View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1508_high_3 (Length: 589)

Name: NF1508_high_3
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1508_high_3
NF1508_high_3
[»] chr6 (12 HSPs)
chr6 (19-504)||(33121058-33121543)
chr6 (267-412)||(32134018-32134164)
chr6 (518-578)||(33121817-33121877)
chr6 (255-390)||(5611112-5611247)
chr6 (267-389)||(2470347-2470469)
chr6 (327-387)||(27082309-27082369)
chr6 (334-385)||(8636806-8636857)
chr6 (267-382)||(19659610-19659724)
chr6 (334-392)||(31223188-31223247)
chr6 (249-382)||(227336-227471)
chr6 (285-388)||(17345855-17345958)
chr6 (278-316)||(31223253-31223291)
[»] chr2 (29 HSPs)
chr2 (267-416)||(42251575-42251725)
chr2 (268-376)||(40346717-40346825)
chr2 (292-382)||(41436328-41436418)
chr2 (270-382)||(18717853-18717965)
chr2 (285-392)||(31904236-31904342)
chr2 (267-353)||(23453377-23453463)
chr2 (240-392)||(13717171-13717322)
chr2 (270-382)||(40574141-40574253)
chr2 (270-416)||(13738393-13738540)
chr2 (286-388)||(14953021-14953123)
chr2 (268-393)||(17641166-17641291)
chr2 (295-387)||(4978775-4978867)
chr2 (295-387)||(4996683-4996775)
chr2 (295-382)||(28331277-28331364)
chr2 (266-320)||(36087408-36087462)
chr2 (306-387)||(6315885-6315966)
chr2 (278-372)||(7932897-7932991)
chr2 (286-388)||(18857431-18857533)
chr2 (306-360)||(43681305-43681359)
chr2 (266-382)||(4557574-4557691)
chr2 (268-360)||(1004771-1004862)
chr2 (292-376)||(9021482-9021566)
chr2 (286-382)||(29526315-29526411)
chr2 (297-419)||(8580477-8580600)
chr2 (287-382)||(27896466-27896561)
chr2 (286-320)||(7669194-7669228)
chr2 (267-320)||(3689614-3689667)
chr2 (285-382)||(38024194-38024290)
chr2 (287-387)||(43131774-43131874)
[»] chr5 (14 HSPs)
chr5 (277-382)||(27544592-27544697)
chr5 (265-416)||(22293952-22294104)
chr5 (265-387)||(41645032-41645152)
chr5 (249-360)||(30293800-30293911)
chr5 (268-387)||(36482050-36482168)
chr5 (267-415)||(11815880-11816029)
chr5 (270-387)||(30840596-30840712)
chr5 (338-388)||(41175393-41175443)
chr5 (245-382)||(6646291-6646428)
chr5 (292-392)||(8151815-8151918)
chr5 (286-372)||(7718502-7718589)
chr5 (265-316)||(34346951-34347002)
chr5 (331-372)||(26402066-26402107)
chr5 (292-360)||(27365991-27366059)
[»] chr8 (27 HSPs)
chr8 (267-382)||(1342325-1342439)
chr8 (265-387)||(10029160-10029282)
chr8 (286-414)||(29030422-29030554)
chr8 (279-389)||(32881109-32881219)
chr8 (268-416)||(41726864-41727013)
chr8 (266-385)||(44648932-44649051)
chr8 (266-392)||(11150916-11151041)
chr8 (268-392)||(35901412-35901536)
chr8 (268-382)||(18200677-18200791)
chr8 (285-417)||(18647474-18647606)
chr8 (263-416)||(31330968-31331123)
chr8 (266-372)||(6270144-6270249)
chr8 (266-388)||(13873694-13873816)
chr8 (287-376)||(42361529-42361618)
chr8 (266-382)||(600375-600491)
chr8 (286-387)||(23425277-23425382)
chr8 (267-377)||(27506943-27507051)
chr8 (278-416)||(43917555-43917694)
chr8 (267-372)||(3347506-3347610)
chr8 (270-392)||(20542380-20542502)
chr8 (306-377)||(17720212-17720283)
chr8 (270-352)||(2768559-2768641)
chr8 (334-392)||(23725687-23725745)
chr8 (249-382)||(40489853-40489985)
chr8 (286-377)||(3137408-3137499)
chr8 (285-387)||(547060-547166)
chr8 (277-313)||(33621438-33621474)
[»] chr4 (22 HSPs)
chr4 (266-392)||(27284065-27284191)
chr4 (240-381)||(22019607-22019748)
chr4 (268-388)||(12076424-12076544)
chr4 (268-387)||(20775070-20775189)
chr4 (266-414)||(13967814-13967964)
chr4 (267-387)||(16341097-16341217)
chr4 (266-382)||(12094961-12095077)
chr4 (267-389)||(27133545-27133667)
chr4 (266-382)||(31991452-31991568)
chr4 (270-392)||(2824814-2824936)
chr4 (306-413)||(19480508-19480616)
chr4 (268-360)||(28176801-28176892)
chr4 (285-390)||(7437842-7437947)
chr4 (279-352)||(22611904-22611977)
chr4 (288-357)||(31861444-31861513)
chr4 (286-383)||(21755875-21755974)
chr4 (266-366)||(31089779-31089878)
chr4 (277-372)||(55126783-55126879)
chr4 (266-320)||(31089510-31089564)
chr4 (306-392)||(39810737-39810822)
chr4 (338-392)||(52837333-52837387)
chr4 (286-346)||(37183077-37183137)
[»] chr1 (22 HSPs)
chr1 (269-387)||(30941466-30941584)
chr1 (267-416)||(33148126-33148275)
chr1 (266-382)||(26829495-26829611)
chr1 (242-382)||(8001717-8001857)
chr1 (277-352)||(48579929-48580004)
chr1 (266-392)||(46295865-46295991)
chr1 (239-372)||(11449073-11449206)
chr1 (279-387)||(30109224-30109333)
chr1 (277-365)||(10226467-10226555)
chr1 (267-382)||(5069500-5069614)
chr1 (285-392)||(17169283-17169390)
chr1 (245-372)||(27688492-27688619)
chr1 (267-389)||(13969094-13969216)
chr1 (268-376)||(50015771-50015879)
chr1 (334-385)||(34347572-34347623)
chr1 (338-387)||(3529109-3529158)
chr1 (286-387)||(5069701-5069802)
chr1 (318-371)||(40430824-40430877)
chr1 (249-373)||(34382610-34382733)
chr1 (267-317)||(39993446-39993496)
chr1 (288-336)||(763185-763233)
chr1 (334-415)||(38597446-38597531)
[»] chr3 (22 HSPs)
chr3 (266-382)||(38359050-38359166)
chr3 (249-382)||(50958863-50958996)
chr3 (286-415)||(48338782-48338912)
chr3 (278-391)||(53818820-53818932)
chr3 (278-382)||(55446736-55446839)
chr3 (268-413)||(44698189-44698335)
chr3 (292-389)||(29032408-29032505)
chr3 (297-382)||(31494030-31494115)
chr3 (249-392)||(6785771-6785915)
chr3 (277-400)||(11676741-11676865)
chr3 (266-399)||(28709560-28709693)
chr3 (286-382)||(47334863-47334959)
chr3 (267-374)||(4020109-4020216)
chr3 (267-392)||(635700-635825)
chr3 (285-382)||(49261783-49261880)
chr3 (279-351)||(8326171-8326243)
chr3 (287-387)||(34145920-34146019)
chr3 (267-415)||(1711919-1712068)
chr3 (306-382)||(4128727-4128803)
chr3 (285-415)||(49543174-49543305)
chr3 (286-387)||(25319461-25319562)
chr3 (292-324)||(31904734-31904766)
[»] chr7 (24 HSPs)
chr7 (268-387)||(1309720-1309839)
chr7 (242-372)||(8896568-8896698)
chr7 (279-382)||(43626350-43626453)
chr7 (279-415)||(23142660-23142797)
chr7 (265-410)||(37928274-37928420)
chr7 (292-414)||(16979912-16980035)
chr7 (287-388)||(31487725-31487826)
chr7 (292-385)||(34993148-34993241)
chr7 (286-360)||(31850762-31850836)
chr7 (287-372)||(8746149-8746234)
chr7 (270-388)||(16685728-16685848)
chr7 (270-388)||(17659964-17660084)
chr7 (308-417)||(30027931-30028041)
chr7 (245-382)||(43118809-43118946)
chr7 (266-321)||(34993092-34993147)
chr7 (278-320)||(1554025-1554067)
chr7 (270-414)||(19676965-19677110)
chr7 (268-377)||(25530541-25530650)
chr7 (332-382)||(1521261-1521311)
chr7 (286-416)||(12810161-12810291)
chr7 (268-382)||(42888306-42888420)
chr7 (338-387)||(22931924-22931973)
chr7 (289-382)||(27235256-27235349)
chr7 (306-370)||(23080659-23080723)
[»] scaffold0079 (1 HSPs)
scaffold0079 (267-387)||(51644-51764)
[»] scaffold0036 (1 HSPs)
scaffold0036 (249-352)||(36565-36668)
[»] scaffold0002 (1 HSPs)
scaffold0002 (265-415)||(120638-120789)
[»] scaffold0204 (1 HSPs)
scaffold0204 (286-391)||(15380-15485)


Alignment Details
Target: chr6 (Bit Score: 418; Significance: 0; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 19 - 504
Target Start/End: Original strand, 33121058 - 33121543
Alignment:
Q  19 attcaaccgttgaagcttttgttctgtctgaatctgaatctccatctgtcccaatagtatgtgtaacaagaattatcgttatgctttacctaaaatggga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||    
T  33121058 attcaaccgttgaagcttttgttctgtctgaatctgaatctccaaatgtcccaacagtatgtgtaacaagaattattgttatgctttacctaaaattgga 33121157  T
Q  119 tcttagattggattagttatcattaataaactaattgatttcaattaaaatcaaattggatgtaatctcaacgtcttgaagctatgatgcagtgttttcg 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33121158 tcttagattggattagttatcattaataaactaattgatttcaattaaaatcaaattggatgtaatctcaacgtcttgaagctatgatgcggtgttttcg 33121257  T
Q  219 aaactacttatactatattttgagttttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgt 318  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||| ||||||||||| |||||||||  |||||||||||||    
T  33121258 aaactacttatactatattttgggttttgttaaccagtgcctttaaagtaatggttaagaaattttcaaataaaatttttgtcttgaaaatataagatgt 33121357  T
Q  319 tattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccctagaacactagttagcattctcctact 418  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  33121358 tattttttatcaaacaatgattacacaactttttcatgaaaatttacttattttttatgtttaatcaataccctagaacactagttagcattctcctact 33121457  T
Q  419 attttctactatctaattaagaaaactaatcatttctctaaatagaaaccttgatatcgagattgttggccagtaatattttggta 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33121458 attttctactatctaattaagaaaactaatcatttctctaaatagaaaccttgatatcgagattgttggccagtaatattttggta 33121543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 267 - 412
Target Start/End: Complemental strand, 32134164 - 32134018
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    |||| |||| ||||||| |||||| ||||||||| ||   |||||||||||||||||| ||||||  ||||||||||||||||||||| ||||| |||||    
T  32134164 caatagttaaggaatctacaaatagaaattttgttttgagaatataagatgttattttttatcaagtaatgattacacaactttttcaagaaaacttact 32134065  T
Q  367 tattttggatgtttaatcaataccc-tagaacactagttagcattct 412  Q
    |||||| |||| |||| |||| ||| |||  ||||||||||||||||    
T  32134064 tattttagatgcttaaccaatgcccttagggcactagttagcattct 32134018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 518 - 578
Target Start/End: Original strand, 33121817 - 33121877
Alignment:
Q  518 acaaatattttggtattgttaaaagtgatataaatgcatatcatcattatattagtttcat 578  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33121817 acaaatattttggtattgttaaaagtgatataaatgcatatcatcattatattagtttcat 33121877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 255 - 390
Target Start/End: Original strand, 5611112 - 5611247
Alignment:
Q  255 gtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttca 354  Q
    |||| ||||| | ||| |||| |||||||  ||||| ||||||||||||||||||||||||||||| |||  |||||| ||| |||| ||||||| ||||    
T  5611112 gtgcttttaacgaaattgttaaggaatctataaatagaaattttgtcttagaaatataagatgttacttttaatcaaataataattatacaacttattca 5611211  T
Q  355 tgaaaatttacttattttggatgtttaatcaatacc 390  Q
    | |||| |||||| |||||||||||||| |||||||    
T  5611212 taaaaacttacttgttttggatgtttaaccaatacc 5611247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 389
Target Start/End: Complemental strand, 2470469 - 2470347
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| ||||||  |||||| ||| |||||||| |||||||||||| |||||||   ||||  |||||||| ||||||||||||| |||| ||||     
T  2470469 caatggttaaggaatcaccaaatagaaagtttgtctttgaaatataagatattatttttgttcaagtaatgattatacaactttttcataaaaacttacc 2470370  T
Q  367 tattttggatgtttaatcaatac 389  Q
    |||||| |||| |||| ||||||    
T  2470369 tattttagatgcttaaccaatac 2470347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 27082369 - 27082309
Alignment:
Q  327 atcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaat 387  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  27082369 atcaaataatcattacacaactttttcatgaaaatttacttgttttggttgtttaaccaat 27082309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 8636806 - 8636857
Alignment:
Q  334 aatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    |||||||||| |||||||||||||||| |||||||||||| ||| |||||||    
