View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15089_high_4 (Length: 323)

Name: NF15089_high_4
Description: NF15089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15089_high_4
NF15089_high_4
[»] chr5 (47 HSPs)
chr5 (14-192)||(2865124-2865301)
chr5 (14-192)||(18183338-18183515)
chr5 (14-191)||(19359136-19359312)
chr5 (14-191)||(5819298-5819474)
chr5 (14-191)||(8647438-8647614)
chr5 (14-195)||(29455111-29455291)
chr5 (18-192)||(14215616-14215789)
chr5 (14-192)||(24362205-24362382)
chr5 (14-192)||(8460929-8461106)
chr5 (14-192)||(15708970-15709146)
chr5 (14-192)||(164560-164737)
chr5 (14-188)||(15372242-15372415)
chr5 (14-189)||(24331929-24332107)
chr5 (25-192)||(14463901-14464066)
chr5 (30-192)||(19359520-19359682)
chr5 (14-193)||(16018587-16018763)
chr5 (30-188)||(5818932-5819090)
chr5 (30-192)||(8647822-8647984)
chr5 (30-188)||(18182973-18183131)
chr5 (30-192)||(24331558-24331722)
chr5 (30-196)||(8461315-8461481)
chr5 (30-189)||(14215243-14215402)
chr5 (30-185)||(24361843-24361997)
chr5 (14-169)||(25000112-25000266)
chr5 (30-189)||(2864756-2864915)
chr5 (30-185)||(24325218-24325372)
chr5 (31-191)||(164191-164350)
chr5 (30-196)||(29454735-29454901)
chr5 (28-193)||(25000471-25000636)
chr5 (50-191)||(7349422-7349562)
chr5 (28-188)||(16018969-16019129)
chr5 (30-191)||(15709353-15709513)
chr5 (64-191)||(7348559-7348685)
chr5 (70-190)||(4222147-4222266)
chr5 (77-189)||(15371873-15371983)
chr5 (49-191)||(4623148-4623287)
chr5 (52-185)||(6019177-6019309)
chr5 (52-191)||(4219663-4219800)
chr5 (51-190)||(6018315-6018452)
chr5 (51-179)||(4624631-4624758)
chr5 (50-109)||(13814133-13814190)
chr5 (28-193)||(41834443-41834607)
chr5 (30-109)||(14462686-14462769)
chr5 (14-73)||(24325580-24325639)
chr5 (30-60)||(14340793-14340823)
chr5 (14-60)||(16752711-16752757)
chr5 (30-91)||(10721884-10721945)
[»] chr1 (40 HSPs)
chr1 (14-193)||(50970647-50970825)
chr1 (14-188)||(15173099-15173272)
chr1 (21-195)||(15646571-15646744)
chr1 (14-192)||(18984118-18984295)
chr1 (21-193)||(5540194-5540365)
chr1 (14-194)||(29869617-29869796)
chr1 (14-195)||(5962947-5963127)
chr1 (21-196)||(29306948-29307122)
chr1 (14-189)||(33144288-33144462)
chr1 (14-191)||(21856412-21856588)
chr1 (14-191)||(8678911-8679086)
chr1 (14-192)||(9018972-9019149)
chr1 (14-191)||(17433216-17433392)
chr1 (16-192)||(26859431-26859605)
chr1 (21-191)||(29307317-29307487)
chr1 (14-189)||(39154021-39154195)
chr1 (28-189)||(17433597-17433758)
chr1 (32-192)||(50970277-50970437)
chr1 (64-196)||(18984538-18984669)
chr1 (30-193)||(33143913-33144078)
chr1 (30-191)||(29870003-29870164)
chr1 (30-190)||(5539817-5539977)
chr1 (73-190)||(8678542-8678658)
chr1 (31-190)||(4636356-4636515)
chr1 (30-189)||(21856044-21856203)
chr1 (30-193)||(39154404-39154567)
chr1 (30-192)||(15173478-15173639)
chr1 (50-195)||(52268286-52268430)
chr1 (21-192)||(9019338-9019509)
chr1 (30-192)||(15646191-15646353)
chr1 (73-191)||(26859059-26859176)
chr1 (16-131)||(4636033-4636146)
chr1 (30-190)||(5962579-5962739)
chr1 (105-201)||(2733416-2733512)
chr1 (74-189)||(52269177-52269291)
chr1 (30-191)||(17112282-17112442)
chr1 (116-189)||(47826966-47827039)
chr1 (94-166)||(47827036-47827108)
chr1 (20-54)||(17088516-17088550)
chr1 (14-98)||(17088242-17088326)
[»] chr2 (39 HSPs)
chr2 (16-188)||(11090524-11090695)
chr2 (14-196)||(40027135-40027316)
chr2 (14-192)||(239352-239528)
chr2 (14-192)||(1978107-1978284)
chr2 (14-199)||(40815714-40815898)
chr2 (14-191)||(43058333-43058509)
chr2 (14-192)||(18451200-18451377)
chr2 (14-192)||(22374319-22374496)
chr2 (14-195)||(26538093-26538273)
chr2 (14-185)||(3025472-3025641)
chr2 (17-188)||(14432145-14432315)
chr2 (16-191)||(28616613-28616788)
chr2 (21-192)||(26538454-26538625)
chr2 (21-188)||(8425736-8425902)
chr2 (30-192)||(7446730-7446892)
chr2 (50-193)||(20444747-20444889)
chr2 (30-193)||(18450828-18450991)
chr2 (16-193)||(7446340-7446519)
chr2 (30-189)||(40815347-40815506)
chr2 (30-192)||(22374709-22374871)
chr2 (50-190)||(35781068-35781207)
chr2 (30-193)||(40027524-40027687)
chr2 (30-192)||(43058717-43058878)
chr2 (73-192)||(28847123-28847241)
chr2 (50-192)||(20440437-20440577)
chr2 (50-191)||(35779708-35779848)
chr2 (30-193)||(28616998-28617161)
chr2 (30-192)||(11090904-11091066)
chr2 (30-190)||(239736-239896)
chr2 (64-192)||(1978528-1978655)
chr2 (31-188)||(8425358-8425514)
chr2 (31-191)||(3025848-3026006)
chr2 (30-189)||(14432525-14432684)
chr2 (50-189)||(8972239-8972377)
chr2 (50-189)||(15551501-15551639)
chr2 (192-266)||(16195049-16195125)
chr2 (49-189)||(15552458-15552596)
chr2 (14-192)||(28143400-28143576)
chr2 (127-193)||(42192724-42192791)
[»] chr7 (30 HSPs)
chr7 (14-193)||(37786765-37786943)
chr7 (14-188)||(19830423-19830596)
chr7 (14-191)||(19590525-19590701)
chr7 (16-191)||(32004985-32005159)
chr7 (14-193)||(38858641-38858819)
chr7 (16-192)||(2659211-2659386)
chr7 (16-192)||(35289272-35289447)
chr7 (14-193)||(29100220-29100398)
chr7 (16-192)||(34534162-34534337)
chr7 (14-203)||(4641428-4641616)
chr7 (21-185)||(23953105-23953268)
chr7 (30-192)||(19590909-19591071)
chr7 (21-188)||(4478076-4478242)
chr7 (30-192)||(2658838-2659000)
chr7 (30-192)||(38859025-38859187)
chr7 (30-179)||(29099862-29100011)
chr7 (31-192)||(32004613-32004774)
chr7 (50-192)||(38160950-38161091)
chr7 (32-192)||(37787153-37787313)
chr7 (30-192)||(34533790-34533952)
chr7 (74-191)||(35288903-35289019)
chr7 (30-193)||(19830804-19830966)
chr7 (52-192)||(28583438-28583577)
chr7 (30-188)||(4641828-4641983)
chr7 (73-192)||(23952729-23952848)
chr7 (50-190)||(28584327-28584466)
chr7 (265-306)||(4887783-4887824)
chr7 (21-56)||(32427397-32427432)
chr7 (14-60)||(35579028-35579074)
chr7 (14-56)||(35579256-35579298)
[»] chr6 (36 HSPs)
chr6 (14-193)||(15828010-15828188)
chr6 (14-192)||(20741099-20741276)
chr6 (14-191)||(10900299-10900475)
chr6 (14-191)||(11276951-11277127)
chr6 (14-192)||(18257136-18257313)
chr6 (30-192)||(2319671-2319832)
chr6 (14-203)||(11444975-11445163)
chr6 (16-191)||(1149802-1149977)
chr6 (16-192)||(12935528-12935703)
chr6 (14-190)||(31470685-31470860)
chr6 (14-192)||(28472636-28472812)
chr6 (14-192)||(29859825-29860001)
chr6 (14-188)||(2322588-2322760)
chr6 (14-190)||(18505288-18505463)
chr6 (21-188)||(10899942-10900109)
chr6 (30-192)||(12935156-12935318)
chr6 (14-193)||(23073997-23074164)
chr6 (30-192)||(11445371-11445533)
chr6 (30-192)||(22219737-22219899)
chr6 (30-192)||(23075512-23075674)
chr6 (27-191)||(4811372-4811535)
chr6 (30-193)||(20741485-20741651)
chr6 (30-188)||(18504922-18505080)
chr6 (21-193)||(11276588-11276760)
chr6 (30-191)||(18257521-18257682)
chr6 (30-195)||(31470311-31470476)
chr6 (50-189)||(29033436-29033575)
chr6 (54-194)||(3835135-3835274)
chr6 (103-192)||(1149464-1149553)
chr6 (64-190)||(15827639-15827766)
chr6 (50-189)||(29035042-29035180)
chr6 (50-192)||(18296144-18296284)
chr6 (64-191)||(4811675-4811801)
chr6 (15-97)||(35163557-35163639)
chr6 (146-191)||(22534225-22534270)
chr6 (14-54)||(32836367-32836407)
[»] scaffold0295 (2 HSPs)
scaffold0295 (14-192)||(4792-4969)
scaffold0295 (76-189)||(5222-5334)
[»] chr4 (61 HSPs)
chr4 (14-195)||(33109680-33109860)
chr4 (14-189)||(46193774-46193948)
chr4 (14-189)||(23494445-23494619)
chr4 (14-192)||(25937669-25937846)
chr4 (14-189)||(4219559-4219733)
chr4 (14-191)||(11153516-11153692)
chr4 (14-194)||(15523603-15523782)
chr4 (20-192)||(25447611-25447782)
chr4 (21-189)||(38962195-38962362)
chr4 (14-192)||(12234328-12234505)
chr4 (14-188)||(22434547-22434718)
chr4 (14-192)||(51020796-51020973)
chr4 (14-193)||(22170306-22170483)
chr4 (14-192)||(48526195-48526371)
chr4 (14-193)||(2118665-2118842)
chr4 (14-188)||(54995437-54995609)
chr4 (30-188)||(54995072-54995230)
chr4 (14-188)||(45082435-45082606)
chr4 (28-191)||(46193405-46193568)
chr4 (31-192)||(15523234-15523395)
chr4 (30-191)||(22434179-22434340)
chr4 (30-191)||(25447247-25447408)
chr4 (30-201)||(45082808-45082979)
chr4 (74-192)||(23494872-23494989)
chr4 (30-192)||(20470895-20471057)
chr4 (14-123)||(12503805-12503913)
chr4 (30-191)||(12234713-12234874)
chr4 (30-193)||(11153144-11153307)
chr4 (50-190)||(44892553-44892692)
chr4 (30-193)||(48526565-48526728)
chr4 (30-188)||(4219943-4220101)
chr4 (64-193)||(25938090-25938218)
chr4 (64-192)||(33109883-33110010)
chr4 (30-192)||(51021180-51021341)
chr4 (30-193)||(18751597-18751760)
chr4 (64-189)||(2118295-2118419)
chr4 (50-190)||(20958266-20958403)
chr4 (76-189)||(18763951-18764063)
chr4 (52-184)||(20957196-20957327)
chr4 (54-193)||(16690934-16691072)
chr4 (73-191)||(35363028-35363146)
chr4 (50-173)||(43243686-43243807)
chr4 (50-192)||(48293593-48293734)
chr4 (50-190)||(44890518-44890657)
chr4 (52-173)||(43281198-43281317)
chr4 (50-191)||(48294947-48295088)
chr4 (50-188)||(48713751-48713888)
chr4 (30-174)||(12503453-12503597)
chr4 (54-192)||(48708294-48708431)
chr4 (64-194)||(10258306-10258435)
chr4 (50-138)||(43242323-43242410)
chr4 (14-81)||(18751971-18752038)
chr4 (14-195)||(17503970-17504149)
chr4 (121-193)||(16318251-16318323)
chr4 (54-191)||(16691481-16691616)
chr4 (94-191)||(55189528-55189625)
chr4 (14-54)||(17504329-17504369)
chr4 (14-54)||(35193443-35193483)
chr4 (50-130)||(44220782-44220861)
chr4 (14-193)||(40160092-40160269)
chr4 (127-196)||(55677439-55677509)
[»] chr3 (58 HSPs)
chr3 (14-191)||(39555946-39556122)
chr3 (14-192)||(31779021-31779198)
chr3 (16-192)||(20840559-20840734)
chr3 (14-188)||(5136983-5137156)
chr3 (14-188)||(41046703-41046876)
chr3 (14-193)||(37726927-37727105)
chr3 (14-192)||(24300925-24301102)
chr3 (14-193)||(23644460-23644638)
chr3 (16-191)||(32535330-32535508)
chr3 (14-194)||(17464860-17465040)
chr3 (35-192)||(48452988-48453144)
chr3 (14-194)||(27393946-27394125)
chr3 (14-189)||(25853596-25853770)
chr3 (14-188)||(26274936-26275108)
chr3 (14-192)||(26837725-26837901)
chr3 (14-192)||(30104481-30104657)
chr3 (21-191)||(43973441-43973610)
chr3 (14-187)||(22425182-22425354)
chr3 (30-192)||(43973824-43973986)
chr3 (30-195)||(27393657-27393822)
chr3 (30-191)||(37727314-37727475)
chr3 (30-193)||(20840945-20841108)
chr3 (30-193)||(39555576-39555739)
chr3 (30-192)||(17464490-17464652)
chr3 (30-193)||(31778651-31778814)
chr3 (30-192)||(4275748-4275910)
chr3 (50-188)||(25612382-25612519)
chr3 (30-191)||(25853234-25853395)
chr3 (28-192)||(29801798-29801962)
chr3 (30-192)||(5137365-5137527)
chr3 (30-191)||(23644849-23645010)
chr3 (30-194)||(30098147-30098311)
chr3 (30-188)||(26837363-26837521)
chr3 (64-193)||(32534957-32535085)
chr3 (49-190)||(32697105-32697244)
chr3 (30-193)||(26274565-26274728)
chr3 (30-192)||(22424813-22424975)
chr3 (69-191)||(29801356-29801477)
chr3 (50-191)||(50116814-50116954)
chr3 (51-191)||(23228414-23228552)
chr3 (30-193)||(24300555-24300717)
chr3 (52-192)||(45965937-45966076)
chr3 (50-192)||(51474738-51474880)
chr3 (30-166)||(41047083-41047218)
chr3 (50-178)||(25419157-25419284)
chr3 (50-192)||(37220556-37220697)
chr3 (76-190)||(51473429-51473542)
chr3 (52-189)||(25420548-25420684)
chr3 (105-192)||(37222030-37222117)
chr3 (62-172)||(18010162-18010271)
chr3 (13-60)||(49407925-49407972)
chr3 (14-85)||(55192222-55192293)
chr3 (14-74)||(29801532-29801592)
chr3 (14-98)||(37075780-37075864)
chr3 (50-97)||(23227349-23227396)
chr3 (14-60)||(27200062-27200108)
chr3 (146-188)||(32695706-32695748)
chr3 (127-192)||(52375812-52375878)
[»] chr8 (33 HSPs)
chr8 (14-192)||(12571862-12572040)
chr8 (14-192)||(19176659-19176836)
chr8 (14-193)||(9930026-9930204)
chr8 (17-192)||(41681133-41681306)
chr8 (14-192)||(31133219-31133396)
chr8 (14-193)||(33328156-33328334)
chr8 (14-192)||(44831614-44831791)
chr8 (16-192)||(11656454-11656630)
chr8 (14-187)||(13224645-13224816)
chr8 (14-191)||(9178005-9178180)
chr8 (30-192)||(19176289-19176451)
chr8 (30-193)||(13225023-13225186)
chr8 (30-201)||(44831237-44831408)
chr8 (73-191)||(41681562-41681679)
chr8 (14-188)||(4630161-4630328)
chr8 (30-193)||(11656841-11657004)
chr8 (30-201)||(12572235-12572406)
chr8 (30-188)||(9928912-9929070)
chr8 (16-133)||(33743290-33743406)
chr8 (31-190)||(31133605-31133764)
chr8 (30-189)||(33328524-33328683)
chr8 (64-192)||(34540967-34541094)
chr8 (30-192)||(33742921-33743082)
chr8 (82-192)||(11336959-11337068)
chr8 (36-192)||(4629796-4629952)
chr8 (52-188)||(10918129-10918264)
chr8 (50-193)||(8073957-8074098)
chr8 (50-112)||(43958264-43958325)
chr8 (151-208)||(10919691-10919748)
chr8 (30-97)||(9177725-9177793)
chr8 (158-192)||(9177666-9177700)
chr8 (146-195)||(599528-599577)
chr8 (15-48)||(18805304-18805337)
[»] scaffold0019 (1 HSPs)
scaffold0019 (14-192)||(134042-134219)
[»] scaffold0951 (2 HSPs)
scaffold0951 (16-201)||(1657-1841)
scaffold0951 (30-192)||(2051-2213)
[»] scaffold0273 (2 HSPs)
scaffold0273 (14-192)||(4576-4753)
scaffold0273 (30-152)||(4242-4364)
[»] scaffold0007 (3 HSPs)
scaffold0007 (14-195)||(64298-64478)
scaffold0007 (75-193)||(64735-64852)
scaffold0007 (14-195)||(205738-205917)
[»] scaffold1223 (2 HSPs)
scaffold1223 (14-189)||(755-928)
scaffold1223 (21-191)||(1116-1286)
[»] scaffold0432 (2 HSPs)
scaffold0432 (14-188)||(10242-10414)
scaffold0432 (94-188)||(9935-10029)
[»] scaffold0027 (2 HSPs)
scaffold0027 (14-192)||(42528-42704)
scaffold0027 (21-194)||(42166-42339)
[»] scaffold0417 (2 HSPs)
scaffold0417 (14-172)||(10640-10797)
scaffold0417 (64-191)||(11042-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (23-193)||(18833-19001)
scaffold0176 (92-191)||(19067-19166)
[»] scaffold0157 (2 HSPs)
scaffold0157 (14-123)||(16564-16672)
scaffold0157 (30-174)||(16880-17024)
[»] scaffold0113 (1 HSPs)
scaffold0113 (64-193)||(28662-28790)
[»] scaffold1585 (1 HSPs)
scaffold1585 (50-190)||(568-707)
[»] scaffold0057 (2 HSPs)
scaffold0057 (50-188)||(61863-62000)
scaffold0057 (117-192)||(61027-61102)
[»] scaffold0076 (1 HSPs)
scaffold0076 (94-188)||(8457-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (50-142)||(7693-7784)
[»] scaffold1696 (1 HSPs)
scaffold1696 (50-187)||(454-588)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 7e-80; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 2865124 - 2865301
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaa-atgataattgaaggac 2865222  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2865223 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 2865301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 18183338 - 18183515
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaa-atgataattgaaggac 18183436  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18183437 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18183515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 19359312 - 19359136
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 19359214  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  19359213 cgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 5819298 - 5819474
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaatgac 5819396  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5819397 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 8647614 - 8647438
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 8647516  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    | ||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8647515 cattttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 29455111 - 29455291
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggac 29455209  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    | ||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  29455210 cattttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagccttaa 29455291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 14215616 - 14215789
Alignment:
Q  18 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaac-aaaaatgatacttgaaggaccgtt 14215714  T
Q  118 ttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||| ||||||||||| ||||  ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  14215715 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcct 14215789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 24362205 - 24362382
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgatacttgaaggac 24362303  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||| |||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  24362304 cgttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 24362382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 8461106 - 8460929
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaaca-aaaatgataattgaatgac 8461008  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||| |||||||| || ||||||||||    
T  8461007 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagcct 8460929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 15709146 - 15708970
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaa-tgataattgaaggac 15709049  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| |  || |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  15709048 cgttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcct 15708970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 164560 - 164737
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaac-aaaaatgataattgaaggac 164658  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| | ||| ||||| |||||| |||||||||| ||||| ||||| | |||||||||||    
T  164659 cgttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcct 164737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 15372242 - 15372415
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||  |||| || |||||||||||||||| ||||| |||||||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaa-tgatacttgaaggac 15372340  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  15372341 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 24331929 - 24332107
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacg-aaaaatgcaacaaaaaatgataattgaagga 112  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  113 ccgttttgttct-tttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaa-tgtaattaag 189  Q
    |||||||||||| |||| |||| || ||||  ||||||||||||| ||||||||| || ||||||||| ||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 25 - 192
Target Start/End: Original strand, 14463901 - 14464066
Alignment:
Q  25 taggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttct 124  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaa-tgataattgaaggatcgttttgttct 14463998  T
