View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15088_high_12 (Length: 329)

Name: NF15088_high_12
Description: NF15088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15088_high_12
NF15088_high_12
[»] chr4 (19 HSPs)
chr4 (19-316)||(54983662-54983960)
chr4 (205-318)||(50769558-50769674)
chr4 (205-311)||(35383766-35383873)
chr4 (203-307)||(27978905-27979011)
chr4 (275-311)||(2837102-2837138)
chr4 (200-317)||(53924743-53924864)
chr4 (201-310)||(1420532-1420645)
chr4 (207-318)||(51362734-51362851)
chr4 (205-250)||(11824466-11824511)
chr4 (205-311)||(35393871-35393982)
chr4 (195-250)||(3658192-3658248)
chr4 (205-311)||(2653954-2654066)
chr4 (205-316)||(4796037-4796152)
chr4 (201-250)||(14449270-14449319)
chr4 (206-309)||(26089674-26089779)
chr4 (205-250)||(43074617-43074662)
chr4 (207-308)||(8965525-8965629)
chr4 (210-311)||(18937248-18937352)
chr4 (206-316)||(51233674-51233786)
[»] chr3 (26 HSPs)
chr3 (203-311)||(27178139-27178251)
chr3 (207-311)||(4474272-4474378)
chr3 (205-308)||(28204481-28204586)
chr3 (207-311)||(43747282-43747390)
chr3 (205-311)||(14349314-14349421)
chr3 (205-307)||(28712668-28712774)
chr3 (207-311)||(46226892-46226998)
chr3 (205-311)||(47189599-47189708)
chr3 (205-310)||(14340734-14340844)
chr3 (205-311)||(54718995-54719102)
chr3 (228-310)||(3916640-3916723)
chr3 (205-307)||(38958051-38958156)
chr3 (205-308)||(86768-86877)
chr3 (205-311)||(17773171-17773281)
chr3 (205-311)||(19074472-19074582)
chr3 (205-260)||(20432191-20432247)
chr3 (206-250)||(48348257-48348301)
chr3 (203-250)||(19404397-19404444)
chr3 (205-250)||(28944233-28944278)
chr3 (205-250)||(33329612-33329657)
chr3 (205-250)||(53184785-53184830)
chr3 (205-316)||(1814551-1814665)
chr3 (205-316)||(51315681-51315797)
chr3 (205-250)||(14856547-14856592)
chr3 (259-311)||(44436447-44436500)
chr3 (260-311)||(51315553-51315606)
[»] chr2 (22 HSPs)
chr2 (196-316)||(5470322-5470444)
chr2 (205-311)||(34679295-34679403)
chr2 (205-311)||(18709248-18709356)
chr2 (205-316)||(14489409-14489523)
chr2 (205-316)||(31827730-31827844)
chr2 (205-311)||(19206143-19206252)
chr2 (207-311)||(34761062-34761171)
chr2 (222-311)||(4925649-4925739)
chr2 (207-311)||(43028996-43029104)
chr2 (205-311)||(6592936-6593045)
chr2 (207-311)||(6510202-6510310)
chr2 (207-311)||(35718858-35718966)
chr2 (205-260)||(19895614-19895670)
chr2 (205-318)||(44617934-44618050)
chr2 (224-311)||(18224935-18225025)
chr2 (230-307)||(18969125-18969203)
chr2 (207-311)||(37431740-37431848)
chr2 (205-311)||(25333697-25333805)
chr2 (205-310)||(43028795-43028904)
chr2 (239-311)||(44297598-44297673)
chr2 (205-316)||(5470534-5470648)
chr2 (205-250)||(37803400-37803445)
[»] chr6 (13 HSPs)
chr6 (202-311)||(2840787-2840901)
chr6 (205-316)||(3579596-3579711)
chr6 (205-316)||(12766412-12766527)
chr6 (205-316)||(238931-239044)
chr6 (205-311)||(33401257-33401366)
chr6 (207-311)||(1377410-1377517)
chr6 (207-311)||(1385158-1385265)
chr6 (206-311)||(28011328-28011436)
chr6 (211-309)||(18030944-18031043)
chr6 (196-250)||(5003081-5003135)
chr6 (224-311)||(20474907-20474998)
chr6 (205-250)||(30349624-30349669)
chr6 (207-250)||(5607017-5607061)
[»] chr1 (16 HSPs)
chr1 (205-308)||(23220767-23220874)
chr1 (205-308)||(46573032-46573140)
chr1 (205-311)||(39642201-39642312)
chr1 (205-311)||(17760892-17761004)
chr1 (207-311)||(45739138-45739244)
chr1 (205-311)||(25085400-25085510)
chr1 (215-307)||(27864185-27864280)
chr1 (205-316)||(3377502-3377618)
chr1 (206-311)||(23891662-23891771)
chr1 (206-250)||(18632607-18632651)
chr1 (196-250)||(25486480-25486534)
chr1 (202-249)||(16874506-16874553)
chr1 (207-307)||(46912193-46912297)
chr1 (206-275)||(23891873-23891942)
chr1 (256-311)||(17692888-17692944)
chr1 (280-316)||(32295033-32295069)
[»] chr7 (28 HSPs)
chr7 (205-310)||(36580275-36580384)
chr7 (205-310)||(18504444-18504552)
chr7 (207-311)||(20185119-20185226)
chr7 (202-310)||(3247377-3247487)
chr7 (205-307)||(44312746-44312852)
chr7 (205-311)||(4049924-4050034)
chr7 (195-250)||(23826290-23826345)
chr7 (224-311)||(35250322-35250411)
chr7 (205-316)||(36903468-36903580)
chr7 (205-248)||(11373848-11373891)
chr7 (205-311)||(14247295-14247405)
chr7 (207-250)||(23746162-23746205)
chr7 (205-287)||(20505237-20505322)
chr7 (205-250)||(21748082-21748127)
chr7 (205-308)||(25780021-25780126)
chr7 (239-311)||(10097591-10097666)
chr7 (205-318)||(28350117-28350235)
chr7 (208-311)||(28785760-28785869)
chr7 (205-310)||(15107195-15107302)
chr7 (224-311)||(28350346-28350436)
chr7 (205-250)||(6726527-6726572)
chr7 (207-289)||(6792020-6792107)
chr7 (205-309)||(14247509-14247613)
chr7 (206-250)||(15029314-15029356)
chr7 (205-250)||(45697488-45697533)
chr7 (206-250)||(8074143-8074187)
chr7 (224-316)||(15029081-15029178)
chr7 (259-311)||(28472581-28472633)
[»] chr5 (25 HSPs)
chr5 (207-317)||(28446200-28446315)
chr5 (207-311)||(19340767-19340872)
chr5 (196-311)||(35166495-35166615)
chr5 (202-311)||(32391717-32391830)
chr5 (207-250)||(43098031-43098074)
chr5 (205-311)||(36798378-36798489)
chr5 (207-311)||(3333695-3333803)
chr5 (203-311)||(22300814-22300923)
chr5 (205-311)||(43098229-43098337)
chr5 (260-311)||(34320149-34320200)
chr5 (205-311)||(20512401-20512512)
chr5 (205-311)||(2974835-2974947)
chr5 (207-308)||(25364032-25364136)
chr5 (202-250)||(39574237-39574285)
chr5 (207-250)||(3999089-3999132)
chr5 (206-310)||(37897921-37898029)
chr5 (200-311)||(12406037-12406152)
chr5 (205-250)||(24779542-24779587)
chr5 (205-318)||(27904678-27904796)
chr5 (259-311)||(30603671-30603724)
chr5 (206-250)||(25910993-25911037)
chr5 (222-250)||(26702681-26702709)
chr5 (222-250)||(26972414-26972442)
chr5 (205-307)||(35877486-35877592)
chr5 (275-311)||(37897793-37897829)
[»] chr8 (19 HSPs)
chr8 (207-311)||(45456969-45457076)
chr8 (205-307)||(20228232-20228338)
chr8 (207-316)||(27545553-27545666)
chr8 (205-309)||(9762405-9762512)
chr8 (205-311)||(35213032-35213140)
chr8 (205-311)||(17070908-17071018)
chr8 (205-311)||(17577254-17577364)
chr8 (200-305)||(33298545-33298651)
chr8 (205-310)||(41487201-41487311)
chr8 (225-310)||(44269146-44269232)
chr8 (259-311)||(30539047-30539100)
chr8 (205-317)||(20853379-20853494)
chr8 (198-311)||(25144145-25144260)
chr8 (207-250)||(37263361-37263404)
chr8 (204-250)||(521524-521570)
chr8 (205-307)||(6807174-6807279)
chr8 (205-316)||(6807366-6807479)
chr8 (205-310)||(39889773-39889881)
chr8 (207-318)||(41487405-41487520)
[»] scaffold0248 (1 HSPs)
scaffold0248 (203-305)||(617-725)
[»] scaffold0062 (1 HSPs)
scaffold0062 (205-311)||(46077-46188)
[»] scaffold0137 (1 HSPs)
scaffold0137 (224-311)||(20122-20212)
[»] scaffold0194 (1 HSPs)
scaffold0194 (211-250)||(24900-24939)
[»] scaffold0166 (1 HSPs)
scaffold0166 (205-250)||(21925-21970)
[»] scaffold0015 (1 HSPs)
scaffold0015 (278-311)||(77063-77096)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 316
Target Start/End: Original strand, 54983662 - 54983960
Alignment:
Q  19 caataaagagagtagacaaatcttggtgtgtaacaaacaannnnnnnaggggagtatgtgtaacaaacataaaacaagataaacaacttatagtccttta 118  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54983662 caataaagagagtagacaaatcttggtgtgtaacaaacaatttttttaggggagtatgtgtaacaaacataaaacaagataaacaacttatagtcgttta 54983761  T
Q  119 atcaaaaaagataaacaacttattgnnnnnnnaagaagataaacaacttattatctcttgcttaatcctcttatccaataaatt-aagcttaatagcagt 217  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54983762 atcaaaaaagataaacaacttattgtttttttaagaagataaacaacttattatctcttgcttaatcctcttatccaataaatttaagcttaatagcagt 54983861  T
Q  218 ttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaatacaaaacgccccctaagttttacaattgtagcagttttggcccgcaag 316  Q
    || ||||||||||||||||||||| |||||||||| |||||||||| || || ||||||||||||||||||| |||||||||||||||| |||| ||||    
T  54983862 tttcgtcccctaacttttacgaagatgcgatttggccccctaaaaaaaattataaaacgccccctaagttttgcaattgtagcagttttagcccccaag 54983960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 50769674 - 50769558
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagca 301  Q
    |||||| |||||||| || |||||||||||||||||||||||| ||||| |||||||||| ||| || |||| ||||  ||||||||| ||| |||||||    
T  50769674 gcttaaaagcagttttcgccccctaacttttacgaagttgcgattttggccccctaaaaaaaaactataaaaccgcctactaagttttgcaactgtagca 50769575  T
Q  302 gttttggcccgcaagac 318  Q
    |||||||||| ||||||    
T  50769574 gttttggcccccaagac 50769558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 35383766 - 35383873
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaacgccccctaagttttacaattgtagcagt 303  Q
    ||||||||||||||| || ||||||||||| ||||||||| || ||||| |||||||||| || |||||||   |||||||||||| | | ||||||| |    
T  35383766 gcttaatagcagttttcgccccctaactttcacgaagttgtgattttggccccctaaaaaaaactacaaaatcgcccctaagttttgccactgtagcact 35383865  T
Q  304 tttggccc 311  Q
    ||||||||    
T  35383866 tttggccc 35383873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 27979011 - 27978905
Alignment:
Q  203 aagcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagc 300  Q
    |||||||||| || ||| || ||||||||||| |||||||||||| ||||| ||  |||||| || ||||||| || |||||||||||||||| | ||||    
T  27979011 aagcttaataacatttttcgccccctaactttaacgaagttgcgattttggccctttaaaaaaaactacaaaaccgtcccctaagttttacaactctagc 27978912  T
Q  301 agttttg 307  Q
    |||||||    
T  27978911 agttttg 27978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 2837138 - 2837102
Alignment:
Q  275 cgccccctaagttttacaattgtagcagttttggccc 311  Q
    |||||||||||||||||||||||||||||||||||||    
T  2837138 cgccccctaagttttacaattgtagcagttttggccc 2837102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 317
Target Start/End: Original strand, 53924743 - 53924864
Alignment:
Q  200 attaagcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaatt 295  Q
    |||| ||||||||| ||||  || ||||||||||| ||||||||| ||||| | ||||| || | |||   |||||||| | |||||||||||| ||| |    
T  53924743 attaggcttaatagtagttctcgccccctaactttcacgaagttgtgattttgaccccttaagaaaaaaattacaaaaccgtcccctaagttttgcaact 53924842  T
