgctattccctttcaacc-tgaagtaaagccccgattttgacaaccttg 20064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 429
Target Start/End: Complemental strand, 15588835 - 15588632
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||| ||||||| ||||||  ||||||||||| |||||||   ||||||||||||| ||||||||||||| ||| ||||  |||||||||||    
T  15588835 agtcatttatgattatataccatttat--catatatttagtattattt---ttttggtaaaatccatcgattttgattgcgattttataatttcttatat 15588741  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||| ||   | |||| ||||||||||||||||||||||| ||  ||||||| |||| ||||||||||| ||| ||||| ||| |||||||||||| | |    
T  15588740 cgatcctacga-agtaattgagtaaaatccttcgattttggttgcgattttatgattgtcgatttttcttttctctttcgacc-tgaagcaaaatctcaa 15588643  T
Q  419 ttttgacaacc 429  Q
    | |||||||||    
T  15588642 tattgacaacc 15588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 41002117 - 41002244
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaa 279  Q
    ||||||||||||||| ||||||||| |||||| |||   |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |    
T  41002117 agtcatttatgtatatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtaga 41002216  T
Q  280 atcaatcgattttgattacgaatttacga 308  Q
    |||  |||||||||||||||| |||||||    
T  41002217 atc-ctcgattttgattacgattttacga 41002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 432
Target Start/End: Original strand, 974429 - 974694
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccg--agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||| ||||||||| |||||| |||    |||| ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||     
T  974429 agtcatttatgtatatgtattttgtggactttgaactttaagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtag 974528  T
Q  279 aatcaatcgattttgattacgaatttacga-------------tttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatga 365  Q
    ||||  |||||||||||| ||| |||||||             | || ||||||||||||  || |||  ||||||||||||||||||||||||||  ||    
T  974529 aatc-ctcgattttgattgcgattttacgagtcccgacttcgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcga 974627  T
Q  366 ttttacga-ttttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||||| ||| ||||||| ||  |||||||| | ||||||| ||| ||||||| |||| |||||||    
T  974628 ttttacgagtttccgattttgctactccctttcga-cttgaagtaaagtcccgatattgataaccttg 974694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 235 - 434
Target Start/End: Complemental strand, 19262285 - 19262088
Alignment:
Q  235 atacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagta 334  Q
    |||| |||||||||||||| |||| ||||||  | |||||||||| ||  |||||||||||| ||| ||||| ||||||||||||||||||  || |||     
T  19262285 ataccatttataacatatagttagtattattatt-ttttggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtc 19262187  T
Q  335 gttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgtt 434  Q
     |||||||||||| |||||||||||||  |||||||||| |  ||||||| || ||||| ||| | ||||||| ||| | ||||||| ||||||||||||    
T  19262186 cttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgctattcccattcga-cttgaagtaaagttccgatttcgacaaccttgtt 19262088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 1690713 - 1690509
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||||||||||||||||||| |||||||| |||||||||  ||||||  | ||||||||||||  ||||||||||||| ||| ||||||| |||||||||    
T  1690713 agtcttttatgactatataccatttataaaatatatttaatattattatt-ttttggtaaaatttatcgattttgattgcgattttacgaattcttatat 1690615  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagc-aaaatcccg 417  Q
    |||||    || ||||||| |||||| ||||||| |||||         || ||||| | |||||| |||||| ||||||||| |||||| |||||||||    
T  1690614 cgatttaacaaaagtagttcagtaaattccttcgcttttg--------gttgcgattgttgattttgctcttctctttcaacc-tgaagcaaaaatcccg 1690524  T
Q  418 attttgacaaccttg 432  Q
    |||||||||||||||    
T  1690523 attttgacaaccttg 1690509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 31023406 - 31023537
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||| ||||||||||||| || ||||| ||||  | |  ||||||||||| ||| |||||||||||||||||| |||||||| | |||||||||    
T  31023406 ttagtcatttttgtataagtatttggtggactt-aaactaattagtttatgactatttactatttataacatatatttaacattatttttattttggtaa 31023504  T
Q  279 aatcaatcgattttgattacgaatttacgattt 311  Q
    |||| ||||||||||||||||| |||| |||||    
T  31023505 aatccatcgattttgattacgattttatgattt 31023537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 432
Target Start/End: Complemental strand, 21869359 - 21869095
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccg--agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||| ||||||||| |||||| |||    |||  ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||     
T  21869359 agtcatttatgtatatgtattttgtggactttgaactttaagttatttatgactatatgcaatttataacatatatttagcataatttttgttttggtag 21869260  T
Q  279 aatcaatcgattttgattacgaatttacga-------------tttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatga 365  Q
    |||| |||||||||||||  || |||||||             | || ||||||||||||  || |||  |||| ||||||||||||||||| |||  ||    
T  21869259 aatc-atcgattttgattgggattttacgagtctcgattttgctatcatatatcgattctacaaaagtcattgaataaaatccttcgattttaattgcga 21869161  T
Q  366 ttttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||| || |  |||||||||| ||||||||| | ||||||| ||| ||||||||||||| ||||||    
T  21869160 ttttaagagtcccgatttttctattccctttcga-cttgaagtaaagtcccgattttgacgaccttg 21869095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 34841705 - 34841816
Alignment:
Q  200 ttttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacg 299  Q
    |||||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||  ||||||| ||||| | || |||| ||||||||||||| ||    
T  34841705 ttttgtggactttaaactgagttatttatgactatatacaatttataacatatatttattattatttttgtttggatagaatccatcgattttgattgcg 34841804  T
Q  300 aatttacgattt 311  Q
    | ||||||||||    
T  34841805 attttacgattt 34841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 179 - 384
Target Start/End: Original strand, 15627847 - 15628052
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||||||||||| |||||||||||||   |||||||||  |||| |||| ||| ||||| |||||| |||||||| ||| | || ||| | | ||| |||    
T  15627847 ttagtcatttatatataagtattttgcgcactttaaactaagtcatttacgacaatatataatttaaaacatatacttaaccttttttttttgttgataa 15627946  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| ||||||||| ||| | | |||||||| | |||| | || |||  || ||||||||||||||| |||||||||||||||   ||||||| ||||||    
T  15627947 aatccatcgattttaatttcaattttacgatgtattatgtagactctacaaaagtagttgagtaaaaaccttcgattttgatttccattttacaattttc 15628046  T
Q  379 gatttt 384  Q
    ||||||    
T  15628047 gatttt 15628052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 431
Target Start/End: Original strand, 30432981 - 30433169
Alignment:
Q  241 tttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgag 340  Q
    |||||||||||||||||| |||| || | ||  ||||||||| ||| ||||||||| ||| ||||| ||||| ||||||||||||  || |||  |||||    
T  30432981 tttataacatatatttagtattaatttt-ttggggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgag 30433079  T
Q  341 taaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||| |||||||||||||  ||||||| || |  |||||||||| || | |||| ||| ||||| ||  |||||||||||||||||||    
T  30433080 taaaatcattcgattttgattgcgattttatgagtcccgatttttctattgcttttcgacc-tgaagtaatgtcccgattttgacaacctt 30433169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 396
Target Start/End: Complemental strand, 31237962 - 31237785
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatattta-gcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||| ||||||| ||||||| |||||||||||||||| | | ||||||  | ||||||||||||| ||||||||||||| | | ||||| ||||  ||||    
T  31237962 agtcatttatgattatataccatttataacatatattcatgtattattatt-ttttggtaaaatccatcgattttgattgcaattttacaattttctata 31237864  T
Q  318 tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt 396  Q
    |||||| |  || |||  ||||||||||||||||||| ||||||  |||||||||| |  ||||||| || ||||||||    
T  31237863 tcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattttacgagtcccgattttactattcccttt 31237785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 396
Target Start/End: Original strand, 1404927 - 1405103
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||||||||||| || |||||||||||||| |||| | ||||  | ||||  | ||||| ||||||||||||| | | ||||| ||||| |||||    
T  1404927 agtcatttatgactatacaccatttataacatatacttaggaatattattatttt-tttaaatccatcgattttgattgcaattttacaatttcctatat 1405025  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt 396  Q
    |||||||  || |||  ||||||||||||||||||||||||||  ||||||| || |  ||||||| || ||||||||    
T  1405026 cgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtaccgattttgctattcccttt 1405103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 432
Target Start/End: Original strand, 7301884 - 7302137
Alignment:
Q  186 tttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaa 284  Q
    |||||| ||| ||||||||| |||||| |||   |||| |||||||| |||| |||||||||||||||||||| |||||||| | |||||||| ||||      
T  7301884 tttatgcatatgtattttgtggactttgaactttagtcatttatgaccatatgcaatttataacatatatttaacattatttttattttggtagaatc-c 7301982  T
Q  285 tcgattttgattacgaatttacga--------tttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattt 376  Q
    |||||||||||| ||| ||| |||        |||  || |||||||||  || |||  ||||||||||||||||||||||||||   ||||||||| |     
T  7301983 tcgattttgattgcgattttgcgagtcccgactttgctacatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtc 7302082  T
Q  377 tcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
     ||||||| ||   ||| ||||| ||||||| ||| |||||||||||| |||||||    
T  7302083 ccgattttgctaccccccttcaa-cttgaagtaaagtcccgattttgataaccttg 7302137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 26251621 - 26251749
Alignment:
Q  185 atttatgtataagtattttgtagactttaaacc---gagtcttttatgactatatacaatttataacatatatttagcattatttctg-ttttggtaaaa 280  Q
    |||||| |||| ||||||||| ||||| ||||    ||||| ||||||||||||| |||||||||||||||||||| |||||||| || |||||||| ||    
T  26251621 atttatttataggtattttgtggacttgaaacttttgagtcatttatgactatatgcaatttataacatatatttaccattatttttgattttggtagaa 26251720  T
Q  281 tcaatcgattttgattacgaatttacgat 309  Q
    || | ||||||||||| | | ||||||||    
T  26251721 tctaccgattttgattgcaattttacgat 26251749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 34577986 - 34578108
Alignment:
Q  184 catttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    |||||||||||| ||||||||| |||||| |||   |||| |||||||||||   |||||||||||||||||||| |||||||| |||||||||| ||||    
T  34577986 catttatgtatatgtattttgtggactttgaactttagtcatttatgactatg--caatttataacatatatttaacattatttttgttttggtagaatc 34578083  T
Q  283 aatcgattttgattacgaatttacga 308  Q
      |||||||||||| ||| |||||||    
T  34578084 -ctcgattttgattgcgattttacga 34578108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 20034220 - 20034132
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    |||| ||||||| ||||| |||||||||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| |||||||    
T  20034220 agtcatttatgagtatatgcaatttataacatatatttaacattatttttgttttggtagaatc-ctcgattttgattgcgattttacga 20034132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 19519530 - 19519609
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||| |||||||||||||||||||||||||||||  ||||| ||| |||| ||| ||||||||| ||| ||||||||||    
T  19519530 tatatgcaatttataacatatatttagcattattttggtttttgtagaatctatcaattttgattgcgattttacgattt 19519609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 373
Target Start/End: Original strand, 36429997 - 36430145
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||||||||||  |||| |||||||||||||| ||| ||| | ||| ||||||||| ||||||||||||| | | ||||   ||| || ||||||||    
T  36429997 tttatgactatatatcatttctaacatatatttagtatt-tttttttttaggtaaaatccatcgattttgattgcaattttaattttttttttatcgatt 36430095  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacga 373  Q
    ||  || | |  |||||||| |||||||||||||||||  ||||||||||    
T  36430096 ctacaaaaattattgagtaatatccttcgattttgattgcgattttacga 36430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 383
Target Start/End: Original strand, 29661095 - 29661176
Alignment:
Q  302 tttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgattt 383  Q
    ||||||||||||||||||||| ||  || ||||||| | ||||| ||||||||||| |||  | ||||||||||||||||||    
T  29661095 tttacgatttcttatatcgatactacaaaagtagtttaataaaaaccttcgattttaattgcggttttacgattttcgattt 29661176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 20034091 - 20034004
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
    |||||||||||||||| |||||||||  |||||||||| | |||||||| ||  |||||||| | ||||||| ||| ||||||||||||    
T  20034091 ttgagtaaaatccttcaattttgattgcgattttacgagtctcgattttgctactccctttcga-cttgaagtaaagtcccgattttga 20034004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 31062316 - 31062411
Alignment:
Q  331 agtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaa 427  Q
    ||||||||||||||||| |||||||||||||   || |||| |||||  ||||| |||||||||||| | | |||||||||||||| ||||| ||||    
T  31062316 agtagttgagtaaaatctttcgattttgattgcaatgttacaattttttattttactcttccctttcga-catgaagcaaaatcccaattttaacaa 31062411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 27749787 - 27749713
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatata 253  Q
    |||||||||||| || |||||||||||||||| |||   ||||| |||||||||| || ||||||||||||||||    
T  27749787 agtcatttatgtgtatgtattttgtagactttgaactttgagtcatttatgactacatgcaatttataacatata 27749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 31578148 - 31578195
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattattt 266  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  31578148 agtcatttatgactatataccatttataacatatatttagtattattt 31578195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 421
Target Start/End: Complemental strand, 27523965 - 27523881
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattt 421  Q
    ||||||||||||||||||||||||||  |||||||||| |  ||||||| ||  |||||||| | ||||||| ||| |||||||||    
