View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15088_high_1_N (Length: 1055)

Name: NF15088_high_1_N
Description: NF15088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15088_high_1_N
NF15088_high_1_N
[»] chr2 (30 HSPs)
chr2 (28-641)||(12268283-12268889)
chr2 (828-1055)||(12268049-12268276)
chr2 (184-297)||(12270163-12270276)
chr2 (769-834)||(1777462-1777527)
chr2 (769-836)||(25979252-25979319)
chr2 (769-825)||(2412429-2412485)
chr2 (769-825)||(23861754-23861810)
chr2 (769-825)||(25977872-25977928)
chr2 (773-827)||(23863055-23863109)
chr2 (769-824)||(36837779-36837834)
chr2 (769-825)||(11087051-11087107)
chr2 (769-825)||(19604920-19604976)
chr2 (769-825)||(30843646-30843702)
chr2 (769-835)||(8809588-8809655)
chr2 (781-824)||(24754171-24754214)
chr2 (772-829)||(1137979-1138036)
chr2 (769-825)||(20245306-20245363)
chr2 (772-837)||(24358890-24358955)
chr2 (769-825)||(1778791-1778847)
chr2 (777-825)||(25282409-25282457)
chr2 (769-825)||(25283273-25283329)
chr2 (779-825)||(3924877-3924923)
chr2 (769-827)||(21573936-21573994)
chr2 (769-835)||(38980195-38980261)
chr2 (772-825)||(4794132-4794185)
chr2 (769-826)||(8810704-8810761)
chr2 (772-825)||(18113091-18113144)
chr2 (795-828)||(29182410-29182443)
chr2 (772-825)||(33575754-33575807)
chr2 (769-834)||(37271732-37271797)
[»] chr3 (40 HSPs)
chr3 (769-837)||(52401007-52401075)
chr3 (769-825)||(4705683-4705739)
chr3 (769-825)||(20489359-20489415)
chr3 (769-825)||(45267307-45267363)
chr3 (769-825)||(48035733-48035789)
chr3 (769-825)||(52403125-52403181)
chr3 (769-828)||(20488365-20488424)
chr3 (772-825)||(20585648-20585701)
chr3 (769-825)||(39820605-39820661)
chr3 (769-825)||(45268571-45268627)
chr3 (769-825)||(53121304-53121360)
chr3 (776-825)||(42446528-42446577)
chr3 (773-825)||(46026078-46026130)
chr3 (769-825)||(48033060-48033116)
chr3 (769-825)||(52708618-52708674)
chr3 (774-825)||(38505585-38505636)
chr3 (773-835)||(9855170-9855232)
chr3 (773-831)||(40477379-40477437)
chr3 (769-822)||(977847-977900)
chr3 (776-825)||(40476223-40476272)
chr3 (769-825)||(3416497-3416553)
chr3 (769-825)||(42447788-42447844)
chr3 (769-825)||(46104345-46104401)
chr3 (769-825)||(47433810-47433866)
chr3 (773-825)||(54437472-54437524)
chr3 (769-824)||(22508738-22508793)
chr3 (781-824)||(42444040-42444083)
chr3 (769-831)||(39819308-39819370)
chr3 (773-835)||(41780813-41780875)
chr3 (769-825)||(976782-976838)
chr3 (769-825)||(32635596-32635652)
chr3 (769-825)||(32637189-32637245)
chr3 (769-825)||(43641145-43641201)
chr3 (769-825)||(46027418-46027474)
chr3 (774-834)||(51004135-51004195)
chr3 (772-824)||(52707539-52707591)
chr3 (771-817)||(20644575-20644621)
chr3 (772-830)||(43441548-43441606)
chr3 (789-834)||(3417813-3417858)
chr3 (772-817)||(8555193-8555238)
[»] chr7 (38 HSPs)
chr7 (769-836)||(41693636-41693703)
chr7 (769-825)||(35212070-35212126)
chr7 (769-831)||(24195603-24195665)
chr7 (769-825)||(17066427-17066483)
chr7 (769-825)||(41694956-41695012)
chr7 (769-831)||(42254954-42255016)
chr7 (769-825)||(13418952-13419008)
chr7 (769-825)||(31848145-31848201)
chr7 (769-824)||(12385708-12385763)
chr7 (769-824)||(38742184-38742239)
chr7 (775-825)||(31489942-31489992)
chr7 (773-825)||(5611512-5611564)
chr7 (769-837)||(28462629-28462697)
chr7 (773-825)||(31853550-31853602)
chr7 (769-825)||(32197910-32197966)
chr7 (777-825)||(39619800-39619848)
chr7 (769-824)||(11217072-11217127)
chr7 (769-824)||(32544775-32544830)
chr7 (774-825)||(36748200-36748250)
chr7 (777-824)||(43066004-43066051)
chr7 (773-835)||(36749252-36749314)
chr7 (772-825)||(32196686-32196739)
chr7 (769-822)||(39618661-39618713)
chr7 (774-830)||(554242-554298)
chr7 (769-825)||(12933421-12933477)
chr7 (769-825)||(24197104-24197160)
chr7 (769-825)||(25046241-25046297)
chr7 (769-825)||(40576768-40576824)
chr7 (769-813)||(42255903-42255947)
chr7 (769-821)||(43869913-43869965)
chr7 (769-824)||(5610159-5610214)
chr7 (772-835)||(25988694-25988757)
chr7 (795-830)||(28263039-28263074)
chr7 (772-831)||(44568635-44568694)
chr7 (795-845)||(8555767-8555817)
chr7 (772-833)||(1614849-1614910)
chr7 (773-838)||(11766906-11766971)
chr7 (769-822)||(25037755-25037808)
[»] chr1 (45 HSPs)
chr1 (769-825)||(46075051-46075107)
chr1 (773-825)||(24609921-24609973)
chr1 (769-830)||(9774889-9774950)
chr1 (769-833)||(11710547-11710611)
chr1 (769-825)||(27262910-27262966)
chr1 (769-825)||(27264217-27264273)
chr1 (769-825)||(39163025-39163081)
chr1 (769-831)||(47038862-47038924)
chr1 (772-825)||(48588965-48589018)
chr1 (772-825)||(48594052-48594105)
chr1 (772-825)||(48598663-48598716)
chr1 (769-825)||(23469970-23470026)
chr1 (769-825)||(24611118-24611174)
chr1 (769-825)||(35721103-35721159)
chr1 (769-825)||(37395635-37395691)
chr1 (769-825)||(50164405-50164461)
chr1 (769-824)||(9774040-9774095)
chr1 (769-832)||(20723689-20723752)
chr1 (769-825)||(11711255-11711310)
chr1 (769-825)||(13074575-13074631)
chr1 (769-825)||(20722474-20722530)
chr1 (769-825)||(24427370-24427426)
chr1 (769-825)||(26863862-26863918)
chr1 (769-825)||(46073887-46073943)
chr1 (779-825)||(2604138-2604184)
chr1 (769-822)||(17976766-17976819)
chr1 (769-822)||(17977560-17977613)
chr1 (769-822)||(27816721-27816774)
chr1 (795-835)||(25658269-25658309)
chr1 (769-825)||(34934748-34934804)
chr1 (769-825)||(35722286-35722342)
chr1 (769-825)||(35911889-35911945)
chr1 (769-825)||(37396841-37396897)
chr1 (772-835)||(33000614-33000677)
chr1 (769-836)||(45290448-45290515)
chr1 (778-825)||(45979506-45979553)
chr1 (772-827)||(51240119-51240174)
chr1 (772-830)||(10631473-10631531)
chr1 (772-822)||(28198435-28198485)
chr1 (779-825)||(48856214-48856260)
chr1 (772-817)||(12360673-12360718)
chr1 (795-832)||(17130051-17130088)
chr1 (772-825)||(24507481-24507534)
chr1 (769-822)||(27815446-27815499)
chr1 (769-825)||(39162825-39162882)
[»] chr6 (24 HSPs)
chr6 (772-830)||(17516159-17516217)
chr6 (769-825)||(17517310-17517366)
chr6 (769-825)||(34998142-34998198)
chr6 (772-825)||(29291361-29291414)
chr6 (772-824)||(1171655-1171707)
chr6 (769-825)||(18810534-18810590)
chr6 (769-825)||(21165248-21165304)
chr6 (769-824)||(3279500-3279555)
chr6 (772-825)||(1974156-1974209)
chr6 (769-830)||(16995448-16995509)
chr6 (769-830)||(25440674-25440735)
chr6 (769-825)||(20393269-20393325)
chr6 (780-832)||(20895953-20896005)
chr6 (769-825)||(20897498-20897554)
chr6 (769-825)||(21953208-21953264)
chr6 (776-836)||(30253547-30253607)
chr6 (769-825)||(34995116-34995172)
chr6 (769-825)||(1972402-1972458)
chr6 (773-825)||(3276369-3276421)
chr6 (772-828)||(13617528-13617584)
chr6 (773-824)||(20391217-20391268)
chr6 (772-825)||(17000281-17000334)
chr6 (795-836)||(19320758-19320799)
chr6 (772-825)||(31198617-31198670)
[»] chr5 (23 HSPs)
chr5 (769-831)||(3936574-3936636)
chr5 (769-828)||(3205103-3205162)
chr5 (769-830)||(27571130-27571191)
chr5 (769-825)||(4565395-4565451)
chr5 (769-825)||(6894011-6894067)
chr5 (773-828)||(15604063-15604117)
chr5 (768-825)||(14809165-14809222)
chr5 (769-825)||(3954054-3954110)
chr5 (769-825)||(31540498-31540554)
chr5 (769-825)||(31541623-31541679)
chr5 (774-825)||(15599767-15599818)
chr5 (773-830)||(34911833-34911890)
chr5 (769-825)||(3938061-3938117)
chr5 (777-825)||(27097314-27097362)
chr5 (774-825)||(27570058-27570109)
chr5 (772-830)||(6912802-6912860)
chr5 (787-825)||(25252643-25252681)
chr5 (769-835)||(25254132-25254198)
chr5 (787-825)||(25316428-25316466)
chr5 (769-835)||(25317922-25317988)
chr5 (772-834)||(40764725-40764787)
chr5 (772-837)||(19565457-19565522)
chr5 (776-825)||(34910595-34910643)
[»] chr8 (37 HSPs)
chr8 (769-830)||(22534723-22534784)
chr8 (769-836)||(10718449-10718516)
chr8 (772-828)||(3483632-3483688)
chr8 (769-825)||(10717123-10717179)
chr8 (773-825)||(14197827-14197879)
chr8 (377-457)||(17032022-17032100)
chr8 (377-457)||(17562458-17562536)
chr8 (773-825)||(28997998-28998050)
chr8 (769-830)||(36588219-36588280)
chr8 (769-825)||(28996836-28996892)
chr8 (770-825)||(45517962-45518017)
chr8 (772-825)||(1420446-1420499)
chr8 (769-830)||(22533314-22533375)
chr8 (772-825)||(39440426-39440479)
chr8 (769-825)||(4182624-4182680)
chr8 (769-825)||(22270945-22271001)
chr8 (769-825)||(22272271-22272327)
chr8 (769-825)||(39439926-39439982)
chr8 (772-835)||(10872907-10872970)
chr8 (772-825)||(3680746-3680799)
chr8 (386-439)||(17030575-17030627)
chr8 (386-439)||(17561011-17561063)
chr8 (769-830)||(45516394-45516455)
chr8 (769-825)||(3031544-3031600)
chr8 (769-825)||(4183980-4184036)
chr8 (773-837)||(27117922-27117986)
chr8 (769-825)||(30124224-30124280)
chr8 (769-825)||(38456731-38456787)
chr8 (769-825)||(38658483-38658539)
chr8 (772-831)||(20984142-20984201)
chr8 (777-824)||(41357375-41357422)
chr8 (773-827)||(38455447-38455501)
chr8 (769-822)||(1376940-1376993)
chr8 (769-822)||(1385556-1385609)
chr8 (772-825)||(4473989-4474042)
chr8 (772-837)||(28346384-28346449)
chr8 (769-830)||(36589388-36589449)
[»] chr4 (38 HSPs)
chr4 (769-825)||(33137229-33137285)
chr4 (769-825)||(3879088-3879144)
chr4 (769-825)||(22204057-22204113)
chr4 (769-825)||(42359347-42359403)
chr4 (769-825)||(54121701-54121757)
chr4 (773-825)||(3880501-3880553)
chr4 (769-833)||(29060883-29060947)
chr4 (773-825)||(32699319-32699371)
chr4 (773-825)||(33134893-33134945)
chr4 (769-825)||(45618287-45618343)
chr4 (769-824)||(17371846-17371901)
chr4 (772-834)||(34659699-34659761)
chr4 (776-829)||(41935078-41935131)
chr4 (769-830)||(55542580-55542641)
chr4 (769-825)||(19674416-19674472)
chr4 (777-825)||(38166497-38166545)
chr4 (769-837)||(42358022-42358090)
chr4 (769-825)||(45619732-45619788)
chr4 (769-808)||(40198593-40198632)
chr4 (769-831)||(16573374-16573436)
chr4 (775-825)||(41933820-41933870)
chr4 (788-825)||(5259171-5259208)
chr4 (772-825)||(19675624-19675677)
chr4 (776-828)||(16916066-16916118)
chr4 (772-835)||(26412182-26412245)
chr4 (771-825)||(4211563-4211617)
chr4 (772-825)||(12152438-12152491)
chr4 (772-825)||(14487804-14487857)
chr4 (772-833)||(14791751-14791812)
chr4 (769-830)||(17281568-17281629)
chr4 (769-830)||(17370070-17370131)
chr4 (772-825)||(23245540-23245593)
chr4 (772-825)||(26412529-26412582)
chr4 (772-833)||(30046737-30046798)
chr4 (772-833)||(30061078-30061139)
chr4 (780-825)||(32698001-32698046)
chr4 (772-833)||(43231334-43231395)
chr4 (772-825)||(46292394-46292447)
[»] scaffold0002 (4 HSPs)
scaffold0002 (769-822)||(344942-344995)
scaffold0002 (773-825)||(374337-374389)
scaffold0002 (773-825)||(345902-345954)
scaffold0002 (780-825)||(376381-376426)
[»] scaffold0562 (1 HSPs)
scaffold0562 (769-825)||(9924-9980)
[»] scaffold0517 (2 HSPs)
scaffold0517 (769-825)||(11523-11579)
scaffold0517 (769-825)||(10317-10373)
[»] scaffold0230 (1 HSPs)
scaffold0230 (769-825)||(432-488)
[»] scaffold0106 (2 HSPs)
scaffold0106 (769-825)||(30908-30964)
scaffold0106 (769-825)||(29731-29787)
[»] scaffold0001 (2 HSPs)
scaffold0001 (769-825)||(120986-121042)
scaffold0001 (769-825)||(119595-119651)
[»] scaffold0095 (1 HSPs)
scaffold0095 (772-825)||(42759-42812)
[»] scaffold0516 (1 HSPs)
scaffold0516 (773-825)||(1140-1192)
[»] scaffold0009 (1 HSPs)
scaffold0009 (769-825)||(202581-202637)
[»] scaffold0765 (1 HSPs)
scaffold0765 (773-824)||(1863-1914)
[»] scaffold0176 (1 HSPs)
scaffold0176 (795-837)||(21686-21728)
[»] scaffold0005 (1 HSPs)
scaffold0005 (772-833)||(47919-47980)


Alignment Details
Target: chr2 (Bit Score: 492; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 28 - 641
Target Start/End: Complemental strand, 12268889 - 12268283
Alignment:
Q  28 acatcatcacaacgcattgttttacttgactaactaccataactcttctagctatttatcttttctgaatctggactaaaattctccagtttgtgatgtt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268889 acatcatcacaacgcattgttttacttgactaactaccataactcttctagctatttatcttttctgaatctggactaaaattctccagtttgtgatgtt 12268790  T
Q  128 ttagattttgcagatgactcacccaaaaagatatttgcattagacctttatttttt-atagcaaacgattctataaaataatttataatttattagtaat 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12268789 ttagattttgcagatgactcacccaaaaagatatttgcattagacctttatttttttatagcaaacgattctataaaataatttataatttattagtaat 12268690  T
Q  227 aaatgaaaatattgatatggggggatgggtagccactactgcatttgtgacttttagtaacactcactcactcaccttgtaacatttgttaaattgttac 326  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268689 aaatgaaaatattgatatggg--------tagccactactgcatttgtgacttttagtaacactcactcactcaccttgtaacatttgttaaattgttac 12268598  T
Q  327 tgctatggtgattttgtaacatttccaaaatgtgtttcatactttgtaagttgtaacaatctttttgttattagtgctttataattttccttttaaatta 426  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268597 tgatatggtgattttgtaacatttccaaaatgtgtttcatactttgtacgttgtaacaatctttttgttattagtgctttataattttccttttaaatta 12268498  T
Q  427 catttcaattttctaactctttaaatttctctcacttccaccttcttctcctcactcaattgtgatcgaaacccagaagcaaaaatggagtgctgttgat 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| || ||    
T  12268497 catttcaattttctaactctttaaatttctctcacttccaccttcttcttctcactcgattgtgatcgaaccccagaagcaaaaatggagtgctattaat 12268398  T
Q  527 tttgagctcgattgttataannnnnnnaaaaagaagatttttatagtgcatcatctttttgctataatttgtttatcaaagaaattttnnnnnnncttaa 626  Q
    ||||||||||||||||||||       ||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||||       |||||    
T  12268397 tttgagctcgattgttataatttttttaaaaagaaattttttatagtgtgtcatctttttgctataatttgtttatcaaagaaattttaaaaaaacttaa 12268298  T
Q  627 atgaaaaattggttt 641  Q
    |||||||||||||||    
T  12268297 atgaaaaattggttt 12268283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 828 - 1055
Target Start/End: Complemental strand, 12268276 - 12268049
Alignment:
Q  828 tttattttaaaatgtcatcgtaagtgtggtattctcatcttgaatgtatcaatatcattaaacaaaacttggaatgaggtttacactaggtgccccatgt 927  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268276 tttattttaaaatgtcattgtaagtgtggtattctcatcttgaatgtatcaatatcattaaacaaaacttggaatgaggtttacactaggtgccccatgt 12268177  T
Q  928 ttgtgcttagtcaaaacatcaaatccttgaaagtcaaacataaggattggaataagaatgtgttcggggacattaacatcaatttccaagtaactaaatc 1027  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  12268176 ttgtgcttagtcaaaacatcaaatccttgaaagtcaaacataaggattggaataagaatgtgttcggggacattaacatcaatttccaagtaactgaata 12268077  T
Q  1028 taaccttcatcaaattcagagtcaaact 1055  Q
     |||||||||||||||||||||||||||    
T  12268076 caaccttcatcaaattcagagtcaaact 12268049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 184 - 297
Target Start/End: Complemental strand, 12270276 - 12270163
Alignment:
Q  184 atagcaaacgattctataaaataatttataatttattagtaataaatgaaaatattgatatggggggatgggtagccactactgcatttgtgacttttag 283  Q
    ||||| ||||||||| |||| ||||||||||||||||   |||||||||||||||| |||||||| ||| ||||||||||||| ||||| |||||||| |    
T  12270276 atagccaacgattctttaaagtaatttataatttattgcaaataaatgaaaatatttatatggggtgattggtagccactactacatttatgactttttg 12270177  T
Q  284 taacactcactcac 297  Q
    ||||||| ||||||    
T  12270176 taacacttactcac 12270163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 769 - 834
Target Start/End: Complemental strand, 1777527 - 1777462
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 834  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  1777527 taccagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagcctttattt 1777462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 769 - 836
Target Start/End: Original strand, 25979252 - 25979319
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 836  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  25979252 taccagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagccttaatttta 25979319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 2412429 - 2412485
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  2412429 taccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 2412485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 23861810 - 23861754
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  23861810 taccagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttag 23861754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 25977928 - 25977872
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  25977928 taccagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttag 25977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 773 - 827
Target Start/End: Original strand, 23863055 - 23863109
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 827  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  23863055 agggatcaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 23863109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 824
Target Start/End: Original strand, 36837779 - 36837834
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||||||||||||||||||||||||| |||||||||| || |||||| ||||||||    
T  36837779 taccagggaccaaaacccaaactcgctatatttgcagagaccaaaaatatatttta 36837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 11087107 - 11087051
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| ||||||||| |||||||||| |||||||||||||| |||| ||||||||||    
T  11087107 taccaaggaccaaaagccaaactcgctatatttgcagggattaaaatcatattttag 11087051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 19604920 - 19604976
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||   ||||||||| |||||| ||||||||||||||||    
T  19604920 taccagggaccaaaacccaaatgagccatatttacagggaccaaaaacatattttag 19604976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 30843702 - 30843646
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||  |||||||||| ||| |||| ||||||||||    
T  30843702 taccagggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttag 30843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 769 - 835
Target Start/End: Complemental strand, 8809655 - 8809588
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgc-agggatcaaaaacatattttagtctttatttt 835  Q
    ||||||||||||||||||||| |||  |||||||| ||||| |||||||||||||||| |||| ||||    
T  8809655 taccagggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttagcctttttttt 8809588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 781 - 824
Target Start/End: Original strand, 24754171 - 24754214
Alignment:
Q  781 aaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  24754171 aaacccaaattcgccatatttgcagggaccaaaaacatatttta 24754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 829
Target Start/End: Complemental strand, 1138036 - 1137979
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctt 829  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||||||    
T  1138036 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagtctt 1137979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 20245306 - 20245363
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaa-catattttag 825  Q
    |||||||||| |||||||||| |||| ||||||||||| |||||||| ||||||||||    
T  20245306 taccagggactaaaacccaaattcgctatatttgcaggaatcaaaaaccatattttag 20245363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 837
Target Start/End: Original strand, 24358890 - 24358955
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| ||| |||||||    
T  24358890 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttagccttcattttaa 24358955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 1778791 - 1778847
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| ||||||||||||||| |||| ||||||||||| | ||||| ||||||||||    
T  1778791 taccaaggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttag 1778847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 777 - 825
Target Start/End: Complemental strand, 25282457 - 25282409
Alignment:
Q  777 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||| |||||||| ||||||| |||||| ||||||||||||||||    
T  25282457 accaaaactcaaactcgacatatttacagggaccaaaaacatattttag 25282409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 25283273 - 25283329
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||| |||||| |||| |||| |||||||||| || ||||||||||||||||    
T  25283273 taccagggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttag 25283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 3924877 - 3924923
Alignment:
Q  779 caaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| |||||||||||||||||||| ||| ||||| ||||||||||    
T  3924877 caaaatccaaactcgccatatttgcaaggagcaaaagcatattttag 3924923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 769 - 827
Target Start/End: Complemental strand, 21573994 - 21573936
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 827  Q
    ||||| |||||||||  |||||| | |||||||||||||| ||||| ||||||||||||    
T  21573994 taccaaggaccaaaaatcaaacttgtcatatttgcagggaccaaaagcatattttagtc 21573936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 769 - 835
Target Start/End: Original strand, 38980195 - 38980261
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    |||||||||| |||||| ||||  | ||||||||||||||  |||| |||||||||| |||||||||    
T  38980195 taccagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctttatttt 38980261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 4794185 - 4794132
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  4794185 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttag 4794132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 826
Target Start/End: Original strand, 8810704 - 8810761
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagt 826  Q
    |||||||||  |||| ||||| |||| |||||||||| || |||||||||||||||||    
T  8810704 taccagggattaaaatccaaattcgctatatttgcagagaccaaaaacatattttagt 8810761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 18113144 - 18113091
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||| | |||||||||||||| ||||| ||||||||||    
T  18113144 cagggactaaaaccaaaactaggcatatttgcagggaccaaaaccatattttag 18113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 828
Target Start/End: Original strand, 29182410 - 29182443
Alignment:
Q  795 catatttgcagggatcaaaaacatattttagtct 828  Q
    |||||||||||||||||||| |||||||||||||    
T  29182410 catatttgcagggatcaaaatcatattttagtct 29182443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 33575807 - 33575754
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  33575807 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttag 33575754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 834
Target Start/End: Complemental strand, 37271797 - 37271732
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 834  Q
    |||||||||| |||||| ||||  | ||||||||||||||  |||| |||||||||| ||||||||    
T  37271797 taccagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctttattt 37271732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 3e-23; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 769 - 837
Target Start/End: Complemental strand, 52401075 - 52401007
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  52401075 taccagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagccttaattttaa 52401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 4705739 - 4705683
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  4705739 taccagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttag 4705683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 20489359 - 20489415