T  8636806 aatgattacataactttttcatgaaaacttacttattttgtatgcttaatca 8636857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 19659610 - 19659724
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||| | ||||||| |||| | ||||||||| | | |||||| |||| |||| ||  |||||  ||||||||||||||||||| || |||| |||||    
T  19659610 caatggtcaaggaatctacaaaaataaattttgtttga-aaatatgagatattatatttgatcaactaatgattacacaacttttttataaaaacttact 19659708  T
Q  367 tattttggatgtttaa 382  Q
    |||||| |||||||||    
T  19659709 tattttagatgtttaa 19659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 31223247 - 31223188
Alignment:
Q  334 aatgattacacaacttttt-catgaaaatttacttattttggatgtttaatcaataccct 392  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| ||||    
T  31223247 aatgattacacaacttttttcatgaaaacttacttgttttggatgtttaaccaatgccct 31223188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 382
Target Start/End: Complemental strand, 227471 - 227336
Alignment:
Q  249 taaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctat-caaacaatgattacacaa- 346  Q
    ||||||||| | |||  |||||||||| |||||||  ||||| ||||||| | ||  ||||||||||||||| |||  ||  |||||||||||||||||     
T  227471 taaccagtgtccttagggcaatggttaaggaatctataaatagaaatttttttttgaaaatataagatgttacttttgataaaaacaatgattacacaat 227372  T
Q  347 ctttttcatgaaaatttacttattttggatgtttaa 382  Q
     |||||||| |||  |||||| ||||||||| ||||    
T  227371 ttttttcataaaatcttacttcttttggatgcttaa 227336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 388
Target Start/End: Original strand, 17345855 - 17345958
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatc 384  Q
    |||||||||||||||| ||| |||||||| |||||| |||  |||||  |  ||||||| ||||||||||  |||||||| || ||||| ||| |||| |    
T  17345855 caaataaaaattttgttttaaaaatataaaatgttacttttgatcaagtagcgattacataactttttcactaaaatttatttgttttgaatgcttaacc 17345954  T
Q  385 aata 388  Q
    ||||    
T  17345955 aata 17345958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 31223291 - 31223253
Alignment:
Q  278 gaatcttcaaataaaaattttgtcttagaaatataagat 316  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  31223291 gaatctacaaataaaaattttgtcttggaaatataagat 31223253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 7e-32; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 267 - 416
Target Start/End: Complemental strand, 42251725 - 42251575
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| |||||||  || |||||| ||| |||||||||||||| |||||||||| |||||  |||||||||||||||||||||||| ||| |||||    
T  42251725 caatggttaaggaatctctaagtaaaaaatttatcttagaaatataacatgttattttttatcattcaatgattacacaactttttcatgtaaacttact 42251626  T
Q  367 tattttggatgtttaatcaataccctaga-acactagttagcattctccta 416  Q
    | ||||||||| |||| |||| |||| || ||||||||||||||| |||||    
T  42251625 tgttttggatgcttaaccaatgcccttgagacactagttagcattttccta 42251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 268 - 376
Target Start/End: Complemental strand, 40346825 - 40346717
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| ||||||| || ||| ||||||||| ||  |||||||||||||||||||  |||||| ||||||| |||||||||||||| |||| ||||||    
T  40346825 aatggttaaggaatctacatatagaaattttgtattgaaaatataagatgttatttttgatcaaataatgattgcacaactttttcataaaaacttactt 40346726  T
Q  368 attttggat 376  Q
    |||||||||    
T  40346725 attttggat 40346717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 41436418 - 41436328
Alignment:
Q  292 aaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||| |||||||| ||||||||||||||||  || ||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  41436418 aaattttatcttagaagtataagatgttatttttgataaaataatgattacacaactttttcatgaaaacttacttgttttggatgcttaa 41436328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 18717965 - 18717853
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttat 369  Q
    |||||| ||||| | |||||| ||||||| | ||| ||||||||||||||| |||  |||||  ||||||||||||||||||||||||||||||  || |    
T  18717965 tggttaaggaatttacaaatagaaattttattttaaaaatataagatgttacttttgatcaagtaatgattacacaactttttcatgaaaatttgtttgt 18717866  T
Q  370 tttggatgtttaa 382  Q
    |||||||| ||||    
T  18717865 tttggatgcttaa 18717853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 31904236 - 31904342
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatc 384  Q
    |||||||| ||||| ||||| |||||||| ||||||||||  |||||  ||||||||||||| |||||||| |||||||||||||||| |||| |||| |    
T  31904236 caaataaatattttatcttaaaaatataaaatgttatttttaatcaagtaatgattacacaattttttcat-aaaatttacttattttagatgattaacc 31904334  T
Q  385 aataccct 392  Q
    ||| ||||    
T  31904335 aatgccct 31904342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 23453463 - 23453377
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttc 353  Q
    |||| |||| ||||||| |||||||||||||||||||  ||||||||||||||| |||  |||||| || |||||||||||||||||    
T  23453463 caatagttaaggaatctacaaataaaaattttgtcttgaaaatataagatgttacttttgatcaaataaagattacacaactttttc 23453377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 392
Target Start/End: Complemental strand, 13717322 - 13717171
Alignment:
Q  240 gagttttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgat 339  Q
    |||| ||||||||| ||||| | | |||||| |||| ||||| | |||||| ||||||||||||  |||||||| |||||||||| ||  ||  ||| ||    
T  13717322 gagtcttgttaaccggtgccctcagagcaatagttaaggaatatacaaatagaaattttgtcttgaaaatataaaatgttatttt-taataagtaataat 13717224  T
Q  340 tacacaactttttcatgaaaatttacttattttggatgtttaatcaataccct 392  Q
    |||| |||||||| ||||||| ||||||||||| |||| |||| || ||||||    
T  13717223 tacataactttttgatgaaaacttacttattttagatgcttaaccattaccct 13717171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 40574141 - 40574253
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttat 369  Q
    |||||| ||||||| |||||| |||||||||||| ||||||||| |||| | |||  ||  |  ||| |||||||||||||||||||||||| ||||| |    
T  40574141 tggttaaggaatctacaaatagaaattttgtcttggaaatataaaatgtaacttttgatagagtaataattacacaactttttcatgaaaatgtacttgt 40574240  T
Q  370 tttggatgtttaa 382  Q
    |||||||| ||||    
T  40574241 tttggatgcttaa 40574253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 416
Target Start/End: Original strand, 13738393 - 13738540
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttat 369  Q
    |||||| |||||||  ||||||||||||||| ||  ||||||||||||||| ||   || ||  ||||||||||||| ||||| || |||| |||||| |    
T  13738393 tggttaaggaatctataaataaaaattttgttttgaaaatataagatgttacttctgataaagtaatgattacacaatttttttataaaaacttacttgt 13738492  T
Q  370 tttggatgtttaatcaata-ccctagaacactagttagcattctccta 416  Q
    |||||||| |||| ||||| || ||| |||||||||  ||||||||||    
T  13738493 tttggatgcttaaccaatatccttaggacactagttgccattctccta 13738540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 286 - 388
Target Start/End: Complemental strand, 14953123 - 14953021
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    ||||||||||||||||||| |||||||| ||||||||||  ||| |  |||||||| |||| |||||  |  |||||||||||||||||||| |||| ||    
T  14953123 aaataaaaattttgtcttaaaaatataaaatgttatttttgatcgagtaatgattagacaatttttttttacaaatttacttattttggatgcttaacca 14953024  T
Q  386 ata 388  Q
    |||    
T  14953023 ata 14953021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 17641291 - 17641166
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| |||||||  ||||||||| ||||| || ||||||||| |||||| |||  || ||  ||| ||| ||||||||||  ||||||| ||||||    
T  17641291 aatggttaaggaatctataaataaaaactttgtttttgaaatataaaatgttacttttgataaagaaattattgcacaacttttcaatgaaaacttactt 17641192  T
Q  368 attttggatgtttaatcaatacccta 393  Q
    ||||| |||| ||||||| |||||||    
T  17641191 attttagatgcttaatcagtacccta 17641166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 4978775 - 4978867
Alignment:
Q  295 ttttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaat 387  Q
    |||||||||  ||||||||||||||| |||  |||||  |||||||||||||| |||| || |||| ||| ||||||||||||||||| ||||    
T  4978775 ttttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatgtttaaccaat 4978867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 4996683 - 4996775
Alignment:
Q  295 ttttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaat 387  Q
    |||||||||  ||||||||||||||| |||  |||||  |||||||||||||| |||| || |||| ||| ||||||||||||||||| ||||    
T  4996683 ttttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatgtttaaccaat 4996775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 382
Target Start/End: Original strand, 28331277 - 28331364
Alignment:
Q  295 ttttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||||| ||||||||| || |||||||  |||||  ||||||||||||||| |||||| |||| |||||||||||| ||| ||||    
T  28331277 ttttgtcttggaaatataaaatattatttttgatcaagtaatgattacacaactctttcataaaaacttacttattttgaatgcttaa 28331364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 36087462 - 36087408
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgtta 320  Q
    |||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||    
T  36087462 gcaatggttaaggaatctacaaatagaaattttatcttagaaatataagatgtta 36087408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 6315966 - 6315885
Alignment:
Q  306 aaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaat 387  Q
    |||||||||||||||||||  |||||  ||||||||||||| ||||| |  |||||||| || |||||||||||||| ||||    
T  6315966 aaatataagatgttatttttgatcaagtaatgattacacaatttttttacaaaaatttatttgttttggatgtttaaccaat 6315885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 372
Target Start/End: Original strand, 7932897 - 7932991
Alignment:
Q  278 gaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttatttt 372  Q
    |||||| |||||| ||||||||| |||||||| |||||| ||| |||  || ||  ||||||| |||||||||||| | |||| |||||||||||    
T  7932897 gaatctacaaatagaaattttgttttagaaatgtaagattttactttggataaagtaatgattgcacaactttttcgtaaaaacttacttatttt 7932991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 388
Target Start/End: Complemental strand, 18857533 - 18857431
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    ||||||||| ||||||||| |||||| | ||||||| ||  || ||  ||| ||||||| |  ||||||||||||||||||| ||||| ||| |||||||    
T  18857533 aaataaaaagtttgtcttaaaaatatgatatgttatctttgataaagtaataattacacgatattttcatgaaaatttacttgttttgaatgcttaatca 18857434  T
Q  386 ata 388  Q
    |||    
T  18857433 ata 18857431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 43681305 - 43681359
Alignment:
Q  306 aaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaa 360  Q
    ||||||||||||||||||| || |||| |||||||| ||||||||||||| ||||    
T  43681305 aaatataagatgttattttttaccaaataatgattatacaactttttcataaaaa 43681359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 4557691 - 4557574
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaac-tttttcatgaaaattta 364  Q
    ||||||||||  |||||| |||||| ||||||| |||| ||||||||||| ||||||||  ||  |  ||| ||||| |||| |||||||| |||| |||    
T  4557691 gcaatggttaaagaatctacaaatagaaattttatcttggaaatataagaagttatttttgattgagtaattattactcaacttttttcataaaaactta 4557592  T
Q  365 cttattttggatgtttaa 382  Q
    ||||| ||||||| ||||    
T  4557591 cttatcttggatgcttaa 4557574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 1004771 - 1004862