Q  125 tttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
     ||||||||||  |  | ||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  14463999 attttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagcct 14464066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 19359520 - 19359682
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaa-atgataattgaaggaccgttttgttctgttt 19359618  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19359619 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19359682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 16018763 - 16018587
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||||| ||||||||| |||||   |||||||||||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat--ataattgaaggac 16018667  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||| ||||||||||| | ||  | |||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  16018666 cgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctt 16018587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 5819090 - 5818932
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaa-tgataattgaaagaccgttttgttctgttt 5818992  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  5818991 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 8647822 - 8647984
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| |  |||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 8647920  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8647921 taaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 18183131 - 18182973
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| ||| | |||||| | || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 18183033  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||| | ||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  18183032 taaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 24331722 - 24331558
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaat-gataattgaaggaccgttttgttctttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | ||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  128 ttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||| ||||| ||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcct 24331558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 8461315 - 8461481
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaa-atgataattgaaggaccgttttgttctgttt 8461413  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaa 196  Q
    |||||| | ||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8461414 taaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttaaa 8461481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataactgaaggacctttttgttctgttt 14215304  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||||||||  || ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  14215303 taaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgatacttgaaggaccattttgttctgtttt 24361899  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 185  Q
    | ||||| | ||  ||||||||| ||||||||||||| | ||||||||| ||||||    
T  24361898 acaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||| ||||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaa-taaaaatgataattaaaggac 25000168  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacga 169  Q
    | |||| |||| |||||| |||| | ||| |  |||||||||||||||||||||||    
T  25000167 cattttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttatgttt 2864817  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||||| | ||  | |||||||||||||||||||||| |||||||||| ||||||||||    
T  2864816 taaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||||| ||||||||| ||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgac-aaaaatgatacttgaaggaccattttgttctgtttt 24325274  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 185  Q
    | ||||| | ||  ||||||||| ||||||||||||| | ||||||||| ||||||    
T  24325273 acaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 164350 - 164191
Alignment:
Q  31 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    ||||| |||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||  ||||||||||| |||||||||||| | || |    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa--tgataattgaatgaccgttttgttttgttat 164253  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  164252 aaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 196
Target Start/End: Complemental strand, 29454901 - 29454735
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || |||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaa-tgataattcaaggaccgttttgttctgttt 29454803  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaa 196  Q
    |||||||| | ||| | |||||||||||||||||||||| | |||||||| || ||||||||||||||    
T  29454802 taaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagccttaaa 29454735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 25000471 - 25000636
Alignment:
Q  28 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttt 126  Q
    ||||||||||||||||||||| |||||||||||  | ||||| || ||| ||||||||||||||||||||| ||||||||||| |||| ||||||||| |    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaa-tgataattgaatgaccattttgttctgt 25000569  T
Q  127 tttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||   | ||| | ||||||||||||||||||||| || |||||||| ||||||||||||||    
T  25000570 tttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcctt 25000636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 7349422 - 7349562
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| | |||||||||||||||| ||||| |||||||||| ||||||| |||||||  |||||||| | ||||||||| | ||||| | ||||    
T  7349422 cgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaa-atgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttc 7349520  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  7349521 gtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 188
Target Start/End: Original strand, 16018969 - 16019129
Alignment:
Q  28 gtctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttt 126  Q
    ||||||||||||||||||||| ||||| |||||  ||||| | || ||||||||||||||| |||||||| ||||||||||||| ||| |||| |||| |    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaa-atgataattgaagaaccattttattctat 16019067  T
Q  127 tttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||| | ||||| | ||||||||||| ||||||||| ||||||||||| |||||||||    
T  16019068 tttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 15709353 - 15709513
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| || || |||||  | ||||| || ||||||||||||||||||||| ||| |||||| | ||||||||||||||||| |||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaa-tgataactaaaggaccgttttgttctgttt 15709451  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||| ||| | |||||||||| ||||||||||||||||| | |||||||| ||||||||||||    
T  15709452 taaa-gggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 7348685 - 7348559
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    |||||||||||||||||||||| ||||||||||| ||||||  ||||||  |||||||||| ||||||||||| | ||| | |||||||||||| | |||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaa-tgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaa 7348587  T
Q  164 acacgaggaccaaaaatgtaattaagcc 191  Q
    ||| ||||||||||||||||||||||||    
T  7348586 acatgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 190
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  70 gggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacga 169  Q
    |||||||||||||||||||||| |||| ||||||| |||| |||  ||||||||| ||||||||||| | ||| | ||||||||| || |||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaa-atgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacga 4222245  T
Q  170 ggaccaaaaatgtaattaagc 190  Q
    ||||||||| |||||||||||    
T  4222246 ggaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 77 - 189
Target Start/End: Complemental strand, 15371983 - 15371873
Alignment:
Q  77 ggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaa 176  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||| |  ||||||||||| |||||| ||||||| |||    
T  15371983 ggacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaa 15371886  T
Q  177 aaatgtaattaag 189  Q
    || ||||||||||    
T  15371885 aagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 4623287 - 4623148
Alignment:
Q  49 acgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagttt 148  Q
    |||||||||||| |||||||||||  ||||||| ||||||| | ||||| |||||||||||||||  ||||||||| |||||||  || ||||| | |||    
T  4623287 acgtttttggaggataaaatgggg--taggacggaaaatgccataaaaa-tgataattgaaggacaattttgttctgttttaaagaggcaggaccaattt 4623191  T
Q  149 cgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||| | |||||||||| |||||||| ||||||||||||    
T  4623190 cgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaa-tgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcg 150  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||| ||||||||| || ||| |||||||||| ||||||||| | | ||  |||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaa-atgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcg 6019275  T
Q  151 tgagtaggccaaaacacgaggaccaaaaatgtaat 185  Q
    |||||| ||||||||| || |||||||||||||||    
T  6019276 tgagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 4219800 - 4219663
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgt 151  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| |||||| | ||||||   |||||||| |||||||| || | ||| | ||| ||    
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaa-tgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgt 4219703  T
Q  152 gagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
     | ||| |||||||||||||| ||||| ||||||||||||    
T  4219702 aaatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 6018452 - 6018315
Alignment:
Q  51 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcg 150  Q
    ||||||||||   ||||| | ||||||||| |||| ||||||||||| |||||||||||| |   ||||||||| ||||||||||  | ||| |||||||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaa-tgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcg 6018355  T
Q  151 tgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    |||||||  ||||||||||| |||||||||||||||||||    
T  6018354 tgagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 4624631 - 4624758
Alignment:
Q  51 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcg 150  Q
    ||||||| || ||||||||||||||||||||||||||||||| | |||||||||||||| ||  |||||||| | |||||||  |  | ||| | |||||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaac-ataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcg 4624729  T
Q  151 tgagtaggccaaaacacgaggaccaaaaa 179  Q
    ||||||||  ||||||||||||| |||||    
T  4624730 tgagtaggttaaaacacgaggacgaaaaa 4624758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 13814133 - 13814190
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaa 109  Q
    ||||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  13814133 cgtttttggaggataaaatgggg-gtaggacgaaaagtgcaac-aaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 41834443 - 41834607
Alignment:
Q  28 gtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttt 127  Q
    ||||||||||||||||||||| |||||   |||   ||||| || |||||||| |||| ||||| |||| |||||| || | |||| |||||||||  |     
T  41834443 gtctaaaactgtcatttctctgcgtttcaagagttgaaaataggaggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgatc 41834541  T
Q  128 ttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    | |||  || ||||| | |||||||||  || |||||  |||||||||||| ||||||||||||||    
T  41834542 tgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcctt 41834607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 14462769 - 14462686
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttg----gagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaa 109  Q
    ||||||||||||||||||||||||| ||    |||  | ||||| || ||||||||||||||||||||| |||||||||||||||    
T  14462769 ctaaaactgtcatttctctacgtttctgtctggagtttgaaaataggaggtaggacgaaaaatgcaaca-aaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggg 73  Q
    |||||||||| || |||||||||||||||||||||    || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 14340793 - 14340823
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggag 60  Q
    |||||||||||||||||||||||||||||||    
T  14340793 ctaaaactgtcatttctctacgtttttggag 14340823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggag 60  Q
    |||||||||||||||||||||||| |||||||| | ||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 10721945 - 10721884
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaa 91  Q
    ||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| |||||    
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaa 10721884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 50970647 - 50970825
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaaggac 50970745  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  50970746 cgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 50970825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaagaac 15173174  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15173173 cgttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 21 - 195
Target Start/End: Original strand, 15646571 - 15646744
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttg 15646669  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15646670 ttctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttaa 15646744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 18984295 - 18984118
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 18984197  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18984196 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 18984118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 5540194 - 5540365
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttc 5540292  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5540293 ttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 5540365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 29869796 - 29869617
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaaca-aaaataataattgaaggac 29869698  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctta 194  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  29869697 cgttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcctta 29869617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 5962947 - 5963127
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaaagac 5963045  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
     |||||||||| ||||||||||| | ||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  5963046 tgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccttaa 5963127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 21 - 196
Target Start/End: Complemental strand, 29307122 - 29306948
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggaccgttttg 29307024  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaa 196  Q
    |||| ||||||||||  | ||| ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  29307023 ttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccataaa 29306948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgatatttgaaggtc 33144386  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    | ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  33144387 cattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 21856412 - 21856588
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagc-aaaaatgatacttgaaggac 21856510  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| |||||||| || ||||  |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  21856511 cgttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 8678911 - 8679086
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||| |||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaa-atgataattgaatgac 8679008  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    | ||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  8679009 ctttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 9019149 - 9018972
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||| ||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgatagttgaatgac 9019051  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| || || |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  9019050 cgttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcct 9018972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 17433392 - 17433216
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca-aaaatgatacttgaaggac 17433294  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| ||||||||||| | |   |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  17433293 cgttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 26859431 - 26859605
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    |||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccg 26859528  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    | ||||||| ||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  26859529 tattgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagcct 26859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 29307317 - 29307487
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    |||||||||||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgtttt 29307415  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| || |||||||||    
T  29307416 gttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 39154195 - 39154021
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||| | |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaaca-aaaatgataattgcaggac 39154097  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||||||||| ||||||||||| | ||  ||||||||||||| ||||||||| || |||||||| ||||||||||    
T  39154096 cgttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  28 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttt 126  Q
    ||||||||||||||||||||| ||||| || ||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgt 17433695  T
Q  127 tttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||||||| | ||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  17433696 tttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 50970437 - 50970277