T  27523965 ttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcga-cttgaagtaaagtcccgattt 27523881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 13502987 - 13502943
Alignment:
Q  182 gtcatttatgtataagtattttgtagactttaaaccgagtctttt 226  Q
    |||||||||||||||||||||||| || ||||||| |||||||||    
T  13502987 gtcatttatgtataagtattttgtggagtttaaactgagtctttt 13502943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 34167543 - 34167611
Alignment:
Q  331 agtagttgagtaaaatccttcgatttt-gattatgattttacgattttcgatttttctcttccctttca 398  Q
    |||| |||||||||||| |||||| || ||||  ||||||||||||||||||||| || ||||||||||    
T  34167543 agtaattgagtaaaatcattcgatgttagattgcgattttacgattttcgattttgctattccctttca 34167611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 16767185 - 16767277
Alignment:
Q  339 agtaaaatccttcgattttgattatgattttacga-ttttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||||||||| |||||||||  ||||||| || ||||||||||| ||||||| |||  ||| ||||||||||| || || |||| ||||||    
T  16767185 agtaaaatccttcaattttgattgcgattttatgatttttcgattttgctcttcctttttgacc-tgaagcaaaattccaatgttgaaaacctt 16767277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 31238008 - 31237968
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  31238008 aaaatccatcgattttgattgcgattttacgatttcttata 31237968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 4e-61; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 179 - 434
Target Start/End: Original strand, 24648120 - 24648368
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  24648120 ttagtcatttatgtataagtattttgtggactttaaattgagtcatttatgactatatacaatttataatatatatttagcattatttatgttttagtaa 24648219  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| | |||||||||        || |||||| |||||| ||||||  || |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  24648220 aatccaccgattttga--------ttgcgattttttatattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttc 24648311  T
Q  379 gatttttctcttccctttcaacct-tgaagcaaaatcccgattttgacaaccttgtt 434  Q
    |||||| |||||||||||| ||||   ||  ||||||  ||||||||||||||||||    
T  24648312 gattttactcttccctttcgacctaaaaaaaaaaatcatgattttgacaaccttgtt 24648368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 179 - 431
Target Start/End: Complemental strand, 43005886 - 43005634
Alignment:
Q  179 ttagtcatttatgtataagtatttt-gtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggta 277  Q
    |||||||||||| | |||||||||| ||  | ||||| | ||||  ||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  43005886 ttagtcatttatatttaagtatttttgtgaaatttaatctgagtgatttatgagtgtatacaatttataacatatatttagcattatttttgttttggta 43005787  T
Q  278 aaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
     |||| ||||||||| ||| ||| ||||||||||| ||||||||||||  || || |||||||||||||| ||| |||||||||  |||||||| |||||    
T  43005786 caatccatcgattttaattgcgattttacgatttcctatatcgattctacaaaagaagttgagtaaaatctttcaattttgattgcgattttacaatttt 43005687  T
Q  378 cgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||| |||||| || |||||| | | | |||||||||||||||||||||||||||    
T  43005686 cgaattttctatttcctttcgatc-taaagcaaaatcccgattttgacaacctt 43005634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 199 - 431
Target Start/End: Original strand, 26021444 - 26021665
Alignment:
Q  199 attttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattac 298  Q
    |||||||  ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||  ||| |||      
T  26021444 attttgtccactttaatctgagtcatttatgactatatacaatttataacatatatttagcattattattgttttggtaaaatgcatcg--tttaattgt 26021541  T
Q  299 gaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttca 398  Q
    || |||||||||||||||||||||  |  |  ||||||||||||||||||| ||||||||||| |        ||||||||||||| |||||||||||      
T  26021542 gattttacgatttcttatatcgatgttacacaagtagttgagtaaaatcctacgattttgattgt--------gattttcgattttgctcttcccttttg 26021633  T
Q  399 accttgaagcaaaatcccgattttgacaacctt 431  Q
     || |||||||||||||||||||||||||||||    
T  26021634 gcc-tgaagcaaaatcccgattttgacaacctt 26021665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 230 - 431
Target Start/End: Complemental strand, 27340164 - 27339962
Alignment:
Q  230 actatatacaatttataacatatatttagcattatt--tctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattctta 327  Q
    ||||||||| |||| |||||||||||||| ||||||  | | |||| |||||||| ||||||||||||| ||| ||||  |||||||||||| |||||      
T  27340164 actatataccatttgtaacatatatttagtattattattatttttttgtaaaatctatcgattttgattgcgattttaatatttcttatatcaattctac 27340065  T
Q  328 aatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaa 427  Q
    || |||   |||||||||||||||||||||||||  ||||| ||||||||||||||| || ||||||||||| ||||||| ||| | |||||||||||||    
T  27340064 aaaagtccgtgagtaaaatccttcgattttgattgcgatttcacgattttcgattttgctattccctttcaa-cttgaagtaaagttccgattttgacaa 27339966  T
Q  428 cctt 431  Q
    ||||    
T  27339965 cctt 27339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 18843859 - 18844068
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||| ||||||| ||||||||||||||||||| |||| || | ||| ||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  18843859 agtcatttatgattatataccatttataacatatatttagtattaatttt-tttgggtaaaatccatcgattttgattgcgattttacaatttcctatat 18843957  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
     ||||||  || |||  ||||||||||| || |||||||||||  |||||||||| |  ||||||| || ||||||||| ||| ||||| ||| | ||||    
T  18843958 ggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtcccgattttgctattccctttcgacc-tgaagtaaagttccga 18844056  T
Q  419 ttttgacaacct 430  Q
    ||||||||||||    
T  18844057 ttttgacaacct 18844068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 43235012 - 43235223
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||||| ||||| || |||||||||||||| |||  ||||||  | ||||||||||||||||||||||||||| ||| ||||| |||| ||||||    
T  43235012 agtcatttatgtctataaaccatttataacatatacttactattatta-tcttttggtaaaatcaatcgattttgattgcgattttacaattttttatat 43235110  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  ||||||||||||||||||||||||||  ||||||| || |   |||||| || |||||||||   || |||| ||| |||| |    
T  43235111 cgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtactgattttgctattccctttc-gtctcgaagtaaagtcccaa 43235209  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  43235210 ttttgacaaccttg 43235223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 19579086 - 19579299
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||| ||| ||| ||||||||||||| | ||||||| | ||||||||||||| ||||||||||||| ||| ||||| ||||  ||||     
T  19579086 agtcatttatgactatttaccattcataacatatatttggtattattttttttttggtaaaatccatcgattttgattgcgattttacaattttctataa 19579185  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttc-tcttccctttcaaccttgaagcaaaatcccg 417  Q
    |||||||  || |||  |||||| |||||||||||||||||||  ||||||| || |  | ||||| | |  |||||||| ||| ||||| |||||||||    
T  19579186 cgattctacaaaagtccttgagtgaaatccttcgattttgattgcgattttatgagtcccaattttgcttactccctttcgacc-tgaagtaaaatcccg 19579284  T
Q  418 attttgacaaccttg 432  Q
    |||||||| ||||||    
T  19579285 attttgactaccttg 19579299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 181 - 397
Target Start/End: Original strand, 19377704 - 19377924
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccg--agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||| ||||||||| |||||| |||    |||| ||||||||||||| |||||||||||||||||||| |||||||| |||||| |||     
T  19377704 agtcatttatgtatatgtattttgtggactttgaactttaagtcatttatgactatatccaatttataacatatatttaacattatttttgtttttgtag 19377803  T
Q  279 aatcaat-cgatttt--ga-ttacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgat 374  Q
    ||||  |  ||||||  || || ||| |||||  | |||||||||||||||  || |||  |||||||||||||||||||||||||| | | ||||||||    
T  19377804 aatccttgtgattttacgagtttcgagtttac--tatcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtaaatttacgat 19377901  T
Q  375 tttcgatttttctcttccctttc 397  Q
    | |||||||| || |||||||||    
T  19377902 tctcgattttgctattccctttc 19377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 431
Target Start/End: Complemental strand, 41688645 - 41688441
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||| |  |||||||||||  ||||||||||||| ||| ||||| ||||  ||||||||||    
T  41688645 tttataactatataccattcataacatatatttagtattattttt--tttggtaaaattcatcgattttgattgcgattttacaattttctatatcgatt 41688548  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||  || |||||||||||||||||||| ||  ||||||| || |  ||||||| || |||||||||  || | ||| ||| |||||||||||    
T  41688547 ctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgctattccctttcgtcc-taaagtaaagtcccgattttg 41688449  T
Q  424 acaacctt 431  Q
    ||||||||    
T  41688448 acaacctt 41688441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 25635400 - 25635490
Alignment:
Q  8 attattctataagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtggctaaacgaatttgactaagtcaactattagtat 98  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||  |||||||| ||||||||||||    
T  25635400 attactctttaagatgaaagtaaatatccttagactaaatcaatttaaaataatgtggctaaaagaatcagactaagttaactattagtat 25635490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 219 - 368
Target Start/End: Complemental strand, 23172413 - 23172265
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| |||| |||||||||||||  |||| || | ||| ||||||||  ||||||||||||| ||| ||||| ||||| |||||    
T  23172413 agtcatttatgactatataccatttgtaacatatatttaatattaatttt-tttgggtaaaattcatcgattttgattgcgattttacaatttcctatat 23172315  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattt 368  Q
    |||||||  || |||  ||||||||||| ||||||||||||||| |||||    
T  23172314 cgattctacaaaagtctttgagtaaaattcttcgattttgattacgattt 23172265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 18051498 - 18051307
Alignment:
Q  239 aatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttg 338  Q
    |||||||||||||||||||| ||||||  | ||||||| ||||| |||||||||| || ||| ||||| ||||| ||||||||||||  || |||  ||     
T  18051498 aatttataacatatatttagtattattatt-ttttggttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagtccttc 18051400  T
Q  339 agtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    | |||||| ||| ||||||||||  |||| ||| | |  |||||||||| ||||||||| ||| | ||| ||||||||||||||||| ||||||    
T  18051399 aataaaattctttgattttgattgcgattctacaagtcccgatttttctattccctttcgacc-taaagtaaaatcccgattttgactaccttg 18051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 20321086 - 20321297
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||||||| |||||  ||||||||||||||||||  |||| || | | | ||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  20321086 agtcatttatgaccatatatcatttataacatatatttaatattaattttttctgggtaaaatccatcgattttgattgcgattttacaatttcctatat 20321185  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
     ||||||  || |||  || ||||||||||||| |||||||||  ||||||| || |  ||||||| || |||| |||  ||| ||||| ||| |||| |    
T  20321186 agattctacaaaagtccttcagtaaaatccttcaattttgattgcgattttatgagtcccgattttactattcctttttgacc-tgaagtaaagtcccaa 20321284  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  20321285 ttttgacaacctt 20321297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 30804032 - 30804124
Alignment:
Q  185 atttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggta 277  Q
    |||||||||||||||||||||||| || |||| ||||| |||||||||||||  |||| |||| | |||||||||||||||| ||||||||||    
T  30804032 atttatgtataagtattttgtagaattgaaactgagtcatttatgactatatgtaattcataataaatatttagcattatttttgttttggta 30804124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 41427510 - 41427775
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccg--agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||| ||||||||| |||||| |||    |||| ||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||     
T  41427510 agtcatttatgtatatgtattttgtggactttgaactttaagtcatttatgactatatgcaatttataatatatatttatcattatttttgttttggtag 41427609  T
Q  279 aatcaatcgattttgattacgaatttacgatt-------------tcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatga 365  Q
    ||||  |||||||||||| | | ||||| |||             || ||||||||||||  || |||  | ||||||||||||||||||||||||  ||    
T  41427610 aatc-ctcgattttgattgcaattttacaattccctattttgctatcctatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcga 41427708  T
Q  366 ttttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgt 433  Q
    |||||||| |  ||||||| ||  |||||||| | || |||| ||| || ||||||||||||||||||    
T  41427709 ttttacgagtcccgattttgctactccctttcga-ctcgaagtaaagtctcgattttgacaaccttgt 41427775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 383
Target Start/End: Complemental strand, 21059141 - 21058978
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||||||||||| || ||||||||||||||||||| ||  ||| | || | |||||||| ||||||||||||| ||| ||||  |||||||||||    
T  21059141 agtcatttatgactataaaccatttataacatatatttagtat--ttttttttgttgtaaaatccatcgattttgattgcgattttataatttcttatat 21059044  T
Q  319 cgattcttaaatagtagttgagt-aaaatccttcgattttgattatgattttacgattttcgattt 383  Q
      |||||  || ||||||| ||| |||||| |||||||||| ||  |||||||||||| |||||||    
T  21059043 aaattctacaaaagtagttaagtaaaaatctttcgattttggttgcgattttacgattgtcgattt 21058978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 431
Target Start/End: Complemental strand, 15052081 - 15051872
Alignment:
Q  227 atgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttc------ttatat-c 319  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| ||||||| |||      |  ||| |    
T  15052081 atgactatatgcaatttataacatatatttaacattatttttgttttggtagaatc-ctcgattttgattgcgattttacgagttccgactttgctatcc 15051983  T
Q  320 gattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgat 419  Q
     |||||  || |||  ||||||||||||||||||||||||||  |||||||||| |  ||||||| ||  ||| |||| | ||||||| ||| |||||||    
T  15051982 tattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccttttcga-cttgaagtaaagtcccgat 15051884  T
Q  420 tttgacaacctt 431  Q
    ||||| ||||||    
T  15051883 tttgataacctt 15051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 243 - 358
