View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1508_high_20 (Length: 305)

Name: NF1508_high_20
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1508_high_20
NF1508_high_20
[»] chr5 (32 HSPs)
chr5 (5-289)||(2186607-2186885)
chr5 (5-122)||(42196186-42196304)
chr5 (25-120)||(19752911-19753006)
chr5 (44-119)||(20214196-20214271)
chr5 (5-116)||(42195137-42195247)
chr5 (5-121)||(25523067-25523184)
chr5 (27-116)||(28539828-28539917)
chr5 (28-120)||(21835040-21835132)
chr5 (28-119)||(21834928-21835019)
chr5 (25-121)||(28538674-28538771)
chr5 (24-98)||(7311612-7311686)
chr5 (44-123)||(25524152-25524233)
chr5 (27-120)||(36486496-36486590)
chr5 (5-121)||(16650841-16650958)
chr5 (5-121)||(18486888-18487005)
chr5 (25-122)||(19754136-19754235)
chr5 (5-116)||(24332916-24333028)
chr5 (25-119)||(22940629-22940723)
chr5 (25-127)||(33160292-33160395)
chr5 (44-98)||(1016888-1016942)
chr5 (5-119)||(5962558-5962671)
chr5 (25-121)||(20216769-20216866)
chr5 (5-66)||(25055466-25055527)
chr5 (45-121)||(5730439-5730517)
chr5 (25-119)||(25056387-25056482)
chr5 (27-65)||(38834141-38834179)
chr5 (25-121)||(5778842-5778939)
chr5 (44-120)||(33158097-33158174)
chr5 (44-119)||(1796054-1796130)
chr5 (25-121)||(5777899-5777994)
chr5 (14-78)||(25524093-25524157)
chr5 (46-98)||(34893687-34893739)
[»] chr4 (36 HSPs)
chr4 (25-121)||(1963194-1963291)
chr4 (5-121)||(1290184-1290301)
chr4 (5-119)||(10447006-10447122)
chr4 (25-117)||(19750581-19750673)
chr4 (25-117)||(19789133-19789225)
chr4 (44-124)||(49308052-49308132)
chr4 (25-121)||(26421628-26421724)
chr4 (5-121)||(10448246-10448363)
chr4 (44-121)||(37728590-37728667)
chr4 (5-121)||(13509345-13509461)
chr4 (25-120)||(31599788-31599884)
chr4 (21-123)||(50909269-50909371)
chr4 (25-122)||(17388217-17388314)
chr4 (17-121)||(21177995-21178099)
chr4 (5-121)||(49306773-49306888)
chr4 (5-119)||(50909658-50909774)
chr4 (14-116)||(8155741-8155843)
chr4 (25-127)||(8757667-8757769)
chr4 (44-122)||(17382990-17383068)
chr4 (5-121)||(1835088-1835205)
chr4 (25-121)||(25685828-25685925)
chr4 (5-119)||(1834119-1834235)
chr4 (32-119)||(1964454-1964542)
chr4 (25-121)||(5526132-5526228)
chr4 (25-124)||(10471394-10471494)
chr4 (26-116)||(8758844-8758935)
chr4 (14-116)||(12129626-12129729)
chr4 (25-119)||(25684934-25685029)
chr4 (25-122)||(52491613-52491711)
chr4 (71-116)||(35934347-35934391)
chr4 (27-88)||(37727729-37727789)
chr4 (27-92)||(46638733-46638798)
chr4 (44-127)||(3928883-3928967)
chr4 (25-120)||(10470545-10470641)
chr4 (25-116)||(35935539-35935631)
chr4 (36-116)||(55602379-55602459)
[»] chr1 (34 HSPs)
chr1 (5-121)||(51685751-51685868)
chr1 (25-124)||(35067008-35067108)
chr1 (5-119)||(51684366-51684481)
chr1 (25-116)||(24426081-24426173)
chr1 (44-120)||(45157234-45157310)
chr1 (14-119)||(46066525-46066628)
chr1 (25-120)||(52274967-52275063)
chr1 (14-120)||(11436041-11436148)
chr1 (5-124)||(50680327-50680446)
chr1 (16-121)||(23980463-23980569)
chr1 (25-119)||(39699773-39699867)
chr1 (25-121)||(24422798-24422895)
chr1 (25-121)||(52276169-52276266)
chr1 (26-116)||(30249497-30249588)
chr1 (14-120)||(36612852-36612958)
chr1 (25-119)||(36613910-36614005)
chr1 (5-92)||(40384753-40384840)
chr1 (44-122)||(14999282-14999360)
chr1 (44-106)||(39151945-39152007)
chr1 (5-121)||(11437185-11437302)
chr1 (5-121)||(45149956-45150073)
chr1 (28-116)||(45156052-45156141)
chr1 (5-116)||(39153102-39153214)
chr1 (25-121)||(43058784-43058880)
chr1 (25-120)||(33088623-33088719)
chr1 (14-119)||(39222468-39222575)
chr1 (25-120)||(52827346-52827442)
chr1 (28-119)||(2940266-2940357)
chr1 (44-123)||(7674524-7674602)
chr1 (14-120)||(44404441-44404548)
chr1 (5-119)||(45148581-45148695)
chr1 (28-121)||(11190383-11190477)
chr1 (25-119)||(41364829-41364923)
chr1 (25-121)||(52828076-52828173)
[»] chr8 (38 HSPs)
chr8 (5-119)||(30336487-30336602)
chr8 (28-121)||(8389698-8389792)
chr8 (38-121)||(17844276-17844357)
chr8 (5-121)||(24122881-24122997)
chr8 (5-114)||(1824064-1824174)
chr8 (5-114)||(1858509-1858619)
chr8 (5-122)||(10007749-10007867)
chr8 (5-122)||(5513979-5514096)
chr8 (5-121)||(30568885-30569001)
chr8 (25-120)||(8388463-8388557)
chr8 (25-116)||(29968343-29968434)
chr8 (5-124)||(10006339-10006459)
chr8 (25-120)||(12353367-12353461)
chr8 (5-119)||(22220388-22220503)
chr8 (5-116)||(30570242-30570353)
chr8 (16-120)||(1823551-1823656)
chr8 (16-120)||(1857996-1858101)
chr8 (5-120)||(30335638-30335754)
chr8 (26-121)||(2379931-2380023)
chr8 (14-121)||(5514266-5514372)
chr8 (25-119)||(11283215-11283310)
chr8 (5-120)||(32207311-32207425)
chr8 (14-120)||(24359808-24359913)
chr8 (70-119)||(36249552-36249602)
chr8 (25-110)||(18978029-18978114)
chr8 (5-121)||(24123884-24123998)
chr8 (25-120)||(12351920-12352016)
chr8 (25-120)||(22221370-22221466)
chr8 (25-120)||(22227712-22227808)
chr8 (44-121)||(42982682-42982760)
chr8 (29-120)||(43661833-43661925)
chr8 (14-65)||(43661320-43661371)
chr8 (21-67)||(24361195-24361241)
chr8 (25-115)||(45112875-45112964)
chr8 (70-119)||(3819489-3819538)
chr8 (44-120)||(45114541-45114618)
chr8 (70-121)||(11456636-11456688)
chr8 (25-124)||(18979126-18979226)
[»] scaffold0586 (2 HSPs)
scaffold0586 (25-123)||(9033-9130)
scaffold0586 (5-121)||(6341-6458)
[»] chr6 (14 HSPs)
chr6 (5-121)||(6842269-6842386)
chr6 (25-120)||(3333032-3333128)
chr6 (25-116)||(5658759-5658851)
chr6 (26-123)||(27437824-27437922)
chr6 (25-121)||(8659263-8659360)
chr6 (25-121)||(16704503-16704600)
chr6 (25-122)||(27322074-27322171)
chr6 (5-124)||(7316280-7316400)
chr6 (26-121)||(8821871-8821967)
chr6 (14-116)||(1829598-1829701)
chr6 (70-124)||(27447964-27448019)
chr6 (45-121)||(3722533-3722610)
chr6 (25-66)||(12350851-12350892)
chr6 (27-124)||(14823583-14823682)
[»] scaffold0369 (1 HSPs)
scaffold0369 (28-120)||(13192-13283)
[»] chr2 (26 HSPs)
chr2 (25-124)||(38840499-38840599)
chr2 (25-120)||(11258817-11258913)
chr2 (14-118)||(13030293-13030395)
chr2 (25-121)||(7899888-7899985)
chr2 (44-120)||(802616-802692)
chr2 (14-78)||(18869157-18869222)
chr2 (26-121)||(18905995-18906090)
chr2 (5-120)||(22587940-22588055)
chr2 (5-121)||(23869521-23869637)
chr2 (5-119)||(18299373-18299488)
chr2 (44-122)||(36449775-36449854)
chr2 (25-121)||(18904365-18904462)
chr2 (25-124)||(7898686-7898786)
chr2 (25-120)||(22848190-22848286)
chr2 (44-121)||(18868922-18869000)
chr2 (5-98)||(22587523-22587615)
chr2 (25-121)||(38839240-38839337)
chr2 (26-121)||(41879219-41879315)
chr2 (5-125)||(18797240-18797362)
chr2 (28-66)||(11996761-11996799)
chr2 (17-121)||(11938787-11938891)
chr2 (5-118)||(18300711-18300822)
chr2 (44-96)||(810806-810858)
chr2 (24-119)||(1034474-1034570)
chr2 (80-116)||(13830270-13830306)
chr2 (45-121)||(36450947-36451023)
[»] chr3 (42 HSPs)
chr3 (16-122)||(22776809-22776916)
chr3 (25-119)||(51037536-51037630)
chr3 (16-120)||(46721217-46721322)
chr3 (14-121)||(534497-534605)
chr3 (44-123)||(19984845-19984925)
chr3 (25-120)||(12703506-12703601)
chr3 (27-124)||(7268835-7268932)
chr3 (25-121)||(7267642-7267738)
chr3 (5-121)||(12700173-12700288)
chr3 (16-119)||(46719941-46720045)
chr3 (26-119)||(49216247-49216341)
chr3 (16-121)||(8875904-8876010)
chr3 (25-118)||(8456479-8456572)
chr3 (28-116)||(52104484-52104569)
chr3 (25-120)||(54540796-54540892)
chr3 (28-122)||(29931223-29931318)
chr3 (28-122)||(29980377-29980472)
chr3 (28-121)||(7758400-7758494)
chr3 (25-121)||(5029689-5029785)
chr3 (14-121)||(19986065-19986175)
chr3 (14-65)||(23770402-23770453)
chr3 (26-120)||(24516459-24516554)
chr3 (32-122)||(51038803-51038894)
chr3 (25-119)||(51469972-51470067)
chr3 (27-120)||(29932707-29932800)
chr3 (27-120)||(29981861-29981954)
chr3 (14-119)||(47614185-47614291)
chr3 (26-116)||(49398130-49398220)
chr3 (25-122)||(28262190-28262287)
chr3 (34-119)||(53901403-53901487)
chr3 (44-120)||(55192020-55192096)
chr3 (42-89)||(54654329-54654376)
chr3 (70-112)||(22775783-22775825)
chr3 (25-122)||(47610586-47610684)
chr3 (26-116)||(54987014-54987103)
chr3 (25-121)||(47609695-47609792)
chr3 (70-115)||(51348321-51348366)
chr3 (73-121)||(11671395-11671443)
chr3 (5-121)||(34019131-34019246)
chr3 (70-121)||(47615599-47615651)
chr3 (28-123)||(51347264-51347360)
chr3 (25-120)||(52839036-52839132)
[»] chr7 (25 HSPs)
chr7 (5-126)||(21505409-21505529)
chr7 (5-123)||(22629479-22629601)
chr7 (25-121)||(22630458-22630555)
chr7 (25-121)||(30439364-30439460)
chr7 (14-121)||(42886281-42886389)
chr7 (5-119)||(18371424-18371539)
chr7 (5-126)||(7500448-7500569)
chr7 (25-106)||(18372463-18372544)
chr7 (25-121)||(127335-127430)
chr7 (28-123)||(46482593-46482689)
chr7 (25-119)||(31659622-31659718)
chr7 (28-120)||(31661018-31661111)
chr7 (5-125)||(14999141-14999259)
chr7 (25-119)||(48934909-48935004)
chr7 (25-122)||(11658376-11658474)
chr7 (25-122)||(17782559-17782657)
chr7 (25-121)||(3227600-3227697)
chr7 (5-121)||(7501838-7501955)
chr7 (48-120)||(20163585-20163658)
chr7 (25-121)||(31949320-31949417)
chr7 (25-116)||(11662557-11662649)
chr7 (25-118)||(3227109-3227202)
chr7 (25-117)||(17781663-17781756)
chr7 (70-121)||(24597515-24597567)
chr7 (14-98)||(47369803-47369887)
[»] scaffold2034 (1 HSPs)
scaffold2034 (16-119)||(233-337)
[»] scaffold0632 (1 HSPs)
scaffold0632 (25-121)||(3314-3410)
[»] scaffold0049 (2 HSPs)
scaffold0049 (25-119)||(7538-7632)
scaffold0049 (25-120)||(7421-7517)
[»] scaffold0019 (2 HSPs)
scaffold0019 (5-118)||(61445-61559)
scaffold0019 (14-119)||(60090-60196)
[»] scaffold0320 (1 HSPs)
scaffold0320 (14-121)||(19486-19594)
[»] scaffold1303 (1 HSPs)
scaffold1303 (5-123)||(1435-1554)
[»] scaffold0186 (1 HSPs)
scaffold0186 (25-119)||(23081-23174)
[»] scaffold0003 (2 HSPs)
scaffold0003 (26-123)||(49440-49538)
scaffold0003 (70-124)||(39339-39394)
[»] scaffold0294 (2 HSPs)
scaffold0294 (25-121)||(5444-5541)
scaffold0294 (25-126)||(4435-4537)
[»] scaffold0302 (1 HSPs)
scaffold0302 (44-121)||(17468-17546)
[»] scaffold0045 (1 HSPs)
scaffold0045 (28-66)||(48361-48399)
[»] scaffold0059 (1 HSPs)
scaffold0059 (25-98)||(3697-3770)


Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 289
Target Start/End: Complemental strand, 2186885 - 2186607
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| || ||    
T  2186885 aaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaacttagggggaaa 2186786  T
Q  105 aagtgcactttagcctatttatatagacgtaaacaaaaatgatcccatcgagatgaccgagtataactaacttaactgttcaggaagaactcaattttat 204  Q
    || ||||||||| |||     ||||| |||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  2186785 aaatgcacttta-cct-----tataggcgtaaacaaaaatgatcccatcaagatcactcagtataactaacttaactgttcaggaagaactcaattttat 2186692  T
Q  205 atagacgtagacaatcaccaaactagcaaagtttattagttcctctagttcaaaatttaatgggtcaatcaatcctggaataagc 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2186691 atagacgtagacaatcaccaaactagcaaagtttattagttcctctagttcaaaatttaattggtcaatcaatcctggaataagc 2186607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 42196186 - 42196304
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtggga 103  Q
    ||||| || |||||||||  ||||||||||||||||||||||| |||||||||||||||||||  |||||| | |||||||||| ||| ||| || |||     
T  42196186 aaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttagggggggg 42196285  T
Q  104 aaagtgcactttagcctat 122  Q
    |||||||||||||||||||    
T  42196286 aaagtgcactttagcctat 42196304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 19753006 - 19752911
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    ||||||||| |||||| | ||||||||||||||||||| |||   ||||||||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  19753006 ggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcct 19752911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 20214271 - 20214196
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    |||||||||||||||||||||||| ||| |||||| ||| ||||||||| ||| | ||||||||||||||||||||    
T  20214271 aaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 42195247 - 42195137
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||||||||| |||||||||| ||||||||||||   ||||||||  ||||||||| ||| ||| | |||||    
T  42195247 aaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaacttttt-aaagttaagggggaa 42195149  T
Q  105 aagtgcacttta 116  Q
    ||||||||||||    
T  42195148 aagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 25523184 - 25523067
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  ||||||||||||||||   ||||||||||||||||||| |||   || |||||| ||| ||||||||| || ||| ||||    
T  25523184 aaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaagggggga 25523085  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  25523084 aaagtgcactttagccta 25523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 28539828 - 28539917
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    |||||||||||||||| ||||||||||||||||||| ||||  | ||||||| ||| ||||| ||| ||||| ||||||| |||||||||    
T  28539828 ctaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 21835132 - 21835040
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    |||||||||||||   |||||||||||||||||||||||   | |||||| |||||||||| ||||||||  ||| |||||||||||||||||    
T  21835132 taaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagagggggaaagtgcactttagcct 21835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 21834928 - 21835019
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    |||||| |||||  ||||||||||||||||||| ||||||| | |||| || ||||||||| |||||||   ||||||||||||||||||||    
T  21834928 taaatcgtagggagctaaaattgtagtttttgttcatagaaggtcaaatttgcaactttttcaaacttataggggaaaagtgcactttagcc 21835019  T

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Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 28538771 - 28538674
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||| ||||||||||||||||||||| ||    | ||||||| ||| ||||||||| ||| ||  |||||||||||||||||||||    
T  28538771 ggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagccta 28538674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 7311686 - 7311612
Alignment:
Q  24 tggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttagg 98  Q
    ||||||||||||||||| ||||||||||||||||||||| | | | ||||| ||| ||| ||||||||| |||||    
T  7311686 tggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttagg 7311612  T

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Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 25524152 - 25524233
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta--ggtgggaaaagtgcactttagcctatt 123  Q
    ||||||||||||||||||| |||   ||||||||||||| ||||| ||| |||  || ||||||||||||||||||||||||    
T  25524152 aaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcctatt 25524233  T

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Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 36486496 - 36486590
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcct 120  Q
    |||||||||||||||| ||||||||||||||||||| |||   | ||||||| ||| ||||| ||| ||||| ||| |||||||||||| |||||    
T  36486496 ctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 36486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 16650841 - 16650958
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  ||||||| |||||||| ||||||||||||||||| ||| |||   | ||||||| ||| ||||| ||| || |||  |||    
T  16650841 aaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtgga 16650940  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  16650941 aaagtgcactttagccta 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 18486888 - 18487005
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  |||||||||||||||| | |||||||| |||| | ||| |||   ||||||||| ||| ||||||||| || ||| |||     
T  18486888 aaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggg 18486987  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  18486988 aaagtgcactttagccta 18487005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 19754136 - 19754235
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg--aaaagtgcactttagcctat 122  Q
    ||||||||| |||||| | ||||||||||||||||||  |||   ||||||||| ||| ||||||||| ||||| |||  |||| |||||||||||||||    
T  19754136 ggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcctat 19754235  T