Alignment:
Q  32 aaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttta 130  Q
    ||||||||||||||||| ||||| |||||  | ||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgattta 50970339  T
Q  131 aaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||| | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50970338 aaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 18984538 - 18984669
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||    
T  18984538 aaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaa 18984636  T
Q  164 acacgaggaccaaaaatgtaattaagccttaaa 196  Q
    |||| |||||||||| |||||||||||||||||    
T  18984637 acacaaggaccaaaagtgtaattaagccttaaa 18984669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 33144078 - 33143913
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || |||||||||||| |||||| |||||||||||||||||||||||||||||||| |||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaa-aaaaaatgataattgaaggaccgttttgttctgttt 33143980  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatg--taattaagcctt 193  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  33143979 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtataattaagcctt 33143913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 29870003 - 29870164
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |  ||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 29870101  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||| || ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  29870102 taaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 5539977 - 5539817
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||| | ||||| |||||  | ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaa-tgataattgaaggaccgttttgttctgttt 5539879  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  5539878 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 8678658 - 8678542
Alignment:
Q  73 ggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgagga 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  8678658 ggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 8678560  T
Q  173 ccaaaaatgtaattaagc 190  Q
    |||||| |||||||||||    
T  8678559 ccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 4636356 - 4636515
Alignment:
Q  31 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    ||||| |||||||||||| ||||| |||||  | ||||| || ||| |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaa-atgataattgaaggatcgttttgttctgtttt 4636454  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  4636455 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 21856203 - 21856044
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 21856105  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||||| ||||| ||||||||||||||  ||||||||||||||||||| ||||||||||    
T  21856104 taaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 39154404 - 39154567
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||| |||||||||||| ||||| || ||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||| | |||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccattttgttatgttt 39154502  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39154503 taaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 39154567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 15173478 - 15173639
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctgttt 15173576  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||  ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15173577 taaaaggc-aggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15173639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 50 - 195
Target Start/End: Complemental strand, 52268430 - 52268286
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||| |||||| |||| ||| |||||||||| ||||||||||| ||||| | ||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaa-tgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttc 52268332  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  52268331 gtgagcaggccaaaatacgaggaccaaaagtgtaattaagccttaa 52268286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 192
Target Start/End: Original strand, 9019338 - 9019509
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    |||| |||||||||||||| |||||||| ||||| ||| |  | ||||| || |||||||||||||||||||||||| |||||||||||| |||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaatgaccgtttt 9019436  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||| |||||||| || || || ||||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  9019437 gttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 9019509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 15646353 - 15646191
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| | ||| |||||  | |||||  | ||||||||||||||||||||||||| |||||||||||| ||| ||||||||| |||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaa-tgataattgaagtaccattttgttctgttt 15646255  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  15646254 taaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 15646191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 26859176 - 26859059
Alignment:
Q  73 ggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgagga 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| |||||||| ||||||||||||||| ||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaagga 26859078  T
Q  173 ccaaaaatgtaattaagcc 191  Q
    |||||| ||||||||||||    
T  26859077 ccaaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||||||||| ||||||||| |||||||||||    
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaaca-aaaatgatacttgaaggaccg 4636048  T
Q  116 ttttgttcttttttaa 131  Q
     |||||||| ||||||    
T  4636047 -tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 5962739 - 5962579
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||||||| ||||  |||| |||||  | ||||| || ||||| ||||||||||||||||||| ||||| ||||| |||||||||||||| |||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaa-tgatagttgaaagaccgttttgttctgttt 5962641  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||  |||| |||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  5962640 taaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 2733416 - 2733512
Alignment:
Q  105 ttgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttat 201  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||| || ||||||||||||| |||||||||| | ||||||||||| ||| ||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcctaaaatttat 2733512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  74 gtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggac 173  Q
    |||||||||||| |||||||||| ||||||| |||| |||  ||||||||| ||||||||||| || ||   |||| |||||| | ||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaa-atgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggac 52269275  T
Q  174 caaaaatgtaattaag 189  Q
    ||||| ||||||||||    
T  52269276 caaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 17112442 - 17112282
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||| |||||| ||| ||||| |||||  | ||||| || ||||||||||||||||||| ||||| |||||||||||||||  |||| |||| |||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaa-tgataattgaaggactattttattctattt 17112344  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||    || | |||| |||||||  ||||||| ||| ||||||| ||||||||||||    
T  17112343 taaaaggg-cctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||||| | ||||||||||| | ||| | |||||||||||| |||||||||||||||||||| ||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 47827036 - 47827108
Alignment:
Q  94 aaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaaca 166  Q
    ||||||||||||| ||||||  ||||||||| ||||||||||| | ||| | |||||||||||||||||||||    
T  47827036 aaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaaca 47827108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  20 gggggtaggtctaaaactgtcatttctctacgttt 54  Q
    ||||||||||||||||||||||||||||| |||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 17088326 - 17088242
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaa 98  Q
    |||||||| |||||||||||||||| ||||||||| | ||| || ||   ||||| || |||||||| |||| ||||| ||||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgcatttctgaagttgaaaataggaggtaggactaaaattgcaaaaaaaaa 17088242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 11090695 - 11090524
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccg 11090597  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  11090596 ttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 40027316 - 40027135
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaa-tgataattgaaggac 40027218  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaa 196  Q
    ||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  40027217 cgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccttaaa 40027135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 239528 - 239352
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 239430  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  239429 cgttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 239352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 1978284 - 1978107
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaa-tgataattgaaggac 1978186  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1978185 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagcct 1978107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 40815714 - 40815898
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaagggc 40815812  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaactt 199  Q
    ||||||||||| ||||||||||| |  || ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  40815813 cgttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaaaactt 40815898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 43058509 - 43058333
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaaca-aaaatgataattgaaggac 43058411  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| |||||||| || ||||| ||||| |||||| |||||||||||||||| ||||| ||||||||||||    
T  43058410 cgttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 18451200 - 18451377
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaac-aaaaatgatatttgaaggac 18451298  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
      ||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  18451299 tattttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18451377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 22374496 - 22374319
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| || ||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 22374398  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22374397 cgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 22374319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 26538273 - 26538093
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| || ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 26538175  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    || |||||||| ||||||||||| || || ||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  26538174 cgctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccttaa 26538093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 3025641 - 3025472
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaa-tgatacttgaaggac 3025544  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 185  Q
    ||||||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3025543 cgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  17 atagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgt 116  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaaca-aaaatgatagttgaaggaccgt 14432217  T
Q  117 tttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||| | ||||||||||| | ||| |||||| |||||||||||||||||||||||||||| |||||||||    
T  14432216 tttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 28616788 - 28616613
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggacc 114  Q
    |||||||||||||||||||||||  |||||||| ||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaa-tgataattgaaggacc 28616690  T
Q  115 gttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28616689 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 192
Target Start/End: Original strand, 26538454 - 26538625
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    |||||||||||||||||||||||||||| ||||| ||| |  | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgtttt 26538552  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26538553 gttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 26538625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaac-aaaaatgataattgaaggacagttttg 8425834  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||| ||||||||||| ||||| | |||||||||||| ||||||||| || ||||||| |||||||||    
T  8425835 ttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 7446730 - 7446892
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| |||||||||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 7446828  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| ||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  7446829 taaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcct 7446892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 50 - 193
Target Start/End: Complemental strand, 20444889 - 20444747
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||| ||||||    
T  20444889 cgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaa-tgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcctt 20444747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 18450991 - 18450828
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaa-aaaaaatgataattgaaggaccgttttgttctgttt 18450893  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18450892 taaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 18450828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 7446519 - 7446340
Alignment:
Q  16 catagggggtaggtctaaaa----ctgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaagg 111  Q
    ||||||||||| ||||||||    ||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||||| |    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaa-tgataattgaatg 7446422  T
Q  112 accgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||||| ||||||||||| ||||| | |||| ||||||| |||||||||||||| ||||| ||||||||||||||    
T  7446421 accgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcctt 7446340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 40815506 - 40815347
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  ||||| | || ||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaagaaccgttttgttatgttt 40815408  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  40815407 taaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 22374709 - 22374871
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 22374807  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| | ||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  22374808 taaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 22374871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 35781068 - 35781207
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||| | ||| | ||||    
T  35781068 cgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaa-atgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 40027524 - 40027687
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| |||||| || ||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||| |||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaagaccgttttgttctgttt 40027622  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  40027623 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctt 40027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 43058717 - 43058878
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa--tgataattgaaggaccattttgttctgttt 43058814  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||| | ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  43058815 taaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 43058878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 28847123 - 28847241
Alignment:
Q  73 ggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgagga 172  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| | ||||| |||||||||||||| ||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgagga 28847221  T
Q  173 ccaaaaatgtaattaagcct 192  Q
    ||||||||||||||||||||    
T  28847222 ccaaaaatgtaattaagcct 28847241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 20440437 - 20440577
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||| |||||| ||||||||||| |||||||||| ||||||| |||| |||||||||||||| ||||||||||| ||||| ||||||    
T  20440437 cgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaa-atgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 20440534  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  20440535 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20440577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 35779848 - 35779708
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| |||||||| || ||||| | ||||    
T  35779848 cgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaa-tgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||| | ||||||||||||||||||| ||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 28616998 - 28617161
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||  |||||||| ||||| |||||  | ||||| || |||| ||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaa-atgataattgaaggaccattttgttctgttt 28617096  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||  || || ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28617097 taaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 28617161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 11090904 - 11091066
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||| |||||||| ||| ||||| |||||  | ||||| || | ||||||||||||| |||||| || |||||||||||||||||||||||||| |||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataa-tgataattgaaggaccgttttgttctgttt 11091002  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11091003 taaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||| ||||||||| ||||||||| ||||||||||||||||| ||||||||| |||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaa-atgataattgaaggaccattttgttctgttt 239834  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||| |||||    