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  20489359 taccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 20489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 45267363 - 45267307
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  45267363 taccagggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttag 45267307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 48035733 - 48035789
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  48035733 taccagggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttag 48035789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 52403125 - 52403181
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  52403125 taccagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 52403181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 769 - 828
Target Start/End: Complemental strand, 20488424 - 20488365
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 828  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  20488424 taccagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttagtct 20488365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 20585648 - 20585701
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  20585648 cagggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttag 20585701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 39820605 - 39820661
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  39820605 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttag 39820661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 45268571 - 45268627
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  45268571 taccagggaccaaaacccaaacttgctatatttgcagggattaaaaacatattttag 45268627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 53121360 - 53121304
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  53121360 taccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 53121304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 776 - 825
Target Start/End: Complemental strand, 42446577 - 42446528
Alignment:
Q  776 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 42446528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 773 - 825
Target Start/End: Complemental strand, 46026130 - 46026078
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  46026130 agggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 46026078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 48033116 - 48033060
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||    
T  48033116 taccagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttag 48033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 52708618 - 52708674
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  52708618 taccagagaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 52708674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 774 - 825
Target Start/End: Original strand, 38505585 - 38505636
Alignment:
Q  774 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  38505585 gggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttag 38505636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 835
Target Start/End: Complemental strand, 9855232 - 9855170
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||||||| |||||||||| |||||| |||||||||||| |||||||||| | |||||||    
T  9855232 agggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttagccattatttt 9855170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 831
Target Start/End: Original strand, 40477379 - 40477437
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    |||||||||||||||||||||  ||||||||||||| ||||| |||||||||| |||||    
T  40477379 agggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttagccttta 40477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 822
Target Start/End: Original strand, 977847 - 977900
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  977847 taccaaggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatattt 977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 776 - 825
Target Start/End: Complemental strand, 40476272 - 40476223
Alignment:
Q  776 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  40476272 gaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 40476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 3416553 - 3416497
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| ||||||| || |||||| |||||||||||| ||||||||||    
T  3416553 taccagggaccaaaaaccaaacttgctatatttacagggatcaaaatcatattttag 3416497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 42447788 - 42447844
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||  || |||||||||| ||||||| ||||||||||    
T  42447788 taccagggaccaaaacccaaactaaccgtatttgcaggaatcaaaagcatattttag 42447844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 46104401 - 46104345
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| ||||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  46104401 taccagggacaaaaactcaaactcgctatatttgcagggaccaaaatcatattttag 46104345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 47433810 - 47433866
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  47433810 taccagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttag 47433866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 54437472 - 54437524
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  54437472 agggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 54437524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 769 - 824
Target Start/End: Complemental strand, 22508793 - 22508738
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||| |||||||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  22508793 taccaaggaccaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 22508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 781 - 824
Target Start/End: Complemental strand, 42444083 - 42444040
Alignment:
Q  781 aaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||||||||| |||||||||||||||| |||||||||||||||    
T  42444083 aaacccaaacttgccatatttgcagggaccaaaaacatatttta 42444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 831
Target Start/End: Complemental strand, 39819370 - 39819308
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    |||||||||||||||  ||||||||| |||||||||||||  |||| |||||||||| |||||    
T  39819370 taccagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttaggcttta 39819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 835
Target Start/End: Original strand, 41780813 - 41780875
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||| ||||||||||| || ||||||  |||||||||||||||||||||| |||| ||||    
T  41780813 agggaccgaaacccaaacttgctatatttttagggatcaaaaacatattttagcctttttttt 41780875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 976838 - 976782
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| |||||  ||| |||| ||||||||||||||||||| ||||||||||    
T  976838 taccagggactaaaacttaaattcgctatatttgcagggatcaaaagcatattttag 976782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 32635652 - 32635596
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||| |||||||||    
T  32635652 taccagggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttag 32635596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 32637189 - 32637245
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||||||||||||||| | |||| |||||| ||||| ||||||||||    
T  32637189 taccaggaaccaaaacccaaactcgctacatttacagggaccaaaagcatattttag 32637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 43641201 - 43641145
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||| || |||||||||| |||||||||||||  |||| ||||||||||    
T  43641201 taccagggaccataatccaaactcgctatatttgcagggactaaaagcatattttag 43641145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 46027418 - 46027474
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||  ||||||||| ||||||||||||| |||||  |||||||||    
T  46027418 taccagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttag 46027474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 774 - 834
Target Start/End: Complemental strand, 51004195 - 51004135
Alignment:
Q  774 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 834  Q
    |||||||||||||||| ||||||||||| |||||   ||||||||||||||| || |||||    
T  51004195 gggaccaaaacccaaattcgccatatttacagggtctaaaaacatattttagcctatattt 51004135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 772 - 824
Target Start/End: Complemental strand, 52707591 - 52707539
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||||||||||| |||| |||| ||||||||| ||| |||||||||||||||    
T  52707591 cagggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 771 - 817
Target Start/End: Complemental strand, 20644621 - 20644575
Alignment:
Q  771 ccagggaccaaaacccaaactcgccatatttgcagggatcaaaaaca 817  Q
    ||||||||||||||| ||||  | |||||||||||||||||||||||    
T  20644621 ccagggaccaaaaccaaaacgagacatatttgcagggatcaaaaaca 20644575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 772 - 830
Target Start/End: Original strand, 43441548 - 43441606
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| ||||    
T  43441548 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttagccttt 43441606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 789 - 834
Target Start/End: Original strand, 3417813 - 3417858
Alignment:
Q  789 actcgccatatttgcagggatcaaaaacatattttagtctttattt 834  Q
    ||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  3417813 actcgccatatttacagggaccaaaaacatattttagccttgattt 3417858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 817
Target Start/End: Original strand, 8555193 - 8555238
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaaca 817  Q
    |||||||||||||| ||||  | |||||||||||||||||||||||    
T  8555193 cagggaccaaaaccaaaacaagacatatttgcagggatcaaaaaca 8555238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 769 - 836
Target Start/End: Complemental strand, 41693703 - 41693636
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 836  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  41693703 taccagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttagcctttaattta 41693636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 35212126 - 35212070
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  35212126 taccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 35212070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 769 - 831
Target Start/End: Complemental strand, 24195665 - 24195603
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  24195665 taccagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccttta 24195603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 17066483 - 17066427
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  17066483 taccagggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttag 17066427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 41694956 - 41695012
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  41694956 taccagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttag 41695012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 769 - 831
Target Start/End: Complemental strand, 42255016 - 42254954
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||| |||||||||| |||||    
T  42255016 taccagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttagccttta 42254954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 13419008 - 13418952