Q  296 gtagcagttttggcccgcaaga 317  Q
    |||||||||||||||| |||||    
T  53924843 gtagcagttttggcccccaaga 53924864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 310
Target Start/End: Original strand, 1420532 - 1420645
Alignment:
Q  201 ttaagcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa--tacaaaa-cgccccctaagttttacaattg 296  Q
    |||| ||||||||||||||  | |||||||||||| | ||||||||| ||||| | |||||||| |||  ||||||| ||||||||||||||| ||| |     
T  1420532 ttaaacttaatagcagttttagccccctaacttttccaaagttgcgattttggcctcctaaaaaaaaaactacaaaaccgccccctaagttttgcaacta 1420631  T
Q  297 tagcagttttggcc 310  Q
    || |||||||||||    
T  1420632 tatcagttttggcc 1420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 51362851 - 51362734
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct------aaaaataaatacaaaacgccccctaagttttacaattgtagc 300  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||| |  ||||      ||||| || ||||||||  || ||||||||| ||| ||||||    
T  51362851 ttaatagcagttttcgtcccctaacttttacaaagttgtgattttgatcccttaagaaaaaaaaaactacaaaaccacctctaagttttgcaactgtagc 51362752  T
Q  301 agttttggcccgcaagac 318  Q
    |||||||| || ||||||    
T  51362751 agttttggtccccaagac 51362734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 11824511 - 11824466
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||| |||||| || |||||||||||||||||||||||||||    
T  11824511 gcttaataacagtttccgccccctaacttttacgaagttgcgattt 11824466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 35393982 - 35393871
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtag 299  Q
    ||||||||||||||| |  ||||||||||| ||||||||||||||| || || |||| || |||   |||||||| |||||||| |||||  || |||||    
T  35393982 gcttaatagcagttttcaccccctaactttcacgaagttgcgattttggacctctaagaaaaaaaactacaaaaccgccccctaggttttgtaactgtag 35393883  T
Q  300 cagttttggccc 311  Q
    ||||||||||||    
T  35393882 cagttttggccc 35393871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 3658248 - 3658192
Alignment:
Q  195 aataaattaagctt-aatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||| || ||||||||||| ||||| |||||||||| |||||||||||||    
T  3658248 aataaattaaggtttaatagcagttttcgtcctctaacttttatgaagttgcgattt 3658192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 2653954 - 2654066
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa----tacaaaa-cgccccctaagttttacaattgta 298  Q
    |||||||||||||||  | | |||||||||||||||||||||| ||||| ||||| || |||||    ||||||| |  | |||||||||| ||| ||||    
T  2653954 gcttaatagcagtttttgcctcctaacttttacgaagttgcgattttggcccccttaagataaaaaactacaaaaccatctcctaagttttgcaactgta 2654053  T
Q  299 gcagttttggccc 311  Q
    |||||||||||||    
T  2654054 gcagttttggccc 2654066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 4796037 - 4796152
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtccc-ctaaaaataaa---tacaaaacgccccctaagttttacaattgtagc 300  Q
    ||||||||||| |||  |||||||||||||| | || ||||||||| | ||| |||| || |||   ||||||||  ||| |||||||| ||| ||||||    
T  4796037 gcttaatagcatttttagtcccctaactttttcaaaattgcgattttggccctctaagaaaaaaaactacaaaaccacccataagttttgcaactgtagc 4796136  T
Q  301 agttttggcccgcaag 316  Q
    ||||||||||| ||||    
T  4796137 agttttggcccccaag 4796152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 14449270 - 14449319
Alignment:
Q  201 ttaagcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||| ||||||||||||| || ||||||||||| ||||||||| |||||    
T  14449270 ttaagtttaatagcagttttcgccccctaactttcacgaagttgagattt 14449319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 26089779 - 26089674
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaatacaaaac-gccccctaagttttacaattgtagcagt 303  Q
    ||||||| |||||| || | | ||| ||||||||||||  ||||| |||| |||||||| || || ||||| || ||||||||||||||| |||| ||||    
T  26089779 cttaataacagttttcgcctcttaatttttacgaagttaagattttggtctcctaaaaaaaactataaaactgctccctaagttttacaactgtaacagt 26089680  T
Q  304 tttggc 309  Q
    ||||||    
T  26089679 tttggc 26089674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 43074617 - 43074662
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||| ||| || ||||||||||| |||||||||||||||    
T  43074617 gcttaatagcaattttcgccccctaactttcacgaagttgcgattt 43074662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 8965525 - 8965629
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagcagt 303  Q
    ||||||| ||||| || ||||| ||||||||||||||| || ||| | |||||||||| ||| ||||||| |||||| |||||||| ||| |||  ||||    
T  8965525 ttaatagaagttttcgcccccttacttttacgaagttgtgattttagccccctaaaaaaaaactacaaaaccgccccttaagttttgcaactgtgccagt 8965624  T
Q  304 tttgg 308  Q
    |||||    
T  8965625 tttgg 8965629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 311
Target Start/End: Original strand, 18937248 - 18937352
Alignment:
Q  210 atagcagtttacgtcccctaacttttacgaagttgcgatttggtcc-cctaaaaataaat-acaaaa-cgccccctaagttttacaattgtagcagtttt 306  Q
    ||||||| || | ||| |||||||| |||||||||| |||| | || |||||||| |||| | |||| || |||||||||||| ||| ||||||||||||    
T  18937248 atagcaggtttcttcctctaactttcacgaagttgcaattttggcctcctaaaaaaaaattataaaatcgtcccctaagttttgcaactgtagcagtttt 18937347  T
Q  307 ggccc 311  Q
    |||||    
T  18937348 ggccc 18937352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 51233786 - 51233674
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaa-gttgcgatttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcagt 303  Q
    |||||||| |||||  | ||| |||||||||| || |||||||||| | |||| ||||| || ||||||| |||||| ||| |||  ||| |||||||||    
T  51233786 cttaatagtagtttttgccccttaacttttacaaaagttgcgattttggccccaaaaaaaaactacaaaatcgccccttaattttggcaactgtagcagt 51233687  T
Q  304 tttggcccgcaag 316  Q
    |||||||| ||||    
T  51233686 tttggcccccaag 51233674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 203 - 311
Target Start/End: Original strand, 27178139 - 27178251
Alignment:
Q  203 aagcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct---aaaaataaatacaaaa-cgccccctaagttttacaattgta 298  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||   |||||||| ||||||| ||| ||||||||||| ||| | ||    
T  27178139 aagcttaatagcagttttcgtcccctaacttttacgaagttgcgatttggccccctaagaaaaataactacaaaaccgcaccctaagttttgcaaatata 27178238  T
Q  299 gcagttttggccc 311  Q
    ||| |||||||||    
T  27178239 gcaattttggccc 27178251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 4474378 - 4474272
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcagtt 304  Q
    ||||||||||||| |  | |||||||||||||||||||||| ||||| |||||||||| || ||||||| ||||| ||||||||| ||| ||||||||||    
T  4474378 ttaatagcagttttctcctcctaacttttacgaagttgcgattttggccccctaaaaaaaattacaaaaccgccctctaagttttgcaactgtagcagtt 4474279  T
Q  305 ttggccc 311  Q
    |||||||    
T  4474278 ttggccc 4474272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 28204481 - 28204586
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcag 302  Q
    ||||||||||||||| || ||| ||||||| |||||||||||| ||||  |||||||||| || ||||||| |||||||||| |||||||| ||||||||    
T  28204481 gcttaatagcagttttcgccccttaactttcacgaagttgcgattttgaccccctaaaaaaaactacaaaatcgccccctaaattttacaactgtagcag 28204580  T
Q  303 ttttgg 308  Q
    ||||||    
T  28204581 ttttgg 28204586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 43747282 - 43747390
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagcag 302  Q
    ||||||||||||| |||||  |||||||||||||||||||| ||||| ||||||  |||| || ||||||| |||||  |||||||| ||||||||||||    
T  43747282 ttaatagcagttttcgtcctataacttttacgaagttgcgattttggccccctaagaaaaaaactacaaaatcgcccaataagttttgcaattgtagcag 43747381  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  43747382 ttttggccc 43747390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 14349421 - 14349314
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaatacaaaac-gccccctaagttttacaattgtagcagt 303  Q
    ||||||||||||||| || |||||||||||||||||||||||||||   ||||  |||| || |||||||| ||| | |||||||| ||| |||| ||||    
T  14349421 gcttaatagcagttttcgccccctaacttttacgaagttgcgattttaaccccctaaaaaaactacaaaactgcctcttaagttttgcaactgtaacagt 14349322  T
Q  304 tttggccc 311  Q
    ||||||||    
T  14349321 tttggccc 14349314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 28712774 - 28712668
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||||||||||||| ||||||| || ||||| ||||||  |||| || ||||||| ||||||||||||||| ||| ||||||    
T  28712774 gcttaatagcagttttcgccccctaacttttatgaagttgtgattttggccccctaagaaaaaaactacaaaatcgccccctaagttttgcaactgtagc 28712675  T
Q  301 agttttg 307  Q
    |||||||    
T  28712674 agttttg 28712668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 46226998 - 46226892
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcagtt 304  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||  |||||||||| || ||||||| || ||| ||| |||| ||| ||||||||||    
T  46226998 ttaatagcagttttcgtcccctaactttcacgaagttgcgattttgaccccctaaaaaaaactacaaaaccgtcccataacttttgcaactgtagcagtt 46226899  T
Q  305 ttggccc 311  Q
    || ||||    
T  46226898 ttagccc 46226892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 47189599 - 47189708
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagca 301  Q
    |||||||| |||||| ||  |||||||||||| |||||||||| ||||| |||||||||| ||| || |||| |||||| |||||||| ||| |||||||    
T  47189599 gcttaataacagttttcgctccctaacttttatgaagttgcgattttggccccctaaaaaaaaactataaaaccgccccttaagttttgcaactgtagca 47189698  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  47189699 gttttggccc 47189708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 14340734 - 14340844
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa---tacaaaa-cgccccctaagttttacaattgtag 299  Q
    ||||||||| ||||| || ||||||||||| |||||||| ||| ||||||||||||  ||||||   ||||||| ||||||  ||||||| |||||||||    
T  14340734 gcttaataggagttttcgccccctaactttcacgaagttacgattttggtcccctacgaataaaaactacaaaaccgccccacaagttttgcaattgtag 14340833  T
Q  300 cagttttggcc 310  Q
    |||||||||||    