T  239835 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 1978528 - 1978655
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || |||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| ||||| | ||||||||||||||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaa-atgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaa 1978626  T
Q  164 acacgaggaccaaaaatgtaattaagcct 192  Q
    |||| |||||||||| |||||||||||||    
T  1978627 acacaaggaccaaaagtgtaattaagcct 1978655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  31 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaa-tgataattgaag-accgttttgttctgtttt 8425417  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||| |||| ||| | |||||||||||||||||||||| |||||||||| |||||||||    
T  8425416 aaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 191
Target Start/End: Original strand, 3025848 - 3026006
Alignment:
Q  31 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||||||||||||| | |||||||||||||||||||||| | ||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-taataattgaaggaccgttttgtt-tgtttt 3025945  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||| || || | ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  3025946 aaaagggcagaaccaatttcgtgagtaagccaaaacacgaggacc-aaaatgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || ||||||| ||||||||||||||||| | |||||||||| ||| |||| |||| |||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaa-taataattgaagaaccattttattctgttt 14432623  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||| || | ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  14432624 taaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 8972377 - 8972239
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||||| |||  ||||||||| |||| |||||| | ||| | ||||    
T  8972377 cgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaa-tgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||| | ||||||||||||||||||||| ||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 15551639 - 15551501
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||| ||||||||  ||||||| | |||||||| || | ||| | ||||    
T  15551639 cgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaa-tgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttc 15551541  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||||  |||||||||||||||||||| ||||||||||    
T  15551540 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 16195049 - 16195125
Alignment:
Q  192 ttaaacttattacacaagttcattgttctcaaaacatggttatgc--taagaacaactactgctaccgttttaataa 266  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  16195049 ttaaacttattacacaagttccttgttctcaaaacatggttatcctataagaacaactactgctaccgttttaataa 16195125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 15552458 - 15552596
Alignment:
Q  49 acgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagttt 148  Q
    ||||||||||||   ||||||| |||||||||||||||| |||| |||||||||||||||| |||  ||||||||| |||||||||||  |||  | |||    
T  15552458 acgtttttggagggcaaaatggagggtaggacgaaaaatacaac-aaaaatgataattgaatgacaattttgttctgttttaaaaggg-cggatcatttt 15552555  T
Q  149 cgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||||||||||||||||  | |||||||| ||||||||||    
T  15552556 cgtgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 28143400 - 28143576
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| ||  ||||||| |||| ||||  |||| |||||| || | ||||    
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgca--aaaacatgatagtttagggac 28143497  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
      ||||||||  ||| |||  || ||||| | |||||||||  || |||||  |||||||||||| || ||||||||||    
T  28143498 gattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcct 28143576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 42192724 - 42192791
Alignment:
Q  127 tttaaaag-ggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| |||||||| | |||||||||| || |||||  |||||||||||| ||||||||||||||    
T  42192724 tttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctt 42192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 1e-75; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 37786943 - 37786765
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 37786845  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||| | ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  37786844 cgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 37786765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 19830596 - 19830423
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 19830498  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  19830497 cgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19830423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 19590701 - 19590525
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaa-tgataattgaaggac 19590603  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19590602 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 32004985 - 32005159
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaac-aaaaatgataattaaaggaccg 32005083  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||| ||||||||||| | ||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  32005084 ttttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 38858819 - 38858641
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaaca-aaaatgataattgaatgac 38858721  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||| ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  38858720 cgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctt 38858641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 2659211 - 2659386
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaac-aaaaatgataattgaatgaccg 2659309  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||| ||||||||||| | ||| |||||| ||| ||||||||||| |||||||||||| |||||||||||||    
T  2659310 ttttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcct 2659386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 35289272 - 35289447
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    |||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaa-tgataattgaaggaccg 35289370  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  35289371 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 35289447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 29100220 - 29100398
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaac-aaaaatgataattgaaagac 29100318  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||| ||||||||||| ||||| | ||| |||||||| |||||||||||||||||||| ||||||||| ||||    
T  29100319 cgttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaaacctt 29100398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 34534162 - 34534337
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccg 34534260  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||| ||||||| ||| ||||  ||||||||||||||||||||||||||| ||||||| | |||||||||||    
T  34534261 ttttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagcct 34534337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 4641616 - 4641428
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaatgac 4641518  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttatta 203  Q
    ||||||||| | ||| ||||| | ||||| ||||||||||||| ||||||||||||||||||||| ||||||||| |||| || ||||||    
T  4641517 cgttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaaaccttgaatttatta 4641428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 185
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaa-atgataattgaaggaccgttttg 23953203  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 185  Q
    |||| |||| ||||||  |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  23953204 ttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 19590909 - 19591071
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 19591007  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  19591008 taaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcct 19591071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 4478076 - 4478242
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||||  | ||     
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaac-aaaaatgataattgaaggacaatgtta 4478174  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||| ||||    
T  4478175 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 2659000 - 2658838
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| |||||||||||  | ||||| || |||| |||||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctattt 2658902  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  2658901 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcct 2658838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 38859025 - 38859187
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataatggaaggaccgttttgttctgttt 38859123  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  38859124 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 38859187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 29100011 - 29099862
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||| ||||||||| ||| |  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 29099913  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaa 179  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  29099912 taaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaaa 29099862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 32004774 - 32004613
Alignment:
Q  31 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||||||||||||||| ||||| |||||  | ||||| || |||||| |||||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctgtttt 32004676  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||| ||||  | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32004675 aaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 32004613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 38161091 - 38160950
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||||||||  ||||||||| ||||||||||| |||| || ||||    
T  38161091 cgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaa-taataattgaaggacaattttgttctgttttaaaagggcaggattattttc 38160993  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  38160992 gtgagtaggccaaaacccgaggaccaaaagtgtaattaagcct 38160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 37787153 - 37787313
Alignment:
Q  32 aaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttta 130  Q
    ||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaagaaccgttttgttctgattta 37787251  T
Q  131 aaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||| | ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  37787252 aaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 37787313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 34533952 - 34533790
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||| |||||||||||| |||||||||||  | ||||| || ||||||||| ||||||||||||||| ||||||||||| |||| |||| |||| |||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaa-tgataattgaatgaccattttattctgttt 34533854  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||| | | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34533853 taaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 34533790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 35289019 - 35288903
Alignment:
Q  74 gtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggac 173  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||| |||    
T  35289019 gtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgac 35288921  T
Q  174 caaaaatgtaattaagcc 191  Q
    ||||| ||||||||||||    
T  35288920 caaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 19830804 - 19830966
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||||||||||||  |||| |||||  | ||||| || |||||||| ||||||||||||||| ||||||||||||| ||||||||||| | |||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaa-atgataattgaagtaccgttttgttatgttt 19830901  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||  ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  19830902 taaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 19830966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 28583577 - 28583438
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgt 151  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| || | ||||||||||| || || | | || |    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaa-tgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcat 28583479  T
Q  152 gagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  28583478 gagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28583438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| | |||  | ||||| ||  ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 4641926  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||  ||||| |||   ||||||||||||||||||||||||||||| |||||||||    
T  4641927 taaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 23952848 - 23952729
Alignment:
Q  73 ggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagta-ggccaaaacacgagg 171  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| | ||| | ||||||||||| || ||||||||||||    
T  23952848 ggtaggacgaaaaatgcaaccaaaa-tgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgagg 23952750  T
Q  172 accaaaaatgtaattaagcct 192  Q
    ||||||| |||||||||||||    
T  23952749 accaaaagtgtaattaagcct 23952729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 28584327 - 28584466
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||||||| ||||||||||  | ||| | ||||    
T  28584327 cgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaa-atgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    |||| ||||||||| ||||||||| |||| |||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 4887824 - 4887783
Alignment:
Q  265 aagattacgttatttcctgttatgttaattaaactagttact 306  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4887824 aagattacgttatttcctgttatgttaattaaactagttact 4887783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgttttt 56  Q
    |||||||||||||||||||||||||||| |||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 35579074 - 35579028
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggag 60  Q
    |||||||||| ||||||||||| |||||||||||| ||||| |||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggag 35579028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 35579256 - 35579298
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgttttt 56  Q
    |||||||||||||||||||||||||| ||||| || |||||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgttttt 35579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 15828010 - 15828188
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggac 15828108  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15828109 cgttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 15828188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 20741276 - 20741099
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgatatttgaaggac 20741178  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    | ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20741177 cattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 20741099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 10900299 - 10900475
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaaggac 10900397  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  10900398 cgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 11276951 - 11277127
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaagaac 11277049  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  11277050 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 18257313 - 18257136
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaa-tgataattgaaggac 18257215  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  18257214 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 18257136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 2319832 - 2319671
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgtttt 2319734  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2319733 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 2319671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 11445163 - 11444975
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 11445065  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttatta 203  Q
    | |||| |||| ||||||| ||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  11445064 cattttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaatttatta 11444975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 1149802 - 1149977
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggacc 114  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tggtaattgaaggacc 1149900  T
Q  115 gttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||| ||||||||||| | ||| |||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  1149901 gttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 12935528 - 12935703
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaa-atgataattgaaggaccg 12935626  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||| ||||| || || ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  12935627 ttttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagcct 12935703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 31470685 - 31470860
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggac 31470783  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||||| ||||||||||| || || |||||||||||||||| ||||||| |||||||||| |||||||||||    
T  31470784 cgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 28472812 - 28472636
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaa-tgataattgaatgac 28472715  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    | ||||||||| |||||||| || ||||| | |||||||||| |||||||||||||||||||||| |||||||||||||    
T  28472714 cattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 28472636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 29860001 - 29859825