Target Start/End: Complemental strand, 38158224 - 38158111
Alignment:
Q  243 tataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagta 342  Q
    |||||||||||||||| ||||||| |  |||||||||||| ||| |||||||||  || ||||| |||||||| || ||||||  || | ||||||||||    
T  38158224 tataacatatatttagtattattttt--tttggtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagta 38158127  T
Q  343 aaatccttcgattttg 358  Q
    ||||||||||||||||    
T  38158126 aaatccttcgattttg 38158111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 9996959 - 9996892
Alignment:
Q  229 gactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgatt 296  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  9996959 gactataagcaatttataacatatattaagcattatttttgttttggtaaaatccatcgattttgatt 9996892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 361
Target Start/End: Original strand, 30799497 - 30799682
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaa 280  Q
    ||||||||||||||||||||||| |  |||| ||||  |||| |||||||| ||| | ||||||||||| |||||||||||| |||    ||| ||| ||    
T  30799497 agtcatttatgtataagtattttatgaacttgaaactaagtcatttatgaccatacataatttataacaaatatttagcattgttttgaattttgtacaa 30799596  T
Q  281 tcaatcgattttgattacgaatttacgatt------tcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgatt 361  Q
    || ||||||||||||| || |||| |||||      || ||||||||||||  || |||||||| ||||||||||||||||| ||||    
T  30799597 tccatcgattttgattgcg-attttcgatttttctatcatatatcgattctacaaaagtagttgtgtaaaatccttcgatttcgatt 30799682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 15446302 - 15446431
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||| ||||| ||||| ||||||||||   ||||| ||||||| | | | ||||| |||||||||||||| | |||||| ||||||| ||     
T  15446302 agtcatttatgtacaagtaatttgtggactttaaactttgagtcatttatgagtgtgtgcaattgataacatatatttatcgttatttttgttttgatag 15446401  T
Q  279 aatcaatcgattttgattacgaatttacga 308  Q
    |||| ||||||||||||| ||| |||||||    
T  15446402 aatccatcgattttgattgcgattttacga 15446431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 373
Target Start/End: Complemental strand, 19042404 - 19042260
Alignment:
Q  227 atgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattctt 326  Q
    ||||||||||||||||| |||||||||||||| |||| | || ||| | ||||||| ||| |||| |||| ||| ||||| ||||| ||||||||||||     
T  19042404 atgactatatacaatttctaacatatatttagtattaat-ctttttggataaaatccatcaattt-gattgcgattttacaatttcctatatcgattcta 19042307  T
Q  327 aaatagtagttgagtaaaatccttcgattttgattatgattttacga 373  Q
     || |||  || |||||||| |||||||||| ||| |||||||||||    
T  19042306 caaaagtccttaagtaaaattcttcgattttaattgtgattttacga 19042260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 22984839 - 22984752
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattattt 266  Q
    ||||||||||||||| ||||||||| || ||| |||   ||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  22984839 agtcatttatgtatatgtattttgtggaatttgaactttgagtcatctatgactatatgcaatttataacatatatttagcattattt 22984752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 432
Target Start/End: Complemental strand, 13341588 - 13341471
Alignment:
Q  314 tatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt-cgatttttctcttccctttcaaccttgaagcaaaa 412  Q
    ||||||||||||  || |||||| ||||||| |||||| |||| | ||  |||||||||||||| | |||||||| ||||||||| |  |||||||||||    
T  13341588 tatatcgattctacaaaagtagtcgagtaaa-tccttcaatttcgtttgcgattttacgatttttcaatttttctattccctttcgat-ttgaagcaaaa 13341491  T
Q  413 tcccgattttgacaaccttg 432  Q
    ||||||||||||||||||||    
T  13341490 tcccgattttgacaaccttg 13341471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 187865 - 187812
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggta 277  Q
    ||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  187865 tttattactatatgcaatttataacatatatttaacattatttttgttttggta 187812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 13349558 - 13349509
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccgagtcttttatga 230  Q
    ||||||||||||||||||||||||| ||||| |||| ||||| |||||||    
T  13349558 agtcatttatgtataagtattttgtggacttcaaactgagtcatttatga 13349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 431
Target Start/End: Original strand, 19979858 - 19979922
Alignment:
Q  366 ttttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    |||||||||| |||||||| |||||| ||||  |||| |||||||||||||||||||||| |||||    
T  19979858 ttttacgattgtcgattttgctcttctcttttgacct-gaagcaaaatcccgattttgaccacctt 19979922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 22984670 - 22984600
Alignment:
Q  336 ttgagtaaaatccttcgattttgatt--atg--attttacgattttcgatttttctcttccctttcaacct 402  Q
    ||||||||||||||||||||||||||  |||  |||||||||||| ||||||| || |||| |||||||||    
T  22984670 ttgagtaaaatccttcgattttgattgcatgcaattttacgatttacgattttgctattccttttcaacct 22984600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 17624856 - 17624902
Alignment:
Q  331 agtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
    ||||||||||||||||| || ||||||||||  ||||||||||||||    
T  17624856 agtagttgagtaaaatcttttgattttgattgcgattttacgatttt 17624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 19979743 - 19979781
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatattta 257  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  19979743 agtcatttatgactatataccatttataacatatattta 19979781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 29270235 - 29270303
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacat 250  Q
    ||||||||||||||||||||||||| |||||||    ||||  ||||||||||||| ||||||| |||||    
T  29270235 agtcatttatgtataagtattttgt-gactttactttgagtaatttatgactatatgcaatttaaaacat 29270303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 19579040 - 19579080
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  19579040 aaaatccatcgattttgattgcgactttacgatttcttata 19579080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 22645596 - 22645536
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt 396  Q
    ||||||||||||||||||||||||||   ||||||||| | || ||||| || ||||||||    
T  22645596 ttgagtaaaatccttcgattttgattgcaattttacgagtctcaattttgctattcccttt 22645536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 224 - 432
Target Start/End: Complemental strand, 29384297 - 29384086
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcatta----tttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatc 319  Q
    ||||||||||||||| ||||||||||||||||||| ||||    ||| | ||||||||||||| ||||||||||||| ||| |||||||||||||||||     
T  29384297 tttatgactatataccatttataacatatatttagtattagtatttttttttttggtaaaatccatcgattttgattgcgattttacgatttcttatatt 29384198  T
Q  320 gattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgat 419  Q
     |||||  || |||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||||  ||||| ||| |||||||||||||||||    
T  29384197 aattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttttctcttttctttcgacc-tgaagcaaaatcccgat 29384099  T
Q  420 tttgacaaccttg 432  Q
    |||||||||||||    
T  29384098 tttgacaaccttg 29384086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 231 - 432
Target Start/End: Complemental strand, 15761332 - 15761132
Alignment:
Q  231 ctatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaat 330  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||||| | ||||||||||||||||  ||     
T  15761332 ctatatacaatttataacatatatttagcattatttttgttttggtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaa 15761233  T
Q  331 agtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacct 430  Q
    |||| |||||||||||||||||||||  |||  |||||||||||| || ||||   |||||||||||   |||||||||||||||| ||||| |||||||    
T  15761232 agtaattgagtaaaatccttcgatttatattgcgattttacgattctcaatttcattcttccctttc-ggcttgaagcaaaatcccaattttaacaacct 15761134  T
Q  431 tg 432  Q
    ||    
T  15761133 tg 15761132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 224 - 432
Target Start/End: Original strand, 11879749 - 11879955
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||||||||||| ||||||||||||||||||| |||| || | ||||||||||||| ||||||||||| | ||| ||||| ||||  ||||||||||    
T  11879749 tttatgactatataccatttataacatatatttagtatta-ttattttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgatt 11879847  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||  ||  ||||||||||||||||||||||  |||||||||| || ||||||| || ||||||||  ||| ||||| |||||||||||||||    
T  11879848 ctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacc-tgaagtaaaatcccgattttg 11879946  T
Q  424 acaaccttg 432  Q
    |||||||||    
T  11879947 acaaccttg 11879955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 224 - 432
Target Start/End: Original strand, 11897165 - 11897371
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||||||||||| ||||||||||||||||||| |||| || | ||||||||||||| ||||||||||| | ||| ||||| ||||  ||||||||||    
T  11897165 tttatgactatataccatttataacatatatttagtatta-ttattttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgatt 11897263  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||  ||  ||||||||||||||||||||||  |||||||||| || ||||||| || ||||||||  ||| ||||| |||||||||||||||    
T  11897264 ctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacc-tgaagtaaaatcccgattttg 11897362  T
Q  424 acaaccttg 432  Q
    |||||||||    
T  11897363 acaaccttg 11897371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 270 - 431
Target Start/End: Original strand, 17647191 - 17647351
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttt 369  Q
    ||||| ||||||| ||||||||||||| ||| ||||| ||||||||||||||||||  || | |||||||||||||||||||||||||||||  ||||||    
T  17647191 ttttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgatttt 17647290  T
Q  370 acgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    | |||| |||||||| ||| || ||||| ||| |||||||||||||||||||| ||||||||    
T  17647291 atgattgtcgattttgctcatctctttcgacc-tgaagcaaaatcccgattttaacaacctt 17647351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 6810965 - 6811174
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||| ||||||||  ||||||||||||||||||| ||||||| |  |||||||||||| ||||||||||||| ||| ||| | |||||||||||    
T  6810965 agtcatttataactatatatcatttataacatatatttagtattattttt--tttggtaaaatccatcgattttgattgcgatttt-caatttcttatat 6811061  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    | |||||  || ||||||||| |||||| ||||||||||| ||  |||||||||||| |||||||| |||||| ||||| |  ||||| |||| | ||||    
T  6811062 ctattctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgattgtcgattttgctcttctctttcga-tttgaaacaaagttccga 6811160  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  6811161 ttttgacaaccttg 6811174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 187 - 432
Target Start/End: Complemental strand, 1018199 - 1017973
Alignment:
Q  187 ttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatc 286  Q
    ||||||||||||||||||| |||||||||  | ||| |||||||||||||| ||||||||||||| ||||| |||||||| | |||||||| |||| |||    
T  1018199 ttatgtataagtattttgttgactttaaagtgggtcatttatgactatatataatttataacatacatttaacattatttttattttggtagaatctatc 1018100  T
Q  287 gattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttc 386  Q
    |||||||||| ||  ||| |||| |||||||||||||||                 |||||||||||||||||| | ||||||| |||||| |||||  |    
T  1018099 gattttgattgcgcttttgcgatatcttatatcgattct-----------------aaatccttcgattttgatga-gattttatgatttttgatttcgc 1018018  T
Q  387 tcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||||| ||||||| |||||||||||||||||||| ||| |||||    
T  1018017 tcttccccttcaacc-tgaagcaaaatcccgatttttacatccttg 1017973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 252 - 428
Target Start/End: Complemental strand, 24056523 - 24056348
Alignment:
Q  252 tatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttc 351  Q
    |||||| |||||||| ||||||| ||||||| ||||||| ||||| ||| ||||  |||| |||||| ||||||  || | |||||||||||||||||||    
T  24056523 tatttaacattatttttgttttgataaaatctatcgattatgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttc 24056424  T
Q  352 gattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaac 428  Q
    |||||||||||  |||||| ||| ||| ||||| |||||||||||| ||| |||||||||||| || ||||||||||    
T  24056423 gattttgattaccattttatgatattcaattttgctcttccctttcgacc-tgaagcaaaatctcggttttgacaac 24056348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 185 - 347
Target Start/End: Original strand, 8582153 - 8582314
Alignment:
Q  185 atttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaa 284  Q
    |||||||||||| |||||||| ||||||||| || ||  ||||| ||||  |||||| ||||||||||||||| |||||||| ||||||||||||||  |    
T  8582153 atttatgtataaatattttgtggactttaaatcg-gtaatttataactaattacaatgtataacatatatttaacattatttatgttttggtaaaattca 8582251  T
Q  285 tcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatc 347  Q
    ||||||||||||   | |||||||||||||||||| |||||  || |||||||||||||||||    
T  8582252 tcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 214 - 427
Target Start/End: Original strand, 45403168 - 45403379
Alignment:
Q  214 aaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttct 313  Q
    |||| |||| |||||||  |||||| ||||||||||||||||||  ||||||  | ||||||||||||| ||||||||||||| ||  ||||| |||||     
T  45403168 aaccaagtcatttatgataatataccatttataacatatatttaatattattatttttttggtaaaatctatcgattttgattgcgt-tttacaatttcc 45403266  T
Q  314 tatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaat 413  Q
    ||||||||||||  || |||  || |||||||||||||||||||||||  |||||||||| | |||||||| || ||||||||| | | ||||  ||| |    
T  45403267 tatatcgattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctattccctttcga-cgtgaaataaagt 45403365  T
Q  414 cccgattttgacaa 427  Q
    ||||||||||||||    
T  45403366 cccgattttgacaa 45403379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 179 - 432
Target Start/End: Original strand, 17566213 - 17566453
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttct-gttttggta 277  Q
    |||||||||||| ||| ||||||||||  |||||||||  || | || ||||||||||||||||||||       ||||||||| ||| | |||||||||    