T  14340834 cagttttggcc 14340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 54718995 - 54719102
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggt-cccctaaaaataaatacaaaac-gccccctaagttttacaattgtagcag 302  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||| |  |||||||||| || || ||||| | || ||||||||| ||| ||||||||    
T  54718995 gcttaatagcagttttcgtccactaactttcacgaagttgcgattttgaacccctaaaaa-aactataaaaccgtcctctaagttttgcaactgtagcag 54719093  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  54719094 ttttggccc 54719102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 3916723 - 3916640
Alignment:
Q  228 taacttttacgaagttgcgattt-ggtcccctaaaaataaatacaaaacgccccctaagttttacaattgtagcagttttggcc 310  Q
    ||||||||||||||||| ||||| |||| |||||||| || ||||||||   ||||||||||| ||||||||| ||||||||||    
T  3916723 taacttttacgaagttgtgattttggtcacctaaaaaaaactacaaaaccgtccctaagttttgcaattgtagtagttttggcc 3916640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 38958156 - 38958051
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaa-aaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    ||||||||||||||| || ||||||||||| ||||| || ||| ||||  ||||||| ||| || ||||||| ||||||||||||||| ||| |||||||    
T  38958156 gcttaatagcagttttcgccccctaactttcacgaaattacgattttgagcccctaagaaaaaactacaaaaccgccccctaagttttgcaactgtagca 38958057  T
Q  302 gttttg 307  Q
    ||||||    
T  38958056 gttttg 38958051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 86877 - 86768
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct----aaaaataaatacaaaa-cgccccctaagttttacaattgta 298  Q
    ||||||||| ||||| |||||||||||||| | |||||||||| ||||| |||||    ||||| | |||||||| |||| |||||||||| ||| ||||    
T  86877 gcttaataggagttttcgtcccctaactttcatgaagttgcgattttggccccctaagaaaaaaaatatacaaaaccgcctcctaagttttgcaactgta 86778  T
Q  299 gcagttttgg 308  Q
    ||||||||||    
T  86777 gcagttttgg 86768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 17773171 - 17773281
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtc-ccctaa---aaataaatacaaaacgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||||||||||| || |||||||||||| | | ||||||   ||| || ||||||||  |||||||||||| ||| ||| ||    
T  17773171 gcttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaaccgcccctaagttttgcaactgtggc 17773270  T
Q  301 agttttggccc 311  Q
    |||||||||||    
T  17773271 agttttggccc 17773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 19074472 - 19074582
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtc-ccctaa---aaataaatacaaaacgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||||||||||| || |||||||||||| | | ||||||   ||| || ||||||||  |||||||||||| ||| ||| ||    
T  19074472 gcttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaaccgcccctaagttttgcaactgtggc 19074571  T
Q  301 agttttggccc 311  Q
    |||||||||||    
T  19074572 agttttggccc 19074582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 20432191 - 20432247
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaa 260  Q
    |||||||||||||||  | |||||||||||||||||||||||| |||||||||||||    
T  20432191 gcttaatagcagtttttgccccctaacttttacgaagttgcgactttggtcccctaa 20432247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 48348257 - 48348301
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  48348257 cttaatagcagttttcgccccctaacttttacgaagttgcgattt 48348301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 19404397 - 19404444
Alignment:
Q  203 aagcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||||    
T  19404397 aagcttaataacagttttcgtcccctaactttcacgaagttgcgattt 19404444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 28944278 - 28944233
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||    
T  28944278 gcttaatagcagtttttgtcccctaacttttactaagttgcgattt 28944233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 33329612 - 33329657
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||||| || || ||||||||||||||||||||||||    
T  33329612 gcttaatagcagttttcgccctctaacttttacgaagttgcgattt 33329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 53184830 - 53184785
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||    
T  53184830 gcttaatagcagttttcgctccctaacttttacgaagttgcgattt 53184785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 1814551 - 1814665
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta-aaaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    |||| |||| ||||| || |||||||||||||||||||||| | ||| |||||||| |||| || ||||||| | |||| |||||||| ||| | |||||    
T  1814551 gcttcatagtagttttcgccccctaacttttacgaagttgcaattttagtcccctagaaaaaaactacaaaaccaccccttaagttttgcaactatagca 1814650  T
Q  302 gttttggcccgcaag 316  Q
    ||||| |||| ||||    
T  1814651 gtttttgcccccaag 1814665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 51315797 - 51315681
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtag 299  Q
    |||||||||||||||  | |||||||||||  | |||||||||||| || ||||||| || |||   |||||||| |||||||||||||| ||  ||| |    
T  51315797 gcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcacctgtgg 51315698  T
Q  300 cagttttggcccgcaag 316  Q
    |||||||||||| ||||    
T  51315697 cagttttggcccccaag 51315681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 14856547 - 14856592
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||||| ||  |||||||||| |||||||||||||||    
T  14856547 gcttaatagcagttttcgcaccctaactttcacgaagttgcgattt 14856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 44436447 - 44436500
Alignment:
Q  259 aaaaataaatacaaaac-gccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||| || |||||||| |||||||||||||| ||| |||||||||||||||||    
T  44436447 aaaaaaaactacaaaaccgccccctaagttttgcaactgtagcagttttggccc 44436500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 51315553 - 51315606
Alignment:
Q  260 aaaataaat-acaaaac-gccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||||||| ||||||| |||||||||||||| ||| |||||||||||||||||    
T  51315553 aaaataaattacaaaaccgccccctaagttttgcaactgtagcagttttggccc 51315606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 5470322 - 5470444
Alignment:
Q  196 ataaattaagcttaatagcagtttacgtcccctaacttttacgaagttgcgatttgg-tcccctaaaaataaatacaaaac-gccccctaagttttacaa 293  Q
    ||||| |||| ||||||||||||| |||||||| | ||| |||||||||||||||   ||| ||||||| || |||||||| |||||||||||||| |||    
T  5470322 ataaaataagtttaatagcagttttcgtccccttattttcacgaagttgcgatttttatcctctaaaaaaaactacaaaactgccccctaagttttgcaa 5470421  T
Q  294 ttgtagcagttttggcccgcaag 316  Q
    |||||||||||||||||| ||||    
T  5470422 ttgtagcagttttggcccccaag 5470444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 34679403 - 34679295
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaatacaaaac-gccccctaagttttacaattgtagcag 302  Q
    |||||||||||||||  | ||||||||||| ||||||||| ||||| || |||||||||| || |||||||| |||||||||||||| ||| ||||||||    
T  34679403 gcttaatagcagtttttgccccctaactttcacgaagttgtgattttggccccctaaaaaaaactacaaaaccgccccctaagttttgcaactgtagcag 34679304  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  34679303 ttttggccc 34679295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 18709248 - 18709356
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcag 302  Q
    ||||||||||||||| |||||||||||||| |||||||| ||| ||||| | |||||||| || ||||||| | ||||||||||||| ||| | ||||||    
T  18709248 gcttaatagcagttttcgtcccctaactttcacgaagtttcgattttggcctcctaaaaaaaactacaaaatcaccccctaagttttgcaactatagcag 18709347  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  18709348 ttttggccc 18709356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 14489523 - 14489409
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||  |||| || ||||||| | ||||||||||||| ||| ||| |||    
T  14489523 gcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccctaagaaaaaaactacaaaatcaccccctaagttttgcaactgtggca 14489424  T
Q  302 gttttggcccgcaag 316  Q
    |||||||||| ||||    
T  14489423 gttttggcccccaag 14489409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 31827844 - 31827730
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatt-tggtcccctaa-aaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    ||||||||||| ||| || |||||||||||||||||||||||||| ||  | ||||| ||| |||||||||| | ||||||||||||| ||| |||||||    
T  31827844 gcttaatagcaattttcgccccctaacttttacgaagttgcgattatgacctcctaagaaaaaaatacaaaatcaccccctaagttttgcaactgtagca 31827745  T
Q  302 gttttggcccgcaag 316  Q
    |||||||||| ||||    
T  31827744 gttttggcccccaag 31827730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 19206143 - 19206252
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa-tacaaaacg-ccccctaagttttacaattgtagca 301  Q
    ||||||||||| ||| || ||||||| ||| || |||||||||||| || |||||||||| ||| ||||||||  ||||||||||||||||| |||||||    
T  19206143 gcttaatagcaattttcgccccctaattttcacaaagttgcgattttggccccctaaaaaaaaactacaaaaccaccccctaagttttacaactgtagca 19206242  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  19206243 gttttggccc 19206252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 34761171 - 34761062
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct----aaaaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    ||||||||||||| |||||||||||||| |||||||||||||||   | |||    ||||| || ||||||| |||| |||||||||| |||||||||||    
T  34761171 ttaatagcagttttcgtcccctaactttcacgaagttgcgattttaactccttaagaaaaagaactacaaaaccgccacctaagttttgcaattgtagca 34761072  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  34761071 gttttggccc 34761062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 4925739 - 4925649
Alignment:
Q  222 gtcccctaacttttacgaagttgcgatttggtcc-cctaaaaataaatacaaaacgccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||||||||||| ||||||||||||||| | || |||||||| || |||||||   |||||||||||| ||| |||||||||||||||||    
T  4925739 gtcccctaactttcacgaagttgcgattttggcctcctaaaaaaaactacaaaatcgcccctaagttttgcaactgtagcagttttggccc 4925649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 43029104 - 43028996
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtagca 301  Q