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaa-tgataattgaatgac 29859904  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    | ||||||||| |||||||| || ||||| | |||||||||| |||||||||||||||||||||| |||||||||||||    
T  29859903 cattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 29859825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaa-atgataattgaaggac 2322685  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| |||||||| || | |||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  2322686 cgttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaaggac 18505386  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
     |||||||| | ||||||||||| ||||  |||||||||||||| |||||||||||||||||||| | |||||||||    
T  18505387 tgttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    |||||||||||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgtttt 10900011  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  10900010 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 12935318 - 12935156
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 12935220  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12935219 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 12935156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 23074164 - 23073997
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||            |||||||||||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg------------ataattgaaggac 23074077  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23074076 cgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 23073997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 11445371 - 11445533
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 11445469  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11445470 taaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11445533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 22219737 - 22219899
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||||||||||||  |||| |||||  | ||||| || ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 22219835  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22219836 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 22219899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 23075512 - 23075674
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| | |||||||||  ||||| | || ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 23075610  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23075611 taaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23075674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 27 - 191
Target Start/End: Complemental strand, 4811535 - 4811372
Alignment:
Q  27 ggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttt 126  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| |    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaa-tgataattgaaggaccgttttattctat 4811437  T
Q  127 tttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||| | ||| |||||||||||||| |||||| ||  ||||||||| ||||||||||||    
T  4811436 tttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 20741485 - 20741651
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa--aatgataattgaaggaccgttttgttcttt 126  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||| ||||  |||||||||||||||||||||||||||| |    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  127 tttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcctt 20741651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 18505080 - 18504922
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || |||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaa-tgataattgaagaaccgttttgttctgttt 18504982  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  18504981 taaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 11276760 - 11276588
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    |||||||| ||||||||||||||||||| |||||||||||  | ||||| || |||||||||||||||| |||||||| ||| |||||||||||| ||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaa-tgacaattgaaggaccatttt 11276662  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||| ||||||||||||||||  |||||| ||||||| |||||||||| |||| |||  ||||||||||||||    
T  11276661 gttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcctt 11276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 18257521 - 18257682
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||||||| | |||||    |||||  | |||||||||||||||| |||||||| | |||||||||||||||||||||||| |||    
T  18257521 ctaaaactgtcatttctctacgtgtatggagttggaaaatatgaggtaggacgaaaaatgtaacaaaaa-taataattgaaggaccgttttgttctgttt 18257619  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  18257620 taaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 31470476 - 31470311
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| | ||||||||| ||| |||||||||| |||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-taataattgaatgactgttttgttctgttt 31470378  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    |||||| | | ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  31470377 taaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccttaa 31470311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 29033575 - 29033436
Alignment:
Q  50 cgtttttggag-aataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagttt 148  Q
    ||||||||||| || |||||||||||||||| ||||  ||||||||||| |||||| |||||||| |||||||||| ||||||||||| ||||| | |||    
T  29033575 cgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaa-tgataactgaaggacagttttgttctgttttaaaagggcaggaccaattt 29033477  T
Q  149 cgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||| ||||||||| ||||||||||||| ||||||||||    
T  29033476 cgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 3835135 - 3835274
Alignment:
Q  54 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtga 153  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||||  ||||||||| |||||||  || ||||| | ||||||||    
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaa-atgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtga 3835233  T
Q  154 gtaggccaaaacacgaggaccaaaaatgtaattaagcctta 194  Q
    ||||| ||||||||  ||||||||| ||||||||| |||||    
T  3835234 gtaggtcaaaacacatggaccaaaagtgtaattaaacctta 3835274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 1149553 - 1149464
Alignment:
Q  103 aattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 1149464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 15827766 - 15827639
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgt--tttgttcttttttaaaagggtaggactagtttcgtgagtaggcca 161  Q
    ||||| || ||||||||||||||||||||||||| ||||| ||||||||||||  |||||| | ||||||||||  || || ||||||||||||| ||||    
T  15827766 aaaataggaggtaggacgaaaaatgcaacaaaaa-tgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagcca 15827668  T
Q  162 aaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||||||||||| |||||||||||    
T  15827667 aaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 29035042 - 29035180
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| | ||||||| |||| |||||||||||||||||||| ||||||| | ||||||  ||||||||| ||||||||||| |  || | ||||    
T  29035042 cgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaa-atgataactaaaggacaattttgttctgttttaaaagggcataaccaatttc 29035140  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||||||| ||||||||||||| |||| ||||||||||    
T  29035141 gtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 18296284 - 18296144
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||| |  |  | |||     
T  18296284 cgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaa-tgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||| | |||||||||||||| |||| | |||||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaagcct 18296144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 4811675 - 4811801
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || |||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||  | | ||  |||||| |||||||||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaa 4811773  T
Q  164 acacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||| ||||| | ||||||||||    
T  4811774 acacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 35163557 - 35163639
Alignment:
Q  15 gcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 97  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||   ||||| || |||||||| |||| ||||| |||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 22534225 - 22534270
Alignment:
Q  146 tttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||| || ||||| ||||||||||||| ||||||||||||    
T  22534225 tttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 32836367 - 32836407
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgttt 54  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  32836367 agcataaggggtaggtctaaaactgttatttctcttcgttt 32836407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 4969 - 4792
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 4871  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4870 cgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 4792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 5222 - 5334
Alignment:
Q  76 aggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggacca 175  Q
    ||||||||||||||||||||| ||||||||||||  |||||||| |||| ||||||||||  | ||| |||||||||| |||||||||||||||||||||    
T  5222 aggacgaaaaatgcaacaaaa-atgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggacca 5320  T
Q  176 aaaatgtaattaag 189  Q
    ||| ||||||||||    
T  5321 aaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 33109860 - 33109680
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 33109762  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    ||||||||||| ||||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  33109761 cgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaagtcttaa 33109680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaa-taaaaatgataattgaaggac 46193872  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  46193873 cgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaa-tgataattgaaggac 23494521  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494520 cgctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 25937846 - 25937669
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaa-tgataattgaaggac 25937748  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25937747 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcct 25937669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac 4219635  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
     |||||||| | |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4219634 tgttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 11153516 - 11153692
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||     
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaa-atgataattgaaggaa 11153614  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11153615 cgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 15523603 - 15523782
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgatacttgaaggac 15523701  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctta 194  Q
    | ||||||| | ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  15523702 cattttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcctta 15523782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 25447611 - 25447782
Alignment:
Q  20 gggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaa-atgataattgaaagaccgtttt 25447709  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  25447710 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagcct 25447782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 38962195 - 38962362
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttg 38962293  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||| |||||||||||  |||| |||||||||| ||| |||||||||||||||||||||||||||||||    
T  38962294 ttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 12234505 - 12234328
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaatgac 12234407  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| |||||||||| || ||||||||| ||||||||||| |||||||||||||    
T  12234406 cgttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcct 12234328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 22434547 - 22434718
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaac-aaaaatgataattgaatgac 22434644  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||||| | ||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22434645 cgttttgttc-tgtttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 51020973 - 51020796
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggat 51020875  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| ||||| |||| |  ||||||||| ||||| ||||| |||||||||||||    
T  51020874 cgttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcct 51020796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 22170306 - 22170483
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaatgac 22170404  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||| | |||||||| || ||||| | |||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  22170405 cgttttgttttgttttaaaaaggcaggac-aatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcctt 22170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 48526371 - 48526195
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaa-tgataattgaaggac 48526274  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||  | |||||| |||||||| ||||||||||| ||||||| |||||||||||||    
T  48526273 cgttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 2118665 - 2118842
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaa-atgataattgaatgac 2118762  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||| | |||||||||| |||||| |||||| |||| |||||||||||||| |||||||| ||||||||| ||||    
T  2118763 cgttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaaacctt 2118842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 54995437 - 54995609
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||| ||||||||||||||| |||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa--tgatacttgaaggac 54995534  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||||||||| | ||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  54995535 cgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 54995230 - 54995072
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 54995132  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  54995131 taaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 45082606 - 45082435
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatg-ggggtaggacgaaaaatgcaac-aaaaatgataattgaaggac 45082509  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||||||||| |  || || ||||||||||| ||||||||||| ||||||||  ||||||||    
T  45082508 cgttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 28 - 191
Target Start/End: Complemental strand, 46193568 - 46193405
Alignment:
Q  28 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttt 126  Q
    ||||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggacctttttgttctgt 46193470  T
Q  127 tttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  46193469 tttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 15523395 - 15523234
Alignment:
Q  31 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||||||||||||||| ||||| | |||  | ||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaa-aaaaaataataattgaaggaccgttttgttctgtttt 15523297  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15523296 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15523234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 22434340 - 22434179
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaa-tgataattgaaggaccgttttgttctgttt 22434242  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  22434241 taaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 25447408 - 25447247
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 25447310  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  25447309 taaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 45082808 - 45082979
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 45082906  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttat 201  Q
    |||||||| | ||| ||||||||||||| ||||||||||||||||||||| |||||||||||| |||| ||||    
T  45082907 taaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccataaaattat 45082979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 23494872 - 23494989
Alignment:
Q  74 gtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggac 173  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 23494970  T
Q  174 caaaaatgtaattaagcct 192  Q
    ||||| |||||||||||||    
T  23494971 caaaagtgtaattaagcct 23494989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 20470895 - 20471057
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||| |||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaatgaccgttttgttctgttt 20470993  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| | ||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  20470994 taaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 20471057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaac-aaaaatgatacttgaaggac 12503903  T
Q  114 cgttttgttc 123  Q
    ||||||||||    
T  12503904 cgttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 12234713 - 12234874
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| | ||| ||| |  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 12234811  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||| | ||  ||||||||||||||||||||||||||||||||||| | ||||||||||    
T  12234812 taaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 11153307 - 11153144
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| ||| |  | ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttattctattt 11153209  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| | ||| | ||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  11153208 taaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcctt 11153144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 44892553 - 44892692
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||| || || || | ||||    