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  13419008 taccagggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttag 13418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 31848145 - 31848201
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||    
T  31848145 taccagggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttag 31848201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 824
Target Start/End: Original strand, 12385708 - 12385763
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||    
T  12385708 taccagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 824
Target Start/End: Complemental strand, 38742239 - 38742184
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  38742239 taccggggaccaaaacccaaactcgctatatttgcagggactaaaaacatatttta 38742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 775 - 825
Target Start/End: Original strand, 31489942 - 31489992
Alignment:
Q  775 ggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  31489942 ggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttag 31489992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 5611512 - 5611564
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  5611512 agggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 5611564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 837
Target Start/End: Original strand, 28462629 - 28462697
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    ||||||||| ||||||||||| ||| ||||||||||| || ||||| ||||||||||| ||| ||||||    
T  28462629 taccagggatcaaaacccaaattcgtcatatttgcagagaccaaaagcatattttagtattttttttaa 28462697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 773 - 825
Target Start/End: Complemental strand, 31853602 - 31853550
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||| |||||||| | ||||||||||||| ||||||||||||||||    
T  31853602 agggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttag 31853550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 32197910 - 32197966
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| ||||||||||||||| |||| ||||||||||||| ||||| ||||||||||    
T  32197910 taccaaggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttag 32197966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 777 - 825
Target Start/End: Original strand, 39619800 - 39619848
Alignment:
Q  777 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttag 39619848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 769 - 824
Target Start/End: Original strand, 11217072 - 11217127
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||||||||||||||  ||||||||| ||||||||||||| ||||| |||||||||    
T  11217072 taccagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 769 - 824
Target Start/End: Original strand, 32544775 - 32544830
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||| ||||||||||||||| |||| ||||||||||||| ||||| |||||||||    
T  32544775 taccaaggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 774 - 825
Target Start/End: Complemental strand, 36748250 - 36748200
Alignment:
Q  774 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  36748250 gggaccaaaacccaaactctc-atatttgcagggaccaaaaacatattttag 36748200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 777 - 824
Target Start/End: Complemental strand, 43066051 - 43066004
Alignment:
Q  777 accaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  43066051 accaaaactcaaactcgctatatttgcagggataaaaaacatatttta 43066004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 835
Target Start/End: Original strand, 36749252 - 36749314
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    |||||||||||| |||||||| ||||||||||  || |||||||||||||||| |||| ||||    
T  36749252 agggaccaaaactcaaactcgtcatatttgcaatgaccaaaaacatattttagcctttttttt 36749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 32196739 - 32196686
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||| |||||  ||| ||||||||||||| ||||||||||||||||    
T  32196739 cagggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttag 32196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 39618713 - 39618661
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||||||||||||||||||||||||||| ||||||  || |||||||||||||    
T  39618713 taccagggaccaaaacccaaactcgccatttttgcataga-caaaaacatattt 39618661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 774 - 830
Target Start/End: Complemental strand, 554298 - 554242
Alignment:
Q  774 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||||||||||||||||| ||||||||||||| ||| |  ||||||||| ||||    
T  554298 gggaccaaaacccaaactcgctatatttgcagggaccaatattatattttagccttt 554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 12933477 - 12933421
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||  ||||||| | ||||||||||||| ||||| ||||||||||    
T  12933477 taccagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttag 12933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 24197104 - 24197160
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  24197104 taccaggaaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 24197160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 25046241 - 25046297
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| ||||||||| | |||||||||||||||||| ||| ||||| ||||||||||    
T  25046241 taccatggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttag 25046297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 40576824 - 40576768
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| |||||||| ||||| ||| |||||||||||||| ||||| ||||||||||    
T  40576824 taccagagaccaaaatccaaattcgtcatatttgcagggaccaaaagcatattttag 40576768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 813
Target Start/End: Original strand, 42255903 - 42255947
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaa 813  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||    
T  42255903 taccagggaccaaaactcaaactcgtcatatttgcagggaccaaa 42255947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 821
Target Start/End: Original strand, 43869913 - 43869965
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatt 821  Q
    ||||||||||||||||||||| | || ||||||||||||| ||||| ||||||    
T  43869913 taccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 824
Target Start/End: Complemental strand, 5610214 - 5610159
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||||| ||| |||||||||| |||  ||||||||||||||||||| |||||||||    
T  5610214 taccagagactaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 5610159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 835
Target Start/End: Original strand, 25988694 - 25988757
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||||    
T  25988694 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatttt 25988757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 795 - 830
Target Start/End: Original strand, 28263039 - 28263074
Alignment:
Q  795 catatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||||||||||||||||| |||||||||||||||    
T  28263039 catatttgcagggatcaaaaccatattttagtcttt 28263074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 831
Target Start/End: Original strand, 44568635 - 44568694
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| |||||    
T  44568635 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttagccttta 44568694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 795 - 845
Target Start/End: Original strand, 8555767 - 8555817
Alignment:
Q  795 catatttgcagggatcaaaaacatattttagtctttattttaaaatgtcat 845  Q
    ||||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  8555767 catatttgcagggactaaaaccatattttagcctttattttaaaatatcat 8555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 833
Target Start/End: Original strand, 1614849 - 1614910
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  1614849 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 1614910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 773 - 838
Target Start/End: Complemental strand, 11766971 - 11766906
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaaa 838  Q
    |||||| |||||| ||||  | |||||||||||||| ||||| ||||||||| ||||| |||||||    
T  11766971 agggacgaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttaatcttttttttaaa 11766906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 25037808 - 25037755
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    |||||||||||||||  |||||||| ||||||||||||||  |||| |||||||    
T  25037808 taccagggaccaaaattcaaactcgtcatatttgcagggactaaaatcatattt 25037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 7e-21; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 46075051 - 46075107
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46075051 taccagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 46075107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 773 - 825
Target Start/End: Complemental strand, 24609973 - 24609921
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24609973 agggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttag 24609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 769 - 830
Target Start/End: Original strand, 9774889 - 9774950
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  9774889 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagccttt 9774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 833
Target Start/End: Complemental strand, 11710611 - 11710547
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    |||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| |||||||    
T  11710611 taccagggaccaaaacccaacctcgttatatttacagggatcaaaaacatattttagcctttatt 11710547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 27262966 - 27262910
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  27262966 taccagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttag 27262910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 27264217 - 27264273
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  27264217 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 27264273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 39163025 - 39163081
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  39163025 taccagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttag 39163081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 769 - 831
Target Start/End: Complemental strand, 47038924 - 47038862
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    ||||||||||||||||||||||| || |||||||||||||  ||||||||||||||| |||||    
T  47038924 taccagggaccaaaacccaaactagctatatttgcagggactaaaaacatattttagccttta 47038862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 48588965 - 48589018
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  48588965 cagggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttag 48589018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 48594052 - 48594105
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  48594052 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttag 48594105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 48598663 - 48598716
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  48598663 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttag 48598716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 23469970 - 23470026
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  23469970 taccagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttag 23470026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 24611118 - 24611174
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| |||||||| ||||||| |||||| ||||||||||||||||    