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Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 24333028 - 24332916
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  || |||||||||| ||   ||||||||||||||||||||||    ||||||||| ||| |||||||||||| ||| || |    
T  24333028 aaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaa 24332929  T
Q  104 aaagtgcacttta 116  Q
    |||||||||||||    
T  24332928 aaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 22940629 - 22940723
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcc 119  Q
    |||||||| ||||||| | ||||||||| ||||||||| |||   ||||||||| ||| ||||||||| ||| || ||||||||||||||||||||    
T  22940629 ggctaaattttaggggtc-aaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 33160292 - 33160395
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcctatt 123  Q
    |||||||||||| |||   ||||||||||||| | ||| |||   || |||||| ||| ||||||||| ||| || ||||||||||||||||||||||||    
T  33160292 ggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcctatt 33160391  T
Q  124 tata 127  Q
    ||||    
T  33160392 tata 33160395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 1016888 - 1016942
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttagg 98  Q
    |||||||||||||||||||||||||  |||||||||||| ||||| ||| |||||    
T  1016888 aaaattgtagtttttgtacatagaagaccaaaattacaattttttaaaaattagg 1016942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 5962558 - 5962671
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || ||||| ||| | ||||||| ||||| | |||||||| |||||||||||| |||    |||||||||||| ||||||||| | | |||| ||    
T  5962558 aaggaccaaagatgtaaattagctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttgaaagtca-gtggaaa 5962656  T
Q  105 aagtgcactttagcc 119  Q
    |||||||||||||||    
T  5962657 aagtgcactttagcc 5962671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 20216769 - 20216866
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    |||||| |||| |||| | |||||||||||||||||| ||||   || |||||| ||| ||||||||| || ||| ||||||||||||||||| ||||    
T  20216769 ggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaaccta 20216866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 25055527 - 25055466
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatag 66  Q
    ||||| || |||||||||  |||||||||||||||| | ||||||||||||||| |||||||    
T  25055527 aaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatag 25055466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 5730517 - 5730439
Alignment:
Q  45 aaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta--ggtgggaaaagtgcactttagccta 121  Q
    ||||||| ||||| |||| ||| | ||||||||| ||| ||||||||| |||  || ||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagccta 5730439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 25056387 - 25056482
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcc 119  Q
    ||||||||||||||||   ||||||||||||||  ||| |||   | ||||||| ||| ||||||||| ||||| | |||||||||||||||||||    
T  25056387 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 38834179 - 38834141
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacata 65  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  38834179 ctaaatcttagggagctaaaattgtagtttttgtacata 38834141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 5778842 - 5778939
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   || |||||| ||| ||||||||| |||| | ||||||||||||||||||||||    
T  5778842 ggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 5778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 33158174 - 33158097
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactttagcct 120  Q
    ||||||||||||||||||| |||  || ||||||| ||| ||||||||| ||||| ||  |||| |||||||||||||    
T  33158174 aaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 1796130 - 1796054
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcc 119  Q
    ||||||||||||||||||| |||   |||||| || ||| ||||||||| ||||| | |||||| ||||||||||||    
T  1796130 aaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 5777994 - 5777899
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   | ||||||| ||| ||||||||| ||||| |||||| |||||||||||||||    
T  5777994 ggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaa-gtgcactttagccta 5777899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 25524093 - 25524157
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaatt 78  Q
    |||||||||  ||||||||||||||||   |||||| |||||||||||| ||| | |||||||||    
T  25524093 agatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaatt 25524157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 34893739 - 34893687
Alignment:
Q  46 aattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttagg 98  Q
    |||||||||||||||||||||   ||||||||| ||| ||||||||| |||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttagg 34893687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 1963291 - 1963194
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    |||||| ||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||| || ||| ||||||||||||||||||||||    
T  1963291 ggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagccta 1963194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 1290184 - 1290301
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  || ||||||||||||| ||||||||||||||||||||| ||||  ||||||||| |||  |||||||| || ||| ||||    
T  1290184 aaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaagggggga 1290283  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  1290284 aaagtgcactttagccta 1290301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 10447122 - 10447006
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta--ggtggg 102  Q
    ||||| || |||||||||  ||||||||||||||||  ||||||||| ||||||||||||||   || |||||| |||||||||||||||||   | |||    
T  10447122 aaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagaggggg 10447023  T
Q  103 aaaagtgcactttagcc 119  Q
    |||||||||||||||||    
T  10447022 aaaagtgcactttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 19750581 - 19750673
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttag 117  Q
    ||||||||||||||||  |||||||||||||||||||| |||   ||||||||| ||| ||||| ||| ||||| ||||||||||||||||||    
T  19750581 ggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 19789225 - 19789133
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttag 117  Q
    ||||||||||||||||  |||||||||||||||||||| |||   ||||||||| ||| ||||| ||| ||||| ||||||||||||||||||    
T  19789225 ggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 49308052 - 49308132
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctattt 124  Q
    ||||||||||||||||||| |||   ||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||    
T  49308052 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcctattt 49308132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 26421628 - 26421724
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    |||||||||||| |||   ||||||||||||||||||| ||| | | ||||||| ||| ||||||||| ||||  ||||||||||||||||||||||    
T  26421628 ggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagccta 26421724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 10448246 - 10448363
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-gga 103  Q
    ||||| || |||||||||  ||||| ||||||| || | |||||||||||||||||||||||   || |||||  ||||||||||||||||||| | ||     
T  10448246 aaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggg 10448345  T
Q  104 aaagtgcactttagccta 121  Q
     |||||||||||||||||    
T  10448346 gaagtgcactttagccta 10448363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 37728590 - 37728667
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||| ||| ||||| || |||| ||||||||| ||||    
T  37728590 aaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagttaggaggaaaaaatgcactttaaccta 37728667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 13509345 - 13509461
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    |||||||| || ||||||  |||||||||||||||||  ||||||||||||||  ||| | |   ||||||||| ||| ||||| ||| ||||| |||||    
T  13509345 aaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagttaggggggaa 13509444  T
Q  105 aagtgcactttagccta 121  Q
    |||| ||||||||||||    
T  13509445 aagtacactttagccta 13509461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 31599884 - 31599788
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcct 120  Q
    |||||||||||||||||| ||||||||||||||||||| |||   | ||||||| ||| ||||| ||| ||||| ||| |||||||||||| |||||    
T  31599884 ggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 31599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 50909371 - 50909269
Alignment:
Q  21 aaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    ||||| |||||||||||| |  |||||||||||||||| || |||| | | ||||||| ||||||||| ||||||||| |  |||| | |||||||||||    
T  50909371 aaatgactaaatcttaggaggttaaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttaggggaaaaaaatacactttagcct 50909272  T
Q  121 att 123  Q
    |||    
T  50909271 att 50909269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 17388217 - 17388314
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctat 122  Q
    |||||| |||| |||| | ||||||||||||| ||||| ||     |||||||| ||| ||||||||| ||||| |||||||||||||||||||||||    
T  17388217 ggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcctat 17388314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 21178099 - 21177995
Alignment:
Q  17 tgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    ||||||| |||||||| |||||||   ||||||||||||||||| |||||     ||||||| ||||||| ||||| ||||| ||| ||||| |||||||    
T  21178099 tgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagttagggggggaaagtacacttta 21178000  T
Q  117 gccta 121  Q
    |||||    
T  21177999 gccta 21177995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 49306888 - 49306773
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||||| ||||||| ||  || | ||||||||||||||||||| || |  ||||||||| ||| ||||||||| || || |  ||    
T  49306888 aaggaccaaagatgcaaaatgactaaatcatattgggc-aaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagttgggggaaaa 49306790  T
Q  105 aagtgcactttagccta 121  Q
    |||||||||||||||||    
T  49306789 aagtgcactttagccta 49306773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 50909658 - 50909774
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggact-aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtggg 102  Q
    ||||| || |||||||||  |||||||||||| |||  | ||||||||||||||| |||||||   | ||||||  ||||||||| ||||||| |||||     
T  50909658 aaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaacttagggtgga 50909757  T
Q  103 aaaagtgcactttagcc 119  Q
    |||||||||||||||||    
T  50909758 aaaagtgcactttagcc 50909774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 8155843 - 8155741
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacata-gaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcac 112  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| || || |   || |||||| ||| ||||||||| ||||| |||||||||||||    
T  8155843 agatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagttagg-gggaaaagtgcac 8155745  T
Q  113 ttta 116  Q
    ||||    
T  8155744 ttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 8757769 - 8757667
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctattt 124  Q
    |||||||||||| ||| | ||||||||||||| ||||| |||   || ||||||  || ||||||||| ||| | || ||||||||||||||||||| ||    
T  8757769 ggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaaggggaaaaagtgcactttagcctaatt 8757670  T
Q  125 ata 127  Q
    |||    
T  8757669 ata 8757667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 17383068 - 17382990
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctat 122  Q
    ||||||||||||||||||| ||     |||||||| ||| ||||||||| ||||| | |||||||||||||||||||||    
T  17383068 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttagcctat 17382990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 1835088 - 1835205
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtggga 103  Q
    ||||| || |||||||||  ||||||||||||||||   ||||||||||||||  ||| |||   | ||||||| ||| ||||||||| ||| ||  |||    
T  1835088 aaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatgga 1835187  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  1835188 aaagtgcactttagccta 1835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 25685828 - 25685925
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| |||| | ||||||||||||||||||||||    
T  25685828 ggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 25685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 1834235 - 1834119
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttagggga-ctaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggg 102  Q
    ||||| || |||||||||  ||||||||||||||||  | ||||||||||||||| |||||||   | |||||||  || ||||| ||| |||| | |||    
T  1834235 aaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagaggggg 1834136  T
Q  103 aaaagtgcactttagcc 119  Q
    |||||||||||||||||    
T  1834135 aaaagtgcactttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 1964454 - 1964542
Alignment:
Q  32 tcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcc 119  Q
    ||||| ||||| ||||||||||||||||| |||||   |||||||||  |||||||| ||| || |||  |||||||||||||||||||    
T  1964454 tcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 5526132 - 5526228
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| |||||  ||| |||   ||||||||| ||| ||||||||| ||||  ||||||||||||||||||||||    
T  5526132 ggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagccta 5526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 10471394 - 10471494
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcctatt 123  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| ||| || |||||||||||||||||||| |||    
T  10471394 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccaatt 10471493  T
Q  124 t 124  Q
    |    
T  10471494 t 10471494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 8758844 - 8758935
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcacttta 116  Q
    ||||||||||| ||| | ||||||||||||| ||||| |||   ||||||||| ||| ||||||||| || ||| |||||||||||| ||||    
T  8758844 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 12129729 - 12129626
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcac 112  Q
    |||||||||  |||||||||||| |||   ||||||||||||||||||| ||    ||||||||| ||| ||||||||| || ||  |||||||||||||    
T  12129729 agatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcac 12129630  T
Q  113 ttta 116  Q
    ||||    
T  12129629 ttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 25685029 - 25684934
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcc 119  Q
    ||||||||||||||||    ||||||| ||||| |||| ||||  | ||||||| ||| ||||||||| ||||| ||| |||||||||||||||||    
T  25685029 ggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 52491613 - 52491711
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctat 122  Q
    |||||||| ||||||| | ||||||||||||| ||||  ||||   |||||||| ||| ||||||||| || |||  |||||||| |||||||||||||    
T  52491613 ggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcctat 52491711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 35934391 - 35934347
Alignment:
Q  71 ccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||    
T  35934391 ccaaaattacaagtttttgaaagttagg-gggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 37727789 - 37727729
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaacttttt 88  Q
    |||||||||| |||  ||||||||||||||||||| ||| |  |||||||||||||||||||    
T  37727789 ctaaatcttaaggggttaaaattgtagtttttgtatata-agagccaaaattacaacttttt 37727729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 46638733 - 46638798
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaa 92  Q
    |||||||||||||| ||||||||||| ||||||| |||||     ||||||| |||||||||||||    
T  46638733 ctaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttgaaa 46638798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 3928883 - 3928967
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcctatttata 127  Q
    |||||||| |||||  |||||||   ||||||||  |||| |||||||| ||||| ||| |||||||||||||||||| ||||||    
T  3928883 aaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctttttata 3928967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 10470641 - 10470545
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcct 120  Q
    ||||||||||||||||    |||||||  |||| |||| ||||  | ||||||| ||| ||||||||| ||| || |||||||||||||||||||||    
T  10470641 ggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 10470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 35935539 - 35935631
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcacttta 116  Q
    |||||||||||||||| | ||||||||||||| ||||| |||   || |||||| ||| ||||| ||| || ||| ||| |||||||||||||    
T  35935539 ggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 55602459 - 55602379
Alignment:
Q  36 aggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    ||||||||||||||||||||||| || |||||   | |||||| ||| ||||||||| |||   ||||||| |||||||||    
T  55602459 aggggactaaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaaaggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 51685751 - 51685868
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || |||||||||  ||||||||||||||||   ||||||||||||||||||||||||  ||||||||  ||||||||||||| |||| | ||||    
T  51685751 aaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagaggggga 51685850  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  51685851 aaagtgcactttagccta 51685868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 35067008 - 35067108
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctatt 123  Q
    |||||||| ||||||| | ||||||||||||||||| |||||   ||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||    
T  35067008 ggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcctatt 35067107  T
Q  124 t 124  Q
    |    
T  35067108 t 35067108  T