T  44892553 cgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaat-ataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 48526565 - 48526728
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||||||||||||  |||| |||||  | ||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaag-tgataattgaaggaccgttttgttctgttt 48526663  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| | ||| |||||||||||||| |||||||||||||||||||| | ||||||| ||||    
T  48526664 taaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaaacctt 48526728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 4219943 - 4220101
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||| |||||||| |||||||| ||  | ||||| || |||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaatgaccattttgttctgttt 4220041  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||| | ||||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  4220042 taaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 25938090 - 25938218
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || |||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| ||||| | ||||||||||||||||||    
T  25938090 aaaataggaggtaggacaaaaaatgcaacaaaa-atgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaa 25938188  T
Q  164 acacgaggaccaaaaatgtaattaagcctt 193  Q
    |||| |||||||||| ||||||||||||||    
T  25938189 acacaaggaccaaaagtgtaattaagcctt 25938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 33109883 - 33110010
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||| | ||||||||| ||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaa 33109981  T
Q  164 acacgaggaccaaaaatgtaattaagcct 192  Q
    ||| ||||||||||| |||||||||||||    
T  33109982 acatgaggaccaaaagtgtaattaagcct 33110010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 51021180 - 51021341
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||| || ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||  |||||||| ||||||||||||||| | |||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa--tgataattaaaggaccgttttgttgtgttt 51021277  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| | ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  51021278 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 51021341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 18751760 - 18751597
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||| ||| ||||| |||||  | ||||| || ||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaa-tgatatttgaaggaccgttttgttctgttt 18751662  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| | ||| |||||  |||||||||||||||||||||||||||| ||||||||| ||||    
T  18751661 taaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaaacctt 18751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 2118419 - 2118295
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||||  ||||||| | ||||||||||| ||||| | ||||||||||||||||||    
T  2118419 aaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaa 2118321  T
Q  164 acacgaggaccaaaaatgtaattaag 189  Q
    |||| |||||||||| ||||||||||    
T  2118320 acacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 20958266 - 20958403
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||||   |||||||| ||||||||||| ||||| | ||||    
T  20958266 cgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaa-atgataattgaaggacatatttgttctgttttaaaagggcaggaccattttc 20958362  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||||||||| |||||||| |||| |||||||||||    
T  20958363 gtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  76 aggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggacca 175  Q
    |||||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||||||||  | ||| ||||||||||||||||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaa-tgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggacca 18764049  T
Q  176 aaaatgtaattaag 189  Q
    ||| ||||||||||    
T  18764050 aaagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgt 151  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||  ||||||| | ||||||||| ||| ||| | ||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaat-tgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgt 20957229  T
Q  152 gagtaggccaaaacacgaggaccaaaaatgtaa 184  Q
    ||||| |||||||| ||||||||||||||||||    
T  20957228 gagtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 193
Target Start/End: Complemental strand, 16691072 - 16690934
Alignment:
Q  54 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtga 153  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||   ||||||| | |||||||  || ||||| | ||||||||    
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtga 16690974  T
Q  154 gtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||  |||||||| |||||||||||||||||||| ||||    
T  16690973 gtagatcaaaacacaaggaccaaaaatgtaattaaacctt 16690934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 35363028 - 35363146
Alignment:
Q  73 ggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttt-ttaaaagggtaggactagtttcgtgagtaggccaaaacacgagg 171  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||||| | || || ||||||||||||||||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaa-tgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagg 35363126  T
Q  172 accaaaaatgtaattaagcc 191  Q
    | ||||| ||||||||||||    
T  35363127 atcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 43243686 - 43243807
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||| ||  ||||||||| ||||||||||| | ||| | ||||    
T  43243686 cgtttttggaggataaaatggggg-taggacaaaaaatgcaacaaaa-atgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  150 gtgagtaggccaaaacacgaggac 173  Q
    ||||||||||||||||||||||||    
T  43243784 gtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 48293734 - 48293593
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||| ||  ||||||| | |||||||  |  ||||  | ||||    
T  48293734 cgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaa-tgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 48293593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 44890657 - 44890518
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||| ||| ||||||||||||||| || ||||||||||||||||||| |||||| |||||   ||||||||| ||||||||||| | ||| | ||||    
T  44890657 cgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaat-ataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    |||| |||| |||||||| |||||||||| |||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 43281198 - 43281317
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgt 151  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||   |||||||||| ||  ||||||||| |||||||| || | ||| | ||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaa--tataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgt 43281295  T
Q  152 gagtaggccaaaacacgaggac 173  Q
    ||||||||||||||||||||||    
T  43281296 gagtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 48294947 - 48295088
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacg-aaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagttt 148  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||| |||||||||||| |||  ||||||| | |||||||  || | ||| | |||    
T  48294947 cgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaa-atgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  149 cgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||  |||||||||| |||||||||||||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 48713751 - 48713888
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||| | | ||| | ||||    
T  48713751 cgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaa-atgataattgaaggacaattttgttctgttttaaaagagcatgaccattttc 48713849  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
     ||||||||| |||||||||| |  |||| |||||||||    
T  48713850 atgagtaggctaaaacacgagaattaaaagtgtaattaa 48713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||| |||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggacaattttgttctgttt 12503499  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggacc 174  Q
    ||||| ||  |||  ||||||||||||| | |||||||||||||||    
T  12503498 taaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 48708431 - 48708294
Alignment:
Q  54 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtga 153  Q
    ||||||| |||||||| | |||||||  | |||||||||||||| ||||||||||||||| |||||||| | ||||||||||| ||||  | |||||||     
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaa-tgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtgg 48708333  T
Q  154 gtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
     |||||||||||||  ||||||||| |||||||||||||    
T  48708332 ttaggccaaaacacatggaccaaaagtgtaattaagcct 48708294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 194
Target Start/End: Original strand, 10258306 - 10258435
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| ||||||| ||| |||| ||||||||||| |||||||||||  ||  ||||  ||| ||||||||||| ||||| | |||| ||||||||||| |    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaa-tgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccaca 10258404  T
Q  164 acacgaggaccaaaaatgtaattaagcctta 194  Q
    ||||||||||||||| |||||||||||||||    
T  10258405 acacgaggaccaaaagtgtaattaagcctta 10258435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 43242410 - 43242323
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggta 138  Q
    ||||||||||  ||||||| || ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||    
T  43242410 cgtttttggatgataaaattggaggtaggacgaaaaatgcaa-aaaaaatgataattgaatgaccgttttgttctgttttaaaaaggta 43242323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacg 81  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 17504149 - 17503970
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| ||||| |||| |||||| ||  |||||    
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaaacatgatagtt-taggac 17504052  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
     ||| |||||  ||| |||  || ||||| | |||||||||  || |||||  |||||||||| | | ||||||||||||||    
T  17504051 ggttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagccttaa 17503970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 16318251 - 16318323
Alignment:
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||| ||||||||||| ||||  ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 16318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 16691481 - 16691616
Alignment:
Q  54 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtga 153  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| |||||| ||||||  |||||||  | ||||||  || ||||| | ||||||||    
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaac-aaaaataataattaaaggacaattttgtt-atgtttaaagaggcaggaccattttcgtga 16691578  T
Q  154 gtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||| ||||||||  ||| ||||| ||||||||||||    
T  16691579 gtaggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 55189625 - 55189528
Alignment:
Q  94 aaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||||||||| |||  ||||||||| ||||||||||| |  || | |||  ||| |||| ||||||||||||| ||||||| ||||||||||    
T  55189625 aaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatataattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgttt 54  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgttt 54  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 44220782 - 44220861
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttta 130  Q
    ||||||||||| |||||||  ||||||| |||||||||| ||| ||||||||||| ||||||||  ||||||||| |||||    
T  44220782 cgtttttggaggataaaattaggggtagaacgaaaaatgaaac-aaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 40160269 - 40160092
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||||||||| | |||| | |||   ||||| || |||||||| |||| ||||| |||| || ||| || | ||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctccatgtttatagagttgaaaataggaggtaggactaaaactgcaa-aaaacat-atagtttagggac 40160172  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
     |||||||||  ||| |||  || | ||||| |||||||||  ||  ||||  || ||| ||||||||||||||||||||    
T  40160171 ggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaagcctt 40160092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 55677439 - 55677509
Alignment:
Q  127 tttaaaag-ggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaa 196  Q
    |||||||| |||||||| | |||||||||| || ||||| || |||||||||| |||||||||||||||||    
T  55677439 tttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagccttaaa 55677509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 39555946 - 39556122
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaa-tgataattgaaggac 39556044  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    | ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39556045 cattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 31779021 - 31779198
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaa-atgataattgaaggac 31779119  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31779120 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 31779198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 20840734 - 20840559
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccg 20840636  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20840635 ttttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 20840559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 5137156 - 5136983
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 5137058  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||||||||| | ||| | |||||||||| |||||||||||||||||||||| |||||||||    
T  5137057 cgttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 41046778  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||||||||| | ||| |||||||| | |||||||||||||||||||||||| |||||||||    
T  41046777 cgttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 37727105 - 37726927
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 37727007  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||| | ||||||||||| || || |||||||| || || |||||||||||||||||||| ||||||||||||||    
T  37727006 cgttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcctt 37726927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 24300925 - 24301102
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgatactcgaaggac 24301023  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||| | |||||||| || ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24301024 cgttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 24301102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 23644638 - 23644460
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggac 23644540  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
     |||||||||| |||||||| || ||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  23644539 tgttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctt 23644460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 32535330 - 32535508
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa----atgataattgaagg 111  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  112 accgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 17464860 - 17465040
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaa-tgcaacaaaaaatgataattgaagga 112  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaa-atgataattgaagga 17464958  T
Q  113 ccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctta 194  Q
    |||||||||||| ||||||||||||  ||| |||||| || |||||||||||||||||||||||||||||||||||||||||    
T  17464959 ccgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcctta 17465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 48453144 - 48452988
Alignment:
Q  35 actgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaag 134  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||     
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttttaaaat 48453046  T
Q  135 ggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    || ||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  48453045 ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcct 48452988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 27393946 - 27394125
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| | |||||||||||||| |||||||||||||||     
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaa-atgataattgaaggat 27394044  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctta 194  Q
    ||||||||||| |||||||| || |||||   ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27394045 cgttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctta 27394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaaggac 25853694  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    | ||||||||| |||||||| |  | ||| ||||||||||||||  ||||||||||||| ||||| ||||||||||    
T  25853695 cattttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 26274936 - 26275108
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaac-aaaaatgataattgagggac 26275033  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||| |||||||| ||| |||||| | |||||||    
T  26275034 cgttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 26837725 - 26837901
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaac-aaaaatgatacttgaatgac 26837823  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| |||| |||||| || || |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  26837824 cgttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 26837901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 30104657 - 30104481
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaa-tgataattgaaggac 30104560  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||| | || | ||||||||||| ||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  30104559 cgttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 30104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 43973610 - 43973441
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttg 120  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggaccgttttg 43973512  T
Q  121 ttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||| ||||||||||| |  |  | ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  43973511 ttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||| ||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaagtac 22425280  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatta 187  Q