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaa 360  Q
    |||||||| ||||||| |||||| ||||||||||||  |||||||| || ||| |||  || |||  ||||||||||||||||||||| ||||    
T  1004771 aatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatattacttttgat-aaattatgattacacaactttttcataaaaa 1004862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 376
Target Start/End: Complemental strand, 9021566 - 9021482
Alignment:
Q  292 aaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggat 376  Q
    |||||||||||| ||||| ||||||||||||||  |  ||| ||||||||||| | |||||  |||||| || ||||||||||||    
T  9021566 aaattttgtcttggaaatgtaagatgttatttttgactaaataatgattacactatttttttgtgaaaactttcttattttggat 9021482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 29526315 - 29526411
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||||||||  ||||| |||||||| || |||||||  || ||  ||||||||||||| ||||| |||||||  ||||||||||  ||||||||    
T  29526315 aaataaaaatttaatcttaaaaatataaaatattatttttaataaagtaatgattacacaatttttttatgaaaacctacttattttaaatgtttaa 29526411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 419
Target Start/End: Complemental strand, 8580600 - 8580477
Alignment:
Q  297 ttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccc-taga 395  Q
    ||||||| |||||||||||||||| |||  || ||  ||| |||| |||  ||||||||||||| | ||||| |||||||| |||| |||| ||| |||     
T  8580600 ttgtcttggaaatataagatgttacttttgattaagtaataattagacacatttttcatgaaaactaacttactttggatgcttaaccaatgcccttagg 8580501  T
Q  396 acactagttagcattctcctacta 419  Q
     |||| ||||||||||||| ||||    
T  8580500 gcactggttagcattctccaacta 8580477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 382
Target Start/End: Complemental strand, 27896561 - 27896466
Alignment:
Q  287 aataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    |||| ||| ||||| ||||||||||||| ||||| |||  ||  |  ||| ||||||||||||||| || |||| ||||||||||||| |||||||    
T  27896561 aatagaaaatttgttttagaaatataagctgttacttttgatttagtaataattacacaactttttaattaaaacttacttattttggttgtttaa 27896466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 7669228 - 7669194
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgtta 320  Q
    ||||||||||||||||||| |||||||||||||||    
T  7669228 aaataaaaattttgtcttaaaaatataagatgtta 7669194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 3689614 - 3689667
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgtta 320  Q
    ||||||||| ||| ||| |||||| ||||||| |||| ||||||||||||||||    
T  3689614 caatggttaaggattctacaaatagaaattttatctttgaaatataagatgtta 3689667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 382
Target Start/End: Original strand, 38024194 - 38024290
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    |||||| ||||||| ||||| ||||||||||| ||| |||  |||||| ||| |||||| ||||||||||| ||||    ||| ||||||||||||||    
T  38024194 caaatagaaattttatcttaaaaatataagatattacttt-gatcaaataataattacataactttttcattaaaacgggcttgttttggatgtttaa 38024290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 43131774 - 43131874
Alignment:
Q  287 aataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaa 386  Q
    |||||||||||||||||| |||| |||| |  || |||  |||||  ||| ||||||| || |||| || |||| |||||| |||||| |||||||||||    
T  43131774 aataaaaattttgtcttaaaaatgtaagtttatacttttgatcaagtaataattacactacctttttataaaaacttacttgttttggttgtttaatcaa 43131873  T
Q  387 t 387  Q
    |    
T  43131874 t 43131874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 7e-29; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 277 - 382
Target Start/End: Complemental strand, 27544697 - 27544592
Alignment:
Q  277 ggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggat 376  Q
    ||||||| |||||| ||||||| ||||  ||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||| ||||||||    
T  27544697 ggaatctacaaatagaaattttatcttgaaaatataagatgttattttttatcatgtaatgattacacaactttttcatgaaaatttacttgttttggat 27544598  T
Q  377 gtttaa 382  Q
    ||||||    
T  27544597 gtttaa 27544592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 265 - 416
Target Start/End: Complemental strand, 22294104 - 22293952
Alignment:
Q  265 agcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaattta 364  Q
    ||||||||||| ||||||| |||||| |||||||||||| |||||||||||| ||  |||  |||||| ||| ||| |||||||||||||| |||| |||    
T  22294104 agcaatggttaaggaatctacaaatagaaattttgtcttggaaatataagatattggttttgatcaaataattattgcacaactttttcataaaaactta 22294005  T
Q  365 cttattttggatgtttaatcaataccctag-aacactagttagcattctccta 416  Q
    ||| ||||| |||||||| ||||||||| |   |||| |||||||||||||||    
T  22294004 cttgttttgaatgtttaaccaatacccttgtggcactggttagcattctccta 22293952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 41645152 - 41645032
Alignment:
Q  265 agcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaattta 364  Q
    |||| ||||||  ||||||  |||||||||||||||||   ||||||||||| ||||||| ||||||  ||||||||||||||  |||||||||||||||    
T  41645152 agcattggttaaagaatctataaataaaaattttgtctagaaaatataagatattattttttatcaagtaatgattacacaac--tttcatgaaaattta 41645055  T
Q  365 cttattttggatgtttaatcaat 387  Q
    |||||||| |||| |||| ||||    
T  41645054 cttattttagatgcttaagcaat 41645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 30293800 - 30293911
Alignment:
Q  249 taaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaact 348  Q
    ||||||||||| ||| || | ||||||  |||||| |||||| ||||||||||||| ||||||||||||||| |||  |||||  |||||||||| || |    
T  30293800 taaccagtgcccttagagtattggttaaagaatctacaaatagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacataatt 30293899  T
Q  349 ttttcatgaaaa 360  Q
    ||||||||||||    
T  30293900 ttttcatgaaaa 30293911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 387
Target Start/End: Complemental strand, 36482168 - 36482050
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    ||||||||  |||||| |||||| ||||||||| ||  ||||||||||||||| |||  |||||| |||| |||||||||||||| ||||||| ||| ||    
T  36482168 aatggttaatgaatctacaaatagaaattttgttttgaaaatataagatgttacttttgatcaaataatgtttacacaacttttttatgaaaactta-tt 36482070  T
Q  368 attttggatgtttaatcaat 387  Q
    ||||| ||||||||| ||||    
T  36482069 attttagatgtttaaccaat 36482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 415
Target Start/End: Complemental strand, 11816029 - 11815880
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    |||||||||  ||||||  ||||| ||||||||||||  ||||||||||||||| |||  || ||  ||||||||||||  |||||||| |||| |||||    
T  11816029 caatggttaatgaatctaaaaatagaaattttgtcttgaaaatataagatgttacttttgataaagtaatgattacacatatttttcataaaaacttact 11815930  T
Q  367 tattttggatgtttaatcaataccc-tagaacactagttagcattctcct 415  Q
    | ||||  || |||||||| | ||| ||  ||||||||||||||||||||    
T  11815929 tgttttaaatatttaatcattgcccttaagacactagttagcattctcct 11815880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 30840596 - 30840712
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttat 369  Q
    |||||| ||||||| | || | ||| ||||||||  ||||||||||||||| |||  |||||  |||||||||||||||||||  |||||| |||||| |    
T  30840596 tggttaaggaatctactaacagaaaatttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacttttt-ttgaaaacttacttgt 30840694  T
Q  370 tttggatgtttaatcaat 387  Q
    |||||||| |||||||||    
T  30840695 tttggatgcttaatcaat 30840712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 41175393 - 41175443
Alignment:
Q  338 attacacaactttttcatgaaaatttacttattttggatgtttaatcaata 388  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||| |||||    
T  41175393 attacacaattttttcatgaaaacttacttaatttggatgtttaaccaata 41175443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 382
Target Start/End: Complemental strand, 6646428 - 6646291
Alignment:
Q  245 ttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacac 344  Q
    ||||||||| ||||| ||| ||||||| |||   ||| | ||||||||| |||| | || ||||||||| |||||| |||  || |   |||||||||||    
T  6646428 ttgttaaccggtgcccttagagcaatgattaaataatatacaaataaaatttttatatttgaaatataatatgttacttttgataatgtaatgattacac 6646329  T
Q  345 aactttttcatgaaaatttacttattttggatgtttaa 382  Q
    || |||||||| || |||||||| |||| |||||||||    
T  6646328 aattttttcattaatatttacttgttttagatgtttaa 6646291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 392
Target Start/End: Original strand, 8151815 - 8151918
Alignment:
Q  292 aaattttgtcttagaaatataagatgttattttctatcaa--acaatgattacacaactttttcatgaaaa-tttacttattttggatgtttaatcaata 388  Q
    ||||||||| ||  ||||||||||||||| |||  |||||  | ||| |||| | |||||||| ||||||| ||||||||||||| || |||||||||||    
T  8151815 aaattttgttttgaaaatataagatgttacttttaatcaagtataataattatataacttttttatgaaaaatttacttattttgtatatttaatcaata 8151914  T
Q  389 ccct 392  Q
    ||||    
T  8151915 ccct 8151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 7718589 - 7718502
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaa-ctttttcatgaaaatttacttatttt 372  Q
    ||||| ||||||| ||||| |||||||||||||||||||  || ||| ||| |||||||||  |||||||| |||| ||| |||||||    
T  7718589 aaatataaattttatcttaaaaatataagatgttatttttaatgaaataatcattacacaatttttttcataaaaacttatttatttt 7718502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 34347002 - 34346951
Alignment:
Q  265 agcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagat 316  Q
    ||||||||||| ||||||| |||||||||| ||||||||  |||||||||||    
T  34347002 agcaatggttaaggaatctacaaataaaaaatttgtcttgaaaatataagat 34346951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 26402066 - 26402107
Alignment:
Q  331 aacaatgattacacaactttttcatgaaaatttacttatttt 372  Q
    ||||||||||||||||||||||  |||||| |||||||||||    
T  26402066 aacaatgattacacaactttttattgaaaaattacttatttt 26402107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 27365991 - 27366059
Alignment:
Q  292 aaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaa 360  Q
    ||||||| |||| |||||||||||| ||| |||  | |||| ||||||||| ||| |||||||||||||    
T  27365991 aaattttatcttggaaatataagatattactttagaccaaataatgattacgcaattttttcatgaaaa 27366059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 1342439 - 1342325
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    |||||||||| ||||||||||||| ||||||| |||| |||||||||||||||| |||  || ||||||||||||||||||||||| ||||||| |||||    
T  1342439 caatggttagagaatcttcaaatagaaattttatcttggaaatataagatgttacttttgat-aaacaatgattacacaacttttttatgaaaacttact 1342341  T
Q  367 tattttggatgtttaa 382  Q
    |||||| |||| ||||    
T  1342340 tattttagatgcttaa 1342325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 10029282 - 10029160
Alignment:
Q  265 agcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaattta 364  Q
    ||||||||||| | ||||| |||||||||||||| |||| |||||||||||||||| |||  |||||  |||||||| ||||||||||||| ||||||||    
T  10029282 agcaatggttaagaaatctacaaataaaaattttatcttggaaatataagatgttacttttgatcaagtaatgattatacaactttttcataaaaattta 10029183  T
Q  365 cttattttggatgtttaatcaat 387  Q
    |||  |||||||| |||| ||||    
T  10029182 cttgatttggatgcttaaccaat 10029160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 286 - 414
Target Start/End: Complemental strand, 29030554 - 29030422