T  17566213 ttagtcatttatctatgagtattttgtgaactttaaactaagccattaatgactatatacaatttata-------tttagcatttttttttgttttggta 17566305  T
Q  278 aaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
    ||||| ||      ||||| ||| ||||| ||||||||||||  ||||  || |||||||||||||||| ||||||||||||||   |||||||||||||    
T  17566306 aaatccat------tgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgatttt 17566399  T
Q  378 cgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    | ||||| |||||||||||  ||| ||||||||||||| |||||| | |||||||    
T  17566400 caattttgctcttcccttttgacc-tgaagcaaaatcctgattttaaaaaccttg 17566453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 23142319 - 23142528
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||||||  |  ||||||||| || ||||||||||||| ||| ||||| |||||||||||    
T  23142319 agtcatttatgactatataccatttataacatatatttagtattattatt--tttggtaaagtccatcgattttgattgcgattttacaatttcttatat 23142416  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  |||| ||||||| ||||||||  |||  ||||||||||||  || |||| || ||||||||| |  |||||  ||| ||| ||    
T  23142417 cgattctacaaaagtttttgactaaaatcattcgatttaaattgcgattttacgattaccggttttgctattccctttcga-attgaaataaagtcctga 23142515  T
Q  419 ttttgacaacctt 431  Q
    |||||||||||||    
T  23142516 ttttgacaacctt 23142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 31424307 - 31424518
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagca---ttatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttctta 315  Q
    |||| ||||||||||||||| | ||||||||||||||||| |   || ||| | |||| |||||||| |||||||| |||| | | ||||| ||||||||    
T  31424307 agtcgtttatgactatataccaattataacatatatttagtatttttttttttttttttgtaaaatctatcgatttggattgcaattttactatttctta 31424406  T
Q  316 tatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcc 415  Q
    |||| ||||   || |||||||||||||||||||    ||||||||  |||||||||||| |||||||| ||| || ||||| ||| ||||| ||||||     
T  31424407 tatcaattccacaagagtagttgagtaaaatcct---gttttgattgcgattttacgattgtcgattttgctcatctctttcgacc-tgaagtaaaatct 31424502  T
Q  416 cgattttgacaacctt 431  Q
    ||||||||||||||||    
T  31424503 cgattttgacaacctt 31424518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 224 - 432
Target Start/End: Complemental strand, 22910182 - 22909978
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaa-atcaatcgattttgattacgaatttacgatttcttatatcgat 322  Q
    ||||||||||||||| |||||||||||||| |||| | || || |  |||| |||| |||| |||| ||||||| ||| |||||||||||||||||||||    
T  22910182 tttatgactatataccatttataacatatacttagtactactttt--tttgttaaacatca-tcgactttgattgcgattttacgatttcttatatcgat 22910086  T
Q  323 tcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgatttt 422  Q
    |||  || | ||||||| ||||||||||| |||| | ||  |||||||||||| ||||||||||||||| ||||| | | ||| | ||||| ||||||||    
T  22910085 tctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacgattgtcgatttttctcttctctttcga-catgatgtaaaat-ccgatttt 22909988  T
Q  423 gacaaccttg 432  Q
    ||||||||||    
T  22909987 gacaaccttg 22909978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 26575147 - 26575017
Alignment:
Q  183 tcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaa 280  Q
    ||||||||||||||||||||||| ||||||||||   ||||| ||||||| ||||| ||||||| ||||||| |||||||| | || |||||||||| ||    
T  26575147 tcatttatgtataagtattttgtggactttaaactttgagtcatttatgattatattcaatttaaaacatatttttagcatcaattttgttttggtagaa 26575048  T
Q  281 tcaatcgattttgattacgaatttacgattt 311  Q
    || ||||||||||||| | | ||||||||||    
T  26575047 tccatcgattttgattgctattttacgattt 26575017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 224 - 429
Target Start/End: Original strand, 5922198 - 5922400
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||||||||||| ||| ||||||||||||||| ||||  | | ||| ||||||||| |||||||  |||| ||| ||||| ||||| ||||||||||    
T  5922198 tttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatta-gattgcgattttacaatttcctatatcgatt 5922295  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc-gatttttctcttccctttcaaccttgaagcaaaatcccgatttt 422  Q
    ||  || |||  ||||||||||||||||||||||||||  |||| ||| || ||| |||||| || ||||||||| ||| ||||| ||| ||||||||||    
T  5922296 ctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacc-tgaagtaaagtcccgatttt 5922393  T
Q  423 gacaacc 429  Q
    |||||||    
T  5922394 gacaacc 5922400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 370
Target Start/End: Original strand, 15294814 - 15294963
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||||||||||| || |||| |||||||||||||| ||||||| |  || ||||||||| || ||||||| || ||| |||| ||||||||||||    
T  15294814 agtcatttatgactatacactatttgtaacatatatttagtattattttt--ttaggtaaaatccatggattttgcttgcgattttaagatttcttatat 15294911  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttta 370  Q
     ||||||  || |||  ||||||||||||||||||||||||||  |||||||    
T  15294912 ggattctacaaaagttcttgagtaaaatccttcgattttgattgcgatttta 15294963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 370
Target Start/End: Original strand, 15475183 - 15475332
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||||||||||| || |||| |||||||||||||| ||||||| |  || ||||||||| || ||||||| || ||| |||| ||||||||||||    
T  15475183 agtcatttatgactatacactatttgtaacatatatttagtattattttt--ttaggtaaaatccatggattttgcttgcgattttaagatttcttatat 15475280  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttta 370  Q
     ||||||  || |||  ||||||||||||||||||||||||||  |||||||    
T  15475281 ggattctacaaaagttcttgagtaaaatccttcgattttgattgcgatttta 15475332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 219 - 434
Target Start/End: Complemental strand, 7489268 - 7489055
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||  ||||||||||||||||||| |||| |  | |||  |||||||  ||||||||||||| ||| ||||| ||||  |||||    
T  7489268 agtcatttatgactatatatcatttataacatatatttagtattaatatt-tttgagtaaaattcatcgattttgattgcgattttacaattttctatat 7489170  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  |||||||||||||| |||||||||||  |||||||||| |    ||||| || || |||||| | ||||||| ||| ||| ||    
T  7489169 cgattctacaaaagtccttgagtaaaatcctccgattttgattgcgattttacgagtcctaattttgctatttcctttcga-cttgaagtaaagtcctga 7489071  T
Q  419 ttttgacaaccttgtt 434  Q
    ||||||||||||||||    
T  7489070 ttttgacaaccttgtt 7489055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 432
Target Start/End: Original strand, 15231835 - 15231976
Alignment:
Q  290 tttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctct 389  Q
    ||||||| ||| ||||| |||| |||||||||||||  || ||||||||||||||||| | |||||||  ||  |||||||||||| |||||||| ||||    
T  15231835 tttgattgcgattttacaattttttatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgattgtcgattttgctct 15231934  T
Q  390 tccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    || ||||| | |||||||||||||| ||| ||| |||||||||    
T  15231935 tctctttcga-cttgaagcaaaatctcgaatttaacaaccttg 15231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 224 - 396
Target Start/End: Complemental strand, 19704435 - 19704266
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||||||||||| |||| ||||||||||||||  || |||   ||| ||||||||| |||||||||||||  || |||| ||||||  |||||||||    
T  19704435 tttatgactatataccatttgtaacatatatttagtttttttt---tttaggtaaaatccatcgattttgattgtgattttaagatttcaaatatcgatt 19704339  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt 396  Q
    ||  || |||  ||||||||| ||||| ||||||||||  |||||||||| |  ||||||| || ||||||||    
T  19704338 ctacaacagtccttgagtaaattcctttgattttgattgcgattttacgagtcccgattttgctattcccttt 19704266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 3094228 - 3094020
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacga-atttacgatttcttata 317  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||| ||| | |||| |||||||| ||| ||||||||| |||  ||||| ||||||||||    
T  3094228 agtcatttatgactatataccatttataacatatatttagtattttttttttttttgtaaaatctatcaattttgattgcgatttttacaatttcttata 3094129  T
Q  318 tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccg 417  Q
    |     ||  || |||| |||||||||||||||| |||||  ||    |||||||||| |||||||| |||| | ||||| ||| | ||| ||||||  |    
T  3094128 t---gcctacaaaagtaattgagtaaaatccttcaatttttgttgcagttttacgattgtcgattttgctctactctttccacc-taaagtaaaatcttg 3094033  T
Q  418 attttgacaacct 430  Q
    |||||||||||||    
T  3094032 attttgacaacct 3094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 219 - 383
Target Start/End: Original strand, 32424476 - 32424641
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatat--ttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttat 316  Q
    |||| ||||||||||||||| |||||||||||||||  |||| |||| || | | | | ||||||| ||||||||| ||| ||| ||||| ||||| |||    
T  32424476 agtcatttatgactatataccatttataacatatatatttagtattaatttt-tctggataaaatctatcgatttttattgcgattttacaatttcctat 32424574  T
Q  317 atcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgattt 383  Q
     ||||||||  || | |  |||||||||||||||||||||| |||  |||||||||| || ||||||    
T  32424575 ctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacgagttccgattt 32424641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 40541858 - 40541772
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccg-agtcttttatgactatatacaatttataacatatatttagcattattt 266  Q
    ||||||||||||||| |||||||||  || || |||   |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  40541858 agtcatttatgtatacgtattttgtgtaccttgaactttagtcatttatgactatatgcaatttataacatatatttaacattattt 40541772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 16752159 - 16752208
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgtttt 273  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  16752159 tttatgactatatgcaatttataacatatatttaacattatttttgtttt 16752208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 431
Target Start/End: Complemental strand, 24414202 - 24414062
Alignment:
Q  290 tttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctct 389  Q
    |||||||| || ||||| ||||| ||||||||||||  || | |  ||||||||||||||||||||||||||  |||||||||| | |  ||||| || |    
T  24414202 tttgattaggattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgagtctaaattttgctat 24414103  T
Q  390 tccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    |||||||| | | ||||| ||| | || ||||||||||||||    
T  24414102 tccctttcga-catgaagtaaagttccaattttgacaacctt 24414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 27836449 - 27836351
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||| ||| | |  |||||||||| |||||||||||||  || ||||| ||||| |||||    
T  27836449 agtcatttatgactatataccatttataacatgtatttagtatt-tttttttgctggtaaaatccatcgattttgattgtgattttacaatttcctatat 27836351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 2040273 - 2040338
Alignment:
Q  242 ttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    |||||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| |||||||    
T  2040273 ttataacatatatttaacattatttttgttttggtagaatc-ctcgattttgattgcgattttacga 2040338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 422
Target Start/End: Original strand, 2040380 - 2040464
Alignment:
Q  337 tgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgatttt 422  Q
    |||||||||||||||||||||||||  |||||||||| || ||||||| ||  || ||||| | ||||||| ||| ||||||||||    
T  2040380 tgagtaaaatccttcgattttgattgcgattttacgagttccgattttgctactctctttcga-cttgaagtaaagtcccgatttt 2040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 26879737 - 26879810
Alignment:
Q  239 aatttataacatatatttagcatta-tttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||||||||||||||||||||| | ||| |||||| ||| |||| ||| ||||||||| ||| ||||||||||    
T  26879737 aatttataacatatatttagcatgattttttgtttttgtagaatccatcaattttgattgcgattttacgattt 26879810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 432
Target Start/End: Original strand, 26879778 - 26879865
Alignment:
Q  344 aatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||| || |||||||||  |||||||||||||| |||||| ||  |||||||||||| ||||  |||||| ||| |||||||||||||    
T  26879778 aatccatcaattttgattgcgattttacgatttttgattttgctgatccctttcaacc-tgaactaaaatcacgactttgacaaccttg 26879865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 11974006 - 11973942
Alignment:
Q  364 gattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacc 429  Q
    ||||||| ||||||||||||| || ||| ||||||| | ||| ||||||||| |||||||||||||    
T  11974006 gattttatgattttcgattttgctattctctttcaatc-tgatgcaaaatcctgattttgacaacc 11973942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 27836168 - 27836131
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacga 373  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  27836168 ttgagtaaaatccttcgattttgattgcgattttacga 27836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 5e-54; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 179 - 432
Target Start/End: Complemental strand, 17055943 - 17055694
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||||||||||| |||||||||  ||||| | |||||||||||| |||||||| |||||  |||||||||||| |||||||||||    
T  17055943 ttagtcatttatgtataagtattttgtggactttaaattgagtcatatatgactatatataatttatagcatat--ttagcattatttttgttttggtaa 17055846  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttc 378  Q
    |||| ||| ||||||||| | | ||||| ||||||| ||||||||||  || |||||||||||||||||||||||||||||||  |||||||||| |  |    
T  17055845 aatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgagtccc 17055746  T
Q  379 gatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||| |  | ||||||| ||||  ||| |||  |||||||||||||||||||    
T  17055745 gattttacaatcccctttcgacct--aagtaaagacccgattttgacaaccttg 17055694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 219 - 429
Target Start/End: Original strand, 47786003 - 47786209
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||||||| |  | |||||||||| ||||||||| ||| ||| |||  ||||||||||||    