    ||||||||||| ||||| ||||| | ||| || |||||||||||||| ||||||||||||||||| ||||||||    
T  22425281 cgttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 43973824 - 43973986
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| ||| | || ||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||| |||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaatgaccgttttgttctgttt 43973922  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43973923 taaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 43973986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 27393822 - 27393657
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| ||| |  | ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 27393724  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    ||||| || ||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  27393723 taaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccttaa 27393657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 37727314 - 37727475
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 37727412  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||| | ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  37727413 taaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 20840945 - 20841108
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 20841043  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||| || ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  20841044 taaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcctt 20841108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 39555739 - 39555576
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctgttt 39555641  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39555640 taaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 39555576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 17464652 - 17464490
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||| ||||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 17464554  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| | ||| ||||||| || |||||||||||||||||||||||| |||||||||||||    
T  17464553 taaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcct 17464490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 31778814 - 31778651
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| ||||||  |||||||||||||||||| |||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataaacgaaggaccgttttgttctgttt 31778716  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  31778715 taaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcctt 31778651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 4275748 - 4275910
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattaaaggaccgttttgttctgttt 4275846  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||| | | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4275847 taaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 4275910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 25612382 - 25612519
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||| ||||||||||| ||||| | ||||    
T  25612382 cgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 25853395 - 25853234
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||| |||||||| ||||| |||||  | ||||| || ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctattt 25853297  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||| | ||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  25853296 taaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 29801798 - 29801962
Alignment:
Q  28 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttt 126  Q
    |||||||| |||||||||||| ||||| |||||  | ||||| || ||| |||||||||||||||||||| |||||||||||| |||||||||||||| |    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaa-atgataattgaaagaccgttttgttctgt 29801896  T
Q  127 tttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  29801897 tttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcct 29801962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 5137365 - 5137527
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaa-atgataattgaaggaccattttgttctattt 5137463  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| || || |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  5137464 taaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 23644849 - 23645010
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||  | |||  | ||||| || ||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaa-atgataattgaatgaccgttttgttctgttt 23644947  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||    
T  23644948 taaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 30098147 - 30098311
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||| ||||| ||||| || ||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccattttgttctgttt 30098245  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctta 194  Q
    |||||||| | ||| ||||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  30098246 taaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcctta 30098311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 26837521 - 26837363
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||| ||| | ||     
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgtttcgttatgtta 26837423  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||| ||||| | ||||||||||||||||||| || ||||||||||||||||||||    
T  26837422 taaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 32535085 - 32534957
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| | ||||||||||| ||||||    
T  32535085 aaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaa 32534987  T
Q  164 acacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||||||| ||||||||| ||||    
T  32534986 acacgaggaccaaaagtgtaattaaacctt 32534957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 32697105 - 32697244
Alignment:
Q  49 acgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagttt 148  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| ||  ||||||||| |||||||||||   ||||| |||    
T  32697105 acgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaa-atgataattgaagcacaattttgttctgttttaaaagggcgtgactaattt 32697202  T
Q  149 cgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  32697203 cgtgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 26274728 - 26274565
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||||||||  || ||||| |||||  | ||||| || |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 26274630  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| ||||| |||||||||||||| |||||| || |||| ||||||||||||||| ||||    
T  26274629 taaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaaacctt 26274565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 22424975 - 22424813
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 22424877  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||  || || |||||||| |||||||  ||||||||| ||||||| |||||||||||||    
T  22424876 taaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcct 22424813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 29801477 - 29801356
Alignment:
Q  69 ggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacg 168  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| ||||| ||||||| |||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaa-tgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacg 29801379  T
Q  169 aggaccaaaaatgtaattaagcc 191  Q
    | |||||||| ||||||||||||    
T  29801378 atgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 50116814 - 50116954
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||| |||| |||||||||||||| ||| ||||||| | ||| | ||||    
T  50116814 cgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaa-atgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttc 50116912  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||| | ||||||||||||| ||||| ||||||||||||    
T  50116913 gtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 23228414 - 23228552
Alignment:
Q  51 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcg 150  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||  |||||||| |||| ||||||| | ||  | |||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaa-tgataattgaaggacaattttgttcgtttt-aaaagggcatgatcattttcg 23228511  T
Q  151 tgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  23228512 tgagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 24300717 - 24300555
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||| ||||||||| ||||||||||| |||||||||||| |||||||| |||| |||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaa-tgataattgaagaaccgttttattctgttt 24300619  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||  ||||| |||||||||| || |||||||||||| |||||||||||||||||| ||||    
T  24300618 taaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaaacctt 24300555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 45966076 - 45965937
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgt 151  Q
    ||||||||| | |||||||||| ||| ||||||||||||||| ||| ||||||| |||||||  ||||||| | ||||||||| | |||| ||  |||||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaa-tgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgt 45965978  T
Q  152 gagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  45965977 gagtatgccaaaacacgaggaccaaaagtgtaattaagcct 45965937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 51474738 - 51474880
Alignment:
Q  50 cgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagttt 148  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||| ||||||| | ||||||  ||||||| | ||||||||||| | ||| | |||    
T  51474738 cgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaa-atgataactaaaggacaattttgttatgttttaaaagggcatgaccaattt 51474836  T
Q  149 cgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||||||||| | ||||||| |||||||||||||    
T  51474837 cgtgagtatgccaaaacacgggaaccaaaagtgtaattaagcct 51474880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 41047083 - 41047218
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggac-gttttattctgttt 41047180  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaaca 166  Q
    |||||||  || || |||||||||||||||||||||||    
T  41047181 taaaaggacagaaccagtttcgtgagtaggccaaaaca 41047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 25419284 - 25419157
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaa-ggaccgttttgttcttttttaaaagggtaggactagttt 148  Q
    |||||||||||  |||||||||||  ||||| |||| ||||| ||||||||||||||||| |||| |||||||||| ||||||||||| || |||| |||    
T  25419284 cgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaattt 25419187  T
Q  149 cgtgagtaggccaaaacacgaggaccaaaa 178  Q
    |||||||| || ||||||||| ||||||||    
T  25419186 cgtgagtaagctaaaacacgaagaccaaaa 25419157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 37220697 - 37220556
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||| ||||||||  |||| |||| ||||||||| | | ||    | |     
T  37220697 cgtttttggaggataaaatggagggtaggacgaaaagtgcaaca-aaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 37220556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  76 aggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggacca 175  Q
    ||||| |||| ||||||||||| ||||||  |||||||  ||||||||| ||||||||||| ||||| | |||||||| ||| |||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaa-tgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggacca 51473444  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  51473443 aaagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 25420548 - 25420684
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgt 151  Q
    |||||| || ||||||||||||||| ||||||||||||||| |||||| |||||||||||||  |||| |||| |||||||||||   ||  | ||||||    
T  25420548 tttttgaaggataaaatggggggtatgacgaaaaatgcaac-aaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgt 25420646  T
Q  152 gagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||||| ||||| |||| || ||||| ||||||||||    
T  25420647 gagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 37222030 - 37222117
Alignment:
Q  105 ttgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||  |||||||||| |||||||| || ||||| | ||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcct 37222117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 18010162 - 18010271
Alignment:
Q  62 ataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggcca 161  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||  ||  ||||||||| |||||||||||  | || | |||||||||||| | |    
T  18010162 ataaaatggagggcaggacgaaaaatgcaac-aaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacga 18010260  T
Q  162 aaacacgagga 172  Q
    ||||| |||||    
T  18010261 aaacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 49407972 - 49407925
Alignment:
Q  13 tagcatagggggtaggtctaaaactgtcatttctctacgtttttggag 60  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggag 49407925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 55192293 - 55192222
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaa 85  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| || |||||||| ||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggg 74  Q
    |||||| | |||| ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 37075864 - 37075780
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaa 98  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||   |||||  | |||||||| |||| ||||| ||||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataagaggtaggactaaaactgcaaaaaaaaa 37075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 23227396 - 23227349
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 97  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  23227396 cgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaa 23227349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 27200062 - 27200108
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggag 60  Q
    |||||| |||||||||||||| ||||||||||||| ||||| |||||    
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggag 27200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 32695748 - 32695706
Alignment:
Q  146 tttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||| |||||||||||| | |||||||||||||||||||||    
T  32695748 tttcgtaagtaggccaaaatatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 52375812 - 52375878
Alignment:
Q  127 tttaaaag-ggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| |||||||| | |||||||||| || |||||  |||||||||||| |||||||||||||    
T  52375812 tttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcct 52375878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 3e-73; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 12572040 - 12571862
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggt-aggacgaaaaatgcaacaaaaaatgataattgaagga 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaa-tgataattgaatga 12571942  T
Q  113 ccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12571941 ccgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 12571862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 19176659 - 19176836
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggac 19176757  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  19176758 cgttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19176836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 9930026 - 9930204
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgatagttgaaggac 9930124  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    | ||||||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9930125 cattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctt 9930204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 41681306 - 41681133
Alignment:
Q  17 atagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgt 116  Q
    |||||||||| || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaa-tgataattgaaggaccgt 41681209  T
Q  117 tttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41681208 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 41681133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 31133396 - 31133219
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgatacttgaaggac 31133298  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
     |||||||| | |||||||||||  |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  31133297 tgttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcct 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 33328334 - 33328156
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaa-tgatacttgaaggac 33328236  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    ||||||||||| ||||||||||| | ||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  33328235 cgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctt 33328156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 44831614 - 44831791
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||  ||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaac-aaaaatgataattgaataac 44831712  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  44831713 cgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 44831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 11656630 - 11656454
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggacc 114  Q
    |||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tggtaattgaaggacc 11656532  T
Q  115 gttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||||  ||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11656531 gttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11656454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||     
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaac-aaaaatgataattgaaggat 13224718  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatta 187  Q
     |||||||||| ||||||||||| | ||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  13224717 tgttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 9178005 - 9178180
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||| || || ||||||||||||||||| ||||| |||||||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaa-tgatacttgaaggac 9178102  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||| |||||| |||| | ||  ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9178103 cgttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 19176451 - 19176289