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttatt---ttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||| |||||||||||| ||||||||| ||||||||   || ||||||| ||||||| ||||| ||||| || ||||||||||||||||  ||||||||    
T  29030554 aaatataaattttgtctttgaaatataacatgttattattttttatcaaataatgattgcacaatttttttataaaaatttacttattttaaatgtttaa 29030455  T
Q  383 tcaataccc-tagaacactagttagcattctcc 414  Q
    ||||||||| || |||| |||||||||||||||    
T  29030454 tcaatacccttataacattagttagcattctcc 29030422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 279 - 389
Target Start/End: Complemental strand, 32881219 - 32881109
Alignment:
Q  279 aatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgt 378  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||   ||||||||||||| ||||  | |||| |||||||||||||||||    
T  32881219 aatctacaaataaaaattttgtcttaaaaatataagatattattttttatcaagttatgattacacaacattttattaaaaacttacttattttggatgt 32881120  T
Q  379 ttaatcaatac 389  Q
    |||| ||||||    
T  32881119 ttaaccaatac 32881109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 416
Target Start/End: Complemental strand, 41727013 - 41726864
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||| ||| ||  |||||||||| |  |||||||| |||| ||||||    
T  41727013 aatggttaaggaatctacaaataaaaattttgtcttggaaatataaaatgttattttttataaagtaatgattacatagttttttcataaaaacttactt 41726914  T
Q  368 attttggatgtttaatcaataccc-tagaacactagttagcattctccta 416  Q
    ||||| |||| |||| || | ||| |||  ||||||||| ||||||||||    
T  41726913 attttagatgcttaaccattgcccttagggcactagttatcattctccta 41726864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 266 - 385
Target Start/End: Original strand, 44648932 - 44649051
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||||||| ||||||| |||||| ||||||||||||  |||||||| |||||| |||  || ||  ||||||||||||||||||||||||||| |||     
T  44648932 gcaatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttgataaagtaatgattacacaactttttcatgaaaacttat 44649031  T
Q  366 ttattttggatgtttaatca 385  Q
    || ||||||||| |||||||    
T  44649032 ttgttttggatgcttaatca 44649051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 266 - 392
Target Start/End: Complemental strand, 11151041 - 11150916
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||| |||  |||||| ||||||||||||| |||||  | |||| ||||    
T  11151041 gcaatgattaaggaatctacaaataaaatttttgtcttagaaatataagatgttacttttgatcaaataatgattacacaa-ttttttttaaaaacttac 11150943  T
Q  366 ttattttggatgtttaatcaataccct 392  Q
    |||||||| ||| |||| |||| ||||    
T  11150942 ttattttgaatgcttaaccaatgccct 11150916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 268 - 392
Target Start/End: Original strand, 35901412 - 35901536
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| ||||||| |||||| ||||||||| ||  |||| |||||||||| |||  || ||| ||||||| |||||||||||||| |||| ||||||    
T  35901412 aatggttaaggaatctacaaatagaaattttgttttgaaaatgtaagatgttacttttaattaaataatgattgcacaactttttcataaaaacttactt 35901511  T
Q  368 attttggatgtttaatcaataccct 392  Q
     ||||||||| |||| |||||||||    
T  35901512 gttttggatgcttaaccaataccct 35901536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 18200677 - 18200791
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| | ||||| |||||||||||||||||||| |||||||| |||||| |||  || ||  ||||||||||||| |||||||| |||  ||||||    
T  18200677 aatggttaagaaatctacaaataaaaattttgtcttaaaaatataacatgttacttttgattaagtaatgattacacaattttttcataaaagcttactt 18200776  T
Q  368 attttggatgtttaa 382  Q
    |||||||||| ||||    
T  18200777 attttggatgcttaa 18200791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 417
Target Start/End: Original strand, 18647474 - 18647606
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatc 384  Q
    |||||| ||||||| ||||| |||||||||||||||||||  || |||  |||||||||||| ||||||||| |||||||||| ||||  ||| |||| |    
T  18647474 caaatagaaattttatcttaaaaatataagatgttatttt-gataaaatgatgattacacaattttttcatggaaatttacttgttttaaatgcttaacc 18647572  T
Q  385 aataccc-tagaacactagttagcattctcctac 417  Q
    | ||||| ||  ||||||||||||||||||||||    
T  18647573 attacccttacgacactagttagcattctcctac 18647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 416
Target Start/End: Complemental strand, 31331123 - 31330968
Alignment:
Q  263 aaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaacttt-ttcatgaaaat 361  Q
    |||||| || ||| ||| ||| |||||| ||||||| |||| |||||||||||||||| |||  |||||||| ||||||||||||||| || | ||| ||    
T  31331123 aaagcattgcttaaggattctacaaatagaaattttatcttcgaaatataagatgttacttttgatcaaacagtgattacacaactttctttaagaacat 31331024  T
Q  362 ttacttattttggatgtttaatcaat-accctagaacactagttagcattctccta 416  Q
    || ||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||||    
T  31331023 ttgcttgttttggatgcttaaccaatgtccttagaacactggttaacattctccta 31330968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 372
Target Start/End: Original strand, 6270144 - 6270249
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    ||||| |||| ||||||| ||| ||||||||||||||| |||||||||| |||||||||  || ||  ||||||||||||||||||| ||||||| ||||    
T  6270144 gcaatagttaaggaatctacaattaaaaattttgtcttggaaatataaggtgttatttt-gataaagtaatgattacacaacttttttatgaaaacttac 6270242  T
Q  366 ttatttt 372  Q
    || ||||    
T  6270243 ttgtttt 6270249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 388
Target Start/End: Complemental strand, 13873816 - 13873694
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||| ||| |||||||  |||||||| ||||||||||||||||||||||||||||||  || ||  ||||||| || || |||||||| |||| |||     
T  13873816 gcaatgattaaggaatctataaataaaatttttgtcttagaaatataagatgttatttttaattaagtaatgattgcataattttttcataaaaacttaa 13873717  T
Q  366 ttattttggatgtttaatcaata 388  Q
    || ||||| |||||||| |||||    
T  13873716 ttgttttgaatgtttaaccaata 13873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 287 - 376
Target Start/End: Original strand, 42361529 - 42361618
Alignment:
Q  287 aataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggat 376  Q
    |||| |||||||||||| ||||||||||||||| |||| ||| ||  || |||| ||||||||||||||||||| |||||| ||||||||    
T  42361529 aatagaaattttgtctttgaaatataagatgttcttttttataaagtaaagattgcacaactttttcatgaaaacttacttgttttggat 42361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 600491 - 600375
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||| ||| ||||||| ||||||||  ||||| ||| |||||||||||||||| |||  || ||  ||||||| ||||||||||||||||||| |||     
T  600491 gcaatgattaaggaatctacaaataaattttttggcttggaaatataagatgttacttttgataaagtaatgattgcacaactttttcatgaaaacttat 600392  T
Q  366 ttattttggatgtttaa 382  Q
    || |||| |||||||||    
T  600391 ttgttttagatgtttaa 600375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 23425277 - 23425382
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagat----gttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgttta 381  Q
    ||||||||||||||||| | |||||||||||    ||||||||  |||||| |||||||||||||||||||||| ||||  ||||| ||||||||  |||    
T  23425277 aaataaaaattttgtctcaaaaatataagataaatgttatttttgatcaaataatgattacacaactttttcattaaaacgtacttgttttggatactta 23425376  T
Q  382 atcaat 387  Q
    ||||||    
T  23425377 atcaat 23425382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 267 - 377
Target Start/End: Original strand, 27506943 - 27507051
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    |||||||||  |||||| ||||||||||||  || || |||||||||||| ||| |||  || ||| ||| |||||||||||||||||||||||||||||    
T  27506943 caatggttaaagaatctacaaataaaaatt--gttttggaaatataagatattacttttgataaaataataattacacaactttttcatgaaaatttact 27507040  T
Q  367 tattttggatg 377  Q
    | |||| ||||    
T  27507041 tgttttagatg 27507051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 278 - 416
Target Start/End: Complemental strand, 43917694 - 43917555
Alignment:
Q  278 gaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatg 377  Q
    |||||| ||||||||| |||||||||  |||||||||  |||| |||  |||||| ||| ||||||||| ||||| || ||||||||||| |||||||||    
T  43917694 gaatctacaaataaaatttttgtcttgaaaatataaggcgttacttttaatcaaataataattacacaatttttttataaaaatttacttgttttggatg 43917595  T
Q  378 tttaatcaata-ccctagaacactagttagcattctccta 416  Q
     |||| ||||| || ||   |||| |||||||||||||||    
T  43917594 cttaaccaatatccttaatgcactggttagcattctccta 43917555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 372
Target Start/End: Original strand, 3347506 - 3347610
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| | ||||| |||||||||||||||||||  ||||||||||||||| |||  || ||  ||| |||||||||| ||||||| |||||||||     
T  3347506 caatggttaagaaatctacaaataaaaattttgtcttgaaaatataagatgttacttttaataaagtaataattacacaac-ttttcataaaaatttaca 3347604  T
Q  367 tatttt 372  Q
    ||||||    
T  3347605 tatttt 3347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 20542502 - 20542380
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttat 369  Q
    |||||| ||||||| |||||| |||||| ||||| |||||||||||||||| |||  || ||  ||||||||||||  |||||| | |||| |||||  |    
T  20542502 tggttaaggaatctacaaatagaaatttcgtcttggaaatataagatgttacttttgattaagtaatgattacacacttttttcttaaaaacttactcgt 20542403  T
Q  370 tttggatgtttaatcaataccct 392  Q
    |||||||| |||| |||| ||||    
T  20542402 tttggatgcttaaccaatgccct 20542380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 17720212 - 17720283
Alignment:
Q  306 aaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatg 377  Q
    |||||||||||||||||||  ||||   ||||||||||||||||||||||||||| ||  || |||||||||    
T  17720212 aaatataagatgttatttttgatcatgtaatgattacacaactttttcatgaaaacttgtttgttttggatg 17720283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 352
Target Start/End: Original strand, 2768559 - 2768641
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaacttttt 352  Q
    |||||| ||| ||| ||||||||||||||||||| ||||||||| |||||| |||  || ||| ||||||| ||||| |||||    
T  2768559 tggttaaggattctacaaataaaaattttgtcttggaaatataaaatgttagttttaattaaataatgattgcacaatttttt 2768641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 23725687 - 23725745
Alignment:
Q  334 aatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccct 392  Q
    |||||| |||||||||||||||||||| |||||| ||||||||| |||| |||| ||||    
T  23725687 aatgatcacacaactttttcatgaaaacttacttgttttggatgcttaaccaatgccct 23725745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 382
Target Start/End: Complemental strand, 40489985 - 40489853
Alignment:
Q  249 taaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaact 348  Q
    |||||||||| ||||  |||||||||| ||||||| ||| ||||||||||| |||  |||||||| |||||| | |  || ||  |||||||||| ||||    
T  40489985 taaccagtgcttttagggcaatggttaaggaatctacaa-taaaaattttgccttgtaaatataaaatgttactattgataaagtaatgattacataact 40489887  T
Q  349 ttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||| |||| ||| || |||| ||| |||||    
T  40489886 ttttcataaaaacttatttgttttagatatttaa 40489853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 377
Target Start/End: Complemental strand, 3137499 - 3137408
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatg 377  Q
    ||||| ||||||||||||  |||| |||||||||| |||  |||||  ||| ||||||||||||||||||  ||| ||| || |||||||||    