T  47786003 agtcatttatgactatataccatttataacatatatttagtattattttt--tgtggtaaaatccatcgatttttatttcgattttgtgatttcttatat 47786100  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    | |||||  || |||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||||| ||||||||||  ||  ||||||||||    
T  47786101 caattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacgattgtcgattttgctcttctctttcaacct--aaagaaaatcccga 47786198  T
Q  419 ttttgacaacc 429  Q
    |||||||||||    
T  47786199 ttttgacaacc 47786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 432
Target Start/End: Original strand, 13100328 - 13100545
Alignment:
Q  212 taaaccgagtcttttatgactatatacaatttataacatatatttagcatt-atttctgttttggtaaaatcaatcgattttgattacgaatttacgatt 310  Q
    |||||| |||| ||||||||||||||| |||| |||||||||||||| ||| ||||   ||| ||||||||| ||||||||||||| ||| |||| ||||    
T  13100328 taaaccaagtcatttatgactatataccatttgtaacatatatttagtatttattt---tttgggtaaaatccatcgattttgattgcgattttaagatt 13100424  T
Q  311 tcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaa 410  Q
    |||||||||||||||  ||  ||  ||||||||||||||| ||||||||||  |||||||||| || ||||||| |  ||||||||| | ||||||| ||    
T  13100425 tcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttacgagttccgattttgccattccctttcga-cttgaagtaa 13100523  T
Q  411 aatcccgattttgacaaccttg 432  Q
    | ||||||||||||||||||||    
T  13100524 agtcccgattttgacaaccttg 13100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 224 - 432
Target Start/End: Complemental strand, 25146749 - 25146542
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttct-tatatcgat 322  Q
    ||||||||||||||||||||||||| ||||||||| || | || | ||| ||||||||| ||||||||||||| ||| |||  || || | |||||||||    
T  25146749 tttatgactatatacaatttataacgtatatttagtatcaatttt-tttgggtaaaatccatcgattttgattgcgatttttagaattttctatatcgat 25146651  T
Q  323 tcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgatttt 422  Q
    |||   | ||   ||||||||||||||||||||||||||  ||||||||||||| ||||||| || ||||||||||||| ||||| ||| ||| ||||||    
T  25146650 tctacgaaagaccttgagtaaaatccttcgattttgattgcgattttacgatttccgattttgctattccctttcaacc-tgaagtaaagtcctgatttt 25146552  T
Q  423 gacaaccttg 432  Q
    ||||||||||    
T  25146551 gacaaccttg 25146542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 345
Target Start/End: Complemental strand, 27917395 - 27917232
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||| |||||||| |||||||| ||||||||| |||||  ||||    
T  27917395 ttagtcatttatgtataagtattttgt-gactttaaactgagttatttatgactatatacgatttataatatatattttgcattatttatgttt--gtaa 27917299  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaa 345  Q
    |||  ||||||||||||| |||   ||| |||||||||||| ||| |  || |||||||||||||||    
T  27917298 aattcatcgattttgattgcgataatacaatttcttatatcaattatacaaaagtagttgagtaaaa 27917232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 224 - 430
Target Start/End: Complemental strand, 21846254 - 21846050
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||| |||||||| |||||||||||||||||||| |||| || | ||| ||||||||  ||| ||||||||| ||| ||||| ||||||||||||||||    
T  21846254 tttataactatatataatttataacatatatttagtattaatttt-tttgggtaaaattcatctattttgattgcgattttacaatttcttatatcgatt 21846156  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||  ||||||||||||||||||||||||||  ||||||| || |  ||||||| || ||||||||| ||| || || ||| ||| |||||||    
T  21846155 ctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagagtcccgattttgctattccctttcgacc-tggagtaaagtcctgattttg 21846057  T
Q  424 acaacct 430  Q
    |||||||    
T  21846056 acaacct 21846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 29402323 - 29402413
Alignment:
Q  8 attattctataagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtggctaaacgaatttgactaagtcaactattagtat 98  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  29402323 attactctttaagatgaaagtaaatatccttagactaaatcaatttaaagaaatgtggctaaacgaattagactaagtcaacaactagtat 29402413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 429
Target Start/End: Original strand, 32881479 - 32881672
Alignment:
Q  227 atgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattctt 326  Q
    |||||||||||| ||||||||||||||||||| ||| |||        |||||| | || |||||||||| ||| ||||| ||||||||||||||||||     
T  32881479 atgactatataccatttataacatatatttagtatttttt--------gtaaaagccattgattttgattgcgattttacaatttcttatatcgattcta 32881570  T
Q  327 aaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgaca 426  Q
     ||  |||||||||||||||||||||||||   ||  |||||||||||| |||||||| || ||| ||||||| | |||||||||||||||||||||| |    
T  32881571 caaacgtagttgagtaaaatccttcgatttcagttgcgattttacgattgtcgattttgcttttctctttcaatc-tgaagcaaaatcccgattttgaaa 32881669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 432
Target Start/End: Complemental strand, 41032701 - 41032547
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattt 376  Q
    |||||| ||||||||| ||| ||| ||||| ||||||||||||||||||  || | |||||||||||||| ||||||||||  ||  ||||||||||||     
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgatta 41032602  T
Q  377 tcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    || ||||| |||||| ||||||||| ||||| |||||||| |||||||||||||||    
T  41032601 tcaattttgctcttctctttcaacc-tgaagtaaaatccctattttgacaaccttg 41032547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 219 - 429
Target Start/End: Complemental strand, 16125440 - 16125232
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||| ||||||| ||||||||||||||||||| ||||||  | ||| |||||  || ||||||||||||| ||| ||||| |||||||||||    
T  16125440 agtcatttatgaatatataccatttataacatatatttagtattattatt-tttgggtaacgtccatcgattttgattgcgattttacaatttcttatat 16125342  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  ||  ||  ||||||||||||||||||||||||||  |||||||||| |  | ||||| || ||||||||| ||| ||||| ||| | ||||    
T  16125341 cgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttactattccctttcgacc-tgaagtaaagttccga 16125243  T
Q  419 ttttgacaacc 429  Q
    |||| ||||||    
T  16125242 ttttaacaacc 16125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 240 - 432
Target Start/End: Original strand, 16434674 - 16434864
Alignment:
Q  240 atttataacatatatttagcatta-tttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttg 338  Q
    |||||||||||||||||| ||||| ||| |||||||||| |||| ||||||||||||| ||| |||  | | ||||||||| |||||  || ||| || |    
T  16434674 atttataacatatatttatcattaatttttgttttggtagaatccatcgattttgattgcgatttt--gttatcttatatcaattctacaaaagttgtcg 16434771  T
Q  339 agtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||||||||||||||||||||   |||||||||||||||||||| || ||||||||  |||| | || ||||||| ||||||||||| ||||    
T  16434772 agtaaaatccttcgattttgattgcaattttacgattttcgattttgctattcccttttgacctag-agaaaaatcctgattttgacaatcttg 16434864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 23528800 - 23529011
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||| ||||||||  ||||||  | ||  ||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  23528800 agtcatttatgactatataccatttataacgtatatttattattattattattg-ggtaaaatccatcgattttgattgcgattttacaatttcctatat 23528898  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  ||||||||||||||||||||||||||  |||||||||| |  |||| || || |||| ||| |||| ||||  ||| | ||||    
T  23528899 cgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgatcttactgttcctttttaacc-tgaaataaagttccga 23528997  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  23528998 ttttgacaaccttg 23529011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 403
Target Start/End: Complemental strand, 9955015 - 9954835
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttg-gtaaaatcaatcgattttgattacgaatttacgatttcttatatcgat 322  Q
    ||||||||||||||| |||||||||||||||| || ||||||  | ||||| |||||||| |||||| |||||| ||| ||||| ||||| ||||| |||    
T  9955015 tttatgactatataccatttataacatatattcagtattattatttttttgtgtaaaatccatcgatcttgattgcgattttacaatttcctatatggat 9954916  T
Q  323 tcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaacctt 403  Q
    |||| || |||  ||  ||||||||||||||||||||||  |||||||||| |  ||||||| || ||||||||| |||||    
T  9954915 tcttgaaaagtcctttggtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgacctt 9954835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 219 - 377
Target Start/End: Complemental strand, 18304796 - 18304639
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||| ||||| ||||||||| |||| || | ||||| ||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  18304796 agtcatttatgactatataccattcataacgtatatttagtattaatttt-ttttgataaaatccatcgattttgattgcgattttacaatttcctatat 18304698  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
    |||||||  || |||  || ||||||||||||||||||||| |  ||||||||||||||    
T  18304697 cgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgattttacgatttt 18304639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 18891620 - 18891488
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    |||| |||||||||||||||||||||| || ||||||| || || ||||||||||| || ||||||||| ||||||||| ||||||||  ||||||||||    
T  18891620 ttagccatttatgtataagtattttgtggaatttaaactgaatcatttatgactatctataatttataatatatatttaacattattttcgttttggtaa 18891521  T
Q  279 aatcaatcgattttgattacgaatttacgattt 311  Q
    |||  ||| ||||||||| ||| | ||||||||    
T  18891520 aattcatcaattttgattgcgattctacgattt 18891488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 396
Target Start/End: Complemental strand, 17869744 - 17869559
Alignment:
Q  210 tttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgat 309  Q
    |||||||  |||||||||| || |||||| ||||| ||||||||||||| ||||||  | ||||||||||||  ||||||||||||| ||| ||||| ||    
T  17869744 tttaaactaagtcttttataaccatatactatttacaacatatatttagtattattatt-ttttggtaaaattcatcgattttgattgcgattttacaat 17869646  T
Q  310 ttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt 396  Q
    || ||| || ||||||  || |||  ||||||||||||||| ||||||||||  |||||||||  |  ||||||| |||||||||||    
T  17869645 tttttacattgattctataaaagtccttgagtaaaatcctttgattttgattgcgattttacgtgtcccgattttgctcttcccttt 17869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 432
Target Start/End: Original strand, 30619156 - 30619295
Alignment:
Q  290 tttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctct 389  Q
    ||||||| ||| ||||| |||| | |||||||||||  || |||||||||||||||||||||||||||  ||  || ||||||||| |||||||| ||||    
T  30619156 tttgattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcga-tttacgattgtcgattttgctct 30619254  T
Q  390 tccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    || ||||| ||| ||||| ||||||||||||||||||||||||    
T  30619255 tctctttcgacc-tgaag-aaaatcccgattttgacaaccttg 30619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 9352048 - 9351837
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||| ||||||||||| ||||||||||||||||||| |||| || | ||| ||||||||  |||||||||||||  || ||||| ||||| |||||    
T  9352048 agtcatttttgactatataccatttataacatatatttagtattaatt-tttttgggtaaaattcatcgattttgattgtgattttacaatttcctatat 9351950  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
     ||||||  || |||  |||  ||||||||| |||||||||||  |||||||||| |  ||||||| || ||| ||||| ||| ||||| ||| ||  ||    
T  9351949 agattctacaaaagtccttggataaaatcctacgattttgattgcgattttacgagtcccgattttgctattcgctttcgacc-tgaagtaaagtcttga 9351851  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  9351850 ttttgacaaccttg 9351837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 432
Target Start/End: Original strand, 12513472 - 12513626
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttt 369  Q
    ||||||||||||| ||||||||||||| ||| ||||| |||||||||       ||  |  |||||||||||||||||||| ||||||| ||  ||||||    
T  12513472 ttttggtaaaatctatcgattttgattgcgattttacaatttcttat-------ctacagaagtagttgagtaaaatcctttgattttggttgcgatttt 12513564  T
Q  370 acgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    || ||| |||||||| |||||| ||||  ||| |||||||||||||| |||||||||||||||    
T  12513565 acaattgtcgattttgctcttctcttttgacc-tgaagcaaaatcccaattttgacaaccttg 12513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 431
Target Start/End: Complemental strand, 14074397 - 14074258
Alignment:
Q  291 ttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctctt 390  Q
    |||||| ||| ||||| ||||| ||||||||||||  || |||  |||||||||||||||||||||||||| |||||||| || || | ||||| || ||    
T  14074397 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctatt 14074298  T
Q  391 ccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||| ||| ||||| ||| ||| |||||||||||||||    
T  14074297 ccctttcgacc-tgaagtaaagtcctgattttgacaacctt 14074258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 12002857 - 12002769
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||  | |||||||||| ||| |||||||    
T  12002857 agtcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaatc-cttgattttgattgcgattttacga 12002769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 42180050 - 42179845
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||| ||| ||||| | | ||||||||||||| |||||||||||||  |  ||||| ||||| ||       
T  42180050 agtcatttatgactatataccatttataacatatatatagtattatattttttttggtaaaatccatcgattttgattgtggttttacaatttccta--- 42179954  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
        |||  || |||  | || |||||||||||||||||||||  |||||||||| |||||||| | || |||||||| ||||  |||| ||| | | ||    
T  42179953 ----tctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacgagtttcgattatgctattcccttttaacc-cgaagtaaatttctga 42179859  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  42179858 ttttgacaaccttg 42179845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 13276251 - 13276146
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||  ||||||||||||||||||| |||| || | |||||||| | || ||||||||||||| | | ||||| |||||||||||    
T  13276251 agtcatttatgactatatatcatttataacatatatttagtatta-ttattttttggtatagtccatcgattttgattgcaattttacaatttcttatat 13276153  T
Q  319 cgattct 325  Q
    |||||||    
T  13276152 cgattct 13276146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 17197526 - 17197441
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaattta 305  Q