    |||||||||||||  | ||| ||||||| || |||||||||||| || ||||||| || |||   |||||||| ||||||||||||||||||||||||||    
T  43029104 ttaatagcagtttttg-cccttaactttcacaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttacaattgtagca 43029006  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  43029005 gttttggccc 43028996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 6593045 - 6592936
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccc--taaaaataaatacaaaac-gccccctaagttttacaattgtagca 301  Q
    |||||| || ||||| || | ||||||||| |||||||||||||||   ||||  |||||| || |||||||| |||||||||||||| ||| |||||||    
T  6593045 gcttaacagtagttttcgccacctaactttcacgaagttgcgattttagcccccttaaaaaaaactacaaaactgccccctaagttttgcaactgtagca 6592946  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  6592945 gttttggccc 6592936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 6510310 - 6510202
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtc-ccctaaaaataaa--tacaaaac-gccccctaagttttacaattgtagcag 302  Q
    ||||||||||||| || || |||||||| | ||||||||||||| | | |||||| || |||  |||||||| |||||||||||||| ||| ||||||||    
T  6510310 ttaatagcagttttcgccctctaactttcatgaagttgcgattttggcaccctaagaaaaaagctacaaaaccgccccctaagttttgcaactgtagcag 6510211  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  6510210 ttttggccc 6510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 35718966 - 35718858
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgat-ttggtcccctaaaaataaa--tacaaaac-gccccctaagttttacaattgtagcag 302  Q
    ||||||||||||| || | ||||||||| ||||||||||||| ||| || ||||| || |||  |||||||| | |||||||||||| ||| ||||||||    
T  35718966 ttaatagcagtttccgcctcctaactttcacgaagttgcgatcttgatctcctaagaaaaaaactacaaaaccgtcccctaagttttgcaactgtagcag 35718867  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  35718866 ttttggccc 35718858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 19895614 - 19895670
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaa 260  Q
    |||||||| |||||| |||||||||||||||||||| |||||| |||||||||||||    
T  19895614 gcttaatatcagttttcgtcccctaacttttacgaaattgcgattttggtcccctaa 19895670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 44618050 - 44617934
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaat-acaaaac-gccccctaagttttacaattgtagca 301  Q
    |||||||||||||||    || |||||||| | ||||||||||||| |||||| ||| || |||| ||||||| |||||||||||||| || |||| |||    
T  44618050 gcttaatagcagttttaaccctctaactttcaagaagttgcgattttggtcccttaagaaaaaattacaaaaccgccccctaagttttgcatttgtggca 44617951  T
Q  302 gttttggcccgcaagac 318  Q
    |||||||||| ||||||    
T  44617950 gttttggcccccaagac 44617934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 18225025 - 18224935
Alignment:
Q  224 cccctaacttttacgaagttgcgatttggtcccctaa-aaataaatacaaaa-cgccccctaagttttacaattgtagca-gttttggccc 311  Q
    |||| |||||||||||||||||||||| | ||||||| ||| || ||||||| |||| | |||||||| ||||||||||| ||||||||||    
T  18225025 cccccaacttttacgaagttgcgattttgacccctaagaaaaaactacaaaatcgcctcttaagttttgcaattgtagcaggttttggccc 18224935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 18969125 - 18969203
Alignment:
Q  230 acttttacgaagttgcgatttgg-tcccctaaaaataaatacaaaacgccccctaagttttacaattgtagcagttttg 307  Q
    ||||||||||||||||||||| | | ||||||||| || ||||||||  |  ||||||||| |||||||||||||||||    
T  18969125 acttttacgaagttgcgattttgatgccctaaaaaaaactacaaaactgcttctaagttttgcaattgtagcagttttg 18969203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 37431848 - 37431740
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagcag 302  Q
    ||||||||||||| || ||||||||||  |||||||||||| ||||| | ||||  |||| || ||||||| |||||| |||||||| ||| |||||||     
T  37431848 ttaatagcagttttcgccccctaacttccacgaagttgcgattttggcctcctaagaaaaaaactacaaaaccgccccttaagttttgcaactgtagcat 37431749  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  37431748 ttttggccc 37431740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 25333805 - 25333697
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccc-taaaaataaatacaaaac-gccccctaagttttacaattgtagcag 302  Q
    ||||||||  ||||| || || |||||||| ||||| ||||||||| | |||| |||||| || |||||||| ||| | |||||||||| | ||||||||    
T  25333805 gcttaataatagttttcgccctctaactttaacgaaattgcgattttgaccccctaaaaaaaactacaaaaccgcctcataagttttaccactgtagcag 25333706  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  25333705 ttttggccc 25333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 43028795 - 43028904
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa---tacaaaacgccccctaagttttacaattgtagc 300  Q
    |||||||||||||||  | |||||||||| | | |||||||||||| || ||||||| || |||   |||||||| ||||||||||||| ||  ||| ||    
T  43028795 gcttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccccccctaagttttgcatctgtggc 43028894  T
Q  301 agttttggcc 310  Q
    ||||||||||    
T  43028895 agttttggcc 43028904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 44297598 - 44297673
Alignment:
Q  239 aagttgcgattt-ggtcccctaaaaataaa-tacaaaac-gccccctaagttttacaattgtagcagttttggccc 311  Q
    |||||||||||| || |||||||||| ||| |||||||| ||||||||||||||  || |||||||||||||||||    
T  44297598 aagttgcgattttggccccctaaaaaaaaactacaaaactgccccctaagttttgtaactgtagcagttttggccc 44297673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 5470648 - 5470534
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa-tacaaaac-gccccctaagttttacaattgtagca 301  Q
    |||| ||||||||||  | |||||||||||    |||||||||||| || |||||||||| ||| |||||||| ||||| |||||||||||  ||| |||    
T  5470648 gctttatagcagttttagccccctaactttcctaaagttgcgattttggccccctaaaaaaaaactacaaaaccgccccttaagttttacatctgtggca 5470549  T
Q  302 gttttggcccgcaag 316  Q
    |||||||||| ||||    
T  5470548 gttttggcccccaag 5470534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 37803445 - 37803400
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||| || ||| || |||||||||||||||||||||||||||    
T  37803445 gcttaataacaattttcgccccctaacttttacgaagttgcgattt 37803400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 2840787 - 2840901
Alignment:
Q  202 taagcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattg 296  Q
    |||||||||||||||||| ||  | | ||||||||| |||||||||||| ||||||||||||| |||   |||||||| | |||||||||||| ||||||    
T  2840787 taagcttaatagcagttttcgctctccaacttttacaaagttgcgattttggtcccctaaaaaaaaaaaatacaaaaccgtcccctaagttttgcaattg 2840886  T
Q  297 tagcagttttggccc 311  Q
    |||||||||||||||    
T  2840887 tagcagttttggccc 2840901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 3579596 - 3579711
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa--tacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| |||||| ||||||| |||||||||||| ||||| ||| |||||| |||  ||||||| ||||||||||||||| ||| ||||||    
T  3579596 gcttaatagcagttttcgtcccttaactttcacgaagttgcgattttggccccgtaaaaaaaaaactacaaaaccgccccctaagttttgcaactgtagc 3579695  T
Q  301 agttttggcccgcaag 316  Q
    | ||||||||| ||||    
T  3579696 acttttggcccccaag 3579711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 12766527 - 12766412
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa--tacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| |  ||||||||||| |||||||||||| ||||| |||||||||| |||  ||||||| |||||| |||||||| ||| ||||||    
T  12766527 gcttaatagcagttttcaccccctaactttcacgaagttgcgattttggccccctaaaaaaaaaactacaaaaccgccccttaagttttgcaactgtagc 12766428  T
Q  301 agttttggcccgcaag 316  Q
    ||||||||||| ||||    
T  12766427 agttttggcccccaag 12766412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 238931 - 239044
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcc-cctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcag 302  Q
    ||||||||||||||| || ||||||| ||| ||||||||||||||| | || |||||||| || ||||||| || |||||||||||| |||  |||||||    
T  238931 gcttaatagcagttttcgccccctaattttcacgaagttgcgattttgacctcctaaaaaaaactacaaaatcgtcccctaagttttgcaaccgtagcag 239030  T
Q  303 ttttggcccgcaag 316  Q
    ||||||||| ||||    
T  239031 ttttggcccccaag 239044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 33401366 - 33401257
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaac-gccccctaagttttacaattgtagca 301  Q
    ||||||||||||||| |  |||||||||||||||||||| ||| |||||  ||||||||| ||| |||||||| | |||||||||||| ||| |||||||    
T  33401366 gcttaatagcagttttcaccccctaacttttacgaagttacgattttggctccctaaaaaaaaactacaaaactgtcccctaagttttgcaactgtagca 33401267  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  33401266 gttttggccc 33401257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 1377517 - 1377410
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtccccta--aaaataaatacaaaac-gccccctaagttttacaattgtagcagt 303  Q
    |||||| |||||| |||||||||||||| ||||||||||||||| | ||||||  |||| || |||||||| |  ||||||||||| ||| |||| ||||    
T  1377517 ttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccctaagaaaaaaactacaaaactgttccctaagttttgcaactgtaacagt 1377418  T
Q  304 tttggccc 311  Q
    ||||||||    
T  1377417 tttggccc 1377410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 1385265 - 1385158
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtccccta--aaaataaatacaaaac-gccccctaagttttacaattgtagcagt 303  Q
    |||||| |||||| |||||||||||||| ||||||||||||||| | ||||||  |||| || |||||||| |  ||||||||||| ||| |||| ||||    
T  1385265 ttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccctaagaaaaaaactacaaaactgttccctaagttttgcaactgtaacagt 1385166  T
Q  304 tttggccc 311  Q
    ||||||||    
T  1385165 tttggccc 1385158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 28011436 - 28011328
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaa---aaataaatacaaaac-gccccctaagttttacaattgtagca 301  Q
    |||||||||||||| |  ||||||||||| ||||||||||||||| ||||| |||   ||| || |||||||| ||||| |||||||| ||| |||||||    
T  28011436 cttaatagcagttttcaccccctaactttcacgaagttgcgattttgtccc-taagagaaaaaactacaaaaccgccccttaagttttgcaactgtagca 28011338  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  28011337 gttttggccc 28011328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 18030944 - 18031043