T  3137499 aaatagaaattttgtcttgaaaatgtaagatgttacttttgatcaagtaattattacacaactttttcatataaacttatttgttttggatg 3137408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 547166 - 547060
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagat----gttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgttt 380  Q
    |||||| ||||||| ||||  |||||||||||    ||||||||  |||||| ||| |||||||||||||||||| ||||  ||||| |||| |||  ||    
T  547166 caaatagaaattttatcttgaaaatataagataaatgttatttttgatcaaataataattacacaactttttcattaaaacgtacttgttttagatactt 547067  T
Q  381 aatcaat 387  Q
    |||||||    
T  547066 aatcaat 547060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 33621474 - 33621438
Alignment:
Q  277 ggaatcttcaaataaaaattttgtcttagaaatataa 313  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  33621474 ggaatctacaaataaaaattttgtcttaaaaatataa 33621438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 266 - 392
Target Start/End: Complemental strand, 27284191 - 27284065
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||||||| ||||||| || ||| |||||||||||| |||||||||||||||| |||  |||||| ||||||| ||||||||||| || |||| |||     
T  27284191 gcaatggttaaggaatctacatatagaaattttgtcttggaaatataagatgttacttttgatcaaataatgattgcacaacttttttataaaaacttat 27284092  T
Q  366 ttattttggatgtttaatcaataccct 392  Q
    ||||||||||||||||| |||| ||||    
T  27284091 ttattttggatgtttaaccaatgccct 27284065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 381
Target Start/End: Complemental strand, 22019748 - 22019607
Alignment:
Q  240 gagttttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgat 339  Q
    ||||||||||||||||||  ||||    | |||||| |||||||  |||| |||||||||||||  ||||||||||||||||||||||| ||  ||||||    
T  22019748 gagttttgttaaccagtgtttttaggatattggttaaggaatctataaatgaaaattttgtctttaaaatataagatgttattttctattaagtaatgat 22019649  T
Q  340 tacacaactttttcatgaaaatttacttattttggatgttta 381  Q
    |||||||||||||| |||||| |||||| ||||| |||||||    
T  22019648 tacacaactttttcttgaaaacttacttgttttgaatgttta 22019607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 12076424 - 12076544
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||| |||  ||||| ||||||| |||||| ||||| |||| || ||||||    
T  12076424 aatggttaaggaatcttcaaataaaaattttgtcttgaaaatataagatgttaattttgatcaagcaatgatcacacaattttttgatgagaacttactt 12076523  T
Q  368 attttggatgtttaatcaata 388  Q
     |||| ||||||||| |||||    
T  12076524 gttttagatgtttaaccaata 12076544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 387
Target Start/End: Complemental strand, 20775189 - 20775070
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    ||||||||  ||||||  ||||||||| ||||||||||||||||||||| |||||||  |||||| ||| |||||| ||||||||||| |||| ||||||    
T  20775189 aatggttaatgaatctataaataaaaaatttgtcttagaaatataagatattatttttgatcaaataattattacataactttttcataaaaacttactt 20775090  T
Q  368 attttggatgtttaatcaat 387  Q
     ||||||||| |||| ||||    
T  20775089 gttttggatgcttaaccaat 20775070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 266 - 414
Target Start/End: Complemental strand, 13967964 - 13967814
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcat-gaaaattta 364  Q
    ||||| |||| ||||||| |||||| |||||||||||| | |||||||||||||||||| ||||||  |||||||| |||||||||||||  |||| |||    
T  13967964 gcaatagttaaggaatctacaaatagaaattttgtcttggtaatataagatgttattttttatcaagtaatgattatacaactttttcataaaaaaatta 13967865  T
Q  365 cttattttggatgtttaatcaataccct-agaacactagttagcattctcc 414  Q
    | | |||||||||||||| || |||| | ||  |||| |||||||||||||    
T  13967864 catgttttggatgtttaaccattaccatgagggcactggttagcattctcc 13967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 267 - 387
Target Start/End: Original strand, 16341097 - 16341217
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| ||||| | ||||||||| ||||||||| ||||||||| |||||| |||  || ||  |||||||||| || |||||||| |||||||| |    
T  16341097 caatggttaaggaatttacaaataaaatttttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatt 16341196  T
Q  367 tattttggatgtttaatcaat 387  Q
    |||||||||||||||| ||||    
T  16341197 tattttggatgtttaaccaat 16341217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 12095077 - 12094961
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    ||||| |||| ||||||| |||||| ||||||||  ||  ||||||||||| ||| |||  || ||  |||||||||||||||||||||| |||| ||||    
T  12095077 gcaatagttaaggaatctacaaatagaaattttgcattgaaaatataagatattacttttgataaagtaatgattacacaactttttcataaaaacttac 12094978  T
Q  366 ttattttggatgtttaa 382  Q
    |||||||||||||||||    
T  12094977 ttattttggatgtttaa 12094961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 389
Target Start/End: Complemental strand, 27133667 - 27133545
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| ||||||  |||||| ||| |||||||| |||||||||||| |||||||   ||||  |||||||| ||||||||||||| |||| ||||     
T  27133667 caatggttaaggaatcaccaaatagaaagtttgtctttgaaatataagatattatttttgttcaagtaatgattatacaactttttcataaaaacttacc 27133568  T
Q  367 tattttggatgtttaatcaatac 389  Q
    |||||| |||| |||| ||||||    
T  27133567 tattttagatgcttaaccaatac 27133545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 382
Target Start/End: Original strand, 31991452 - 31991568
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||||||| ||||||  ||| |||||||||||  ||  |||||||||||||||||||  || ||  ||| ||||||| | ||||||||||||||||||    
T  31991452 gcaatggttaaggaatccacaattaaaaattttgctttgaaaatataagatgttatttttgataaagtaataattacacgattttttcatgaaaatttac 31991551  T
Q  366 ttattttggatgtttaa 382  Q
    |||||||  ||||||||    
T  31991552 ttattttatatgtttaa 31991568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 392
Target Start/End: Original strand, 2824814 - 2824936
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttat 369  Q
    |||||| ||| ||| ||||||  | ||||||||| | |||||||||||||| |||  |||||  |||||||||||||| ||||||| |||| || ||| |    
T  2824814 tggttaaggattctacaaatagcacttttgtcttgggaatataagatgttacttttgatcaagtaatgattacacaacattttcataaaaacttgcttgt 2824913  T
Q  370 tttggatgtttaatcaataccct 392  Q
    ||| |||| ||||||||| ||||    
T  2824914 tttagatgcttaatcaatgccct 2824936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 413
Target Start/End: Complemental strand, 19480616 - 19480508
Alignment:
Q  306 aaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccctaga-acactagtt 404  Q
    ||||||||||||||| |||  || ||  |||||||||||||||||||||| |||| |||||| ||||  ||  |||||||||||||| ||  || |||||    
T  19480616 aaatataagatgttacttttgataaagtaatgattacacaactttttcataaaaacttacttgttttaaattcttaatcaatacccttgaggcattagtt 19480517  T
Q  405 agcattctc 413  Q
    |||||||||    
T  19480516 agcattctc 19480508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 28176892 - 28176801
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaa 360  Q
    |||||||| | ||| | |||||| ||||||| ||||||||||||||||| |||||||  || ||| |||||||||||| ||||||||| ||||    
T  28176892 aatggttaagaaatttacaaatagaaattttatcttagaaatataagatattatttt-gataaaataatgattacacatctttttcattaaaa 28176801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 7437842 - 7437947
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatc 384  Q
    |||||||||| | |||||| |||||||||||||||| |||  | |||   ||||||||||||||||||| | |||| ||  |||||||| ||| |||| |    
T  7437842 caaataaaaaatgtgtcttggaaatataagatgttacttttgaacaagtcatgattacacaactttttcgtaaaaacttgtttattttgaatgcttaacc 7437941  T
Q  385 aatacc 390  Q
    ||||||    
T  7437942 aatacc 7437947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 22611904 - 22611977
Alignment:
Q  279 aatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaacttttt 352  Q
    ||||| |||||| ||||||||||||| ||||||||||||||| |||| || ||  ||||||||| ||| |||||    
T  22611904 aatctacaaatataaattttgtcttaaaaatataagatgttactttcgataaagtaatgattactcaatttttt 22611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 31861444 - 31861513
Alignment:
Q  288 ataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatga 357  Q
    ||||||||||| | || |||||||||||||||| |||  |||||  ||||||||||||| ||||||||||    
T  31861444 ataaaaattttattttggaaatataagatgttacttttgatcaagtaatgattacacaaatttttcatga 31861513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 21755974 - 21755875
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttc--atgaaaatttacttattttggatgtttaat 383  Q
    ||||| |||||||||||   |||||||| || ||||||| ||| ||| ||||||||||| | |||||   |||||||||||||| ||||| |||||||||    
T  21755974 aaatagaaattttgtctcgaaaatataaaatattattttttattaaataatgattacaccattttttttaatgaaaatttacttgttttgcatgtttaat 21755875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 366
Target Start/End: Original strand, 31089779 - 31089878
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||| ||| ||||||| | |||| |||||||||||  ||||||||| |||||| |||  || ||  |||||||||||||||||||||| |||| ||||    
T  31089779 gcaatgattaaggaatctaccaatagaaattttgtctaggaaatataa-atgttacttttgataaagtaatgattacacaactttttcataaaaacttac 31089877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 372
Target Start/End: Original strand, 55126783 - 55126879
Alignment:
Q  277 ggaatcttcaaataaaaattttgtcttagaaatataagatgttattttct-atcaaacaatgattacacaactttttcatgaaaatttacttatttt 372  Q
    ||||||| ||||||||  |||||| ||  |||||||| |||||| ||| | || ||| |||||||||||||||||||||| |||| ||| |||||||    
T  55126783 ggaatctacaaataaattttttgttttgaaaatataaaatgttactttttgataaaataatgattacacaactttttcataaaaacttatttatttt 55126879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 31089510 - 31089564
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgtta 320  Q
    |||||| ||| |||||||  ||||||||||||||||| | |||||||||||||||    
T  31089510 gcaatgattaaggaatctataaataaaaattttgtctaaaaaatataagatgtta 31089564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 392
Target Start/End: Original strand, 39810737 - 39810822
Alignment:
Q  306 aaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccct 392  Q
    ||||||||||||||| |||  |||||  ||| ||||||||| ||| |||||||||  || || |||||||||||||| |||||||||    
T  39810737 aaatataagatgttacttttgatcaagtaataattacacaa-tttatcatgaaaacatatttgttttggatgtttaaccaataccct 39810822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 52837333 - 52837387
Alignment:
Q  338 attacacaactttttcatgaaaatttacttattttggatgtttaatcaataccct 392  Q
    |||||||||||||||||| ||||||| ||| ||||||||| |||| |||| ||||    
T  52837333 attacacaactttttcataaaaattttcttgttttggatgcttaaccaatgccct 52837387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 37183137 - 37183077
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaa 346  Q
    |||||||||| || ||||| |||||||| ||||||||||  |||||  |||||||||||||    
T  37183137 aaataaaaatcttatcttataaatataatatgttatttttgatcaagtaatgattacacaa 37183077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 30941466 - 30941584
Alignment:
Q  269 atggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactta 368  Q
    ||||||| |||||||||||||| |  ||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||     
T  30941466 atggttaaggaatcttcaaatacattttttgtcttggaaatataacatgttattttttatcaaacaataattacacaactttttcatgtaaacttacttg 30941565  T