    |||| ||||||||||||| |||||| ||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||| ||||    
T  17197526 agtcatttatgactatatgcaatttgtaacatatatttaacattatttttgttttggtagaatc-ctcgattttgattgcgatttta 17197441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 397
Target Start/End: Complemental strand, 19009879 - 19009756
Alignment:
Q  274 ggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacga 373  Q
    ||||||||| |  |||||||||| ||| ||||| ||||| |||||||||| |  || |||  ||||||||||||||| ||||||||||  ||||||||||    
T  19009879 ggtaaaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacga 19009780  T
Q  374 ttttcgatttttctcttccctttc 397  Q
     |  ||||||| || |||||||||    
T  19009779 gtcccgattttgctattccctttc 19009756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 24117600 - 24117694
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaa--ccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttgg 275  Q
    ||||||||||||||| |||||||||  ||||||||    ||||| ||||||||||||| ||||||| |||  |||||||||||||||| ||||||||    
T  24117600 agtcatttatgtatatgtattttgtgaactttaaattttgagtcatttatgactatatgcaatttaaaac--atatttagcattatttttgttttgg 24117694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 424
Target Start/End: Complemental strand, 9128816 - 9128619
Alignment:
Q  228 tgactatatacaatttataacatatatttagcattatttctgtt-ttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattctt 326  Q
    ||||||||||| ||||||||||||| ||||| ||||||  | |  || |||||||  ||  ||||||||| ||| ||||| ||||  ||||||||| ||     
T  9128816 tgactatataccatttataacatatctttagtattattattatcatttgtaaaattcataaattttgattgcgattttacaattttctatatcgatccta 9128717  T
Q  327 aaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttga 424  Q
     || | |  || ||||||||||||||||||||||  ||||||||||| |  ||||||| || ||||||||    ||||| | ||||||||||||||||    
T  9128716 caaaaatcctttagtaaaatccttcgattttgatcgtgattttacgagtcccgattttgctattcccttttttacttgaggtaaaatcccgattttga 9128619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 22789446 - 22789503
Alignment:
Q  339 agtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt 396  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||  |||||||    
T  22789446 agtaaaatcctttgattttgattgtgattttacgatttgcgatttttctaatcccttt 22789503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 18228458 - 18228533
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaa 345  Q
    ||||||||| ||  |||||| |||||| ||| ||||||||||||||||||||||||  || || ||||||||||||    
T  18228458 ttttggtaacattcatcgatgttgattgcgattttacgatttcttatatcgattctacaaaagaagttgagtaaaa 18228533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 18337300 - 18337205
Alignment:
Q  190 tgtataagtattttgtagactttaaacc-gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcga 288  Q
    ||||| |||||||||| || |||||||  ||||| |||||||||||||||||||||||||||        ||| |||| ||||||||||||||| |||||    
T  18337300 tgtatgagtattttgtggattttaaacttgagtcatttatgactatatacaatttataacat--------catcatttttgttttggtaaaatccatcga 18337209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 17197398 - 17197306
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacc 429  Q
    ||||||||||||||||||||||  ||  |||||||||| || ||||||| ||  |||||||| | ||||||| ||| |||||||||||| ||||    
T  17197398 ttgagtaaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcga-cttgaagtaaagtcccgattttgataacc 17197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 9327194 - 9327113
Alignment:
Q  223 ttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttac 306  Q
    |||| ||||||||||| |||||||| |||||||||| ||||||  | ||| ||||||||  ||||||||||||| ||| |||||    
T  9327194 ttttttgactatataccatttataatatatatttagtattatt--tttttgggtaaaattcatcgattttgattgcgattttac 9327113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 13276297 - 13276257
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  13276297 aaaatcaatcgattttgattgcgattttacgatttcttata 13276257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 21242921 - 21242855
Alignment:
Q  311 tcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
    |||||||||||||||  || | |||||||||||||| |||| ||| | |||| ||||||||||||||    
T  21242921 tcttatatcgattctacaaaattagttgagtaaaattcttcaattgtaattacgattttacgatttt 21242855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 9327246 - 9327206
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  9327246 aaaatccatcgattttgattgcgattttacgatttcttata 9327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 9954823 - 9954768
Alignment:
Q  378 cgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgtt 434  Q
    ||||||| || ||||||||| ||||| ||| ||| ||||||||||||||||||||||    
T  9954823 cgattttgctattccctttcgacctt-aagtaaagtcccgattttgacaaccttgtt 9954768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 9955066 - 9955026
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  9955066 aaaatccatcgattttgattgcgattttacgatttcttata 9955026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 12513379 - 12513419
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  12513379 aaaatccatcgattttgattgcgattttacgatttcttata 12513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 18337222 - 18337135
Alignment:
Q  340 gtaaaatccttcgattttgattatgattttacgattttcgatttttctcttcccttt-caaccttgaagcaaaatcccgattttgacaa 427  Q
    ||||||||| |||||||| |||   ||||||| |||||| ||||| || |||||||| | |||| ||||||||||||||||||| ||||    
T  18337222 gtaaaatccatcgattttaattgcaattttactattttcaattttgcttttcccttttcgacct-gaagcaaaatcccgatttttacaa 18337135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 19009977 - 19009937
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  19009977 aaaatccatcgattttgattgcgattttacgatttcttata 19009937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 8e-53; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 23897955 - 23898165
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||| ||| | ||||||||||||| |||||||||||||  || ||||| |||||||||||    
T  23897955 agtcatttatgactatataccatttataacatatatttagtatttttttt-ttttggtaaaatccatcgattttgattgagattttacaatttcttatat 23898053  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||||||||||||||||||||||||||| ||  |||||||||||| |||||||| |||||| | ||| ||| ||||||||||||||||    
T  23898054 cgattctacaa-agtagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacc-tgaagcaaaatcccga 23898151  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||| ||||    
T  23898152 ttttgacaatcttg 23898165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 179 - 376
Target Start/End: Complemental strand, 4841853 - 4841658
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||  ||||| | |||||||||||||||  ||||||||||||  ||||||||||||||||||| ||||  ||| |||||||||||    
T  4841853 ttagtcatttatgtataaacattttatggactttaaaccgagtaatttatgactata--caatttataacatatattttgcatattttttgttttggtaa 4841756  T
Q  279 aatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattt 376  Q
    |||  ||||||||||||| ||| |||||||||||||||  |||||||  || |||||||||||||||||||| |||||||||| ||||||| ||||||    
T  4841755 aatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatttttcgattt 4841658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 19748477 - 19748688
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| |||| |||||||||  |||||||| |||||||||| ||||||  | || |||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  19748477 agtcatttaagactatatatcatttataaaatatatttagtattattatt-ttctggtaaaatccatcgattttgattgcgattttacaatttcctatat 19748575  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||  || |||  ||||||||||||||||||||||||||  |||||||||| |  ||||||| || ||||||||||||| ||||  ||| ||||||    
T  19748576 cgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctattccctttcaacc-tgaattaaagtcccga 19748674  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  19748675 ttttgacaaccttg 19748688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 7223656 - 7223870
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatt----tagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttctt 314  Q
    |||| ||||||||||||||| ||||||||||||||||    ||| ||||||| ||||| ||||||||| || |||| ||||| ||| ||||| ||||| |    
T  7223656 agtcatttatgactatataccatttataacatatattaatttagtattattt-tgttt-ggtaaaatccattgattctgattgcgattttacaatttcct 7223753  T
Q  315 atatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatc 414  Q
    |||||||||||  || |||  ||||||||||||||||||||||||||   ||||||||| |  ||||||| || ||||||||| ||| ||||| ||| ||    
T  7223754 atatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctattccctttcgacc-tgaagtaaagtc 7223852  T
Q  415 ccgattttgacaaccttg 432  Q
    ||||||||||||||||||    
T  7223853 ccgattttgacaaccttg 7223870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 275 - 421
Target Start/End: Complemental strand, 2912191 - 2912046
Alignment:
Q  275 gtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgat 374  Q
    ||||||||  |||||||||||| ||| ||||| |||||||||| | |||||  || ||||||||||||||||||||| |||| |||||||||||||||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacgat 2912092  T
Q  375 tttcgatttttctcttccctttcaaccttgaagcaaaatcccgattt 421  Q
    | |||||||  |||||| ||||||||| |||||||||||||| ||||    
T  2912091 tatcgatttcgctcttctctttcaacc-tgaagcaaaatcccaattt 2912046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 270 - 432
Target Start/End: Complemental strand, 11327497 - 11327336
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgatttt 369  Q
    ||||||||||||| |||||||||| || ||| ||||| ||||| ||||||||||||  || |||  ||||||||||| ||||||||||||||  ||||||    
T  11327497 ttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgatttt 11327398  T
Q  370 acgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||| | |||||||| || ||||||||||||| ||||| |||  |||||||||||||||||||    
T  11327397 acgagtctcgattttgctattccctttcaacc-tgaagtaaagccccgattttgacaaccttg 11327336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 431
Target Start/End: Complemental strand, 30912397 - 30912181
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttg-----gtaaaatcaatcgattttgattacgaatttacgatttct 313  Q
    |||| ||||||| ||||||  |||||| |||||||||||| ||||||| | | | |     |||||||| ||||||| ||||| ||| | || |||||||    
T  30912397 agtcatttatgattatatatcatttatcacatatatttagtattatttttttgtggtaaaagtaaaatccatcgattatgattgcgattctatgatttct 30912298  T
Q  314 tatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaat 413  Q
    |||||||||| |  || ||||||||| ||||||||||| |||||| ||  |||||||||||| |||||||| || ||| ||||||||| |||||||||||    
T  30912297 tatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagattttacgattatcgattttgctattctctttcaacc-tgaagcaaaat 30912199  T
Q  414 cccgattttgacaacctt 431  Q
     |||||||||||||||||    
T  30912198 tccgattttgacaacctt 30912181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 428
Target Start/End: Complemental strand, 26053276 - 26053074
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||||||||||| |||||||||||||| |||| ||||||  | ||||||||||||| ||||||||||||| ||| ||||| |||||  |||||||||    
T  26053276 tttatgactatataccatttataacatatagttagtattattatt-ttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgatt 26053178  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||  |||||||||||| |||||||||||||  |||||||||| |  | ||||| || || |||||| ||| ||||| ||| ||| |||||||    
T  26053177 ctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacc-tgaagtaaagtcctgattttg 26053079  T
Q  424 acaac 428  Q
    |||||    
T  26053078 acaac 26053074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 224 - 428
Target Start/End: Complemental strand, 26073329 - 26073127
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||||||||||| |||||||||||||| |||| ||||||  | ||||||||||||| ||||||||||||| ||| ||||| |||||  |||||||||    
T  26073329 tttatgactatataccatttataacatatagttagtattattatt-ttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgatt 26073231  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||  |||||||||||| |||||||||||||  |||||||||| |  | ||||| || || |||||| ||| ||||| ||| ||| |||||||    
T  26073230 ctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacc-tgaagtaaagtcctgattttg 26073132  T
Q  424 acaac 428  Q
    |||||    
T  26073131 acaac 26073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 7918333 - 7918124
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||  |||||||||||| |||||| |||||||   ||||||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  7918333 agtcatttatgactatatatcatttataacataaatttagtattattt---ttttggtaaaatccatcgattttgattgcgattttacaatttcctatat 7918237  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
     ||||||  || |||  ||||||||||| ||||||||||||||   ||||||||| |   |||| | || ||||||||| ||| ||||| |||  |||||    
T  7918236 tgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctattccctttcgacc-tgaagtaaagccccga 7918138  T
Q  419 ttttgacaaccttg 432  Q
    ||||||||||||||    
T  7918137 ttttgacaaccttg 7918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 254 - 431
Target Start/End: Complemental strand, 3573851 - 3573674
Alignment:
Q  254 tttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcga 353  Q
    ||||||||||||| |||||||||||||   ||||||||||||| ||| ||||| |||||||||||| |||||  || |||||||||||||| |||| |||    
T  3573851 tttagcattatttttgttttggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacga 3573752  T
Q  354 ttttgattatgattttacgattttcgatttttctcttccc-tttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
    ||||||||  |||||||||| |   |||||| || ||||| |||| ||| ||||| ||| |||||||||||||||||||    
T  3573751 ttttgattgcgattttacgagtcctgattttgctattcccttttcgacc-tgaagtaaagtcccgattttgacaacctt 3573674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 402
Target Start/End: Complemental strand, 20432633 - 20432397
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggt 276  Q
    ||||||||||||||| ||||||||||| ||||| |||    ||||  ||||||||||||| |||||||||||||||||| || ||||||| |||||||||    
T  20432633 ttagtcatttatgtaaaagtattttgtggacttaaaattttgagttatttatgactatatgcaatttataacatatatt-agtattatttttgttttggt 20432535  T