Alignment:
Q  211 tagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaacgccccctaagttttacaattgtagcagttttggc 309  Q
    ||||||||| |  ||||||||||| |||||||||||| ||||| | |||||||| || |||||||   |||||||||||| ||| ||||||| |||||||    
T  18030944 tagcagttttctccccctaactttcacgaagttgcgattttggcctcctaaaaaaaactacaaaatcgcccctaagttttgcaactgtagcaattttggc 18031043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 5003081 - 5003135
Alignment:
Q  196 ataaattaagcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||  |||||||| |||||| || ||||||||||||| |||||||||||||    
T  5003081 ataaatttggcttaataacagttttcgccccctaacttttaagaagttgcgattt 5003135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 20474998 - 20474907
Alignment:
Q  224 cccctaacttttacgaagttgcgatttggtcccct----aaaaataaatacaaaacgccccctaagttttacaattgtagcagttttggccc 311  Q
    |||||||||||| | |||||||||||| |  ||||    ||||| || |||||||||||||||||||||| ||  ||| |||||||||||||    
T  20474998 cccctaactttttcaaagttgcgattttgatcccttaagaaaaaaaactacaaaacgccccctaagttttgcatctgtggcagttttggccc 20474907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 30349669 - 30349624
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||||  |||||||||||||| | ||||||||||||    
T  30349669 gcttaatagcagtttttgtcccctaactttttcaaagttgcgattt 30349624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 5607061 - 5607017
Alignment:
Q  207 ttaatagcagtttacgtcc-cctaacttttacgaagttgcgattt 250  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||    
T  5607061 ttaatagcagttttcgtccacctaatttttacgaagttgcgattt 5607017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 23220874 - 23220767
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtccccta--aaaataaatacaaaac-gccccctaagttttacaattgtagc 300  Q
    |||| |||||||||| || |||||||||||||||||||| |||||| ||||||||   |||| || |||||||| |||||||||||||||||| ||||||    
T  23220874 gcttgatagcagttttcgccccctaacttttacgaagttacgattttggtcccctctgaaaaaaactacaaaaccgccccctaagttttacaactgtagc 23220775  T
Q  301 agttttgg 308  Q
    ||||||||    
T  23220774 agttttgg 23220767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 46573140 - 46573032
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct---aaaaataaatacaaaac-gccccctaagttttacaattgtag 299  Q
    |||||||||||||||  |||| ||||||||||||||||||||| |||||||||||   ||||| || ||||| || |||||||||||||| ||| |||||    
T  46573140 gcttaatagcagtttttgtcctctaacttttacgaagttgcgattttggtcccctaagaaaaaaaactacaacactgccccctaagttttgcaactgtag 46573041  T
Q  300 cagttttgg 308  Q
    |||||||||    
T  46573040 cagttttgg 46573032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 39642201 - 39642312
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtccc-ctaaaaataaa---tacaaaac-gccccctaagttttacaattgtag 299  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||| | ||| ||||| | |||   |||||||| |||||||||||| | |||||||||    
T  39642201 gcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaaaaactacaaaaccgccccctaagttctgcaattgtag 39642300  T
Q  300 cagttttggccc 311  Q
    ||||||||||||    
T  39642301 cagttttggccc 39642312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 17761004 - 17760892
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct----aaaaataaatacaaaa-cgccccctaagttttacaattgta 298  Q
    ||||||||||||||| |||| | |||||||||||||||||| | |||| ||||||    ||||| || ||||||| |||||| |||||||| ||||||||    
T  17761004 gcttaatagcagttttcgtctcttaacttttacgaagttgcaattttgatcccctaagaaaaaaaaactacaaaaccgccccttaagttttgcaattgta 17760905  T
Q  299 gcagttttggccc 311  Q
    |||||||||||||    
T  17760904 gcagttttggccc 17760892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 45739244 - 45739138
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcc-cctaaaaataaatacaaaac-gccccctaagttttacaattgtagcagtt 304  Q
    ||||||| ||||| |||||  ||||||| ||||||||||||||| | || |||||||| || |||||||| ||||| |||||||| ||| ||||||||||    
T  45739244 ttaatagtagttttcgtcctttaactttcacgaagttgcgattttggcctcctaaaaaaaattacaaaactgccccataagttttgcaactgtagcagtt 45739145  T
Q  305 ttggccc 311  Q
    |||||||    
T  45739144 ttggccc 45739138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 25085400 - 25085510
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct---aaaaataaatacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||||||||||| |  |||||||||||| | |||||   ||||| || ||||||| ||||| ||||||||||||| ||||||    
T  25085400 gcttaatagcagttttcgccccctaactttcataaagttgcgattttgacccctaagaaaaaaaactacaaaaccgccctctaagttttacaactgtagc 25085499  T
Q  301 agttttggccc 311  Q
    | |||||||||    
T  25085500 aattttggccc 25085510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 27864185 - 27864280
Alignment:
Q  215 agtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaac-gcccc-ctaagttttacaattgtagcagttttg 307  Q
    ||||| |||| ||||||||| |||||||||||| |||| ||||||||||| || |||||||| ||||| ||||||||| ||| |||||||||||||    
T  27864185 agttttcgtctcctaactttcacgaagttgcgattttgatcccctaaaaaaaactacaaaactgcccctctaagttttgcaactgtagcagttttg 27864280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 3377502 - 3377618
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct---aaaaataaatacaaaa-cgccccctaagttttacaattgtag 299  Q
    |||||||||||||||  | |||||||||||| | ||||||||| ||||| |||||   ||||| || ||||||| ||||||||||||||| || |||| |    
T  3377502 gcttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtgg 3377601  T
Q  300 cagttttggcccgcaag 316  Q
    |||||||||||| ||||    
T  3377602 cagttttggcccccaag 3377618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 23891662 - 23891771
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    |||||||||||||| ||  |||||||||| ||||||||| || ||||| ||||||  |||| || ||||||| |||||| |||||||| ||| |||||||    
T  23891662 cttaatagcagttttcgctccctaactttcacgaagttgtgattttggccccctaagaaaaaaactacaaaaccgccccttaagttttgcaactgtagca 23891761  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  23891762 gttttggccc 23891771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 18632651 - 18632607
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  18632651 cttaatagcagttttcgccccctaacttttacgaagttgcgattt 18632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 25486534 - 25486480
Alignment:
Q  196 ataaattaagcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||| |||||||||||||||  | ||||||||||| |||||||||||||||    
T  25486534 ataaattaggcttaatagcagtttttgccccctaactttcacgaagttgcgattt 25486480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 16874506 - 16874553
Alignment:
Q  202 taagcttaatagcagtttacgtcccctaacttttacgaagttgcgatt 249  Q
    |||| ||||||||| ||| || ||||||||||||||||||||||||||    
T  16874506 taagtttaatagcaattttcgccccctaacttttacgaagttgcgatt 16874553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 46912193 - 46912297
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtagcag 302  Q
    ||||||||||||| ||  || ||||||| ||||||||||||||| |  | ||||||| |||   |||||||| | |||||||||||| ||||||||| ||    
T  46912193 ttaatagcagttttcgctccttaactttcacgaagttgcgattttggtctctaaaaaaaaaaattacaaaactgtcccctaagttttgcaattgtagaag 46912292  T
Q  303 ttttg 307  Q
    |||||    
T  46912293 ttttg 46912297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 23891942 - 23891873
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaatacaaaac 275  Q
    ||||||||||||||  |||||||||||||| | || || |||||| | |||||||||| || ||||||||    
T  23891942 cttaatagcagttttagtcccctaactttttcaaaattacgattttgacccctaaaaaaaactacaaaac 23891873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 17692944 - 17692888
Alignment:
Q  256 cctaaaaataaatacaaaac-gccccctaagttttacaattgtagcagttttggccc 311  Q
    |||||||| || |||||||| | |||||||||||| ||||||||| |||||||||||    
T  17692944 cctaaaaaaaactacaaaaccgtcccctaagttttgcaattgtagaagttttggccc 17692888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 32295033 - 32295069
Alignment:
Q  280 cctaagttttacaattgtagcagttttggcccgcaag 316  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  32295033 cctaagttttgcaattgtagcagttttggcccacaag 32295069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 36580275 - 36580384
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||||||||||| ||||||||| || ||||||||||||  |||| || ||||||| || |||||||||||| ||| ||||||    
T  36580275 gcttaatagcagttttcggcccctaactttcacgaagttgtgattttggtcccctaagaaaaaaactacaaaaccgtcccctaagttttgcaactgtagc 36580374  T
Q  301 agttttggcc 310  Q
    ||||||||||    
T  36580375 agttttggcc 36580384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 18504552 - 18504444
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagca 301  Q
    |||||||| |||||| |||||||||||||| | |||||||||| |||| ||||||||||| ||| || |||| || ||| |||||||| |||||||||||    
T  18504552 gcttaataacagttttcgtcccctaactttcatgaagttgcgattttgatcccctaaaaaaaaactaaaaaaccgtcccttaagttttgcaattgtagca 18504453  T
Q  302 gttttggcc 310  Q
    |||||||||    
T  18504452 gttttggcc 18504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 20185226 - 20185119
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagcagt 303  Q
    ||||||| ||||| || ||||||||||| |||||||||||| ||||  |||||||||| ||| ||||||| |||| |||||||||| ||| |||||||||    
T  20185226 ttaatagtagttttcgccccctaactttcacgaagttgcgattttgaccccctaaaaaaaaactacaaaaccgcctcctaagttttgcaactgtagcagt 20185127  T
Q  304 tttggccc 311  Q
    ||||||||    
T  20185126 tttggccc 20185119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 310
Target Start/End: Complemental strand, 3247487 - 3247377
Alignment:
Q  202 taagcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtag 299  Q
    ||||||||||| || ||| |||||||||||||| ||||||||| || ||||| ||| |||||| || ||||||| |||| ||||| |||| ||| |||||    
T  3247487 taagcttaataacaattttcgtcccctaactttcacgaagttgtgattttggccccataaaaaaaactacaaaaccgcctcctaaattttgcaactgtag 3247388  T
Q  300 cagttttggcc 310  Q
    |||||||||||    
T  3247387 cagttttggcc 3247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 44312746 - 44312852
