View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15084_low_43 (Length: 203)
Name: NF15084_low_43
Description: NF15084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15084_low_43 |
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Alignment Details
Target: chr6 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 9554852 - 9555022
Alignment:
| Q |
17 |
agagaaaaggaagaaaatgacatctctaatgaaactagctttatcaactgaaacattattggaactaactataaaacttattatgcctaaaacagctgtg |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9554852 |
agagaaaaggaagaaaatgacatctctaatgaaactagctttatcaactgaaacattattggaactaactataaaacttattatgcctaaaacagctgtg |
9554951 |
T |
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| Q |
117 |
gaaacaaaaaatgcaccccccaaaatgctatttaaaccgaccgcgccattgtttgaacttgtgaaagaaac |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9554952 |
gaaacaaaaaatgcaccccccaaaatgctatttaaaccgaccgcgccattgtttgaacttgtgaaagaaac |
9555022 |
T |
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