Q  369 ttttggatgtttaatcaat 387  Q
    || |||||| |||| ||||    
T  30941566 ttctggatgcttaaccaat 30941584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 267 - 416
Target Start/End: Original strand, 33148126 - 33148275
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| ||||| | |||||  ||||||||||||| |||||||||||| || |||  |||||  ||||||||||||| |||||||| |||| |||||    
T  33148126 caatggttaaggaatatacaaattgaaattttgtcttaaaaatataagatgctacttttgatcaagtaatgattacacaattttttcataaaaacttact 33148225  T
Q  367 tattttggatgtttaatcaataccctagaacactagttagcattctccta 416  Q
    | ||||| ||||||||  ||| |||| || || |||||||||||||||||    
T  33148226 tgttttgaatgtttaacaaatgcccttgagcattagttagcattctccta 33148275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 26829611 - 26829495
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||||||| | ||| | ||| || |||||||||||| |||||||||||||||| |||  || ||  ||||||||||||||||||||||||||||||||    
T  26829611 gcaatggttaagaaatttacaattagaaattttgtcttggaaatataagatgttacttttgataaagtaatgattacacaactttttcatgaaaatttac 26829512  T
Q  366 ttattttggatgtttaa 382  Q
    ||||||| |||| ||||    
T  26829511 ttattttagatgcttaa 26829495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 242 - 382
Target Start/End: Original strand, 8001717 - 8001857
Alignment:
Q  242 gttttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgatta 341  Q
    |||||| ||||||||||| | |  |||||||||| |||||||  ||||| ||||||| ||||  ||||||||||||||| |||  || ||  ||||||||    
T  8001717 gttttgctaaccagtgccctcagggcaatggttaaggaatctagaaatagaaattttatcttgaaaatataagatgttacttttgataaagtaatgatta 8001816  T
Q  342 cacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    |||||||||| ||||||||||||||| |||| |||| ||||    
T  8001817 cacaacttttacatgaaaatttacttgttttagatgcttaa 8001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 48580004 - 48579929
Alignment:
Q  277 ggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaacttttt 352  Q
    ||||||| | |||| ||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  48580004 ggaatctactaatagaaattttgtcttagaaatataagatgtaatttttaatcaaataatgattacacaacttttt 48579929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 392
Target Start/End: Original strand, 46295865 - 46295991
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||||||| ||||||| |||||||||||||| ||||  |||||||| |||||| |||  |||||  ||| || ||||||||||||||| |||| |||     
T  46295865 gcaatggttaaggaatctacaaataaaaattttatcttgaaaatataaaatgttacttttgatcaagtaatcatgacacaactttttcataaaaacttat 46295964  T
Q  366 ttattttggatgtttaatcaataccct 392  Q
    || ||||||||| ||||  ||||||||    
T  46295965 ttgttttggatgcttaacaaataccct 46295991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 11449206 - 11449073
Alignment:
Q  239 tgagttttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatga 338  Q
    ||||| ||||||| ||||||||| |  | ||||||||  |||||| |||||||||| ||||||||| |||||||| |||||| |||  ||||   ||| |    
T  11449206 tgagtcttgttaatcagtgccttcacggaaatggttaaagaatctacaaataaaaaatttgtcttaaaaatataatatgttaattttgatcatgtaataa 11449107  T
Q  339 ttacacaactttttcatgaaaatttacttatttt 372  Q
    ||||| ||||||||||| |||| |||||||||||    
T  11449106 ttacataactttttcataaaaacttacttatttt 11449073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 30109333 - 30109224
Alignment:
Q  279 aatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattaca-caactttttcatgaaaatttacttattttggatg 377  Q
    ||||| |||||| ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||  |  ||||| || |||| |||||| |||||||||    
T  30109333 aatctccaaatagaaattttgttttgaaaatataatatgttattttttatcaaacaatgattacatgattttttttattaaaacttacttgttttggatg 30109234  T
Q  378 tttaatcaat 387  Q
    ||||||||||    
T  30109233 tttaatcaat 30109224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 10226467 - 10226555
Alignment:
Q  277 ggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    ||||||| |||||| ||||||||||||  ||||||||||||||| |||  || ||  ||||||||||||||||||||||||||| ||||    
T  10226467 ggaatctacaaatagaaattttgtcttgaaaatataagatgttaattttgataaagtaatgattacacaactttttcatgaaaacttac 10226555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 5069614 - 5069500
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    |||||||||  |||||| || ||||||||||||||||  ||||||||||| |||||||  || ||  |||||||||| |||||||| ||||||| ||| |    
T  5069614 caatggttaaagaatctacatataaaaattttgtcttgtaaatataagatattatttttgataaagtaatgattacataacttttt-atgaaaacttatt 5069516  T
Q  367 tattttggatgtttaa 382  Q
    |||||| |||| ||||    
T  5069515 tattttagatgcttaa 5069500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 17169283 - 17169390
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatc 384  Q
    ||||||||||| |||||||  |||||||||||||||||||  || ||  ||| |||| |||||||||||||||||| ||| || |||| |||| |||| |    
T  17169283 caaataaaaatattgtcttgaaaatataagatgttatttttgataaagtaattattatacaactttttcatgaaaacttatttgttttagatgcttaacc 17169382  T
Q  385 aataccct 392  Q
    | ||||||    
T  17169383 attaccct 17169390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 372
Target Start/End: Complemental strand, 27688619 - 27688492
Alignment:
Q  245 ttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacac 344  Q
    ||||||||||||| | | || | ||| |||| ||||||| ||||| |||||||| | ||  ||||||||||||||| |||  || ||  |||||||||||    
T  27688619 ttgttaaccagtgtcatcaaggaaattgttaaggaatctacaaattaaaattttatattgaaaatataagatgttacttttgataaagtaatgattacac 27688520  T
Q  345 aactttttcatgaaaatttacttatttt 372  Q
    || ||||||||||||| |||||| ||||    
T  27688519 aagtttttcatgaaaacttacttgtttt 27688492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 389
Target Start/End: Original strand, 13969094 - 13969216
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    |||| |||| ||||||| |||||| ||||||||||||  |||||||| |||||| |||  || ||  ||| ||||||||| |||||||| |||| |||||    
T  13969094 caatagttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaaacttact 13969193  T
Q  367 tattttggatgtttaatcaatac 389  Q
    | |||||| || |||| ||||||    
T  13969194 tgttttggttgcttaaccaatac 13969216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 376
Target Start/End: Original strand, 50015771 - 50015879
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||| ||| |||||||  |||||  |||||||||||| ||||||| ||| ||| |||  ||||| ||| ||||| ||||||||||||| |||||||| ||    
T  50015771 aatgattaaggaatctcaaaataggaattttgtcttaaaaatatatgatattacttttgatcaagcaacgattatacaactttttcataaaaatttattt 50015870  T
Q  368 attttggat 376  Q
     ||||||||    
T  50015871 gttttggat 50015879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 34347572 - 34347623
Alignment:
Q  334 aatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    |||||||||||||||||||||| || |||||||| ||||||||| |||||||    
T  34347572 aatgattacacaactttttcataaagatttacttgttttggatgcttaatca 34347623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 3529158 - 3529109
Alignment:
Q  338 attacacaactttttcatgaaaatttacttattttggatgtttaatcaat 387  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||| ||||    
T  3529158 attacacaatttttttatgaaaatttacttattttggatgcttaaccaat 3529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 5069802 - 5069701
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    ||||| |||||||||||| |||||||||| ||||| |||  |  ||||||||||||||  | ||| |  |||||| |||||| |||||||||||||| ||    
T  5069802 aaatagaaattttgtcttggaaatataaggtgttacttttgactaaacaatgattacatgattttattgtgaaaacttacttgttttggatgtttaacca 5069703  T
Q  386 at 387  Q
    ||    
T  5069702 at 5069701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 40430877 - 40430824
Alignment:
Q  318 ttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattt 371  Q
    ||||||| || |||| ||||||||||||||||||||||||||| || |||||||    
T  40430877 ttattttttaacaaataatgattacacaactttttcatgaaaacttgcttattt 40430824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 373
Target Start/End: Original strand, 34382610 - 34382733
Alignment:
Q  249 taaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaact 348  Q
    ||||||||||| |||| |||||| ||| | || ||  ||||||||| ||| ||||| ||||||||| | | |||||  || ||||||| |||||||||||    
T  34382610 taaccagtgcccttaaggcaatgattaagaaaactataaataaaaaatttatcttaaaaatataagttttaatttttgattaaacaataattacacaact 34382709  T
Q  349 ttttcatgaaaatttacttattttg 373  Q
    |||| || |||| |||||| |||||    
T  34382710 tttt-ataaaaagttacttgttttg 34382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 39993496 - 39993446
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatg 317  Q
    ||||||||| | ||||| |||||||||||||||||||  ||||||||||||    
T  39993496 caatggttaagaaatctacaaataaaaattttgtcttgaaaatataagatg 39993446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 763185 - 763233
Alignment:
Q  288 ataaaaattttgtcttagaaatataagatgttattttctatcaaacaat 336  Q
    ||||||||| ||||||||||||||||| | |||||||  ||||||||||    
T  763185 ataaaaattatgtcttagaaatataagtttttatttttaatcaaacaat 763233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 38597531 - 38597446
Alignment:
Q  334 aatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccc----tagaacactagttagcattctcct 415  Q
    |||||||| |||||||||| || |||| |||||| ||||||||  |||| |||| |||    ||| ||||||||||||||||||||    
T  38597531 aatgattagacaacttttttattaaaacttacttgttttggatacttaaccaatgcccctactagtacactagttagcattctcct 38597446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 38359166 - 38359050
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||||||||| |||  || ||  || |||||| || |||||||||||||| ||||    
T  38359166 gcaatggttaaggaatctataaataaaaattttatcttagaaatataagatgttaattttgataaagtaacgattacccatctttttcatgaaaacttac 38359067  T
Q  366 ttattttggatgtttaa 382  Q
    ||||||| |||||||||    
T  38359066 ttattttagatgtttaa 38359050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 249 - 382
Target Start/End: Complemental strand, 50958996 - 50958863
Alignment:
Q  249 taaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaact 348  Q
    ||||||||| | |||  |||||| |||  |||| |||||||| |||||||||||| ||||||||| ||||||||||  |||||  ||||||||||||| |    
T  50958996 taaccagtgtccttagggcaatgattaaagaattttcaaatagaaattttgtcttggaaatataacatgttatttttgatcaagaaatgattacacaatt 50958897  T
Q  349 ttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||| |||| |||||| ||||||||| ||||    
T  50958896 ttttcataaaaacttacttgttttggatgcttaa 50958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 286 - 415
Target Start/End: Complemental strand, 48338912 - 48338782
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    ||||| ||||||| |||| ||||||||||||||||||||  || ||  ||| ||||||||||||||| || |||| |||||| ||||||||| |||| ||    
T  48338912 aaatagaaattttatcttggaaatataagatgttatttttgataaagtaattattacacaacttttttataaaaacttacttgttttggatgcttaacca 48338813  T
Q  386 ataccc-tagaacactagttagcattctcct 415  Q
     | ||| |||| |||||||||||||||||||    
T  48338812 ttgcccttagagcactagttagcattctcct 48338782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 391
Target Start/End: Complemental strand, 53818932 - 53818820
Alignment:
Q  278 gaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatg 377  Q
    |||||| |||||||||||||||| || || |||||| || |||||||  |||||  |||||||| ||||||||||||| |||| ||| ||||||||||||    
T  53818932 gaatctacaaataaaaattttgttttggagatataaaat-ttatttttaatcaagtaatgattatacaactttttcattaaaacttatttattttggatg 53818834  T
Q  378 tttaatcaataccc 391  Q
     |||||||||||||    
T  53818833 cttaatcaataccc 53818820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 278 - 382
Target Start/End: Complemental strand, 55446839 - 55446736
Alignment:
Q  278 gaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatg 377  Q
    |||||| ||||||||||||||||||| |||||||||||||||| |||  || ||  ||||||||||||||||||| || |||| |||||| |||| ||||    
T  55446839 gaatctacaaataaaaattttgtcttggaaatataagatgttacttttaataaagtaatgattacacaacttttt-ataaaaacttacttcttttagatg 55446741  T
Q  378 tttaa 382  Q
    |||||    
T  55446740 tttaa 55446736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 44698335 - 44698189
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| | ||||| |||||| ||||||||||||  ||||||||||||||| |||  || ||| ||||||||||||| |||||||| |||| ||| ||    
T  44698335 aatggttaagaaatctacaaatagaaattttgtcttgaaaatataagatgttacttttgataaaataatgattacacaattttttcataaaaacttattt 44698236  T
Q  368 attttggatgtttaatcaataccctag-aacactagttagcattctc 413  Q
     |||| ||| ||||| || | | | || |||||||||||||||||||    
T  44698235 gttttagatatttaaccattgctccagaaacactagttagcattctc 44698189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 29032505 - 29032408
Alignment:
Q  292 aaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaatac 389  Q
    ||||||||||||| ||||||||||||||| |||  |||||  |||||||||||||||||||||| |||| || ||| |||| |||  |||||||||||    
T  29032505 aaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacacaactttttcataaaaacttgcttgttttagatacttaatcaatac 29032408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 297 - 382
Target Start/End: Original strand, 31494030 - 31494115
Alignment:
Q  297 ttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||| ||||||||||| |||| |||  |||||| ||||||||||||| |||||||| |||| |||||| ||||||||||||||    
T  31494030 ttgtcttggaaatataagaagttaattttaatcaaataatgattacacaattttttcataaaaacttacttgttttggatgtttaa 31494115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 392
Target Start/End: Original strand, 6785771 - 6785915
Alignment:
Q  249 taaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaac- 347  Q
    ||||||||||| | |  |||||||||| ||| ||| |||||| || |||||||||  |||||||| |||||| |||  |||||  |||||||||||| |     
T  6785771 taaccagtgccctcagggcaatggttaaggattctacaaatagaatttttgtcttgaaaatataaaatgttacttttgatcaagtaatgattacacatct 6785870  T
Q  348 tttttcatgaaaatttacttattttggatgtttaatcaataccct 392  Q
    ||||||||||||| || ||| |||| ||||||||| |||||||||    
T  6785871 tttttcatgaaaacttgcttgtttttgatgtttaaccaataccct 6785915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 400
Target Start/End: Original strand, 11676741 - 11676865
Alignment:
Q  277 ggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggat 376  Q
    ||||||| |||||| ||||||||||||  ||||| |||| |||| |||  |||||| |||||| |||||| |||||| |||||| || ||| ||||||||    
T  11676741 ggaatctacaaatataaattttgtcttgaaaataaaagacgttacttttgatcaaataatgataacacaattttttcttgaaaacttgcttgttttggat 11676840  T
Q  377 gtttaatcaataccc-tagaacact 400  Q
    |||||| |||| ||| |||||||||    
T  11676841 gtttaaccaatgcccttagaacact 11676865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 399
Target Start/End: Original strand, 28709560 - 28709693
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttac 365  Q
    ||||||||||  ||||||  ||||| ||||||| ||||  |||||||| |||||| |||  |||||| |||||||| |||||||||| ||  ||| ||||    
T  28709560 gcaatggttaaagaatctataaatagaaattttatcttgaaaatataaaatgttacttttgatcaaataatgattatacaacttttttatagaaacttac 28709659  T
Q  366 ttattttggatgtttaatcaataccctagaacac 399  Q
    |||||||| ||| |||| |||||| || ||||||    
T  28709660 ttattttgaatgcttaaccaatactcttgaacac 28709693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 47334959 - 47334863
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||| ||||||||||||| ||||||||||  ||||||| ||| ||| ||||||||||||||||||  || |||||||| || ||||  ||||||||    
T  47334959 aaatagaaattttgtcttaaaaatataagactttattttttataaaataatgattacacaacttttcaataaaaatttatttgttttaaatgtttaa 47334863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 374
Target Start/End: Complemental strand, 4020216 - 4020109
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| ||||||| |||||| ||||||||||||  |||||||| |||||| |||  || ||  ||| ||||||||| |||||||| |||| |||||    
T  4020216 caatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaaacttact 4020117  T
Q  367 tattttgg 374  Q
    | ||||||    
T  4020116 tgttttgg 4020109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 392
Target Start/End: Original strand, 635700 - 635825
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| ||||||| |||||| ||||||||||||  | | ||||||||||| |||  || ||| ||||||||||||||||||  || |||| |||      
T  635700 caatggttaaggaatctacaaatagaaattttgtcttgaataaataagatgttacttttgattaaataatgattacacaacttttcaataaaaacttata 635799  T
Q  367 tattttggatgtttaatcaataccct 392  Q
    | ||||||||| |||| |||| ||||    
T  635800 tgttttggatgcttaaccaatgccct 635825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 49261880 - 49261783
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    |||||| ||||||||||||  ||||||||||||||| |||  ||  |  ||| ||||||||| |||||||||||||| ||||| ||||||||| ||||    
T  49261880 caaatagaaattttgtcttgtaaatataagatgttacttttgatagagtaataattacacaattttttcatgaaaatgtacttgttttggatgcttaa 49261783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 8326243 - 8326171
Alignment:
Q  279 aatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttt 351  Q
    |||||||||||| ||||||||| ||| |||||||| |||||| |||  ||||| |||||||||||| ||||||    
T  8326243 aatcttcaaatagaaattttgttttaaaaatataatatgttacttttgatcaagcaatgattacaccactttt 8326171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 34145920 - 34146019
Alignment:
Q  287 aataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaa 386  Q
    |||| ||||||||| || ||||||||||||||||||||  |||||  ||| |||| |||| || ||||| ||||||||||  ||||||||| ||||||||    
T  34145920 aatataaattttgtgttggaaatataagatgttatttttgatcaagtaataattatacaatttgttcat-aaaatttactagttttggatgcttaatcaa 34146018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 415
Target Start/End: Original strand, 1711919 - 1712068
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| |||||||  || || ||||||||||||  |||||||||||||||  ||  |  ||  ||| |||| || | |||||  | ||||||||||    
T  1711919 caatggttaaggaatctaaaattataaattttgtcttgaaaatataagatgttacatttgactaagtaataattatactattttttattaaaaatttact 1712018  T
Q  367 tattttggatgtttaatcaataccc-tagaacactagttagcattctcct 415  Q
    |||||| | ||||||| |||||||| ||| ||||| ||||||||||||||    
T  1712019 tattttagttgtttaaccaatacccttagtacactggttagcattctcct 1712068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 4128727 - 4128803
Alignment:
Q  306 aaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||||||| |||||||  || ||  |||||||||||||  |||||||||||| |||||| ||||||||| ||||    
T  4128727 aaatataagatattatttttgataaagtaatgattacacaatattttcatgaaaacttacttgttttggatgcttaa 4128803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 49543305 - 49543174
Alignment:
Q  285 caaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatc 384  Q
    |||||| ||||||| ||||  ||||||||||| | ||||| ||| ||  ||| ||||||||  |||||||||||||||||||  ||||| ||| |||| |    
T  49543305 caaatagaaattttatctttaaaatataagatatcattttatattaagtaattattacacacttttttcatgaaaatttactcgttttgaatgcttaacc 49543206  T
Q  385 aat-accctagaacactagttagcattctcct 415  Q
    |||  || ||| |||||| ||| |||||||||    
T  49543205 aatgtccttaggacactaattaacattctcct 49543174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 25319562 - 25319461
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    ||||||||||||||| ||  |||||||| |||||| |||  |  ||| |||||||||||| ||||| ||| |||| ||| || |||| ||||||||| ||    
T  25319562 aaataaaaattttgtattgaaaatataaaatgttacttttgactaaataatgattacacaccttttacattaaaacttaattgttttagatgtttaacca 25319463  T
Q  386 at 387  Q
    ||    
T  25319462 at 25319461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 31904766 - 31904734
Alignment:
Q  292 aaattttgtcttagaaatataagatgttatttt 324  Q
    ||||||||||||||||||||||||| |||||||    
T  31904766 aaattttgtcttagaaatataagattttatttt 31904734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 6e-23; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 387
Target Start/End: Original strand, 1309720 - 1309839
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| ||||||| |||||| ||||||| ||||| |||||||| | |||| ||| ||||||| ||  ||||||||| |||||||| |||||||| ||    
T  1309720 aatggttaaggaatctacaaatagaaattttatcttaaaaatataatacgttactttttatcaaataactattacacaattttttcataaaaatttattt 1309819  T
Q  368 attttggatgtttaatcaat 387  Q
    ||||||||||||||| ||||    
T  1309820 attttggatgtttaaccaat 1309839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 242 - 372
Target Start/End: Original strand, 8896568 - 8896698
Alignment:
Q  242 gttttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgatta 341  Q
    |||||||||||||||||| | | | ||||| |||  |||||| |||||| ||||||||||||| ||||||||||||||| |||  ||||   ||||||||    
T  8896568 gttttgttaaccagtgccctcacaacaatgtttaaagaatctacaaatataaattttgtcttaaaaatataagatgttacttttgatcaggtaatgatta 8896667  T
Q  342 cacaactttttcatgaaaatttacttatttt 372  Q
    ||||| ||||||||||||| |||||| ||||    
T  8896668 cacaattttttcatgaaaacttacttgtttt 8896698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 279 - 382
Target Start/End: Complemental strand, 43626453 - 43626350
Alignment:
Q  279 aatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgt 378  Q
    |||||||||||||||||||||||||  ||| || |||||||||||| ||| ||  ||| ||||||||| |||||||| |||||||| ||||||| |||||    
T  43626453 aatcttcaaataaaaattttgtcttgaaaaaattagatgttattttttataaagtaataattacacaattttttcataaaaatttatttattttagatgt 43626354  T
Q  379 ttaa 382  Q
    ||||    
T  43626353 ttaa 43626350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 23142660 - 23142797
Alignment:
Q  279 aatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaac-tttttcatgaaaatttacttattttggatg 377  Q
    ||||| |||||| ||||||||| || ||||||||||||||||||||  |||||  ||| |||||||||| |||||||| |||| ||||||||||||||||    
T  23142660 aatctacaaatagaaattttgt-ttggaaatataagatgttatttttgatcaagtaattattacacaacttttttcataaaaacttacttattttggatg 23142758  T
Q  378 tttaatcaataccctaga-acactagttagcattctcct 415  Q
    ||||| |||| | || || ||||| |||| |||||||||    
T  23142759 tttaaccaatgctcttgagacactcgttaacattctcct 23142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 265 - 410
Target Start/End: Complemental strand, 37928420 - 37928274
Alignment:
Q  265 agcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaattta 364  Q
    |||||||||||  ||||||  ||||| ||||||| ||||  |||||||| ||||||||||  || ||  ||| ||||||||||||||| || |||| |||    