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtagc 300  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||| | |||||||||| |||   |||||||| ||  |||||||||| ||| |||| |    
T  44312746 gcttaataacagttttcgtctcctaacttttacgaagttgcgattttgacccctaaaaaaaaatgctacaaaacagcttcctaagttttgcaactgtaac 44312845  T
Q  301 agttttg 307  Q
    |||||||    
T  44312846 agttttg 44312852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 4050034 - 4049924
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||| ||||||| ||||||||| || ||||| ||||||  |||| || ||||||| ||||||||||| ||| ||| ||||||    
T  4050034 gcttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccctaagaaaaaaactacaaaaccgccccctaaggtttgcaactgtagc 4049935  T
Q  301 agttttggccc 311  Q
    |||||||||||    
T  4049934 agttttggccc 4049924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 23826345 - 23826290
Alignment:
Q  195 aataaattaagcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||    
T  23826345 aataaattaggcttaatagcagtttttgtcccctaactttcacgaagttgcgattt 23826290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 35250411 - 35250322
Alignment:
Q  224 cccctaacttttacgaagttgcgatttggtcccc-taaaaataaatacaaaac-gccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||||||||| || |||||||||||| | |||| |||||| || | |||||| |||||||||||||| ||| |||||||||||||||||    
T  35250411 cccctaactttgacaaagttgcgattttgaccccctaaaaaaaactgcaaaactgccccctaagttttgcaactgtagcagttttggccc 35250322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 36903580 - 36903468
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaatacaaaac-gccccctaagttttacaattgtagcagt 303  Q
    |||||||||||||||    |||||||||||| | | |||||||||| | ||| |||||| || |||||||| || ||||||||||| ||| |||||||||    
T  36903580 gcttaatagcagttttaaccccctaactttttcaatgttgcgattttggcccttaaaaaaaactacaaaactgcaccctaagttttgcaactgtagcagt 36903481  T
Q  304 tttggcccgcaag 316  Q
    ||| |||| ||||    
T  36903480 tttagcccccaag 36903468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 11373848 - 11373891
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgat 248  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  11373848 gcttaatagcagttttcgccccctaacttttacgaagttgcgat 11373891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 14247295 - 14247405
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || | ||||||||| ||||||||| || ||||| | ||||  |||| || ||||||| |||||| |||||||| ||||||| ||    
T  14247295 gcttaatagcagttttcgccacctaactttcacgaagttgtgattttggccgcctaagaaaaaaactacaaaaccgccccataagttttgcaattgtggc 14247394  T
Q  301 agttttggccc 311  Q
    |||||||||||    
T  14247395 agttttggccc 14247405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 23746205 - 23746162
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||| || ||||||||||||||||||||||||||||||    
T  23746205 ttaatagcagctttcgtcccctaacttttacgaagttgcgattt 23746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 20505322 - 20505237
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagtt 287  Q
    ||||||||||||||| |  |||||| |||||| |||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||    
T  20505322 gcttaatagcagttttcaccccctagcttttatgaagttgcgattttggccccctaaaaaaaaactacaaaaccgccccctaagtt 20505237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 21748127 - 21748082
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||    
T  21748127 gcttaatagcagttttcgccccctaactttcacgaagttgcgattt 21748082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 25780126 - 25780021
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcag 302  Q
    ||||||||||||| |  |||  |||||||||||||| |||||| ||||| |||||||||| || ||||||| ||||| ||||||| ||||| || |||||    
T  25780126 gcttaatagcagtgttggtcttctaacttttacgaaattgcgattttggacccctaaaaaaaactacaaaatcgcccactaagttctacaactgcagcag 25780027  T
Q  303 ttttgg 308  Q
     |||||    
T  25780026 ctttgg 25780021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 10097591 - 10097666
Alignment:
Q  239 aagttgcgattt-ggtcccctaaaaataaa--tacaaaacgccccctaagttttacaattgtagcagttttggccc 311  Q
    |||||||||||| |||| |||||||| |||  |||||||   |||||||||||| |||||||||||||||||||||    
T  10097591 aagttgcgattttggtcacctaaaaaaaaaactacaaaatcgcccctaagttttgcaattgtagcagttttggccc 10097666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 28350117 - 28350235
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct---aaaaataaatacaaaa-cgccccctaagttttacaattgtag 299  Q
    |||||||||||||||  | ||||||||||| |||||||| ||| ||||| |||||   ||||| || ||||||| ||||||||||||||| |   ||| |    
T  28350117 gcttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcccctgtgg 28350216  T
Q  300 cagttttggcccgcaagac 318  Q
    |||||||||||| ||||||    
T  28350217 cagttttggcccccaagac 28350235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 311
Target Start/End: Original strand, 28785760 - 28785869
Alignment:
Q  208 taatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct----aaaaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    |||||||||||| || ||||||||||| |||||||| ||| ||||| |||||    ||||| || ||||||| ||||||||||||||| ||| ||| | |    
T  28785760 taatagcagtttccgccccctaactttcacgaagttacgattttggccccctaggaaaaaaaaactacaaaaccgccccctaagttttgcaactgttgta 28785859  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  28785860 gttttggccc 28785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 15107302 - 15107195
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaatacaaaac-gccccctaagttttacaattgtagcag 302  Q
    |||||||||||||||    ||||||| |||| | ||||| |||||| || |||||||||| || |||||||| || ||||||||||| || |||| ||||    
T  15107302 gcttaatagcagttttacccccctaatttttccaaagttacgattttggccccctaaaaaaaactacaaaaccgctccctaagttttgcatttgtggcag 15107203  T
Q  303 ttttggcc 310  Q
    ||||||||    
T  15107202 ttttggcc 15107195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 28350436 - 28350346
Alignment:
Q  224 cccctaacttttacgaagttgcga-tttggtcccctaaaaataaa--tacaaaacgccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||||||||| |||||||||||| ||||| ||||||| || |||  ||||||||  |||||||||||| ||  ||| |||||||||||||    
T  28350436 cccctaactttcacgaagttgcgactttggccccctaagaaaaaaactacaaaaccgcccctaagttttgcacctgtggcagttttggccc 28350346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 6726572 - 6726527
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||| ||||  ||||||||||||| |||||||||||||||    
T  6726572 gcttaatagctgtttttgtcccctaactttcacgaagttgcgattt 6726527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 6792107 - 6792020
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct---aaaaataaatacaaaa-cgccccctaagtttt 289  Q
    |||||||||||||  | |||||||||||| | ||||||||| |||||||||||   ||||| || ||||||| |||||||||||||||    
T  6792107 ttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgccccctaagtttt 6792020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 309
Target Start/End: Complemental strand, 14247613 - 14247509
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcagt 303  Q
    |||||||||||||||   ||||||||||||| | |||||||||||| | ||||| |||| || ||||||| || || ||||||||| ||  ||| |||||    
T  14247613 gcttaatagcagtttta-tcccctaacttttccaaagttgcgatttcgaccccttaaaaaaactacaaaaccgtccgctaagttttgcacatgtggcagt 14247515  T
Q  304 tttggc 309  Q
    ||||||    
T  14247514 tttggc 14247509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 15029356 - 15029314
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||    
T  15029356 cttaatagcagttt--gtcccctaacttttacgaagttgtgattt 15029314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 45697488 - 45697533
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||| |||||| ||||||||||||||  ||||||||||||||    
T  45697488 gcttaataacagttttcgtcccctaactttctcgaagttgcgattt 45697533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 8074187 - 8074143
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||| || ||||||||||| |||||||| ||||||    
T  8074187 cttaatagcagttttcgccccctaactttcacgaagttacgattt 8074143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 316
Target Start/End: Original strand, 15029081 - 15029178
Alignment:
Q  224 cccctaacttttacgaagttgcgatttggtcccc----taaaaataaatacaaaac-gccccctaagttttacaattgtagcagttttggcccgcaag 316  Q
    |||||||||||| | |||||||||||| | ||||    |||||| || |||||||| |||||||||||||| ||  ||| ||||||||||||| ||||    
T  15029081 cccctaacttttccaaagttgcgattttgaccccctaataaaaaaaactacaaaaccgccccctaagttttgcacatgtggcagttttggcccccaag 15029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 28472633 - 28472581
Alignment:
Q  259 aaaaataaatacaaaacgccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||| || ||||||||  |||||||||||| ||| |||||||||||||||||    
T  28472633 aaaaaaaactacaaaaccgcccctaagttttgcaactgtagcagttttggccc 28472581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 28446315 - 28446200
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtagca 301  Q
    |||||| |||||| |||||||||| ||||||||| ||| ||||| |||||||||| ||||||   |||||||| | |||||||||||| ||| |||||||    
T  28446315 ttaataacagttttcgtcccctaatttttacgaaattgtgattttggtcccctaagaataaaaactacaaaaccgtcccctaagttttgcaactgtagca 28446216  T
Q  302 gttttggcccgcaaga 317  Q
    |||||||||| |||||    
T  28446215 gttttggcccccaaga 28446200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 19340767 - 19340872
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcagttt 305  Q
    |||||||||||||  | |||||||||||| | || ||||||||| | ||||  |||| || ||||||| ||||||||||||||| ||| |||||||||||    
T  19340767 ttaatagcagttttagccccctaacttttccaaaattgcgattttgaccccctaaaaaaattacaaaatcgccccctaagttttgcaactgtagcagttt 19340866  T
Q  306 tggccc 311  Q
    ||||||    
T  19340867 tggccc 19340872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 311
Target Start/End: Complemental strand, 35166615 - 35166495
Alignment:
Q  196 ataaattaagcttaatagcagtttacgtcccc-taacttttacgaagttgcgattt-ggtcccctaaaaataaa--tacaaaa-cgccccctaagtttta 290  Q