Q  277 aaaatcaatcgattttgattacgaatttacgattt-------------cttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattat 363  Q
      |||| ||||||||||||| ||||||||||||||             | ||||||||||||  || | ||||| |||||||| |||| |||||||||      
T  20432534 ggaatccatcgattttgattgcgaatttacgattttggattttcctaccctatatcgattctacaaaactagttaagtaaaattcttcaattttgattgc 20432435  T
Q  364 gattttacgattttcgatttttctcttccctttcaacct 402  Q
    ||||||||||||||||||||| || || |||||||||||    
T  20432434 gattttacgattttcgattttgctatt-cctttcaacct 20432397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 432
Target Start/End: Complemental strand, 33593189 - 33592925
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||||||||||||||||||| ||||   |||||  | |||||||||| ||||||||||||||| |||| |||||||| | ||||||||     
T  33593189 agtcatttatgtataagtattttgtagacttgaaactttgagtcaataatgactatatgcaatttataacatatgtttaacattatttttcttttggtag 33593090  T
Q  279 aatcaatcgattttgattacgaatttacgatt-------------tcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatga 365  Q
    |||| ||||||||||||| ||| |||| ||||             || |||||| |||||  || ||||||||||| ||||| |||||||| ||||   |    
T  33593089 aatccatcgattttgattgcgattttatgatttttgattttgctatcctatatcaattctacaaaagtagttgagt-aaatcattcgatttcgattgcaa 33592991  T
Q  366 ttttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    ||||||||||||| |||||  | ||||||||| |   ||||||||||||||||||||||||| ||||    
T  33592990 ttttacgattttcaattttgttattccctttcga-tatgaagcaaaatcccgattttgacaatcttg 33592925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 432
Target Start/End: Original strand, 17103344 - 17103550
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    |||| |||||||||  |||||| |||||||||||  |||| || | ||| ||||||||| ||||||||||||| ||| ||||| ||||| ||||||||||    
T  17103344 tttacgactatatatcatttatgacatatatttattattaatttt-tttaggtaaaatccatcgattttgattgcgattttacaatttcctatatcgatt 17103442  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttg 423  Q
    ||  || |||  ||||||||||||||||| | ||||||  |||||||||| |   ||||||  | ||||||||| | ||||||| ||| |||||||||||    
T  17103443 ctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgagtcctgattttgttattccctttcga-cttgaagtaaagtcccgattttg 17103541  T
Q  424 acaaccttg 432  Q
    |||||||||    
T  17103542 acaaccttg 17103550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 18490664 - 18490536
Alignment:
Q  180 tagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaa 279  Q
    |||||||||||||||| ||||||||| ||||||| || ||||  ||||  ||||||||| |||||||||||||||||| |||||||| || ||||||| |    
T  18490664 tagtcatttatgtatatgtattttgtggactttatactgagttatttagcactatatacgatttataacatatatttatcattatttttgatttggtaga 18490565  T
Q  280 atcaatcgattttgattacgaatttacga 308  Q
    ||| ||| ||||||||| ||| |||||||    
T  18490564 atccatcaattttgattgcgattttacga 18490536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 402
Target Start/End: Original strand, 31407397 - 31407635
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggt 276  Q
    ||||||||||||||||||||||||||| || |||||||   ||||| |||||||| |||| |||||||||||||||||||| |||||||| |||||||||    
T  31407397 ttagtcatttatgtataagtattttgtggaatttaaactttgagtcatttatgacaatatgcaatttataacatatatttaacattatttttgttttggt 31407496  T
Q  277 aaaatcaatcgattttgattacgaatttacgatttct-------------tatatcgattcttaaatagtagttgagtaaaatccttcgattttgattat 363  Q
    | |||   |||| |||||||  || |||||||||| |             |||||| ||  |  || ||||||||||||||||| || |||||||||| |    
T  31407497 agaatgcgtcgactttgattgtgattttacgatttttgattttgctaccctatatccataatataaaagtagttgagtaaaatcttttgattttgattgt 31407596  T
Q  364 gattttacgattttcgatttttctcttccctttcaacct 402  Q
    |||||||  ||||||||||||  | ||||||||||||||    
T  31407597 gattttataattttcgattttgttattccctttcaacct 31407635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 224 - 432
Target Start/End: Original strand, 27890522 - 27890741
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga-------------tt 310  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||   |||||||||||| ||| |||||||             |     
T  27890522 tttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaat-tctcgattttgattgcgattttacgagtcctgattttgcta 27890620  T
Q  311 tcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaa 410  Q
    || ||||||||||||  || |||  |||||||||||||||| |||||||||| |||||||||| || | ||||| ||  |||||||||| ||||||| ||    
T  27890621 tcctatatcgattctacaaaagtccttgagtaaaatccttcaattttgattacgattttacgagttccaattttactactccctttcaa-cttgaagtaa 27890719  T
Q  411 aatcccgattttgacaaccttg 432  Q
    | || ||| |||||||||||||    
T  27890720 agtctcgaatttgacaaccttg 27890741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 219 - 402
Target Start/End: Complemental strand, 15528095 - 15527913
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||| ||||||||| ||||||||||||||||||| ||||  | | ||| ||  ||||| |||||||| |||| ||| ||||| ||||| |||||    
T  15528095 agtcatttataactatataccatttataacatatatttagtattaaattt-tttgggggaaatccatcgatttcgattgcgattttacaatttcctatat 15527997  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaacct 402  Q
    |||||||  || |||  ||||||||||||||||||||||||||  |||||| ||| || ||||||| || || |||||| ||||    
T  15527996 cgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagttccgattttgctatttcctttcgacct 15527913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 432
Target Start/End: Complemental strand, 17543725 - 17543504
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcatta---------tttctgttttggtaaaatcaatcgattttgattacgaatttacgat 309  Q
    |||| |||| |||||||||| ||||||||||||||||||| ||||         |||   ||||||||||||| ||||||||||||| ||| ||||| ||    
T  17543725 agtcatttacgactatataccatttataacatatatttagtattattattttttttttatttttggtaaaatccatcgattttgattgcgattttacaat 17543626  T
Q  310 ttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagca 409  Q
    |||  |||||||||||  || |||  ||||||||||||||||||||||||||  ||||||| || |  ||||||| || |||| |||| ||| ||||| |    
T  17543625 ttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatttcgattttatgagtcccgattttgctattccttttcgacc-tgaagta 17543527  T
Q  410 aaatcccgattttgacaaccttg 432  Q
    || |||| ||||| |||||||||    
T  17543526 aagtcccaattttaacaaccttg 17543504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 432
Target Start/End: Complemental strand, 22498371 - 22498214
Alignment:
Q  274 ggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacga 373  Q
    ||||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||  || |||  |||||||||||| ||| |||||||||  ||||||||||    
T  22498371 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacga 22498272  T
Q  374 ttttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
     |  | ||||| || ||||||||| ||| ||||| ||| |||| |||||||||||||||    
T  22498271 gtcccaattttgctattccctttcgacc-tgaagtaaagtcccaattttgacaaccttg 22498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 20400099 - 20399995
Alignment:
Q  194 taagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattt 291  Q
    |||||||||||| ||||||||||   ||||  ||||||||||||| |||||||||||||||||||| |||||||| |||||||||  |||| ||||||||    
T  20400099 taagtattttgtggactttaaacattgagttatttatgactatatgcaatttataacatatatttatcattatttttgttttggtggaatccatcgattt 20400000  T
Q  292 tgatt 296  Q
    |||||    
T  20399999 tgatt 20399995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 5422665 - 5422582
Alignment:
Q  198 tattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    |||||||| |||||||||  | ||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  5422665 tattttgtggactttaaattg-gtcatttatgactatatataatttataacatatatttagcattatttttgttttggtaaaatc 5422582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 7622006 - 7621875
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc---gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggta 277  Q
    ||||||||||||||||||||||| |  |||| ||||    || || ||||||||||||  |||||||||| ||||||||| |||||||| ||||||||||    
T  7622006 agtcatttatgtataagtattttatgaacttgaaacttttgaatcatttatgactataggcaatttataatatatatttatcattatttttgttttggta 7621907  T
Q  278 aaatcaatcgattttgattacgaatttacgattt 311  Q
     ||||  |||| ||||||||||| ||| ||||||    
T  7621906 gaatc--tcgagtttgattacgatttttcgattt 7621875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 370
Target Start/End: Complemental strand, 27233271 - 27233134
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaata 331  Q
    ||||||| ||||||||||||||||||| |||| || | || |||||||||| ||||||||||||| ||| ||||| ||||  |||| |||||||   | |    
T  27233271 tatataccatttataacatatatttagtatta-ttgttttatggtaaaatctatcgattttgattgcgattttacaattttctatagcgattctactaaa 27233173  T
Q  332 gtagttgagtaaaatccttcgattttgattatgatttta 370  Q
    |   |||||||||||||||| |||||||||  |||||||    
T  27233172 gaccttgagtaaaatccttcaattttgattgcgatttta 27233134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 10508982 - 10508897
Alignment:
Q  240 atttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattct 325  Q
    ||||||||||||||||||  ||||||  | ||||| ||||||| ||| ||||||||| ||| ||||| ||||||||||||||||||    
T  10508982 atttataacatatatttattattattattattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattct 10508897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 432
Target Start/End: Original strand, 21354942 - 21355030
Alignment:
Q  343 aaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||| ||||||||||||  |||||||||| |   ||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||    
T  21354942 aaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaa-cttgaagtaaaatcccaattttgacaaccttg 21355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 428
Target Start/End: Complemental strand, 27614525 - 27614434
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaac 428  Q
    |||||||||||||||||||||||||| ||||||||||| |  ||||||| || ||||||||| ||| ||||| ||| |||  |||||||||||    
T  27614525 ttgagtaaaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcgacc-tgaagtaaattcctaattttgacaac 27614434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 645416 - 645463
Alignment:
Q  218 gagtcttttatgactatatacaatttataacatatatttagcattatt 265  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  645416 gagtcatttatgactatatgcaatttataacatatatttagcattatt 645463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 428
Target Start/End: Original strand, 23506099 - 23506193
Alignment:
Q  333 tagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaac 428  Q
    ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||| || ||| ||||| | ||| ||| |||||||| |||| ||||||    
T  23506099 tagttgactaaaatccttcgattttaattgtgattttacaattttcgattttgctattctctttcga-cttaaagtaaaatccccatttcgacaac 23506193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 21354889 - 21354972
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    ||||||||||||||| ||||||||||||||||||| ||||  | | ||| ||| ||||| ||||||||||||| ||| |||||||    
T  21354889 tttatgactatataccatttataacatatatttagtattaaat-tatttgggtgaaatccatcgattttgattgcgattttacga 21354972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 1179079 - 1179177
Alignment:
Q  331 agtagttgagtaaaatccttc-gattttgattatgattttacgattttcgatttttctcttc-cctttcaaccttgaagcaaaatcccgattttgacaac 428  Q
    ||||||||||||||||||||| ||||||||||  || |||| |||||| ||  || |  ||| ||||||||||| |||||||||||||||||||||||||    
T  1179079 agtagttgagtaaaatccttcagattttgattgcgactttaggatttttgaaattgccattcacctttcaacct-gaagcaaaatcccgattttgacaac 1179177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 433
Target Start/End: Complemental strand, 33583559 - 33583439
Alignment:
Q  312 cttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatt-tttctcttccctttcaaccttgaagcaa 410  Q
    ||||||||||||||  || |||  || ||||||||| ||||||||||||| |||||||||||||| ||||| || ||   ||||||| |||  |||| ||    
T  33583559 cttatatcgattctacaaaagtccttaagtaaaatc-ttcgattttgattttgattttacgatttacgattattgctaacccctttcgacc-ggaagtaa 33583462  T
Q  411 aatcccgattttgacaaccttgt 433  Q
    |||||||||||||||||| ||||    
T  33583461 aatcccgattttgacaacgttgt 33583439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 311
Target Start/End: Complemental strand, 4596843 - 4596761
Alignment:
Q  232 tatatacaatttataacatatatttagcattattt---ctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||| ||||| ||||||| |||||||||||||||   ||||||||||| |||| | ||||||| ||| ||| ||||||||||    
T  4596843 tatatgcaattaataacatgtatttagcattatttttgctgttttggtagaatccaccgatttttattgcgattttacgattt 4596761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 17103293 - 17103333
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  17103293 aaaatccatcgattttgattacgattttacgatttcttata 17103333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 3573916 - 3573866
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatg 229  Q
    |||||||||||||| |||||||||||| |||||||| | ||||| ||||||    
T  3573916 ttagtcatttatgtttaagtattttgtggactttaatctgagtcatttatg 3573866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 31108252 - 31108377
Alignment:
Q  185 atttatgtataagtattttgtagactttaaaccg--agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    ||||||||||| ||||||||  |||||| |||    |||| |||||||||||   ||||||||||||| |||||||| ||| || ||||||| || ||||    
T  31108252 atttatgtatatgtattttgcggactttgaactttaagtcatttatgactatg--caatttataacatgtatttagctttacttttgttttgttagaatc 31108349  T
Q  283 aatcgattttgattacgaatttacgattt 311  Q
      |||||||||||| ||| ||||||||||    
T  31108350 -ctcgattttgattgcgattttacgattt 31108377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 20399945 - 20399892
Alignment:
Q  334 agttgagtaaaatccttcgattttgattatgattttacgattttcgatttttct 387  Q
    ||||||||||||| |||| ||||| ||| ||||||||| ||||||| |||||||    
T  20399945 agttgagtaaaattcttcaatttttattgtgattttacaattttcgttttttct 20399892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 7223610 - 7223650
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  7223610 aaaatccatcgattttgattgcgattttacgatttcttata 7223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 28669420 - 28669456
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc 217  Q