T  37928420 agcaatggttaaagaatctataaatataaattttatcttgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaaactta 37928321  T
Q  365 cttattttggatgtttaatcaataccctaga-acactagttagcatt 410  Q
    |||||||||||||||||| ||||  ||| || |||||||||||||||    
T  37928320 cttattttggatgtttaaccaatgtccttgagacactagttagcatt 37928274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 292 - 414
Target Start/End: Complemental strand, 16980035 - 16979912
Alignment:
Q  292 aaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccc 391  Q
    ||||||||||||  ||||||||||||||| |||  ||| |  ||| || ||||||||||||||| ||||||||||| ||||||||| |||| |||| |||    
T  16980035 aaattttgtcttgaaaatataagatgttacttttgatcgagtaataatcacacaactttttcataaaaatttacttgttttggatgcttaaccaatgccc 16979936  T
Q  392 -tagaacactagttagcattctcc 414  Q
     |||| ||| ||||||||||||||    
T  16979935 ttagagcaccagttagcattctcc 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 287 - 388
Target Start/End: Original strand, 31487725 - 31487826
Alignment:
Q  287 aataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaa 386  Q
    |||| ||||||| |||| |||||||||||||||||||| ||| ||  ||| ||||||||| |||||| | |||| ||| ||||||||||||||||| |||    
T  31487725 aatagaaattttatcttggaaatataagatgttattttttattaagtaataattacacaattttttcttaaaaacttatttattttggatgtttaaccaa 31487824  T
Q  387 ta 388  Q
    ||    
T  31487825 ta 31487826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 292 - 385
Target Start/End: Original strand, 34993148 - 34993241
Alignment:
Q  292 aaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    ||||||||||||| ||||||||||||||| |||  || ||| ||| ||||||||||||||||||||||| ||||||  ||| |||| |||||||    
T  34993148 aaattttgtcttaaaaatataagatgttacttttgataaaataataattacacaactttttcatgaaaacttacttgatttagatgcttaatca 34993241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 31850762 - 31850836
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaa 360  Q
    ||||||||||||||||||||||||||||||||||| |||  || ||| |||||||||| || |||||||| ||||    
T  31850762 aaataaaaattttgtcttagaaatataagatgttacttttaataaaataatgattacataattttttcataaaaa 31850836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 8746234 - 8746149
Alignment:
Q  287 aataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttatttt 372  Q
    |||||||||||||||||  |||||||  |||||| |||  |||||| |||||||| ||||||||||||| |||| |||||||||||    
T  8746234 aataaaaattttgtcttgtaaatatagaatgttacttttgatcaaataatgattatacaactttttcataaaaacttacttatttt 8746149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 16685848 - 16685728
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgtta-ttttctatcaaacaatgattacacaacttttt-catgaaaatttactt 367  Q
    |||||| ||||||| | |||| || ||||||||| |||||||||||||||| | ||  |||||  |||||||||||||||||||  || |||| ||||||    
T  16685848 tggttaaggaatctactaatagaagttttgtctttgaaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaacttactt 16685749  T
Q  368 attttggatgtttaatcaata 388  Q
    |||||||||| |||| |||||    
T  16685748 attttggatgcttaaccaata 16685728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 17660084 - 17659964
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgtta-ttttctatcaaacaatgattacacaacttttt-catgaaaatttactt 367  Q
    |||||| ||||||| | |||| || ||||||||| |||||||||||||||| | ||  |||||  |||||||||||||||||||  || |||| ||||||    
T  17660084 tggttaaggaatctactaatagaagttttgtctttgaaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaacttactt 17659985  T
Q  368 attttggatgtttaatcaata 388  Q
    |||||||||| |||| |||||    
T  17659984 attttggatgcttaaccaata 17659964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 308 - 417
Target Start/End: Complemental strand, 30028041 - 30027931
Alignment:
Q  308 atataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatcaataccc-tagaacactagttag 406  Q
    ||||||||||||| |||  || ||  |||||| |||||||||||||||||||  |||||| || ||||||||||| || ||||| ||  ||||| |||||    
T  30028041 atataagatgttacttttgataaagtaatgatcacacaactttttcatgaaatcttacttgttatggatgtttaaccattacccttatgacactggttag 30027942  T
Q  407 cattctcctac 417  Q
    |||||||||||    
T  30027941 cattctcctac 30027931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 245 - 382
Target Start/End: Complemental strand, 43118946 - 43118809
Alignment:
Q  245 ttgttaaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacac 344  Q
    ||||||||| ||||||  |  |||||||||| | ||||| |||||| ||||||||||||  |||||| ||||||||  ||  |||||| | | ||||| |    
T  43118946 ttgttaaccggtgcctccagggcaatggttaagaaatctacaaatataaattttgtcttgaaaatatgagatgttacatttgatcaaatagtaattacgc 43118847  T
Q  345 aactttttcatgaaaatttacttattttggatgtttaa 382  Q
    || |||||||| |||| |||||| ||||||||| ||||    
T  43118846 aattttttcattaaaacttacttgttttggatgattaa 43118809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 34993092 - 34993147
Alignment:
Q  266 gcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttat 321  Q
    |||||||||| ||||||| |||||| ||||||||||||  ||||||||||||||||    
T  34993092 gcaatggttaaggaatctacaaatataaattttgtcttgaaaatataagatgttat 34993147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 1554025 - 1554067
Alignment:
Q  278 gaatcttcaaataaaaattttgtcttagaaatataagatgtta 320  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  1554025 gaatctacaaataaaaatgttgtcttagaaatataagatgtta 1554067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 270 - 414
Target Start/End: Complemental strand, 19677110 - 19676965
Alignment:
Q  270 tggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttat 369  Q
    |||||| ||||||  |||||| ||||||||||||  ||||||||||||||| |||  || ||  |||||||||||| ||||| ||  |||| || ||| |    
T  19677110 tggttaaggaatcgacaaatagaaattttgtcttgaaaatataagatgttacttttgattaagtaatgattacacaccttttacaccaaaacttgcttgt 19677011  T
Q  370 tttggatgtttaatcaataccc-tagaacactagttagcattctcc 414  Q
    || ||||| |||| |||| ||| | |  ||||||||||||||||||    
T  19677010 ttaggatgcttaaccaatgcccttggggcactagttagcattctcc 19676965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 268 - 377
Target Start/End: Original strand, 25530541 - 25530650
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    ||||||||  |||| || ||||| ||||||| |||||||||||||| ||||||  ||  || ||  ||||||||||||| |||||||| |||| ||| ||    
T  25530541 aatggttaaagaatttttaaatagaaattttatcttagaaatataaaatgttacatttgataaagtaatgattacacaattttttcataaaaacttattt 25530640  T
Q  368 attttggatg 377  Q
     |||||||||    
T  25530641 gttttggatg 25530650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 1521261 - 1521311
Alignment:
Q  332 acaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||||||| ||| ||||||||| ||| |||||| ||||||||||||||    
T  1521261 acaatgattacgcaattttttcatggaaacttacttgttttggatgtttaa 1521311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 416
Target Start/End: Original strand, 12810161 - 12810291
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    |||| |||||||||||||| ||||||||||| ||| |||  |  ||  ||| ||||||||||||||||||||||   | ||| |||| ||||||||| ||    
T  12810161 aaatgaaaattttgtcttaaaaatataagatattacttttgacaaagtaataattacacaactttttcatgaaagcatgcttgttttagatgtttaacca 12810260  T
Q  386 ataccctagaacactagttagcattctccta 416  Q
     | |||| | ||||  |||| ||||||||||    
T  12810261 ttgcccttggacaccggttaacattctccta 12810291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 42888420 - 42888306
Alignment:
Q  268 aatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttactt 367  Q
    |||||||| ||||||| ||||||||  ||||  |||  ||||||||||||||  |||  || ||  ||||||| ||||| ||||  ||||||| ||||||    
T  42888420 aatggttaaggaatctacaaataaattttttaacttgaaaatataagatgttgcttttgataaagtaatgattgcacaaattttctatgaaaacttactt 42888321  T
Q  368 attttggatgtttaa 382  Q
    ||||| |||||||||    
T  42888320 attttagatgtttaa 42888306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 22931924 - 22931973
Alignment:
Q  338 attacacaactttttcatgaaaatttacttattttggatgtttaatcaat 387  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  22931924 attacactactttttattgaaaatttacttattttggttgtttaaccaat 22931973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 382
Target Start/End: Complemental strand, 27235349 - 27235256
Alignment:
Q  289 taaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaa 382  Q
    ||||||||||||||| |||||||||  ||||||||| ||  ||| ||||||||||  | ||||   |||||| || ||| ||||||||||||||    
T  27235349 taaaaattttgtcttggaaatataaagtgttattttttactaaataatgattacatcatttttgtgtgaaaactttcttgttttggatgtttaa 27235256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 370
Target Start/End: Original strand, 23080659 - 23080723
Alignment:
Q  306 aaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttatt 370  Q
    ||||||||||||||| |||  |||||  |||||||||| || |||||||| |||||||| |||||    
T  23080659 aaatataagatgttacttttgatcaagtaatgattacataattttttcataaaaatttatttatt 23080723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 267 - 387
Target Start/End: Complemental strand, 51764 - 51644
Alignment:
Q  267 caatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttact 366  Q
    ||||||||| ||||| | ||||||||| ||||||||| ||||||||| |||||| |||  || ||  |||||||||| || |||||||| |||||||| |    
T  51764 caatggttaaggaatttacaaataaaatttttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatt 51665  T
Q  367 tattttggatgtttaatcaat 387  Q
    |||||||||||||||| ||||    
T  51664 tattttggatgtttaaccaat 51644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 249 - 352
Target Start/End: Complemental strand, 36668 - 36565
Alignment:
Q  249 taaccagtgcctttaaagcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaact 348  Q
    ||||| |||||||||| | |||| |||  ||||||||||||||||||||||| ||  ||||||||||||||| |||  || ||| |||||||| ||||||    
T  36668 taaccggtgcctttaaggtaatgattaaagaatcttcaaataaaaattttgttttgaaaatataagatgttacttttgattaaataatgattatacaact 36569  T
Q  349 tttt 352  Q
    ||||    
T  36568 tttt 36565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 265 - 415
Target Start/End: Complemental strand, 120789 - 120638
Alignment:
Q  265 agcaatggttagggaatcttcaaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaattta 364  Q
    ||||||||||| ||||||| |||||| ||||||||||||  ||||||||||||| | |||   | ||  || |||| |||||||||| ||  |||| |||    
T  120789 agcaatggttaaggaatctacaaatagaaattttgtcttgaaaatataagatgtcacttttggtaaagtaacgattgcacaacttttccacaaaaactta 120690  T
Q  365 cttattttggatgtttaatcaata-ccctagaacactagttagcattctcct 415  Q
    |||||||||||||||||| || || || ||||||||| |||| |||| ||||    
T  120689 cttattttggatgtttaaccattatccttagaacactggttaacattgtcct 120638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 15380 - 15485
Alignment:
Q  286 aaataaaaattttgtcttagaaatataagatgttattttctatcaaacaatgattacacaactttttcatgaaaatttacttattttggatgtttaatca 385  Q
    ||||| || |||||||||  ||||||||||||||| |||  | |||  || ||||| |||  |||||||| |||| |||||||||||| |||||||| ||    
T  15380 aaatagaatttttgtcttgaaaatataagatgttacttttgaccaagtaacgattatacacatttttcataaaaacttacttattttgaatgtttaacca 15479  T
Q  386 ataccc 391  Q
    ||||||    
T  15480 ataccc 15485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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