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Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 51684481 - 51684366
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  |||||||||||||||| | ||||||||||||||| |||||||   ||||||||| ||||||||| ||| || ||| ||||    
T  51684481 aaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaagggggga 51684382  T
Q  104 aaagtgcactttagcc 119  Q
    ||||||||||||||||    
T  51684381 aaagtgcactttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 24426081 - 24426173
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcacttta 116  Q
    |||||||||||||||||||||||||||||||||||||| |||   ||||||||| ||| ||||||||| |||| | ||| |||||||||||||    
T  24426081 ggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 45157234 - 45157310
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    |||||||||||||||||||||||   ||||||||| ||| ||||||||||||||| ||| |||||||||||||||||    
T  45157234 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaagtgcactttagcct 45157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 46066628 - 46066525
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcact 113  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    || |||||  ||||||||||||| |||||  |||||||||||||    
T  46066628 agatgcaaattggctaaatcttagggg-ctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagttagg-aggaaaagtgcact 46066531  T
Q  114 ttagcc 119  Q
    | ||||    
T  46066530 taagcc 46066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 52275063 - 52274967
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcct 120  Q
    |||||||||||||||| | ||||||||||||||||||| |||   | ||||||| ||| ||||||||| ||||| ||| ||||||||||||||||||    
T  52275063 ggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 52274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 11436148 - 11436041
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcac 112  Q
    |||||||||  || ||||||||||||| | ||||||||||||||| ||| || || ||||||||| ||| ||||||||| || | | |||||||||||||    
T  11436148 agatgcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcac 11436049  T
Q  113 tttagcct 120  Q
    ||||||||    
T  11436048 tttagcct 11436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 50680446 - 50680327
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  || |||||||||||||||||||||| |||||||| ||| |||   ||||||||| ||| |||||| || ||| | |||||    
T  50680446 aaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaagggggaa 50680347  T
Q  105 aagtgcactttagcctattt 124  Q
    || ||||||||| |||||||    
T  50680346 aaatgcactttaacctattt 50680327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 23980463 - 23980569
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactt 114  Q
    |||||||  |||||||||||||| ||| |||||| |||||||||||| |||   ||||||||| ||| ||||| ||| |||| | |||||||||||||||    
T  23980463 atgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactt 23980562  T
Q  115 tagccta 121  Q
    |||||||    
T  23980563 tagccta 23980569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 39699773 - 39699867
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    |||||||||||||||| | ||||||||||||| ||||| |||   | ||||||| ||| || |||||| ||||| ||||||||||||||||||||    
T  39699773 ggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagttaggggggaaaagtgcactttagcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 24422895 - 24422798
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||| | ||||||||||||||||||| |||   | ||||||| ||| ||||||||| || ||| || |||||||||||||||||||    
T  24422895 ggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagccta 24422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 52276169 - 52276266
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||||||||| || |||||||||||| |||   ||||||||||||| ||||||||| ||||   ||| ||||||||||||| ||||    
T  52276169 ggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcactttaaccta 52276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 30249497 - 30249588
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcacttta 116  Q
    ||||||||||| |||   |||||||||||||||||||||| ||   ||||||||||||||||||||| ||| || ||||| |||||||||||    
T  30249497 gctaaatcttaaggggtcaaaattgtagtttttgtacataaaagatcaaaattacaactttttgaaagttacggagggaagagtgcacttta 30249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 36612958 - 36612852
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcac 112  Q
    |||||||||  | ||||||||||||||  |||||||||||||||||||| ||  || |||||||| ||| ||||||||| || ||| ||||||| |||||    
T  36612958 agatgcaaagggactaaatcttagggggttaaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcac 36612860  T
Q  113 tttagcct 120  Q
    ||||||||    
T  36612859 tttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 36613910 - 36614005
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcc 119  Q
    ||||||||||||||||   ||||||||||||||||||| |||   ||||||||||||| ||||| ||| ||||| | |||||| ||||||||||||    
T  36613910 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 40384840 - 40384753
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaa 92  Q
    ||||| || |||||||||  |||||||| ||||||||  ||||||||||||||||||||||| |  | |||||| |||||||||||||    
T  40384840 aaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaa 40384753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 14999360 - 14999282
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctat 122  Q
    ||||||||||||||||||| |||   | ||||||| ||| ||||||||| ||||| ||||||||| |||||||||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaagtacactttagcctat 14999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 39152007 - 39151945
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaa 106  Q
    |||||||||||||||||||||||   ||||||||||||| ||||||||||||| | |||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaa 39151945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 11437185 - 11437302
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || ||||| |||| || ||||||||||||| | ||||||||||||||||||| ||     |||||||| ||| ||||||||| || ||| || |    
T  11437185 aaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaa 11437284  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  11437285 aaagtgcactttagccta 11437302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 45149956 - 45150073
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggact-aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggga 103  Q
    ||||| || |||||||||  ||||||||||||||||    |||||||| |||||||||| ||    ||||||||| ||| ||||||||| ||||| ||||    
T  45149956 aaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagttagggggga 45150055  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||| ||||    
T  45150056 aaagtgcactttaaccta 45150073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 45156141 - 45156052
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcacttta 116  Q
    |||||||||| ||  |||||||||||||||||||||||||| | |||||||  || |||||||||||| |||  ||||||||| ||||||    
T  45156141 taaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 39153102 - 39153214
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  || |||||||||| ||   ||||||||||||||||||||||    ||||||||| ||| |||||||||||| ||| || |    
T  39153102 aaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaa 39153201  T
Q  104 aaagtgcacttta 116  Q
    |||||||||||||    
T  39153202 aaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 43058880 - 43058784
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||| || ||||||||||||||||||||| |||   | ||||||| ||| ||||| ||| ||||| || ||||||| |||||| ||||    
T  43058880 ggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagttagggggaaaaagtgtactttaaccta 43058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 33088623 - 33088719
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    |||||||||||||||    ||||||||||||||||||| || |  | ||||||| ||| ||||||||  |||| | |||||||||||||||||||||    
T  33088623 ggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcct 33088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 39222468 - 39222575
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt--aggtgggaaaagtgca 111  Q
    |||||||||  ||| ||||||||| || |||| |||||||||||| ||| |||   ||||||||| ||| ||||||||| ||  ||| || |||||||||    
T  39222468 agatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgca 39222567  T
Q  112 ctttagcc 119  Q
    ||||||||    
T  39222568 ctttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 52827442 - 52827346
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcct 120  Q
    ||||||||||||||||  | ||||||| ||||| |||| |||   | ||||||| ||| ||||||||| ||| || |||||||||||||||||||||    
T  52827442 ggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcct 52827346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 2940357 - 2940266
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    ||||||||||||||  ||||||||  ||||||| ||||||  | |||||| ||||| |||| ||||||| | ||||||| | ||||||||||    
T  2940357 taaatcttaggggatcaaaattgttatttttgttcatagagggtcaaaatcacaacattttaaaacttaagggggaaaaatacactttagcc 2940266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 7674602 - 7674524
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctatt 123  Q
    ||||||||||||||||||| |||    |||||||| ||| ||||| ||| ||||| |||||||| |||||||||||||||    
T  7674602 aaaattgtagtttttgtacttagggc-ccaaaattgcaagtttttaaaagttaggggggaaaagggcactttagcctatt 7674524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 44404548 - 44404441
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcac 112  Q
    ||||||||| ||||||||| ||||||| | |||||| |||||||||||| |||   || |||||| | | ||||||||| ||| | ||| |||||||||     
T  44404548 agatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcat 44404449  T
Q  113 tttagcct 120  Q
    ||||||||    
T  44404448 tttagcct 44404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 45148695 - 45148581
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-a 103  Q
    ||||| || |||||||||  || |||||||||||||   ||||||||||||||| ||| |||   ||||||||| ||| ||||||||| ||| | ||| |    
T  45148695 aaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaa 45148597  T
Q  104 aaagtgcactttagcc 119  Q
    ||||||||||||||||    
T  45148596 aaagtgcactttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 11190477 - 11190383
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactttagccta 121  Q
    |||||||||| |||  ||||||| |||||||||| ||||    |||||||| ||||||||| ||| ||| | || ||||||||||||||||||||    
T  11190477 taaatcttagaggatcaaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagccta 11190383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 41364923 - 41364829
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    ||||||||||||||||    ||||||| ||||| |||  |||   ||||||||| ||| ||||||||| ||||| | ||||||||||||||||||    
T  41364923 ggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttagcc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 52828076 - 52828173
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| |||| | ||||||||||||||||| ||||    
T  52828076 ggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcactttaaccta 52828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 30336487 - 30336602
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||||||||||||||||| ||  |||||||||||||||||||| ||| | || ||||||| || ||||||||| ||||| |||||    
T  30336487 aaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaa 30336586  T
Q  105 -aagtgcactttagcc 119  Q
     |||||||||||||||    
T  30336587 gaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 8389698 - 8389792
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||| |||||||||||||||| ||  ||||||||||||||||| ||||    
T  8389698 taaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcactttaaccta 8389792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 17844357 - 17844276
Alignment:
Q  38 gggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    ||||| ||||||||||||||||||||||| |  ||||||| ||||||||||||||||| || ||| ||||||||||||||||||    
T  17844357 gggaccaaaattgtagtttttgtacatagga--ccaaaatcacaactttttgaaactttggaggggaaagtgcactttagccta 17844276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 24122997 - 24122881
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||   |||||||||||||||||||||||| |||||||||||| |||   | ||||||| ||| ||||| ||| ||||| |||||    
T  24122997 aaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagttaggggggaa 24122898  T
Q  105 aagtgcactttagccta 121  Q
    || ||||||||||||||    
T  24122897 aaatgcactttagccta 24122881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 1824064 - 1824174
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||| |||    |||||||| ||| ||||||||| |||| | ||||    
T  1824064 aaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagaggggga 1824163  T
Q  104 aaagtgcactt 114  Q
    ||| |||||||    
T  1824164 aaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 1858509 - 1858619
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||| |||    |||||||| ||| ||||||||| |||| | ||||    
T  1858509 aaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagaggggga 1858608  T
Q  104 aaagtgcactt 114  Q
    ||| |||||||    
T  1858609 aaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 10007749 - 10007867
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  |||||||||||||||||| |||||||| |||| | ||| |||   ||||||||| ||| ||||||||| || ||| ||||    
T  10007749 aaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggga 10007848  T
Q  104 aaagtgcactttagcctat 122  Q
    |||||||||||||||||||    
T  10007849 aaagtgcactttagcctat 10007867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 5514096 - 5513979
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||| |||||||   ||||||||||||||||||| |||   |||||||||  || ||||||||| ||||| || ||    