T  24611118 taccagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttag 24611174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 35721159 - 35721103
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||    
T  35721159 taccagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttag 35721103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 37395691 - 37395635
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  37395691 taccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 37395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 50164461 - 50164405
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  50164461 taccaaggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttag 50164405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 824
Target Start/End: Complemental strand, 9774095 - 9774040
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  9774095 taccagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 832
Target Start/End: Original strand, 20723689 - 20723752
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttat 832  Q
    |||||||||| ||||| |||| |||| ||||||||||||| |||||||||||||||| ||||||    
T  20723689 taccagggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcctttat 20723752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 11711255 - 11711310
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||    
T  11711255 taccagggaccaaa-cccaaattcgctatatttgcagggaccaaaaacatattttag 11711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 13074575 - 13074631
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| |||||||| |||||||||||| | |||||| |||||||||    
T  13074575 taccagggaccaaaactcaaactcgtcatatttgcaggaaccaaaaatatattttag 13074631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 20722530 - 20722474
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||| || |||||||    
T  20722530 taccagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttag 20722474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 24427370 - 24427426
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| ||||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  24427370 taccagggactaaaactcaaactcgctatatttgtagggaccaaaaacatattttag 24427426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 26863918 - 26863862
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| |||| |||| ||||||||||||| |||||||| |||||||    
T  26863918 taccagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttag 26863862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 46073943 - 46073887
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| |||||||||| | || ||||||||||||||||||| ||||||||||    
T  46073943 taccagggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttag 46073887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 2604138 - 2604184
Alignment:
Q  779 caaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||    
T  2604138 caaaacccaaactccccatatttgcagggactaaaaacatattttag 2604184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 17976819 - 17976766
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||||| |||||||    
T  17976819 taccagggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatattt 17976766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 822
Target Start/End: Original strand, 17977560 - 17977613
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||| ||||||||||||||| |||| ||||||||||||| ||||| |||||||    
T  17977560 taccaaggaccaaaacccaaattcgctatatttgcagggaccaaaaccatattt 17977613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 822
Target Start/End: Original strand, 27816721 - 27816774
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||||||||||||||||||| | || ||||||||||||| ||||| |||||||    
T  27816721 taccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 795 - 835
Target Start/End: Original strand, 25658269 - 25658309
Alignment:
Q  795 catatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  25658269 catatttgcagggatcaaaagaatattttagtctttatttt 25658309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 34934748 - 34934804
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| ||||||||||||||| |||| |||||||||||||  |||| ||||||||||    
T  34934748 taccaaggaccaaaacccaaattcgctatatttgcagggacaaaaagcatattttag 34934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 35722286 - 35722342
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| |||||||| ||||| |||| |||||| |||||| ||||||||||||||||    
T  35722286 taccagagaccaaaatccaaattcgctatatttacagggaccaaaaacatattttag 35722342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 35911889 - 35911945
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| ||||||||| ||||| |||| ||||||||||||| ||||| ||||||||||    
T  35911889 taccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 35911945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 37396841 - 37396897
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| |||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  37396841 taccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 37396897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 835
Target Start/End: Original strand, 33000614 - 33000677
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||||    
T  33000614 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctttatttt 33000677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 836
Target Start/End: Complemental strand, 45290515 - 45290448
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 836  Q
    |||||||||| |||||| ||||  | ||||||||||||||  |||| |||||||||| ||||||||||    
T  45290515 taccagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctttatttta 45290448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Original strand, 45979506 - 45979553
Alignment:
Q  778 ccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 45979553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 827
Target Start/End: Complemental strand, 51240174 - 51240119
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 827  Q
    |||||| ||||| ||||| |||| |||||||||| || ||||||||||||||||||    
T  51240174 cagggatcaaaatccaaattcgctatatttgcagagaccaaaaacatattttagtc 51240119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 772 - 830
Target Start/End: Original strand, 10631473 - 10631531
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| |||||||||| ||||    
T  10631473 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagccttt 10631531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 772 - 822
Target Start/End: Complemental strand, 28198485 - 28198435
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||||||||||  ||||||||||||||||||| ||| |||||||| ||||    
T  28198485 cagggaccaaaattcaaactcgccatatttgcaaggaacaaaaacacattt 28198435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 48856260 - 48856214
Alignment:
Q  779 caaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||||||    
T  48856260 caaaacctaaactcaccatatttgcaaggattaaaaacatattttag 48856214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 817
Target Start/End: Complemental strand, 12360718 - 12360673
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaaca 817  Q
    |||||||||||||| ||||  | |||||||||||||||||||||||    
T  12360718 cagggaccaaaaccaaaacgggacatatttgcagggatcaaaaaca 12360673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Original strand, 17130051 - 17130088
Alignment:
Q  795 catatttgcagggatcaaaaacatattttagtctttat 832  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  17130051 catatttgcagggaccaaaaccatattttagtctttat 17130088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 24507534 - 24507481
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  24507534 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttag 24507481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 27815499 - 27815446
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||||||||||||||||||| | || ||||||||||||| || || |||||||    
T  27815499 taccagggaccaaaacccaaattggctatatttgcagggaccagaaccatattt 27815446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 39162882 - 39162825
Alignment:
Q  769 taccagggaccaaaacccaaactcgcca-tatttgcagggatcaaaaacatattttag 825  Q
    ||||| ||||||||| |||||||||||| |||||||||||| ||||| |||| |||||    
T  39162882 taccaaggaccaaaatccaaactcgccattatttgcagggaccaaaagcataatttag 39162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 1e-19; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 772 - 830
Target Start/End: Complemental strand, 17516217 - 17516159
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  17516217 cagggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttagtcttt 17516159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 17517310 - 17517366
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17517310 taccagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttag 17517366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 34998142 - 34998198
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34998142 taccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttag 34998198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 29291414 - 29291361
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  29291414 cagggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttag 29291361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 772 - 824
Target Start/End: Original strand, 1171655 - 1171707
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  1171655 cagggaccaaaaaccaaactcgttatatttgcagggatcaaaaacatatttta 1171707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 18810590 - 18810534
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  18810590 taccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 18810534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 21165304 - 21165248
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  21165304 taccagggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttag 21165248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 824
Target Start/End: Original strand, 3279500 - 3279555
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  3279500 taccaggaaccaaaattcaaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 1974156 - 1974209
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||    
T  1974156 cagggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttag 1974209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 830
Target Start/End: Complemental strand, 16995509 - 16995448
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||||||||||||||||| ||   ||||||||||||| |||||||||||||||| ||||    
T  16995509 taccagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttagccttt 16995448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 830
Target Start/End: Original strand, 25440674 - 25440735
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||||||||||||  ||||||||||||||||| | ||| |||||| ||||||||||||||    
T  25440674 taccagggaccaaaattcaaactcgccatatttgtaaggaccaaaaatatattttagtcttt 25440735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 20393269 - 20393325
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||  ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  20393269 taccagggactgaaacccaaattcgctatatttgcagggatcaaaagcatattttag 20393325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 780 - 832
Target Start/End: Complemental strand, 20896005 - 20895953
Alignment:
Q  780 aaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttat 832  Q