    |||| ||| ||||||||||||||| || |||| ||||||| ||||||||||||||| |||||||||| || |||  ||||||| | |||||||||||||     
T  35166615 ataagttaggcttaatagcagttttcgcccccctaactttcacgaagttgcgattttggtcccctaagaaaaaaactacaaaatcaccccctaagttttg 35166516  T
Q  291 caattgtagcagttttggccc 311  Q
    ||  |||||||||||||||||    
T  35166515 cagctgtagcagttttggccc 35166495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 32391717 - 32391830
Alignment:
Q  202 taagcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa---tacaaaa-cgccccctaagttttacaattgt 297  Q
    |||||||||||||||||| || ||| ||||||| ||||||||| ||||| | ||||| || | |||   ||||||| | ||||||||||||| ||| |||    
T  32391717 taagcttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccttaagaaaaaaactacaaaatcaccccctaagttttgcaactgt 32391816  T
Q  298 agcagttttggccc 311  Q
    ||||||||||||||    
T  32391817 agcagttttggccc 32391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 43098031 - 43098074
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  43098031 ttaatagcagttttcgtcccctaacttttacgaagttgcgattt 43098074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 36798489 - 36798378
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaatac----aaaacgccccctaagttttacaattgtag 299  Q
    |||||||||||||||  | |||||||||||  | |||||||||||| |||||||||| || ||| ||    ||| ||||||||||||||| ||| |||||    
T  36798489 gcttaatagcagttttagccccctaactttctcaaagttgcgattttggtcccctaagaaaaaaaactgcaaaaccgccccctaagttttgcaactgtag 36798390  T
Q  300 cagttttggccc 311  Q
    ||||||||||||    
T  36798389 cagttttggccc 36798378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 3333695 - 3333803
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaatacaaaa-cgccccctaagttttacaattgtagcag 302  Q
    ||||||||||||| || ||||||||||| | |||||||||| |||| |||||||  |||| || ||||||| || || ||||||||| ||| ||||||||    
T  3333695 ttaatagcagttttcgccccctaactttcatgaagttgcgattttgatcccctaagaaaaaaactacaaaaccgtcctctaagttttgcaaatgtagcag 3333794  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  3333795 ttttggccc 3333803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 311
Target Start/End: Complemental strand, 22300923 - 22300814
Alignment:
Q  203 aagcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa-tacaaaacgccccctaagttttacaattgtagca 301  Q
    |||||||||| |||||| || ||||||| ||  ||| ||||||||||| |  |||||| || ||| ||| ||||| |||||||||||| ||| |||||||    
T  22300923 aagcttaataacagttttcgccccctaatttgcacgtagttgcgattttggtccctaagaaaaaactacgaaacgacccctaagttttgcaactgtagca 22300824  T
Q  302 gttttggccc 311  Q
    ||||||||||    
T  22300823 gttttggccc 22300814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 43098337 - 43098229
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaacgccccctaagttttacaattgtagcag 302  Q
    |||||||||||||||  |||||||||||||| | ||||| ||| ||| | |||||||||| ||| ||||||||  | |||||||||| ||  ||||||||    
T  43098337 gcttaatagcagttttagtcccctaactttttcaaagttacgatttttgccccctaaaaaaaaactacaaaaccgcgcctaagttttgcacctgtagcag 43098238  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  43098237 ttttggccc 43098229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 34320200 - 34320149
Alignment:
Q  260 aaaataaatacaaaacgccccctaagttttacaattgtagcagttttggccc 311  Q
    |||| ||||| |||||||||||||||||||||| |||| |||||||||||||    
T  34320200 aaaaaaaatagaaaacgccccctaagttttacatttgtggcagttttggccc 34320149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 20512512 - 20512401
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct----aaaaataaatacaaaa-cgccccctaagttttacaattgtag 299  Q
    ||||||||||||||| || | | ||||||| ||||||||||||||| | |||||    ||||| || ||||||| ||||| ||||||||| ||| | |||    
T  20512512 gcttaatagcagttttcgcctcttaactttcacgaagttgcgattttggcccctaagaaaaaaaaattacaaaatcgccctctaagttttgcaactttag 20512413  T
Q  300 cagttttggccc 311  Q
    ||||||||||||    
T  20512412 cagttttggccc 20512401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 2974947 - 2974835
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccc-----taaaaataaataca-aaacgccccctaagttttacaattgta 298  Q
    |||||||||||||||  | ||||||||||| ||||||||||||||| | ||||      ||||| || |||| || ||||||||||||||| ||  ||||    
T  2974947 gcttaatagcagtttttgccccctaactttcacgaagttgcgattttggccccccaaggaaaaaaaactacagaaccgccccctaagttttgcacctgta 2974848  T
Q  299 gcagttttggccc 311  Q
    |||||||||||||    
T  2974847 gcagttttggccc 2974835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 25364136 - 25364032
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagcagt 303  Q
    ||||||||||||| |  || |||||||| |||||||||| | ||||| |||||||||| ||| ||||||| ||||||||||| ||| |||| ||| ||||    
T  25364136 ttaatagcagttttcaccctctaactttcacgaagttgcaattttggccccctaaaaagaaactacaaaaccgccccctaagatttgcaatagtatcagt 25364037  T
Q  304 tttgg 308  Q
    |||||    
T  25364036 tttgg 25364032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 39574237 - 39574285
Alignment:
Q  202 taagcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||||||| || || |||||||| |||||||||||||||    
T  39574237 taagcttaatagcagttttcgccctctaactttcacgaagttgcgattt 39574285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 3999089 - 3999132
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||||    
T  3999089 ttaatagcagttttcgccccctaactttcacgaagttgcgattt 3999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 37898029 - 37897921
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct---aaaaataaatacaaaacgccccctaagttttacaattgtagca 301  Q
    ||||||||||||||  | |||||||||||| | ||||||||| ||||| |||||   ||||| || ||||||||  |||||||||||| ||  ||| |||    
T  37898029 cttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgcccctaagttttgcatatgtggca 37897930  T
Q  302 gttttggcc 310  Q
    |||||||||    
T  37897929 gttttggcc 37897921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 12406037 - 12406152
Alignment:
Q  200 attaagcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaa-aaataaa--tacaaaa-cgccccctaagttttacaat 294  Q
    |||| |||||||||||||||  | |||||||||||  | ||||||||| ||||| ||||||| ||| |||  ||||||| ||||||||||||||| |||     
T  12406037 attaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaagaaaactacaaaaccgccccctaagttttgcaac 12406136  T
Q  295 tgtagcagttttggccc 311  Q
    |||| ||||||||||||    
T  12406137 tgta-cagttttggccc 12406152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 24779587 - 24779542
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||||| |||||||||||||||| |  ||||||||||    
T  24779587 gcttaatagcagttttcgtcccctaacttttatgctgttgcgattt 24779542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 27904796 - 27904678
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct----aaaaataaatacaaaac-gccccctaagttttacaattgtag 299  Q
    |||||||||||||||  | || ||||||||| | |||||||||||| | ||||     ||||| || |||||||| |||||||||||||| || |||| |    
T  27904796 gcttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaaaaactacaaaaccgccccctaagttttgcacttgtgg 27904697  T
Q  300 cagttttggcccgcaagac 318  Q
    |||||||| ||| ||||||    
T  27904696 cagttttgtcccccaagac 27904678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 30603671 - 30603724
Alignment:
Q  259 aaaaataaatacaaaac-gccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||| || |||||||| |||||||||||||| ||| |||||||||||||||||    
T  30603671 aaaaaaaattacaaaactgccccctaagttttgcaactgtagcagttttggccc 30603724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 25911037 - 25910993
Alignment:
Q  206 cttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||| || ||||||||||| ||||||||| |||||    
T  25911037 cttaatagcagttttcgccccctaactttcacgaagttgagattt 25910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 250
Target Start/End: Complemental strand, 26702709 - 26702681
Alignment:
Q  222 gtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||||||||||||||||||    
T  26702709 gtcccctaacttttacgaagttgcgattt 26702681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 250
Target Start/End: Complemental strand, 26972442 - 26972414
Alignment:
Q  222 gtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||||||||||||||||||    
T  26972442 gtcccctaacttttacgaagttgcgattt 26972414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 35877592 - 35877486
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct---aaaaataaatacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| |  ||||||||||| |||| ||||| |||| | |||||   ||||| || ||||||| ||||||||||||||| ||| |||| |    
T  35877592 gcttaatagcagttttcaccccctaactttcacgaggttgcaattttgacccctaagaaaaaaaactacaaaaccgccccctaagttttgcaactgtaac 35877493  T
Q  301 agttttg 307  Q
     ||||||    
T  35877492 ggttttg 35877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 37897793 - 37897829
Alignment:
Q  275 cgccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  37897793 cgccccctaagttttgcaattgtagctgttttggccc 37897829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 45456969 - 45457076
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa--tacaaaacgccccct-aagttttacaattgtagcagt 303  Q
    |||||| |||||| || ||||||||||||||||||||| ||||| |  ||||||||| |||  ||||||||  ||| | |||||||||||||||||||||    
T  45456969 ttaataacagttttcgccccctaacttttacgaagttgtgattttgatccctaaaaaaaaaactacaaaaccaccctttaagttttacaattgtagcagt 45457068  T
Q  304 tttggccc 311  Q
    ||||||||    
T  45457069 tttggccc 45457076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 20228232 - 20228338
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtagc 300  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||| | |||||||||| |||   |||||||| ||  |||||||||| ||| |||| |    
T  20228232 gcttaataacagttttcgtctcctaacttttacgaagttgcgattttgacccctaaaaaaaaatgctacaaaacagcttcctaagttttgcaactgtaac 20228331  T
Q  301 agttttg 307  Q
    |||||||    
T  20228332 agttttg 20228338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 316
Target Start/End: Complemental strand, 27545666 - 27545553
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa--tacaaaacgc-cccctaagttttacaattgtagcag 302  Q