T  5514096 aaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagttagggggtaa 5513997  T
Q  105 aagtgcactttagcctat 122  Q
    ||||||||||||||||||    
T  5513996 aagtgcactttagcctat 5513979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 30569001 - 30568885
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||||||||  |||||| |||||||||||| ||  |   |||||||  |||||||||||||||||  ||| |    
T  30569001 aaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaacttagaggggga 30568902  T
Q  105 aagtgcactttagccta 121  Q
    |||||||||||||||||    
T  30568901 aagtgcactttagccta 30568885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 8388557 - 8388463
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    |||||||||||||||| | |||||| ||||||||||||||||   || |||||| ||||||||| ||| ||||| ||| |||||||||||||||||    
T  8388557 ggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagttagg-ggggaaagtgcactttagcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 29968343 - 29968434
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    |||||||||||||||||| | ||||||||||||||||| |||   ||||||||| ||| ||||| ||| ||| | |||||||||||||||||    
T  29968343 ggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 10006459 - 10006339
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || |||||||||  |||||||||||||||| | |||||||| |||||  ||| |||   ||||||||| ||| ||||||||| |||| | ||||    
T  10006459 aaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggga 10006360  T
Q  104 aaagtgcactttagcctattt 124  Q
    |||||||||||||||| ||||    
T  10006359 aaagtgcactttagccaattt 10006339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 12353367 - 12353461
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    |||||||||||||||| | |||||| ||||||| |||| |||   ||||||||| ||| ||||||||| ||| | |||||||||||||||||||||    
T  12353367 ggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcct 12353461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 22220503 - 22220388
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || |||||||||  |||||||||||||||| | ||||||||||||||| |||||||   | ||||||| ||| | ||| ||| |||| | ||||    
T  22220503 aaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagaggggga 22220404  T
Q  104 aaagtgcactttagcc 119  Q
    ||||||||||||||||    
T  22220403 aaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 30570242 - 30570353
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacat-agaatgccaaaattacaactttttgaaacttaggtggga 103  Q
    ||||| || |||||||||| |||||||||||||||| | |||||| || ||||||||||| || ||  ||||||| ||||||||| ||||||||  ||||    
T  30570242 aaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaatttttgtacataaggat--caaaattgcaactttttaaaacttagagggga 30570339  T
Q  104 aaa-gtgcacttta 116  Q
    ||| ||||||||||    
T  30570340 aaaggtgcacttta 30570353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 1823656 - 1823551
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactt 114  Q
    |||||||  ||||||||||||||||||  |||||||||||||||||| ||||  | ||||||| ||| ||||| ||| || ||| || |||||| |||||    
T  1823656 atgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactt 1823557  T
Q  115 tagcct 120  Q
    ||||||    
T  1823556 tagcct 1823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 1858101 - 1857996
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactt 114  Q
    |||||||  ||||||||||||||||||  |||||||||||||||||| ||||  | ||||||| ||| ||||| ||| || ||| || |||||| |||||    
T  1858101 atgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactt 1858002  T
Q  115 tagcct 120  Q
    ||||||    
T  1858001 tagcct 1857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 30335754 - 30335638
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||  ||||||||||||||||  |||||||||| ||||||||| |||   ||||||||| ||| ||||| ||| || |||  |||    
T  30335754 aaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtgga 30335655  T
Q  104 aaagtgcactttagcct 120  Q
    ||| |||||||||||||    
T  30335654 aaaatgcactttagcct 30335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 2379931 - 2380023
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    ||||||||||| ||| | |||||||||||||  ||||||||   ||||||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  2379931 gctaaatcttaaggggccaaaattgtagtttc-gtacataggg-gccaaaattacaactttttgaaagttagg-gggaaaagtaaactttagccta 2380023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 5514266 - 5514372
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcact 113  Q
    |||||||||  |||||||| |||| || | ||||||||||||||||||  ||||| || |||||| ||| ||||| ||| ||||| |  |||||||||||    
T  5514266 agatgcaaatgggctaaattttagaggtc-aaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattaggggataaaagtgcact 5514364  T
Q  114 ttagccta 121  Q
    ||||||||    
T  5514365 ttagccta 5514372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 11283215 - 11283310
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcc 119  Q
    |||||||| ||||||||| ||||||||  ||||| |||||||   || |||||||||||||||||||| || ||| ||| ||| ||||||||||||    
T  11283215 ggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 32207311 - 32207425
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||| | | | ||||||||||||||||||| |||   | ||||||| ||| ||||||||  ||||| ||| |    
T  32207311 aaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggttagg-gggga 32207409  T
Q  105 aagtgcactttagcct 120  Q
    ||||||||||||||||    
T  32207410 aagtgcactttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 24359913 - 24359808
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcact 113  Q
    |||||||||  ||||||||||||||||   |||||||||||||||||| |||| | || |||||  ||||||||| ||| ||||  || ||||| |||||    
T  24359913 agatgcaaataggctaaatcttagggggtcaaaattgtagtttttgtatatag-aggcaaaaatcgcaactttttaaaagttagagggaaaaagagcact 24359815  T
Q  114 ttagcct 120  Q
    |||||||    
T  24359814 ttagcct 24359808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 36249602 - 36249552
Alignment:
Q  70 gccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcc 119  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  36249602 gccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 18978114 - 18978029
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgc 110  Q
    |||||||||||| ||| | ||||||||||||||||||| |||   |||||||||  ||  |||||||| ||||| |||||||||||    
T  18978114 ggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 24123884 - 24123998
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||||| | ||||||||||| |||| |||| ||  | ||||||||| ||| ||||||||| ||| | |||      
T  24123884 aaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg-- 24123981  T
Q  105 aagtgcactttagccta 121  Q
    ||||| |||||||||||    
T  24123982 aagtgtactttagccta 24123998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 12352016 - 12351920
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcct 120  Q
    ||||||||||||||||   ||||||||||||||||||| |||   | ||||||| ||| ||||||||| || ||| ||| ||| |||||||||||||    
T  12352016 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcct 12351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 22221370 - 22221466
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcct 120  Q
    ||||||||||||||||   ||||||||||||||  ||| |||   | ||||||| ||| ||||||||| ||||| | ||||||||||||||||||||    
T  22221370 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 22227712 - 22227808
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcct 120  Q
    ||||||||||||||||   ||||||||||||||  ||| |||   | ||||||| ||| ||||||||| ||||| | ||||||||||||||||||||    
T  22227712 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 42982682 - 42982760
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt--aggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||||  | ||   ||||||||||||||||||| ||||||  |||| |||||||||||||||||||||    
T  42982682 aaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggt-ggaaaagtgcactttagccta 42982760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 43661833 - 43661925
Alignment:
Q  29 aaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcct 120  Q
    |||||||||||| | |||||| |||||||||||||||||     |||||| ||||||||||||| || |||  |||||||||||||| |||||    
T  43661833 aaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 43661371 - 43661320
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacata 65  Q
    |||||||||  |||||||||||||||| | |||||| |||||||||||||||    
T  43661371 agatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacata 43661320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 24361195 - 24361241
Alignment:
Q  21 aaatggctaaatcttaggggactaaaattgtagtttttgtacataga 67  Q
    ||||||||||||||||  ||| |||||||||| ||||||||||||||    
T  24361195 aaatggctaaatcttaaaggattaaaattgtaatttttgtacataga 24361241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 45112964 - 45112875
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttt 115  Q
    |||||| ||||||||||| |||||| || ||||||||| ||| |  | |||||||||| ||||||||| |||||  |||||| ||||||||    
T  45112964 ggctaattcttaggggaccaaaattataatttttgtacttag-agactaaaattacaaatttttgaaagttagggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 3819538 - 3819489
Alignment:
Q  70 gccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    ||||||||| |||| |||||||||||| | ||||||| ||||||||||||    
T  3819538 gccaaaattgcaacattttgaaacttaagggggaaaaatgcactttagcc 3819489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 45114541 - 45114618
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcct 120  Q
    ||||||||||||| |||||||||    |||||||| ||| ||||||||| ||||| | |||||||||||||| |||||    
T  45114541 aaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 11456688 - 11456636
Alignment:
Q  70 gccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactttagccta 121  Q
    ||||||||| ||| ||||||||| ||||| || ||||||||||||||||||||    
T  11456688 gccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagccta 11456636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 18979126 - 18979226
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcctatt 123  Q
    ||||||||| || ||| | ||||||||||||||| ||  |||   ||||||||| ||| || |||||| ||||| ||| |||||||||||||||| ||||    
T  18979126 ggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagcgtatt 18979225  T
Q  124 t 124  Q
    |    
T  18979226 t 18979226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 9033 - 9130
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctatt 123  Q
    |||||||||||||||| | ||||||||||||||||||||||| | || ||||| |||||||||||||| | ||| || |||||||||||||||||||||    
T  9033 ggctaaatcttaggggcc-aaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaattaaggaggaaaaagtgcactttagcctatt 9130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 6458 - 6341
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||| ||||||||||||||||   |||||||||||||||||||||||   || |||||   ||||||||||||||| |||  |||    
T  6458 aaggaccaaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcgga 6359  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||| ||||    
T  6358 aaagtgcactttaaccta 6341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 6842269 - 6842386
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || |||||||||  | |||||| ||| || ||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||| | ||||    
T  6842269 aaggatcaaagatgcaaacagactaaattttaaggaactaaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagaggggga 6842368  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  6842369 aaagtgcactttagccta 6842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 3333032 - 3333128
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    |||||||| |||| ||  ||||||||||||||||||||||||   ||||||||  ||||||||| ||||||||   |||||||||||| ||||||||    
T  3333032 ggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagcct 3333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 5658851 - 5658759
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcacttta 116  Q
    |||||||||||| ||||  |||||||||||||||||||||||    | ||||||| |||||||| |||||| ||| ||||||| |||||||||    
T  5658851 ggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 27437922 - 27437824
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactttagcctatt 123  Q
    |||||||||||||||   ||||||||||||||| |  ||||   ||||||||| ||||||||| ||| ||| | || ||||||||||||||||||||||    
T  27437922 gctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctatt 27437824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 8659360 - 8659263
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| |||| | ||||||||||||||||||||||    
T  8659360 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 8659263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 16704503 - 16704600
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||  |||  ||||||||||||||||||| |||   | ||||||| ||| ||||||||| || |||  |||||||||||||||||||||    
T  16704503 ggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagccta 16704600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 27322074 - 27322171
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctat 122  Q
    |||||| |||||||||   |||||||| ||||| |||| |||   ||||||||| |||  ||||||||  |||| |||||||||||||||||||||||    
T  27322074 ggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctat 27322171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 7316280 - 7316400
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtggga 103  Q
    ||||| || |||||||||  |||||||||||| ||| | |||||||| ||||   ||  |||   ||||||||| ||| ||||||||| ||| || ||||    
T  7316280 aaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaagggggga 7316379  T
Q  104 aaagtgcactttagcctattt 124  Q
    |||||||||||||||||||||    
