View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1508_high_6 (Length: 528)
Name: NF1508_high_6
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1508_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 479; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 16 - 526
Target Start/End: Original strand, 25145829 - 25146339
Alignment:
| Q |
16 |
ataaggtactctaaccaatgaaaaatggagaacatgtataatttcttagaggagaaaacatgatagagagacgttaaaattttgtattatttggttgaag |
115 |
Q |
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| T |
25145829 |
ataaggtactctaaccaatgaaaaatggagaacatgtataatttcttagaggagaaaacatgatagagagacgttaaaattttgtattatttggttgaag |
25145928 |
T |
|
| Q |
116 |
gttccaaaaagcttgaagctgaaaattgaagcacaaggaaagtatctagccagaattggacaaagtaatcaaatcagaaatataacaagaaaagcttgca |
215 |
Q |
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| T |
25145929 |
gttccaaaaagcttgaagctgaagattgaagcacaaggaaagtatctagccagaattggacaaagtaatcaaatcagaacaattacaagaaaagcttgca |
25146028 |
T |
|
| Q |
216 |
agccttttgtcggtaaagcaacccctttgccctctctttccgaggaatctgaatcctttaaaacacaatccgacgaagaacagcgaacagcgaaaaagaa |
315 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
25146029 |
agccttttgttggtaaagcaacccctttgccctctctttccgaggaatctgaatcctttaaaacacaatccgacgaagaacatcgaacagcgaaaaagaa |
25146128 |
T |
|
| Q |
316 |
aaaggtctcaaatgagaatgtttttcctacaggttttgaactgggatcatccactacctcggaattcagcaaccaaacctggaacctttcttggagtcag |
415 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25146129 |
aaaggtcacaaatgagaatgtttttcctacaggttttgaactgggatcatccactacctcggaattcagcaaccaaacctggaacctttcttggagtcag |
25146228 |
T |
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| Q |
416 |
ctggctgaagcaacctaccaatcacctttggtgcctagtttcttattataggttttgtataattagaataactgtttgccctaataagagagttgatgat |
515 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25146229 |
ctggctgaagcaacctaccaatcacctttggtgcctagtttcttattataggttttgtataattagaataactgtttgccctaataagagagttgatgat |
25146328 |
T |
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| Q |
516 |
gatgtccatct |
526 |
Q |
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| T |
25146329 |
gatgttcatct |
25146339 |
T |
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