    ||||| |||| |||| ||||||||||||| |||||||||||||||||||||||    
T  20896005 aaaactcaaattcgctatatttgcagggaccaaaaacatattttagtctttat 20895953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 20897498 - 20897554
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| || | ||||||||||||| ||||| ||||||||||    
T  20897498 taccagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttag 20897554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 21953264 - 21953208
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| ||||| |||| ||||||||||||| ||||| ||||||||||    
T  21953264 taccagggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 21953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 776 - 836
Target Start/End: Original strand, 30253547 - 30253607
Alignment:
Q  776 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 836  Q
    ||||||||| || ||||||  |||||||||||| ||||||||||||||||||||| |||||    
T  30253547 gaccaaaactcatactcgctgtatttgcagggaccaaaaacatattttagtctttttttta 30253607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 34995172 - 34995116
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||||| |||| |||| ||||||||||||||||||| ||||||||||    
T  34995172 taccaggaaccaaaactcaaattcgctatatttgcagggatcaaaagcatattttag 34995116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 1972458 - 1972402
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| ||| |||||||||| ||||  |||||||||||| ||||||||||||||||    
T  1972458 taccagagactaaaacccaaattcgctttatttgcagggaccaaaaacatattttag 1972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 773 - 825
Target Start/End: Complemental strand, 3276421 - 3276369
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| |||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  3276421 agggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttag 3276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 772 - 828
Target Start/End: Complemental strand, 13617584 - 13617528
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 828  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  13617584 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagtct 13617528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 824
Target Start/End: Complemental strand, 20391268 - 20391217
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||||||||||||||| || | ||||||||||||| ||||| |||||||||    
T  20391268 agggaccaaaacccaaattcactatatttgcagggaccaaaagcatatttta 20391217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 17000281 - 17000334
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| | | ||||||||||| |||||  |||||||||    
T  17000281 cagggaccaaaacccaaactcactacatttgcagggaccaaaagtatattttag 17000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 836
Target Start/End: Complemental strand, 19320799 - 19320758
Alignment:
Q  795 catatttgcagggatcaaaaacatattttagtctttatttta 836  Q
    |||||||||||||| ||||| |||||||||||| ||||||||    
T  19320799 catatttgcagggaccaaaaccatattttagtcattatttta 19320758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 31198670 - 31198617
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| ||||||||||    
T  31198670 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 31198617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 1e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 831
Target Start/End: Complemental strand, 3936636 - 3936574
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  3936636 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccttta 3936574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 769 - 828
Target Start/End: Original strand, 3205103 - 3205162
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 828  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  3205103 taccagggaccaaaacccaaactcatcatatttgcagggatcaaaagcatattttagtct 3205162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 769 - 830
Target Start/End: Original strand, 27571130 - 27571191
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  27571130 taccagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttagccttt 27571191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 4565451 - 4565395
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||||||||||||||    
T  4565451 taccagggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttag 4565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 6894011 - 6894067
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||| ||||||| |||||||||| ||| ||||||||||||||||    
T  6894011 taccagggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttag 6894067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 773 - 828
Target Start/End: Original strand, 15604063 - 15604117
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 828  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  15604063 agggaccaaaacccaaactcgccatatttgca-ggaccaaaaacacattttagtct 15604117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 768 - 825
Target Start/End: Complemental strand, 14809222 - 14809165
Alignment:
Q  768 ctaccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||| ||||||||||| ||||| |||| ||||||| ||||||||||||||||||||||    
T  14809222 ctactagggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 3954110 - 3954054
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||  ||||||||| ||| ||||||||||||||||    
T  3954110 taccagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttag 3954054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 31540554 - 31540498
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| ||||||||||||| |||  ||||||||||||| ||||||||||||||||    
T  31540554 taccaggtaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttag 31540498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 31541623 - 31541679
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| |||||| ||| |||  ||||||||||||||||||||||||||||||    
T  31541623 taccagggacaaaaaccaaaattcgttatatttgcagggatcaaaaacatattttag 31541679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 774 - 825
Target Start/End: Complemental strand, 15599818 - 15599767
Alignment:
Q  774 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| |||||||||||| ||||| ||||| ||||||||||    
T  15599818 gggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttag 15599767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 773 - 830
Target Start/End: Original strand, 34911833 - 34911890
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||| ||||| |||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  34911833 agggatcaaaatccaaactcgctatatttgcagggaccaaaatcatattttagccttt 34911890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 3938061 - 3938117
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||| ||||| || |||||||||||||  |||| ||||||||||    
T  3938061 taccagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttag 3938117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 777 - 825
Target Start/End: Complemental strand, 27097362 - 27097314
Alignment:
Q  777 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||  |||||||| | |||||||||||||||||||||    
T  27097362 accaaaacccaaacttaccatatttacggggatcaaaaacatattttag 27097314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 825
Target Start/End: Complemental strand, 27570109 - 27570058
Alignment:
Q  774 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||| |||||||||||||||| ||||||||| ||| ||||| ||||||||||    
T  27570109 gggaacaaaacccaaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 772 - 830
Target Start/End: Original strand, 6912802 - 6912860
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||||||||    
T  6912802 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagtcttt 6912860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 787 - 825
Target Start/End: Complemental strand, 25252681 - 25252643
Alignment:
Q  787 aaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  25252681 aaactcgctatatttgcagagatcaaaaacatattttag 25252643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 769 - 835
Target Start/End: Original strand, 25254132 - 25254198
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||||| |||||| |||||||   ||||||||||||| ||||| ||||||||||| || |||||    
T  25254132 taccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagttttaatttt 25254198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 787 - 825
Target Start/End: Complemental strand, 25316466 - 25316428
Alignment:
Q  787 aaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  25316466 aaactcgctatatttgcagagatcaaaaacatattttag 25316428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 769 - 835
Target Start/End: Original strand, 25317922 - 25317988
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||||| |||||| |||||||   ||||||||||||| ||||| ||||||||||| || |||||    
T  25317922 taccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagttttaatttt 25317988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 772 - 834
Target Start/End: Original strand, 40764725 - 40764787
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 834  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| ||||||||    
T  40764725 cagggactaaaaccaaaacgaggcatatttgcagggagcaaaaccatattttagcctttattt 40764787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 837
Target Start/End: Complemental strand, 19565522 - 19565457
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| ||| |||||||    
T  19565522 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagccttgattttaa 19565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 776 - 825
Target Start/End: Complemental strand, 34910643 - 34910595
Alignment:
Q  776 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||| |||||| || |||||||||||||| |||||||||||||||    
T  34910643 gaccaaaactcaaacttgctatatttgcagggat-aaaaacatattttag 34910595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 4e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 769 - 830
Target Start/End: Original strand, 22534723 - 22534784
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  22534723 taccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagccttt 22534784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 769 - 836
Target Start/End: Original strand, 10718449 - 10718516
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 836  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| || |||||||    
T  10718449 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcctatatttta 10718516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 772 - 828
Target Start/End: Complemental strand, 3483688 - 3483632
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 828  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  3483688 cagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagtct 3483632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 10717179 - 10717123
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  10717179 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 10717123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 773 - 825
Target Start/End: Complemental strand, 14197879 - 14197827
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  14197879 agggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttag 14197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 17032100 - 17032022
Alignment:
Q  377 ttgtaacaatctttttgttattagtgctttataattttccttttaaattacatttcaattttctaactctttaaatttctc 457  Q