T  7316380 aaagtgcactttagcctattt 7316400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 8821967 - 8821871
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| |||| | ||||||||||||||||||||||    
T  8821967 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 8821871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 1829598 - 1829701
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcac 112  Q
    |||||||||  |||||||||||||||| | ||||||||||||||| ||| |||   | ||||||| ||| ||||| ||| ||||| ||  ||||||||||    
T  1829598 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcac 1829697  T
Q  113 ttta 116  Q
    ||||    
T  1829698 ttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 27447964 - 27448019
Alignment:
Q  70 gccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcctattt 124  Q
    |||||||||  |||||||| ||||||| || |||||||||||||||||||||||||    
T  27447964 gccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctattt 27448019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 3722533 - 3722610
Alignment:
Q  45 aaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggt-gggaaaagtgcactttagccta 121  Q
    ||||||| ||||| |||| ||||  | ||||||| ||| ||||||||| |||||  ||||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagccta 3722610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 12350892 - 12350851
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatag 66  Q
    ||||||||||||||||  |||||||||||||||| |||||||    
T  12350892 ggctaaatcttagggggttaaaattgtagtttttatacatag 12350851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 14823583 - 14823682
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg--aaaagtgcactttagcctattt 124  Q
    |||||||||||||| | ||||||||||||| ||||| ||    || |||||| ||| ||||| ||| ||| | |||  ||||||||||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcctattt 14823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 13283 - 13192
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    ||||||||||||||| |||||||||||||| |||||||| | | |||||| |||||||||| ||| ||||| |||||||||||||||||||||    
T  13283 taaatcttaggggacaaaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagttagg-gggaaaagtgcactttagcct 13192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 38840499 - 38840599
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctatt 123  Q
    |||||||||||||||| ||||||||||||||||||||| |||   || |||||| ||| ||||||||| || ||| ||||||||||||||||||||||||    
T  38840499 ggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatt 38840598  T
Q  124 t 124  Q
    |    
T  38840599 t 38840599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 11258817 - 11258913
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    |||||||||||||||||||||||||||||||||||||| |||   ||||||||| ||| ||||||||| |||| | ||| ||| |||||||||||||    
T  11258817 ggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcactttagcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 13030395 - 13030293
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcact 113  Q
    ||||||||||  ||||||||||||||| | ||||||||| ||||||||| |||   ||||||||||||| ||||||||| ||||| ||||||||||||||    
T  13030395 agatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtacttag-gggccaaaattacaagtttttgaaagttagg-gggaaaagtgcact 13030298  T
Q  114 ttagc 118  Q
    |||||    
T  13030297 ttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 7899888 - 7899985
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||| ||||||||||||||| ||||| |||    |||||||| ||| ||||||||| || ||| ||||||||||||||||||||||    
T  7899888 ggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 7899985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 802616 - 802692
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    |||||||||||||||||||| ||   ||||||||| ||| ||||||||||||||| ||||||||| |||||||||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaacttaggggggaaaagtacactttagcct 802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 18869157 - 18869222
Alignment:
Q  14 agatgcaaaatgg-ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaatt 78  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||| |||||||||    
T  18869157 agatgcaaaatgggctaaatcttaggggataaaaattgtagtttttgtacttagaaggccaaaatt 18869222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 18905995 - 18906090
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||| ||||||||||||||||||||| |||   || |||||| ||| ||||||||| ||||   ||||||||||||||||||||||    
T  18905995 gctaaatcttagggg-ctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagccta 18906090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 22587940 - 22588055
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtggga 103  Q
    ||||| || |||||||||  |||||||||||| ||| | |||||||||||||||||||||||   ||||||||| ||| ||||||||| ||| |  ||||    
T  22587940 aaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatag-gggccaaaattgcaagtttttgaaagttatgagggga 22588038  T
Q  104 aaagtgcactttagcct 120  Q
    ||| |||||||||||||    
T  22588039 aaaatgcactttagcct 22588055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 23869521 - 23869637
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||||||  ||||||||||||||||||||  |||   ||||||||| ||| ||||| ||  | |||  ||||    
T  23869521 aaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagtttttaaagttaagggtggaa 23869620  T
Q  105 aagtgcactttagccta 121  Q
    |||||||||||||||||    
T  23869621 aagtgcactttagccta 23869637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 18299488 - 18299373
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtggga 103  Q
    ||||| || |||||||||| ||||||||| |||||| | ||||||||||||||| ||| |||   |||||||||  || ||||||||| ||| ||  |||    
T  18299488 aaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtgga 18299389  T
Q  104 aaagtgcactttagcc 119  Q
    ||||||||||||||||    
T  18299388 aaagtgcactttagcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 36449854 - 36449775
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctat 122  Q
    ||||||||||||||||||| |||   ||||||||| ||| ||||||||| || ||| |||||||||||||||||||||||    
T  36449854 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctat 36449775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 18904462 - 18904365
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    |||||| |||||||| || ||||||||||||||||||| ||    ||||||||| ||  ||||||||| || ||| ||||||||||||||||||||||    
T  18904462 ggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagccta 18904365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 7898786 - 7898686
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctatt 123  Q
    |||||||||||||||| | ||||||||||||| | ||| ||| | || |||||| ||| ||||||||| || ||| | ||||||||||||||| ||||||    
T  7898786 ggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaacctatt 7898687  T
Q  124 t 124  Q
    |    
T  7898686 t 7898686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 22848286 - 22848190
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcct 120  Q
    |||||||||||||||  | ||||||||||||||||||  |||    |||||||| ||| ||||||||| ||||| ||| ||||||||||||||||||    
T  22848286 ggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 22848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 18869000 - 18868922
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagccta 121  Q
    ||||||||||||||||||  ||| | ||||||||| ||| ||||||||| ||||| | |||||||| ||||||||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagccta 18868922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 22587615 - 22587523
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttagg 98  Q
    ||||| || |||||||||  |||||||||||||||| | |||||||||||||||||| ||||    ||||||||  |||||||||||| |||||    
T  22587615 aaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagttagg 22587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 38839337 - 38839240
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||| | ||||||||||||||||||  |||   || |||||| ||| ||||||||| || ||| || |||| ||||||||||||||    
T  38839337 ggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagccta 38839240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 41879219 - 41879315
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    ||||||| |||||||  |||||||||||||| ||||| |||   ||||||||| ||| ||||||||| || ||| || ||||||| |||||||||||    
T  41879219 gctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagccta 41879315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 18797362 - 18797240
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg--g 102  Q
    ||||| || |||||||||  |||||||| |||||||   ||||||||||||||  ||| ||    | ||||||| ||| ||||||||| ||||| ||  |    
T  18797362 aaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtgg 18797263  T
Q  103 aaaagtgcactttagcctattta 125  Q
    |||||||||||||||||||||||    
T  18797262 aaaagtgcactttagcctattta 18797240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 11996799 - 11996761
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatag 66  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  11996799 taaatcttagagaactaaaattgtagtttttgtacatag 11996761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 11938787 - 11938891
Alignment:
Q  17 tgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcacttt 115  Q
    |||||||  ||||| |||||||||   |||||| || ||||||||| ||| |  |||||||| ||| ||||||||| ||||| | |||||||||||||||    
T  11938787 tgcaaaagagctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 11938885  T
Q  116 agccta 121  Q
    ||||||    
T  11938886 agccta 11938891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 18300711 - 18300822
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  ||||||||  |||||| | ||||||||||||||||||| |||   | ||||||| ||| ||| ||||| ||||| |||||    
T  18300711 aaggaccaaagatgcaaaggggctaaattataggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagttagg-gggaa 18300808  T
Q  105 aagtgcactttagc 118  Q
    ||||||| ||||||    
T  18300809 aagtgcaatttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 810806 - 810858
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta 96  Q
    |||||||||||||||||||| ||   ||||||||| ||| |||||||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactta 810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 1034474 - 1034570
Alignment:
Q  24 tggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcc 119  Q
    |||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||  ||||||||| ||| || ||||||||||||||||||||    
T  1034474 tggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 13830306 - 13830270
Alignment:
Q  80 caactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  13830306 caactttttcaaacttaggggggaaaagtgcacttta 13830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 36450947 - 36451023
Alignment:
Q  45 aaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    |||||||||||| ||||| |||    |||||||| ||| ||||||||| ||| | ||||||||||||||||| ||||    
T  36450947 aaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttaaccta 36451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 22776809 - 22776916
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactt 114  Q
    |||||||  |||||| ||||||||| | |||||||||||||||||||||||   ||||||||| ||||||| ||||| ||||| | ||||||||||||||    
T  22776809 atgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactt 22776908  T
Q  115 tagcctat 122  Q
    ||||||||    
T  22776909 tagcctat 22776916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 51037630 - 51037536
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||  | ||||||| ||||||||||||| ||| | | ||||||||||||||||||    
T  51037630 ggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaagggagaaaagtgcactttagcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 46721217 - 46721322
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactt 114  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||   |  |||||  ||||||||| ||| ||||| || |||||||||||||    
T  46721217 atgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactt 46721316  T
Q  115 tagcct 120  Q
    ||||||    
T  46721317 tagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 534605 - 534497
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcac 112  Q
    |||||||||  |||||||||||||||| | ||||||||||||||||||||||| | | ||||||| ||| ||||||| | |||| | || ||||||||||    
T  534605 agatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcac 534506  T
Q  113 tttagccta 121  Q
    |||||||||    
T  534505 tttagccta 534497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 19984925 - 19984845
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcctatt 123  Q
    |||||||||||||||||||||||   ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  19984925 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcctatt 19984845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 12703506 - 12703601
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    ||||||||| |||||| | ||||||||||||||||||| |||   ||||||||||||| ||||||||| ||||  || ||||||||||||||||||    
T  12703506 ggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagagggaaaaagtgcactttagcct 12703601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 7268835 - 7268932
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctattt 124  Q
    |||||||||||| | | ||||||||||||| | ||| ||| | ||||||||| ||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  7268835 ctaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttaacctattt 7268932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 7267738 - 7267642
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||| | ||||||||||||| ||||| |||   ||||||||| ||| ||||||||| ||| | ||||||||||||||||| ||||    
T  7267738 ggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttaaccta 7267642  T