    |||||||| ||||  | ||||||||| | ||||||||||||||| || ||||||| || |||  ||||||||   |||||||||||||||||||||||||    
T  27545666 ttaatagcggtttttgccccctaactatcacgaagttgcgattttggccccctaagaaaaaaactacaaaactatcccctaagttttacaattgtagcag 27545567  T
Q  303 ttttggcccgcaag 316  Q
    ||||||||| ||||    
T  27545566 ttttggcccccaag 27545553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 309
Target Start/End: Complemental strand, 9762512 - 9762405
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct---aaaaataaatacaaaacgccccctaagttttacaattgtagca 301  Q
    ||||||||||| ||| || | ||||||||||||||||||||||||| | |||||   ||||| || ||||||||   ||||||||||| ||| |||||||    
T  9762512 gcttaatagcaattttcgccacctaacttttacgaagttgcgattttggccccttgaaaaaaaaactacaaaaccgtccctaagttttgcaactgtagca 9762413  T
Q  302 gttttggc 309  Q
     |||||||    
T  9762412 attttggc 9762405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 35213032 - 35213140
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaac-gccccctaagttttacaattgtagcag 302  Q
    |||||||||| |||| || || |||||||| || ||||||||| ||||  |||||||||| || |||||||| ||||| |||||||| ||| |||| |||    
T  35213032 gcttaatagcggttttcgcccactaactttgacaaagttgcgattttgaccccctaaaaaaaactacaaaactgccccttaagttttgcaactgtaacag 35213131  T
Q  303 ttttggccc 311  Q
    |||||||||    
T  35213132 ttttggccc 35213140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 17070908 - 17071018
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa--tacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||| ||||||| |||||||||||| ||||| |||||||||| |||   |||||| |   ||||||||||| ||| ||||||    
T  17070908 gcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaaaaacaacaaaaccattccctaagttttgcaactgtagc 17071007  T
Q  301 agttttggccc 311  Q
    |||||||||||    
T  17071008 agttttggccc 17071018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 17577364 - 17577254
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa--tacaaaa-cgccccctaagttttacaattgtagc 300  Q
    ||||||||||||||| || ||| ||||||| |||||||||||| ||||| |||||||||| |||   |||||| |   ||||||||||| ||| ||||||    
T  17577364 gcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaaaaacaacaaaaccattccctaagttttgcaactgtagc 17577265  T
Q  301 agttttggccc 311  Q
    |||||||||||    
T  17577264 agttttggccc 17577254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 33298651 - 33298545
Alignment:
Q  200 attaagcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgt 297  Q
    |||| |||| |||||||||| || | ||||||||| |||||||||||| ||||| ||||||| || || ||||||| ||||||||||||||| |||  ||    
T  33298651 attatgcttgatagcagttttcgcctcctaactttcacgaagttgcgattttggccccctaagaa-aactacaaaaccgccccctaagttttgcaacagt 33298553  T
Q  298 agcagttt 305  Q
    ||||||||    
T  33298552 agcagttt 33298545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 41487201 - 41487311
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccc-taa-aaataaa--tacaaaac-gccccctaagttttacaattgtag 299  Q
    ||||||||||||||| || |||| || ||| ||||||||||||||| | |||| ||| ||| |||  |||||||| |||||||||||||| ||| |||||    
T  41487201 gcttaatagcagttttcgcccccgaattttcacgaagttgcgattttgaccccctaagaaacaaaactacaaaaccgccccctaagttttgcaactgtag 41487300  T
Q  300 cagttttggcc 310  Q
    |||||||||||    
T  41487301 cagttttggcc 41487311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 44269146 - 44269232
Alignment:
Q  225 ccctaacttttacgaagttgcgatttggtcccctaaaaataaatacaaaa-cgccccctaagttttacaattgtagcagttttggcc 310  Q
    |||||||||||| |||||| | |||| | |||||||||| || ||||||| | ||||||||||||| ||| ||||| ||||||||||    
T  44269146 ccctaacttttatgaagttacaattttgacccctaaaaaaaactacaaaatcaccccctaagttttgcaactgtagtagttttggcc 44269232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 30539047 - 30539100
Alignment:
Q  259 aaaaataaatacaaaac-gccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||| || |||||||| |||||||||||||||||| |||||||||||||||||    
T  30539047 aaaaaaaactacaaaactgccccctaagttttacaactgtagcagttttggccc 30539100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 20853379 - 20853494
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagca 301  Q
    |||||||||||||||  | |||||||||||   |||||||||| ||||  |||||||||| ||| ||||||| | ||||||||||||| ||  ||| |||    
T  20853379 gcttaatagcagttttagccccctaactttcttgaagttgcgattttgaccccctaaaaaaaaactacaaaaccaccccctaagttttgcatatgtggca 20853478  T
Q  302 gttttggcccgcaaga 317  Q
    |||||||||| |||||    
T  20853479 gttttggcccccaaga 20853494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 311
Target Start/End: Complemental strand, 25144260 - 25144145
Alignment:
Q  198 aaattaagcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa-tacaaaacg-ccccctaagttttacaatt 295  Q
    |||||| | ||||||||| ||| || | |||||| || |||||||||||||||   ||||||| || ||| ||||||||  ||||||||||||| |||||    
T  25144260 aaattaggtttaatagcaattttcgcctcctaacattcacgaagttgcgattttagcccctaagaaaaaactacaaaaccaccccctaagttttgcaatt 25144161  T
Q  296 gtagcagttttggccc 311  Q
    || ||| |||||||||    
T  25144160 gttgcaattttggccc 25144145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 37263361 - 37263404
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||| || ||| |||||||||||||||||||||||    
T  37263361 ttaatagcagttttcgccccttaacttttacgaagttgcgattt 37263404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 521524 - 521570
Alignment:
Q  204 agcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    |||||||||||||||| |||||||| |||||||||| |||| |||||    
T  521524 agcttaatagcagttttcgtcccctcacttttacgacgttgtgattt 521570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 6807174 - 6807279
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa--tacaaaacgccccctaagttttacaattgtagca 301  Q
    ||||||||| |||||  | ||| |||||||  |||||||||||||| || ||||||| || |||  |||||| | ||||||||||||| ||| |||||||    
T  6807174 gcttaatagtagtttttgccccataactttctcgaagttgcgattttggccccctaagaaaaaaactacaaaccaccccctaagttttgcaactgtagca 6807273  T
Q  302 gttttg 307  Q
    ||||||    
T  6807274 gttttg 6807279  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 6807479 - 6807366
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtccc-ctaaaaataaatacaaaacg-ccccctaagttttacaattgtagcag 302  Q
    ||||||||||| |||  |||||||||||||  | ||||||| |||| | ||| ||||||| || ||||||||  ||||||||||||| || |||| ||||    
T  6807479 gcttaatagcaattttagtcccctaactttcccaaagttgcaattttgaccctctaaaaaaaactacaaaaccaccccctaagttttgcatttgtggcag 6807380  T
Q  303 ttttggcccgcaag 316  Q
    ||||| ||| ||||    
T  6807379 ttttgtccctcaag 6807366  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 39889773 - 39889881
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccct--aaaaataaatacaaaa-cgccccctaagttttacaattgtagca 301  Q
    ||||||||||||||| || | | ||||||| |||||||||| |||| | |||||  | ||| || ||||||| ||| || |||||||| ||| |||||||    
T  39889773 gcttaatagcagttttcgcctcttaactttcacgaagttgcaattttggccccttaagaaaaaattacaaaatcgctccataagttttgcaactgtagca 39889872  T
Q  302 gttttggcc 310  Q
    |||||||||    
T  39889873 gttttggcc 39889881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 41487520 - 41487405
Alignment:
Q  207 ttaatagcagtttacgtcccctaacttttacgaagttgcgatttggtcccctaaaaataaa---tacaaaac-gccccctaagttttacaattgtagcag 302  Q
    |||||||||||||  | || ||||||||| | ||||||||||||   ||| ||| || |||   |||||||| |||||||||||||| ||| |||||| |    
T  41487520 ttaatagcagttttagccctctaacttttccaaagttgcgattttagcccttaagaaaaaaaactacaaaaccgccccctaagttttgcaactgtagctg 41487421  T
Q  303 ttttggcccgcaagac 318  Q
    ||||||||| ||||||    
T  41487420 ttttggcccccaagac 41487405  T

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Target: scaffold0248 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 305
Target Start/End: Complemental strand, 725 - 617
Alignment:
Q  203 aagcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtcccct----aaaaataaatacaaaa-cgccccctaagttttacaattg 296  Q
    |||||| |||||||||| |||| |||||||||||||||||||||| ||||| |||||    ||||| || ||||||| |||||| |||||||| |||||     
T  725 aagcttcatagcagttttcgtctcctaacttttacgaagttgcgattttggccccctaagaaaaaaaaactacaaaaccgccccttaagttttgcaattc 626  T
Q  297 tagcagttt 305  Q
    |||||||||    
T  625 tagcagttt 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 46077 - 46188
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcga-tttggtccccta--aaaataaa-tacaaaa-cgccccctaagttttacaattgtag 299  Q
    |||| |||||||||| || ||||||||||| |||||||||||| |||   ||||||  |||| ||| ||||||| ||||||||||||||| ||| |||||    
T  46077 gctttatagcagttttcgccccctaactttcacgaagttgcgattttaaccccctaagaaaagaaactacaaaaccgccccctaagttttgcaactgtag 46176  T
Q  300 cagttttggccc 311  Q
    ||||||||||||    
T  46177 cagttttggccc 46188  T

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Target: scaffold0137 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 20212 - 20122
Alignment:
Q  224 cccctaacttttacgaagttgcgattt-ggtcccctaaaaataaa-tacaaaa-cgccccctaagttttacaattgtagcagttttggccc 311  Q
    ||||||| ||||||||||||| ||||| |||| |||||||| ||| ||||||| || ||||||| |||| ||||||||| |||||||||||    
T  20212 cccctaatttttacgaagttgtgattttggtcacctaaaaaaaaactacaaaatcgtcccctaaattttgcaattgtagtagttttggccc 20122  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 24900 - 24939
Alignment:
Q  211 tagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  24900 tagcagttttcgtcccctaacttttacgaagttacgattt 24939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 21970 - 21925
Alignment:
Q  205 gcttaatagcagtttacgtcccctaacttttacgaagttgcgattt 250  Q
    ||||||||||||||| |||||||||||||||| |  ||||||||||    
T  21970 gcttaatagcagttttcgtcccctaacttttatgctgttgcgattt 21925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 77096 - 77063
Alignment:
Q  278 cccctaagttttacaattgtagcagttttggccc 311  Q
    |||||||||||||||| |||||||||||||||||    
T  77096 cccctaagttttacaactgtagcagttttggccc 77063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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