    ||||||||||||||||||||||||| || ||||||||    
T  28669420 agtcatttatgtataagtattttgtggaatttaaacc 28669456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 219 - 427
Target Start/End: Complemental strand, 93691 - 93483
Alignment:
Q  219 agtcttttatgacta-tatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttata 317  Q
    |||| |||||||||| ||||| ||| ||||||||||||||| | ||||| | ||||||||||||| ||||||||||||| ||| |||||||||| |||||    
T  93691 agtcgtttatgactaatatacgattcataacatatatttagtaatatttgt-ttttggtaaaatccatcgattttgattgcgattttacgatttattata 93593  T
Q  318 tcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattt-tcgatttttctcttccctttcaaccttgaagcaaaatccc 416  Q
    ||||||||  || ||||||||| |||||||||||||||||||||| |||||||| |||| |||||||| |||||  |||| |||| |||||||||| ||     
T  93592 tcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttacaatttgtcgattttgctcttttcttttaacc-tgaagcaaaaccct 93494  T
Q  417 gattttgacaa 427  Q
     ||||||||||    
T  93493 aattttgacaa 93483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 85; Significance: 3e-40; HSPs: 5)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 61272 - 61089
Alignment:
Q  247 acatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaat 346  Q
    ||||||||||| |||||||| ||||||  |||| || |||||||||| |||||| ||||||||||| ||||||||||||  || ||||||| ||||||||    
T  61272 acatatatttaacattatttttgttttaataaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagtagttaagtaaaat 61173  T
Q  347 ccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaacctt 431  Q
     |||||||||||||| |||||||||||||||  ||||| || ||| ||||  ||| ||||||||||||||||||||| |||||||    
T  61172 tcttcgattttgattgtgattttacgattttaaattttacttttctcttttgacc-tgaagcaaaatcccgattttggcaacctt 61089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 370
Target Start/End: Complemental strand, 48620 - 48497
Alignment:
Q  247 acatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaat 346  Q
    ||||||||||| |||||||| ||||| | |||| || ||||||||||||  ||| ||||||| ||||| ||||||||||  || ||||||| ||||||||    
T  48620 acatatatttaacattatttttgtttggataaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaat 48521  T
Q  347 ccttcgattttgattatgatttta 370  Q
    |||||||||||||||  |||||||    
T  48520 ccttcgattttgattgagatttta 48497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 48722 - 48674
Alignment:
Q  180 tagtcatttatgtataagtattttgtagactttaaaccgagtcttttat 228  Q
    ||||||||||||||||| |||||||| |||||||||| |||||| ||||    
T  48722 tagtcatttatgtataattattttgtggactttaaactgagtctgttat 48674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 431
Target Start/End: Complemental strand, 48473 - 48445
Alignment:
Q  403 tgaagcaaaatcccgattttgacaacctt 431  Q
    |||||||||||||||||||||||||||||    
T  48473 tgaagcaaaatcccgattttgacaacctt 48445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 48616 - 48679
Alignment:
Q  188 tatgtataagtattttgtagactttaaac--cgagtcttttatgactatatacaatttataaca 249  Q
    ||||||||||| |||||| ||||||||||   |||||  |||||| ||||||||||||||||||    
T  48616 tatgtataagtgttttgtggactttaaactgagagtcggttatgagtatatacaatttataaca 48679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 8587 - 8796
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatat 318  Q
    |||| ||||||||||||||| ||||||| ||||||||||| |||||||   ||||||||||||| ||||||||||||| ||| ||||| ||||| |||||    
T  8587 agtcatttatgactatataccatttataccatatatttagtattattt---ttttggtaaaatccatcgattttgattgcgattttacaatttcctatat 8683  T
Q  319 cgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccga 418  Q
    |||||||   | | || |||||||||||||||| |||||||||  |||||||||| || |||||||  | ||||||||| ||| ||||| ||| ||||||    
T  8684 cgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacgagttccgattttgttattccctttcgacc-tgaagtaaagtcccga 8782  T
Q  419 ttttgacaaccttg 432  Q
    |||||| |||||||    
T  8783 ttttgagaaccttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 246 - 434
Target Start/End: Complemental strand, 56384 - 56197
Alignment:
Q  246 aacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaa 345  Q
    ||||||||||||| ||| ||| | | ||||||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||  || |||  ||||||||||    
T  56384 aacatatatttagtattttttttttgttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 56285  T
Q  346 tccttcgattttgattatgattttacgat-tttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttgtt 434  Q
    ||||||||||||||||  ||||||| ||| | |||||||| || ||||||||| ||| ||||| ||| || |||||||||||||||||||    
T  56284 tccttcgattttgattgcgatttta-gatgtctcgattttgctattccctttcgacc-tgaagtaaagtctcgattttgacaaccttgtt 56197  T

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Target: scaffold0534 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 179 - 432
Target Start/End: Original strand, 785 - 1025
Alignment:
Q  179 ttagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttct-gttttggta 277  Q
    |||||||||||| ||| ||||||||||  |||||||||  || | || ||||||||||||||||||||       ||||||||| ||| | |||||||||    
T  785 ttagtcatttatctatgagtattttgtgaactttaaactaagccattaatgactatatacaatttata-------tttagcatttttttttgttttggta 877  T
Q  278 aaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgatttt 377  Q
    ||||| ||      ||||| ||| ||||| ||||||||||||  ||||  || |||||||||||||||| ||||||||||||||   |||||||||||||    
T  878 aaatccat------tgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgatttt 971  T
Q  378 cgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    | ||||| |||||||||||  ||| ||||||||||||| |||||| | |||||||    
T  972 caattttgctcttcccttttgacc-tgaagcaaaatcctgattttaaaaaccttg 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 277 - 391
Target Start/End: Complemental strand, 131 - 18
Alignment:
Q  277 aaaatcaatcgattttgattacgaatttacgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattt 376  Q
    |||||| |||||||||||||  || ||||| ||||||||||||||||||  || |||||||||||||||||||||||||||| ||  ||||||||||||     
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctacaa-agtagttgagtaaaatccttcgattttggtttcgattttacgattg 33  T
Q  377 tcgatttttctcttc 391  Q
    |||||||| ||||||    
T  32 tcgattttgctcttc 18  T

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Target: scaffold1178 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 310
Target Start/End: Original strand, 426 - 556
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaa 278  Q
    ||||||||||||||| | |||||||  ||||| |||   ||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||     
T  426 agtcatttatgtatatgcattttgtgcactttgaactttgagtcatttatgactatatgcaatttatatcatatatttagcattatttttgttttggtag 525  T
Q  279 aatcaatcgattttgattacgaatttacgatt 310  Q
    ||||  |||||||||||| ||| |||||||||    
T  526 aatc-ctcgattttgattgcgattttacgatt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 7435 - 7276
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgatttcttatatcgatt 323  Q
    ||||||| ||||||| | ||| ||||||||||||| ||||||  | ||||||||||||  ||||||||||||| ||| | ||| ||||| |||||| |||    
T  7435 tttatgaatatataccaattagaacatatatttagtattattgtt-ttttggtaaaattcatcgattttgattgcgattatacaatttcctatatctatt 7337  T
Q  324 cttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttt 384  Q
    |   || |||| ||||||||||||||||||||||||||| |||||||| | | ||||||||    
T  7336 caacaaaagtacttgagtaaaatccttcgattttgattacgattttacaagtctcgatttt 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 35014 - 34903
Alignment:
Q  180 tagtcatttatgtataagtattttgtagactttaaaccgagtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaa 279  Q
    ||||||||||||||||| |||||||| |||||||||| ||| | ||||||| ||| || ||| |||||||||||| ||||||||||| |||||| |||||    
T  35014 tagtcatttatgtataaatattttgtggactttaaactgagccatttatgattatgtataatatataacatatatgtagcattatttttgtttttgtaaa 34915  T
Q  280 atcaatcgattt 291  Q
    ||| || |||||    
T  34914 atccattgattt 34903  T

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Target: scaffold0028 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 311 - 431
Target Start/End: Original strand, 145823 - 145942
Alignment:
Q  311 tcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaa 410  Q
    |||||||||||||||  || ||||  |||||||||||||||||||||||||   |||||||||||||||||||  || ||  ||||| ||| ||||||||    
T  145823 tcttatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattttcgatttaactattttctttcgacc-tgaagcaa 145921  T
Q  411 aatcccgattttgacaacctt 431  Q
    |||| | ||||||||||||||    
T  145922 aatctcaattttgacaacctt 145942  T

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Target: scaffold0017 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 273
Target Start/End: Complemental strand, 38565 - 38475
Alignment:
Q  185 atttatgtataagtattttgtagactttaaaccg--agtcttttatgactatatacaatttataacatatatttagcattatttctgtttt 273  Q
    ||||||||||| ||||||||| |||||| |||    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  38565 atttatgtatatgtattttgtggactttgaactttaagtcctttatgactatatacaatttataacatatatttatcattatttttgtttt 38475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 270 - 384
Target Start/End: Original strand, 33127 - 33246
Alignment:
Q  270 ttttggtaaaatcaatcgattttgattacgaattta-----cgatttcttatatcgattcttaaatagtagttgagtaaaatccttcgattttgattatg 364  Q
    |||||||| |||||||||||||||||| ||| ||||     || | |||||||||||||||  || ||||  |||||||||| ||||||||||||||  |    
T  33127 ttttggtagaatcaatcgattttgattgcgattttagatttcgctatcttatatcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcg 33226  T
Q  365 attttacgattttcgatttt 384  Q
    ||||||| ||||||||||||    
T  33227 attttacaattttcgatttt 33246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 306
Target Start/End: Complemental strand, 5249 - 5124
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaaccgag-tcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaa 279  Q
    ||||||||||||| | ||||||||| |||||| |||   | || |||||||||| || ||||||||||||||||||||||||||||| |  ||||||| |    
T  5249 agtcatttatgtacatgtattttgtggactttgaactttgatcatttatgactacatgcaatttataacatatatttagcattatttttcatttggtaga 5150  T
Q  280 atcaatcgattttgattacgaatttac 306  Q
    |||  |||||||||||| ||| |||||    
T  5149 atc-ctcgattttgattgcgattttac 5124  T

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Target: scaffold0061 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 76306 - 76257
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgtttt 273  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  76306 tttatgactatatacaatttataacatatatttatcattatttttgtttt 76257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 133149 - 133025
Alignment:
Q  184 catttatgtataagtattttgtagactttaaaccgag-tcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatc 282  Q
    |||||||||||| ||||||||| |||||| |||   | || ||||||||||||| |||||||||||||||||||| ||||| || |||||| ||| ||||    
T  133149 catttatgtatatgtattttgtggactttgaactttggtcatttatgactatatgcaatttataacatatatttaacattaattttgttttagtagaatc 133050  T
Q  283 aatcgattttgattacgaatttacga 308  Q
      | |||||||||| ||| |||||||    
T  133049 -cttgattttgattgcgattttacga 133025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 142722 - 142809
Alignment:
Q  181 agtcatttatgtataagtattttgtagactttaaacc--gagtcttttatgactatatacaatttataacatatatttagcattattt 266  Q
    ||||||||||||||| ||||||| | |||||| |||   || || ||| ||||||||| |||||||||||||||||||||||||||||    
T  142722 agtcatttatgtatatgtattttttggactttgaactttgaatcatttttgactatatgcaatttataacatatatttagcattattt 142809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 18540 - 18619
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacgattt 311  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||| || |||| ||| ||||||||| | | ||||||||||    
T  18540 tatatgcaatttataacatatatttagtattatttttgttttgatagaatccatctattttgattgcaattttacgattt 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 8288 - 8375
Alignment:
Q  219 agtcttttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttacga 308  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||||| | |||||||||| ||||  |||||||||||| ||| |||||||    
T  8288 agtcatttatgactatatgcaatttat-acatatatttagtattatatttgttttggtagaatc-ctcgattttgattgcgattttacga 8375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 2913 - 2994
Alignment:
Q  224 tttatgactatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaatttac 306  Q
    |||||||||| || ||| ||||||||||||||||||||||||| |  ||||||| ||||  |||||||||||| ||| |||||    
T  2913 tttatgactacatgcaaattataacatatatttagcattatttttcatttggtagaatc-ctcgattttgattgcgattttac 2994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 24530 - 24602
Alignment:
Q  232 tatatacaatttataacatatatttagcattatttctgttttggtaaaatcaatcgattttgattacgaattta 305  Q
    ||||| |||||||||||||||||||| |||||||| | |||||||| ||||  |||||||||||| ||| ||||    
T  24530 tatatgcaatttataacatatatttaacattattttttttttggtagaatc-ttcgattttgattgcgatttta 24602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 432
Target Start/End: Original strand, 88 - 183
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||||||||||||||||||||| ||||  ||||||||| |  ||||||| ||  |||||||  | ||||||| ||| |||||||||||| |||||||    
T  88 ttgagtaaaatccttcgattttaattacaattttacgagtcccgattttgctactcccttttga-cttgaagtaaagtcccgattttgataaccttg 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 37103 - 37057
Alignment:
Q  191 gtataagtattttgtagactttaaaccgagtcttttatgactatata 237  Q
    |||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  37103 gtataagtattttgtgtactttaaacggagtcatttatgactatata 37057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 432
Target Start/End: Complemental strand, 14795 - 14700
Alignment:
Q  336 ttgagtaaaatccttcgattttgattatgattttacgattttcgatttttctcttccctttcaaccttgaagcaaaatcccgattttgacaaccttg 432  Q
    |||| |||||||||||||||||||||  |||||||||| |  ||||||| ||  ||| |||| | ||||||| |||  ||||||||||| |||||||    
T  14795 ttgaataaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcga-cttgaagtaaagccccgattttgataaccttg 14700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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