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Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 12700288 - 12700173
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || ||||||||  |||||||||| ||||||   ||||||||||||||||||| |||   ||||||||| ||| ||||||||| ||||| ||| |    
T  12700288 aaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagg-gggga 12700190  T
Q  105 aagtgcactttagccta 121  Q
    |||||||||||||||||    
T  12700189 aagtgcactttagccta 12700173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 46720045 - 46719941
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactt 114  Q
    |||||||  ||||||||||||| |||||||||||||||||||| |||||||   ||||||||  ||||||||| ||| || ||| ||||||| |||||||    
T  46720045 atgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactt 46719946  T
Q  115 tagcc 119  Q
    |||||    
T  46719945 tagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 49216341 - 49216247
Alignment:
Q  26 gctaaatctt-aggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcc 119  Q
    |||||||||| ||||||| | |||||||||||||||||||||   | ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  49216341 gctaaatcttaaggggac-ataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

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Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 8876010 - 8875904
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactt 114  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||||    || |||||| || ||||||  ||||| ||| | |||||||||||||    
T  8876010 atgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactt 8875911  T
Q  115 tagccta 121  Q
    |||||||    
T  8875910 tagccta 8875904  T

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Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 8456572 - 8456479
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagc 118  Q
    |||||||||||||||| | ||||||||||||||||||  |||    |||||||| ||| ||||||||| ||||| || ||||||||||||||||    
T  8456572 ggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaattagggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 52104569 - 52104484
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    ||||||||||| | | |||||| |||||||||||||||| |  |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  52104569 taaatcttaggtggccaaaattatagtttttgtacatagga--ccaaaattacaactttttgaaagttagg-gggaaaagtgcatttta 52104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 54540796 - 54540892
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcct 120  Q
    |||||||||||||||| | ||||||||||||||||||| ||    | ||||||| ||| ||||||||| || ||| |||||||||||||||||||||    
T  54540796 ggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 54540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 29931318 - 29931223
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcctat 122  Q
    ||||||||||||| | ||||||||||||||||||  |||   || |||||| ||| ||||||||| ||||| | ||||||||||||||||||||||    
T  29931318 taaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctat 29931223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 29980472 - 29980377
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcctat 122  Q
    ||||||||||||| | ||||||||||||||||||  |||   || |||||| ||| ||||||||| ||||| | ||||||||||||||||||||||    
T  29980472 taaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctat 29980377  T

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Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 7758494 - 7758400
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||| | ||||||||||||||||||| |||   | ||||||| ||| ||||||||| || ||| || |||||||||||||||||||    
T  7758494 taaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagccta 7758400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 5029689 - 5029785
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    |||||| |||||||||   |||||||| ||||| |||| ||| | ||||||||| |||  ||||||||  |||| ||||||||||||||||||||||    
T  5029689 ggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccta 5029785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 19986065 - 19986175
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatg--ccaaaattacaactttttgaaacttaggtggg-aaaagtgc 110  Q
    |||||||||  || |||||||||| ||   ||||||||||||||| ||||||| | |  |||||||| ||| ||||||||||||| | ||| ||||||||    
T  19986065 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgc 19986164  T
Q  111 actttagccta 121  Q
    |||||||||||    
T  19986165 actttagccta 19986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 23770402 - 23770453
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacata 65  Q
    |||||||||  || ||||||||||||| ||||||||||||||||||||||||    
T  23770402 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacata 23770453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 24516554 - 24516459
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagcct 120  Q
    ||||||||||| ||| | ||||||||||||||| ||| |||  |||||||||| ||| ||||| ||| ||||| ||| ||||||||||||| ||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttggcct 24516459  T

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Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 51038803 - 51038894
Alignment:
Q  32 tcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctat 122  Q
    ||||| ||||| ||||||||||||||||| |||||   | ||||||| ||||||||| ||| || |||  ||||||||||||||||||||||    
T  51038803 tcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctat 51038894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 51470067 - 51469972
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcc 119  Q
    ||||||||||||||||  | ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| ||| || ||||||||||||||||||||    
T  51470067 ggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 29932707 - 29932800
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    |||||||||| |||   ||||||||||||||||||| |||   ||||||||| ||| ||||||||| |||| | |||||||||||||||||||||    
T  29932707 ctaaatcttaaggggtcaaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 29981861 - 29981954
Alignment:
Q  27 ctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    |||||||||| |||   ||||||||||||||||||| |||   ||||||||| ||| ||||||||| |||| | |||||||||||||||||||||    
T  29981861 ctaaatcttaaggggtcaaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29981954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 47614291 - 47614185
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcac 112  Q
    |||||||||  |||||||||||||||| | |||||||| |||||  ||| |||   ||||||||| ||| ||||||||| |||| | || ||||||||||    
T  47614291 agatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcac 47614192  T
Q  113 tttagcc 119  Q
    |||||||    
T  47614191 tttagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 49398220 - 49398130
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    ||||||||||| | | | ||||||||| ||||||| |||||||  ||||||| | || ||||| ||||||| | |||||||||||||||||    
T  49398220 gctaaatcttaagaggccaaaattgtaatttttgttcatagaacaccaaaataataattttttaaaacttaagggggaaaagtgcacttta 49398130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 28262287 - 28262190
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcctat 122  Q
    ||||||| | |||||| | |||||||| |||||  ||||| |   ||||||||  |||| |||||||| ||||| |||||||||||||||||||||||    
T  28262287 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaagtgcactttagcctat 28262190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 53901403 - 53901487
Alignment:
Q  34 ttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    ||||||| | || |||||||||||||||| ||    | ||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  53901403 ttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaacttagg-gggaaaagtgcactttagcc 53901487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 55192020 - 55192096
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcct 120  Q
    ||||||||||||||||||| ||||  ||||||||| ||| ||||||||| ||| | ||| ||| | |||||||||||    
T  55192020 aaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaatacactttagcct 55192096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 54654329 - 54654376
Alignment:
Q  42 ctaaaattgtagtttttgtacatagaatgccaaaattacaactttttg 89  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  54654329 ctaaaattgtaatttttgtacatagaagaccaaaattataactttttg 54654376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 22775825 - 22775783
Alignment:
Q  70 gccaaaattacaactttttgaaacttaggtgggaaaagtgcac 112  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||    
T  22775825 gccaaaattgcaactttttgaaagttaggggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 47610586 - 47610684
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcctat 122  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| |||| | ||||||||||||||||| |||||    
T  47610586 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaacctat 47610684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 54987014 - 54987103
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcacttta 116  Q
    |||||||||||| ||   |||||| |||||||| |||||||    | |||||  ||||||||||||||||||| |||||||||||||||||    
T  54987014 gctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaacttagg-gggaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 47609792 - 47609695
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||  | ||||||| ||||| |||| |||   | ||||||| ||| ||||||||| ||| || |||||||||||| |||||||||    
T  47609792 ggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagccta 47609695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 51348321 - 51348366
Alignment:
Q  70 gccaaaattacaactttttgaaacttaggtgggaaaagtgcacttt 115  Q
    ||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  51348321 gccaaaattacaacttttttaaatttaagggggaaaagtgcacttt 51348366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 11671395 - 11671443
Alignment:
Q  73 aaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    |||||| ||| ||||||||| ||||| || |||||||||||||||||||    
T  11671395 aaaattgcaagtttttgaaagttaggcggaaaaagtgcactttagccta 11671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 34019131 - 34019246
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||   ||||||| ||||||||| ||||||||||| ||||||| |||   | ||||||| ||| ||||||||| ||| | |||||    
T  34019131 aaggaccaaagatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaag-gggaa 34019229  T
Q  105 aagtgcactttagccta 121  Q
    || || |||||| ||||    
T  34019230 aaatgtactttacccta 34019246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 47615599 - 47615651
Alignment:
Q  70 gccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagccta 121  Q
    ||||||||| ||| ||||||||| ||| || ||||||||||||||||||||||    
T  47615599 gccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 47615651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 51347360 - 51347264
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctatt 123  Q
    |||||||||||||   ||||||||  ||||||| ||||||   |||||||| ||||||||| |||||| ||  ||| ||||||||||||| ||||||    
T  51347360 taaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcactttaacctatt 51347264  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 52839132 - 52839036
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    |||||||| |||| ||  ||||||||| ||||| |||| ||||  | ||||||||||| |||||| || |||| | ||||||| |||||||||||||    
T  52839132 ggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagcct 52839036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 21505529 - 21505409
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||| |||   |||||||||||||||||| || |   ||||||||  ||||||||||||| ||||| |||||    
T  21505529 aaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagttagg-gggaa 21505431  T
Q  105 aagtgcactttagcctatttat 126  Q
    ||||||||||||||||||||||    
T  21505430 aagtgcactttagcctatttat 21505409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 22629601 - 22629479
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta----ggtg 100  Q
    ||||| || |||||||||  |||||||||||||||| | ||||||||||||||||||| ||| | ||||||||||||| ||||||||| |||     | |    
T  22629601 aaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggaggg 22629502  T
Q  101 ggaaaagtgcactttagcctatt 123  Q
    |||||| ||||||||||||||||    
T  22629501 ggaaaaatgcactttagcctatt 22629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 22630458 - 22630555
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagccta 121  Q
    |||| ||||||||||| ||||||||||||||||||||  |||   ||||||||| ||| ||||||||| ||| || ||||||||||||||||||||||    
T  22630458 ggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagccta 22630555  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 30439364 - 30439460
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||||||||||||||||||||| |||||| |   ||||||   |||||||||||| ||| | ||  ||||||||||||||||||    
T  30439364 ggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaagttaaggggagaaagtgcactttagccta 30439460  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42886281 - 42886389
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcac 112  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||  |||   | ||||||| ||| ||||||||| ||||| || |||||||||||    
T  42886281 agatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcac 42886380  T
Q  113 tttagccta 121  Q
    |||| ||||    
T  42886381 tttaaccta 42886389  T