    |||||||  |||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  17032100 ttgtaactctcttttagttattagtg-tttataatttgccttttaaaatacatttcaattttctaact-tttaaatttctc 17032022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 17562536 - 17562458
Alignment:
Q  377 ttgtaacaatctttttgttattagtgctttataattttccttttaaattacatttcaattttctaactctttaaatttctc 457  Q
    |||||||  |||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  17562536 ttgtaactctcttttagttattagtg-tttataatttgccttttaaaatacatttcaattttctaact-tttaaatttctc 17562458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 28997998 - 28998050
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  28997998 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 28998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 769 - 830
Target Start/End: Complemental strand, 36588280 - 36588219
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  36588280 taccagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttagccttt 36588219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 28996892 - 28996836
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  28996892 taccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 28996836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 770 - 825
Target Start/End: Original strand, 45517962 - 45518017
Alignment:
Q  770 accagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||    
T  45517962 accagggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttag 45518017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 1420446 - 1420499
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| | |||||||||| ||||||||||||| ||||||||||||||||    
T  1420446 cagggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttag 1420499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 830
Target Start/End: Complemental strand, 22533375 - 22533314
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||||||||||||||||||||||| |||| | |||||| ||||| |||||||||| ||||    
T  22533375 taccagggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttagccttt 22533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 39440426 - 39440479
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  39440426 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttag 39440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 4182680 - 4182624
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||| |||||| |||||| ||||| ||||||||||    
T  4182680 taccagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttag 4182624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 22271001 - 22270945
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||||||    
T  22271001 taccagggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttag 22270945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 22272271 - 22272327
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||| ||||||||||    
T  22272271 taccagggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttag 22272327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 39439982 - 39439926
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||| ||||||| |||||| |||||||||||||||| ||||| ||||||||||    
T  39439982 taccagggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttag 39439926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 772 - 835
Target Start/End: Complemental strand, 10872970 - 10872907
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| |||||||||    
T  10872970 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttagcctttatttt 10872907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 3680746 - 3680799
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||| ||||  | |||||||||||||||||||| ||||||||||    
T  3680746 cagggaccaaaaccaaaacgaggcatatttgcagggatcaaaatcatattttag 3680799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 17030575 - 17030627
Alignment:
Q  386 tctttttgttattagtgctttataattttccttttaaattacatttcaattttc 439  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  17030575 tcttttagttattagtg-tttataattttccttttaaaatacatttcagttttc 17030627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 17561011 - 17561063
Alignment:
Q  386 tctttttgttattagtgctttataattttccttttaaattacatttcaattttc 439  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  17561011 tcttttagttattagtg-tttataattttccttttaaaatacatttcagttttc 17561063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 830
Target Start/End: Complemental strand, 45516455 - 45516394
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||| |||||||||||||| |||| |||||| || |||  ||||||||||||||||||||    
T  45516455 taccagagaccaaaacccaaattcgctatatttacatggactaaaaacatattttagtcttt 45516394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 3031544 - 3031600
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||| |||   ||||||||| |||||| ||||||||||||||||    
T  3031544 taccagggaccaaaacctaaatgagccatatttacagggaccaaaaacatattttag 3031600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 4183980 - 4184036
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||| | | |||||||||||||  |||| ||||||||||    
T  4183980 taccagggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttag 4184036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 773 - 837
Target Start/End: Original strand, 27117922 - 27117986
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    ||||||||||||| |||   | |||||||||||||| ||||| |||||||||| |||||||||||    
T  27117922 agggaccaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagcctttattttaa 27117986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 30124224 - 30124280
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| |||||| ||  |||||||||||| ||||| ||||||||||    
T  30124224 taccagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttag 30124280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 38456731 - 38456787
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||| ||| | || ||||||||||||| ||||| ||||||||||    
T  38456731 taccagggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttag 38456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 38658539 - 38658483
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| |||| ||||||||| ||| || || ||||||||||    
T  38658539 taccagggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttag 38658483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 831
Target Start/End: Complemental strand, 20984201 - 20984142
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| |||||||||| |||||    
T  20984201 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagccttta 20984142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 777 - 824
Target Start/End: Original strand, 41357375 - 41357422
Alignment:
Q  777 accaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    |||||||||||||||| ||||||||||  ||| |||||||||||||||    
T  41357375 accaaaacccaaactcaccatatttgcgaggaccaaaaacatatttta 41357422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 827
Target Start/End: Complemental strand, 38455501 - 38455447
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 827  Q
    |||||||||||| |||| || | ||||||||| ||| ||||||||||||||||||    
T  38455501 agggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttagtc 38455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 1376993 - 1376940
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||||||||||||| ||||| | || ||||||||||||| ||||| |||||||    
T  1376993 taccagggaccaaaatccaaattggctatatttgcagggaccaaaatcatattt 1376940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 822
Target Start/End: Original strand, 1385556 - 1385609
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    ||||||||||||||| ||||| | || ||||||||||||| ||||| |||||||    
T  1385556 taccagggaccaaaatccaaattggctatatttgcagggaccaaaaccatattt 1385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 4473989 - 4474042
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  4473989 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttag 4474042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 837
Target Start/End: Complemental strand, 28346449 - 28346384
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| ||| |||||||    
T  28346449 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagccttaattttaa 28346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 830
Target Start/End: Original strand, 36589388 - 36589449
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||| ||||||||||| |||||||| ||||||||||| |  |||| |||||||||| ||||    
T  36589388 taccaaggaccaaaacctaaactcgctatatttgcaggaactaaaatcatattttagccttt 36589449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 2e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 33137229 - 33137285
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33137229 taccagggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 33137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 3879144 - 3879088
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  3879144 taccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 3879088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 22204113 - 22204057
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22204113 taccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 22204057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 42359347 - 42359403
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  42359347 taccagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 42359403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 54121701 - 54121757
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  54121701 taccagggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttag 54121757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 3880501 - 3880553
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  3880501 agggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttag 3880553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 833
Target Start/End: Original strand, 29060883 - 29060947
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    ||||| |||||||||  ||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  29060883 taccaaggaccaaaattcaaactcgctatatttgcagggattaaaaacatattttagcctttatt 29060947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 32699319 - 32699371
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  32699319 agggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttag 32699371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 773 - 825
Target Start/End: Complemental strand, 33134945 - 33134893
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  33134945 agggaccaatatccaaactcgtcatatttgcagggatcaaaaacatattttag 33134893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 45618343 - 45618287
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||    
T  45618343 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattag 45618287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 824
Target Start/End: Original strand, 17371846 - 17371901
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||    
T  17371846 taccagggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 772 - 834
Target Start/End: Complemental strand, 34659761 - 34659699
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 834  Q
    ||||||||||||||  ||||||||||||||||||||| ||||| |||||||||| ||| ||||    
T  34659761 cagggaccaaaaccttaactcgccatatttgcagggaccaaaagcatattttagccttcattt 34659699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 776 - 829
Target Start/End: Original strand, 41935078 - 41935131
