View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1508_high_38 (Length: 204)
Name: NF1508_high_38
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1508_high_38 |
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Alignment Details
Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 41066956 - 41067123
Alignment:
| Q |
23 |
aacaaaaatggctgatgtgtaactcttgaaatagttatgatataaaaatcaaactgtaaagatcgtaagaccttaatagaggacaaaactctatttaata |
122 |
Q |
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| T |
41066956 |
aacaaaaatggctgatgtgtaactcttgaaatagttatgatataaaaatcaaactgtaaagaccgtaagaccttaatagaggacaaaactctatttaata |
41067055 |
T |
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| Q |
123 |
ctaatgcattattagtatatgatttgaactttagacctcttgtttaattggaagagattctttaccat |
190 |
Q |
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| T |
41067056 |
ccgatgcattattagtatttgatttgaactttagacctcttgttaaattggaagagattctttaccat |
41067123 |
T |
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