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Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 18371539 - 18371424
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttagg-tggga 103  Q
    ||||| || |||||||||   ||||||||||||||| | ||||||||||||||||||| ||    ||||||||| ||| ||||||||| |||||  ||||    
T  18371539 aaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggagggga 18371440  T
Q  104 aaagtgcactttagcc 119  Q
    ||||||||||||||||    
T  18371439 aaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 7500569 - 7500448
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||||||| | |||||||| |||| | ||| ||||    ||||||| ||| ||||||||| ||| | |||||    
T  7500569 aaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaagggggaa 7500470  T
Q  105 aagtgcactttagcctatttat 126  Q
    |||||||||||||||| |||||    
T  7500469 aagtgcactttagcctttttat 7500448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 18372463 - 18372544
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaa 106  Q
    |||||||||||||||| | ||||||||||||||||||| |||   ||||||||| ||| ||||||||| ||||| |||||||    
T  18372463 ggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaattaggggggaaaa 18372544  T

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Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 127430 - 127335
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||| ||||| |||| ||||| |||| |||    |||||||| ||| ||||||||| ||||| ||||||||||||||||||||||    
T  127430 ggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagccta 127335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 46482689 - 46482593
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactttagcctatt 123  Q
    |||||||||||||| ||||||| ||||||||||||||||   | |||| |||||| ||||||||| ||||| || ||||| |||||||||| |||||    
T  46482689 taaatcttaggggattaaaattatagtttttgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcactttagtctatt 46482593  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 31659718 - 31659622
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg--aaaagtgcactttagcc 119  Q
    |||||||||||||||| | ||||||||||||||||||| |||   | |||||||  || ||||||||| ||||| |||  |||||||||||||||||    
T  31659718 ggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 31661018 - 31661111
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    ||||| |||||||||||||||| |||||||||||| || |  | ||||||| ||| ||||||||| |||| | ||| |||||||||||||||||    
T  31661018 taaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcct 31661111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 14999141 - 14999259
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaa 104  Q
    ||||| || |||||||||  |||||||||||||||  | ||||||||||||||||||  |||   | ||||||| |||  |||||||| ||||| |||||    
T  14999141 aaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaa-gttttgaaaattaggggggaa 14999239  T
Q  105 aagtgcactttagcctattta 125  Q
    |||||||| ||||||||||||    
T  14999240 aagtgcac-ttagcctattta 14999259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 48934909 - 48935004
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcc 119  Q
    |||||| |||| |||||  |||||| |||||||||||| ||||  | ||||||||||| ||||||||| ||||| | |||||| ||||||||||||    
T  48934909 ggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 11658474 - 11658376
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagcctat 122  Q
    |||||| ||||  ||||| |||||||||||||||||||||||   || |||||| ||  ||||||||| || ||| |||||||||||| ||||||||||    
T  11658474 ggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcctat 11658376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 17782559 - 17782657
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcctat 122  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| |||| | |||||||||||||||||||||||    
T  17782559 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctat 17782657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 3227600 - 3227697
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtggg-aaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| ||||| ||| |||||||||||||||||||    
T  3227600 ggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagccta 3227697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 7501838 - 7501955
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || |||||||||  ||||| |||||| ||| | |||||||| |||||  ||| |||   ||||||||| ||| ||||||||| |||| | ||||    
T  7501838 aaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggga 7501937  T
Q  104 aaagtgcactttagccta 121  Q
    ||||||||||||||||||    
T  7501938 aaagtgcactttagccta 7501955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 20163585 - 20163658
Alignment:
Q  48 ttgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtg-ggaaaagtgcactttagcct 120  Q
    |||||||||||||||||||   ||||||||| ||| ||||||||| ||||| | ||| ||||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 31949417 - 31949320
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggt-gggaaaagtgcactttagccta 121  Q
    ||||||||||||||||    ||||||| ||||| |||| |||   ||||||||| ||| ||||||||| |||||  ||||||||||||||||||||||    
T  31949417 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagccta 31949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 11662557 - 11662649
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcacttta 116  Q
    |||||| |||| |||| | |||||| |||||||||||||||||  || |||||| ||| ||||||||| || ||| ||||||| |||||||||    
T  11662557 ggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 3227202 - 3227109
Alignment:
Q  25 ggctaaatctta-ggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagc 118  Q
    |||||||||||| |||| ||||| |||| ||||| |||| |||   ||||||||| ||| ||||||||| ||||| ||| |||||||||||||||    
T  3227202 ggctaaatcttaagggggctaaa-ttgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 17781756 - 17781663
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttag 117  Q
    ||||||||||||||||  | ||||||| ||||| |||| |||   | ||||||| ||| ||||||||| ||| || ||||||||||||||||||    
T  17781756 ggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 24597567 - 24597515
Alignment:
Q  70 gccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactttagccta 121  Q
    |||||||| ||||| ||||||||| |||| || ||||||||||||||||||||    
T  24597567 gccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagccta 24597515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 47369887 - 47369803
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttagg 98  Q
    |||||||||  |||||||||||| ||| | |||||| |||||||||||| ||  | || |||||| ||| ||||||||| |||||    
T  47369887 agatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttagg 47369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 337 - 233
Alignment:
Q  16 atgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactt 114  Q
    |||||||  |||||| ||||||||||| |||||| ||||||||||||||||    |||||||| ||||||||||||| || ||| ||| |||||||||||    
T  337 atgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactt 238  T
Q  115 tagcc 119  Q
    |||||    
T  237 tagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 3314 - 3410
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagccta 121  Q
    |||||||||||||||||| |||||| |||||||||||| ||    | |||||||  || ||||||||| | ||| ||||||||||||||||||||||    
T  3314 ggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaagtaaggggggaaaagtgcactttagccta 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 7632 - 7538
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    ||||||||| |||||  ||||||||||||||||||| |||||   | |||| |||||||||||| |||||||   ||| ||||||||||||||||    
T  7632 ggctaaatcgtagggagctaaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttatagggggaaagtgcactttagcc 7538  T

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Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 7421 - 7517
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcactttagcct 120  Q
    ||||||||||||||||   ||||||||||||| |||||||||   | ||||||   |||||||| |||||||| | |||| ||||||||||||||||    
T  7421 ggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcactttagcct 7517  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 61445 - 61559
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtggga 103  Q
    ||||| || |||||||||| ||||||||| |||||| | |||||| |||||||||||| |||   || |||||| ||| ||||||||| || |||  |||    
T  61445 aaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggagga 61544  T
Q  104 aaagtgcactttagc 118  Q
    |||||||||||||||    
T  61545 aaagtgcactttagc 61559  T

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Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 60196 - 60090
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtgggaaaagtgcac 112  Q
    |||||||||  ||||||||| ||||||   ||||||||||||||| |||||||   | ||||||| ||| ||||| ||| |||| |  ||||||||||||    
T  60196 agatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcac 60097  T
Q  113 tttagcc 119  Q
    |||||||    
T  60096 tttagcc 60090  T

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Target: scaffold0320 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 19594 - 19486
Alignment:
Q  14 agatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcac 112  Q
    |||||||||  || ||||||||||||||  ||||||||||||||| ||| |||   ||||||||| |||  |||||||| || ||| ||||||| |||||    
T  19594 agatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcac 19495  T
Q  113 tttagccta 121  Q
    |||||||||    
T  19494 tttagccta 19486  T

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Target: scaffold1303 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 1554 - 1435
Alignment:
Q  5 aaggagcacagatgcaaaatggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttag-gtggga 103  Q
    ||||| || |||||||||  ||||||||||||||||   |||||| |||||||| |||||||   | ||||||| ||| ||||| ||| |||| | ||||    
T  1554 aaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagaggggga 1455  T
Q  104 aaagtgcactttagcctatt 123  Q
    ||||| ||||||||||||||    
T  1454 aaagtacactttagcctatt 1435  T

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Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 23174 - 23081
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaagtgcactttagcc 119  Q
    ||||||| |||||||||  || ||||| ||||| |||| ||||  | ||||||| ||| ||||||||| ||||| ||||||||||||||||||||    
T  23174 ggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagttagg-gggaaaagtgcactttagcc 23081  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 49440 - 49538
Alignment:
Q  26 gctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgg-gaaaagtgcactttagcctatt 123  Q
    |||||||||||||||   ||||||||||||||| |  ||||   ||||||||| ||||||||| ||| ||| | || ||||||||||||||||||||||    
T  49440 gctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctatt 49538  T

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Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 39394 - 39339
Alignment:
Q  70 gccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagcctattt 124  Q
    |||||||||  |||||||| ||||||| || |||||||||||||||||||||||||    
T  39394 gccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctattt 39339  T

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Target: scaffold0294 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 5444 - 5541
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactta-ggtgggaaaagtgcactttagccta 121  Q
    |||||||||||| |||   ||||||||||||||||||| ||    | ||||||| ||| ||||||||| ||| || ||||||||||||||||||||||    
T  5444 ggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagccta 5541  T

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Target: scaffold0294; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 4537 - 4435
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttaggtgggaaaa-gtgcactttagcctatt 123  Q
    |||||||| |||||||  |||||||||| ||||||||| ||    || ||||||  || ||||||||| ||||| ||||||| ||||||||||||||| |    
T  4537 ggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagcctagt 4438  T
Q  124 tat 126  Q
    |||    
T  4437 tat 4435  T

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Target: scaffold0302 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 17546 - 17468
Alignment:
Q  44 aaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaactt-aggtgggaaaagtgcactttagccta 121  Q
    ||||||||||||||||||| |||   ||||||||| ||| ||||| ||| || ||| || |||||||||||||||||||    
T  17546 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagccta 17468  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 48399 - 48361
Alignment:
Q  28 taaatcttaggggactaaaattgtagtttttgtacatag 66  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  48399 taaatcttaggggaccaaaattatagtttttgtacatag 48361  T

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Target: scaffold0059 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 3770 - 3697
Alignment:
Q  25 ggctaaatcttaggggactaaaattgtagtttttgtacatagaatgccaaaattacaactttttgaaacttagg 98  Q
    ||||||||||||||||||||||||| |||||| | |||  ||   ||||||||| ||| ||||||||| |||||    
T  3770 ggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagttagg 3697  T

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