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 19176353  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19176352 taaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19176289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 13225023 - 13225186
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 13225121  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13225122 taaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 13225186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 44831408 - 44831237
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataatggaaggaccgttttgttctgttt 44831310  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttat 201  Q
    |||||||| ||||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  44831309 taaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagccttaaaattat 44831237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 41681562 - 41681679
Alignment:
Q  73 ggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgagga 172  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  41681562 ggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgagga 41681660  T
Q  173 ccaaaaatgtaattaagcc 191  Q
    |||||| ||||||||||||    
T  41681661 ccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca-------ataattgaaggac 4630253  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||| | |||| ||||||||  | ||||| | |||||||||||| ||||||||||| || ||||| |||||||||    
T  4630254 cgttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 11656841 - 11657004
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||  |||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccattttgttctgttt 11656939  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||||   |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11656940 taaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 11657004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 12572235 - 12572406
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||  |||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctgttt 12572333  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttat 201  Q
    |||||| | | |||||||||||||||||| |||||||||||||||||||| ||||||||| || |||| ||||    
T  12572334 taaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaaaccataaatttat 12572406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 9929070 - 9928912
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | ||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctgttt 9928972  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||| ||||| ||||||||||||||  ||||||||||||||||||| |||||||||    
T  9928971 taaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 33743290 - 33743406
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattgaaaaaccg 33743388  T
Q  116 ttttgttcttttttaaaa 133  Q
    ||||||||| ||||||||    
T  33743389 ttttgttctgttttaaaa 33743406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 31133605 - 31133764
Alignment:
Q  31 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttctttttt 129  Q
    |||||| ||||||||||| | ||| |||||  | ||||| || |||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaa-taataattgaaggaccgttttgttctgtttt 31133703  T
Q  130 aaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  31133704 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||| ||||||||| ||||| |||||  | |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| | |||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttatgttt 33328622  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    |||||| | | |||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  33328623 taaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 34540967 - 34541094
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||||| | ||||| ||||||||||||||||||||    
T  34540967 aaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaa 34541065  T
Q  164 acacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||||||| |||||||||||||    
T  34541066 acacgaggaccaaaagtgtaattaagcct 34541094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 33743082 - 33742921
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| ||||| ||| | || ||||| || |||||||||||||||||| |||||| ||||||||||| |||||||| ||||| |||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaa-tgataattgaaagaccgttt-gttctgttt 33742985  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| | ||| ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  33742984 taaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 33742921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 11336959 - 11337068
Alignment:
Q  82 aaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatg 181  Q
    ||||||||||||||| |||||||||||| ||||||||| |||| |||||||||||  |||| | ||||||||||| |||||||||||| |||||||| ||    
T  11336959 aaaaatgcaacaaaa-atgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtg 11337057  T
Q  182 taattaagcct 192  Q
    |||||||||||    
T  11337058 taattaagcct 11337068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 4629952 - 4629796
Alignment:
Q  36 ctgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaag 134  Q
    ||||||||||| | ||||| |||||  | ||||| || |||| |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaa-tgataattgaatgaccgttttgttctattttaaaag 4629854  T
Q  135 ggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    || ||||| |||||||||| || ||||||||||||| |  |||| || ||||||||||    
T  4629853 ggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagcct 4629796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 10918264 - 10918129
Alignment:
Q  52 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgt 151  Q
    ||||||||| ||||||||||||||| || ||||||||||||| ||||||||| |||||||||  ||||| ||| ||||||   || | ||| | ||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaaca-aaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgt 10918166  T
Q  152 gagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||  |||||||||||||| ||||||||||||||    
T  10918165 gagtagatcaaaacacgaggacaaaaaatgtaattaa 10918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 193
Target Start/End: Original strand, 8073957 - 8074098
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    |||||||||||  ||||||||||| |  |||| ||||||||||||||  ||||||||||||||   ||||||||| ||||||||||  | ||  | ||||    
T  8073957 cgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa--tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
    |||| |||||||||||||||||||||||| | ||| ||||||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaagcctt 8074098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 43958325 - 43958264
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaagga 112  Q
    ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  43958325 cgtttttggagaataaaatagagggtaggacgaaaaatgcaaca-aaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 10919691 - 10919748
Alignment:
Q  151 tgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttattacacaa 208  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||  |||||| ||||    
T  10919691 tgagtaggtcaaaacacgaggaccaaaagtataattaagccttaattttattaaacaa 10919748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 9177793 - 9177725
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaa 97  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||| |||||||||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaa 9177725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 9177700 - 9177666
Alignment:
Q  158 gccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||||||||||||| |||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagcct 9177666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 599577 - 599528
Alignment:
Q  146 tttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    |||||||||| || |||||  | |||||||||||||||||||||||||||    
T  599577 tttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccttaa 599528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 18805337 - 18805304
Alignment:
Q  15 gcatagggggtaggtctaaaactgtcatttctct 48  Q
    |||||||||||| |||||||||||||||||||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctct 18805304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 134042 - 134219
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||     
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgttaattgaaggat 134140  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  134141 cgttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 134219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 1841 - 1657
Alignment:
Q  16 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccg 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |     
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaaca-aaaatgataattgaaggaaca 1743  T
Q  116 ttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaaacttat 201  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||||    
T  1742 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcctataacttat 1657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 2051 - 2213
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||| |||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaatgaccgttttgttctgttt 2149  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  2150 taaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 4576 - 4753
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaaatgataattaaaggac 4674  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  4675 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagcct 4753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    ||||||||||||||||||| | ||||| |||  | ||||| || ||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttttgttt 4266  T
Q  129 taaaagggtaggactagtttcgtg 152  Q
    |||||||| ||||| |||||||||    
T  4265 taaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 134; Significance: 1e-69; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 64478 - 64298
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaaca-aaaatgataattgaaggac 64380  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
    ||||||||||| ||||||||||  ||||  ||||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  64379 cgttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccttaa 64298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 64735 - 64852
Alignment:
Q  75 taggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggacc 174  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||  |||| ||||||||||||| |||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaa-atgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacc 64833  T
Q  175 aaaaatgtaattaagcctt 193  Q
    |||| ||||||||| ||||    
T  64834 aaaagtgtaattaaacctt 64852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 205738 - 205917
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||   ||||| ||  ||||||| |||| ||||  |||| |||||| || | ||||    
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgca--aaaacatgatagtttagggac 205835  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccttaa 195  Q
     |||||||||  ||| |||  || ||||| | |||||||||| || |||||   |||||| |||| |||||||||| |||||    
T  205836 ggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaagacttaa 205917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa--tgataattgaaggac 831  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 189  Q
    ||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||| |||||||| ||||||||||    
T  830 cgttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 1116 - 1286
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    ||||| |||||||||||| ||||| ||| ||||| ||| |  | ||||| || |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaa-atgataattgaaggaccgtttt 1214  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  1215 gttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    |||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaa-atgataattgaaggac 10339  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||||||||| |  || |||||||||||||| |||||||||||||||||||| |||||||||    
T  10340 cgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 10029 - 9935
Alignment:
Q  94 aaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||| |||||||||||||||| ||||||||| | ||||||||| | ||  |||||||||| ||||| ||||||||||||||||||||||||||||    
T  10029 aaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 42528 - 42704
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgaaacaaaa-atgataactgaaggac 42625  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    ||||||||||| ||||||||||| || |  |||||| ||||||| ||||||||||||| |||||| | |||||||||||    
T  42626 cgttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcct 42704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 42339 - 42166
Alignment:
Q  21 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgtttt 119  Q
    |||||||||||||||||||||||||||| ||||| || ||  | ||||| || |||| ||| |||||||||||||||| ||||||||||| |||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaa-tgataattgaatgaccgtttt 42241  T
Q  120 gttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctta 194  Q
    ||||| |||||||| || ||||  |||||||||| ||| |||||||||||| || |||| ||||||||| |||||    
T  42240 gttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaaacctta 42166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 10797 - 10640
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaac-gaaaatgatacttgaaggac 10699  T
Q  114 cgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgagga 172  Q
    ||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  10698 cgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 11042 - 11168
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||    
T  11042 aaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaa 11140  T
Q  164 acacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||||||| ||||||||||||    
T  11141 acacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 19001 - 18833
Alignment:
Q  23 ggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgtt 122  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaa-tgataattgaagcaccgttttgtt 18904  T
Q  123 cttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctt 193  Q
     | ||||||||||| | ||| |||||||||||||||||||||||  |||||||||| |||||| |||||||    
T  18903 atgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcctt 18833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 19067 - 19166
Alignment:
Q  92 caaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 191  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19067 caaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  14 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggac 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaaca-aaaatgatacttgaaggac 16574  T
Q  114 cgttttgttc 123  Q
    ||||||||||    
T  16573 cgttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  30 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttt 128  Q
    |||||||||| |||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||  ||||||||| |||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggacaattttgttctgttt 16978  T
Q  129 taaaagggtaggactagtttcgtgagtaggccaaaacacgaggacc 174  Q
    ||||| ||  |||  ||||||||||||| | |||||||||||||||    
T  16979 taaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 28662 - 28790
Alignment:
Q  64 aaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaa 163  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||||| ||||||||||| | ||| |||||||| |||||||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaa-atgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaa 28760  T
Q  164 acacgaggaccaaaaatgtaattaagcctt 193  Q
    |||||| |||||||| |||||||| |||||    
T  28761 acacgatgaccaaaagtgtaattatgcctt 28790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 707 - 568
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| || ||||||| |||  |||||||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||| | ||  | ||||    
T  707 cgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaa-tgataattgaaggacagttttgttctgttttaaaagggcatgatcattttc 609  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 190  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  608 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 61863 - 62000
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||||||| | ||||||||||||||||||||||||  |||||||| ||||| ||||| ||   ||||||||| ||||||||||||||||| | ||||    
T  61863 cgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaa-tgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    |||||||| |||||||||||||| ||||| |||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 61102 - 61027
Alignment:
Q  117 tttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 192  Q
    |||||||| |||||||| || ||||  | ||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagcct 61027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 8457 - 8551
Alignment:
Q  94 aaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 188  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||| |||||||| ||||| |||||||| || |||||||| |||||||||    
T  8457 aaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 7693 - 7784
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggac 142  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| |||| ||| |||||||||| ||||||||||| |||||    
T  7693 cgtttttggaggataaaatagggggtaggacgaaaaatgcaac-aaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 588 - 454
Alignment:
Q  50 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaaatgataattgaaggaccgttttgttcttttttaaaagggtaggactagtttc 149  Q
    ||||||| ||| |||||||||| | ||||||||||||||||||||||| |||||||||||||||  || |||| | |||||||||   | ||| | ||||    
T  588 cgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaa-tgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  150 gtgagtaggccaaaacacgaggaccaaaaatgtaatta 187  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  490 gtgagtaggccaaaacacgaagacc-aaaatgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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