Alignment:
Q  776 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctt 829  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||    
T  41935078 gaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttaatctt 41935131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 830
Target Start/End: Original strand, 55542580 - 55542641
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    |||||||||||||| |||||||  || |||||||||||||||||||||| ||||||| ||||    
T  55542580 taccagggaccaaatcccaaacatgctatatttgcagggatcaaaaacagattttagccttt 55542641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 19674472 - 19674416
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| ||||||||| ||||||||| ||| ||||| ||||||||||    
T  19674472 taccagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttag 19674416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 777 - 825
Target Start/End: Complemental strand, 38166545 - 38166497
Alignment:
Q  777 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||||    
T  38166545 accaaaatccaaactcgctatatttgcagggattaaaaacatattttag 38166497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 837
Target Start/End: Complemental strand, 42358090 - 42358022
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    ||||||||| |||||| ||||||  | ||||||||||||| |||||||||||||||| |||| ||||||    
T  42358090 taccagggatcaaaactcaaacttcctatatttgcagggaccaaaaacatattttagccttttttttaa 42358022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 45619732 - 45619788
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||| ||||||| |||||||| |||||||||||||  |||||||||||||||    
T  45619732 taccagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttag 45619788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 769 - 808
Target Start/End: Complemental strand, 40198632 - 40198593
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcaggga 808  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  40198632 taccagggaccaaaacccaaactcgctatatttgcaggga 40198593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 831
Target Start/End: Complemental strand, 16573436 - 16573374
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 831  Q
    |||||| |||||||||||||| |||||||||||| || || ||||| |||||||||| |||||    
T  16573436 taccagagaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttagccttta 16573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 775 - 825
Target Start/End: Complemental strand, 41933870 - 41933820
Alignment:
Q  775 ggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||| |||||||||| || ||||| ||||||||||    
T  41933870 ggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttag 41933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 788 - 825
Target Start/End: Original strand, 5259171 - 5259208
Alignment:
Q  788 aactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  5259171 aactcgccatatttgcagggaccaaaaacatattttag 5259208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 19675624 - 19675677
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||| |||||||||  ||||||||||||| ||||| ||||||||||    
T  19675624 cagggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttag 19675677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 776 - 828
Target Start/End: Complemental strand, 16916118 - 16916066
Alignment:
Q  776 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 828  Q
    ||||||||| ||||||| ||||||||||||||| |||||  ||||||||||||    
T  16916118 gaccaaaactcaaactcaccatatttgcagggaccaaaagtatattttagtct 16916066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 835
Target Start/End: Complemental strand, 26412245 - 26412182
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 835  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| || ||||||    
T  26412245 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttagcctatatttt 26412182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 771 - 825
Target Start/End: Complemental strand, 4211617 - 4211563
Alignment:
Q  771 ccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  4211617 ccagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 4211563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 12152438 - 12152491
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  12152438 cagggaccaaaaccaaaacgagacatatttgcagggaccaaaaccatattttag 12152491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 14487857 - 14487804
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  14487857 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 14487804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 833
Target Start/End: Original strand, 14791751 - 14791812
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  14791751 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctttatt 14791812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 830
Target Start/End: Complemental strand, 17281629 - 17281568
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||||||||||| ||||| |||| |||||||||||||  |||| || ||||||| ||||    
T  17281629 taccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagccttt 17281568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 830
Target Start/End: Complemental strand, 17370131 - 17370070
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 830  Q
    ||||||||||||||| ||||| |||| |||||||||||||  |||| || ||||||| ||||    
T  17370131 taccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagccttt 17370070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 23245540 - 23245593
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  23245540 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttag 23245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 26412529 - 26412582
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| ||||||||||    
T  26412529 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 26412582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 833
Target Start/End: Original strand, 30046737 - 30046798
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  30046737 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 30046798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 833
Target Start/End: Original strand, 30061078 - 30061139
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  30061078 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 30061139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 780 - 825
Target Start/End: Complemental strand, 32698046 - 32698001
Alignment:
Q  780 aaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||| ||| |||| ||||||||||||||||||| ||||||||||    
T  32698046 aaaacctaaattcgctatatttgcagggatcaaaatcatattttag 32698001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 833
Target Start/End: Original strand, 43231334 - 43231395
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  43231334 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 43231395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 46292447 - 46292394
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  46292447 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 46292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 1e-16; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 344995 - 344942
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 822  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  344995 taccagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatattt 344942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 773 - 825
Target Start/End: Complemental strand, 374389 - 374337
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  374389 agggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttag 374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 345902 - 345954
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  345902 agggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttag 345954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 780 - 825
Target Start/End: Original strand, 376381 - 376426
Alignment:
Q  780 aaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttag 376426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 9980 - 9924
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  9980 taccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 9924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 11523 - 11579
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  11523 taccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 11579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 10373 - 10317
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||| |||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  10373 taccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 10317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 432 - 488
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  432 taccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 30908 - 30964
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  30908 taccagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttag 30964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 29787 - 29731
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||||| |||||||||   |||||||||||| ||||| ||||||||||    
T  29787 taccagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttag 29731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 120986 - 121042
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||    
T  120986 taccagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttag 121042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 119651 - 119595
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  119651 taccagggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 119595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 42759 - 42812
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  42759 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttag 42812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 1140 - 1192
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||||||||||| |||||||||||||||||||| || |||||| |||||||||    
T  1140 agggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttag 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Complemental strand, 202637 - 202581
Alignment:
Q  769 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 825  Q
    |||| |||||||||| |||||||||  ||||||||||||| ||||| ||||||||||    
T  202637 tacccgggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttag 202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 824
Target Start/End: Complemental strand, 1914 - 1863
Alignment:
Q  773 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 824  Q
    ||||| |||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  1914 agggatcaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 1863  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 795 - 837
Target Start/End: Complemental strand, 21728 - 21686
Alignment:
Q  795 catatttgcagggatcaaaaacatattttagtctttattttaa 837  Q
    |||||||||||||||||||| |||||||||| |||| ||||||    
T  21728 catatttgcagggatcaaaaccatattttagccttttttttaa 21686  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 833
Target Start/End: Complemental strand, 47980 - 47919
Alignment:
Q  772 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 833  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  47980 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctttatt 47919  T

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