View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1508_high_31 (Length: 234)
Name: NF1508_high_31
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1508_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 7024004 - 7024209
Alignment:
| Q |
13 |
tattctatttgtaatgcaggttgaaatatctaagccttcagtgaagtattgacaaaacggatccaagaaaaaatgtgacatattcgtatatcatgcatct |
112 |
Q |
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| T |
7024004 |
tattctatttgtaatgcaggttgaaatatctaagccttcagtgaagtattgacaaaacggatccaagaaaaaatgtgacatattcgtatatcatgcatct |
7024103 |
T |
|
| Q |
113 |
agcttggttctataagaacnnnnnnnctaatctaatattgttttttactttctatataatatgtactctattgtcgatgaatctgtgctatatggctata |
212 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7024104 |
agcttggttctataagaacaaaaaaactaatctaatattgttttttactttctatataatatgtactctattgtcgatgaatctgtgctatatggctata |
7024203 |
T |
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| Q |
213 |
tgtact |
218 |
Q |
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|||||| |
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| T |
7024204 |
tgtact |
7024209 |
T |
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