View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1508_low_1 (Length: 673)

Name: NF1508_low_1
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1508_low_1
NF1508_low_1
[»] chr4 (10 HSPs)
chr4 (246-673)||(53000918-53001345)
chr4 (1-166)||(53000671-53000836)
chr4 (395-580)||(16442147-16442333)
chr4 (498-634)||(20044164-20044300)
chr4 (385-612)||(30624870-30625102)
chr4 (509-611)||(10576462-10576564)
chr4 (522-651)||(19101052-19101181)
chr4 (492-636)||(24042345-24042489)
chr4 (498-580)||(26159796-26159878)
chr4 (474-610)||(13275712-13275849)
[»] chr2 (9 HSPs)
chr2 (4-65)||(31603803-31603864)
chr2 (474-651)||(31449925-31450104)
chr2 (465-636)||(32703893-32704065)
chr2 (547-611)||(17152162-17152226)
chr2 (105-168)||(31603956-31604019)
chr2 (547-633)||(18116970-18117056)
chr2 (545-635)||(21844669-21844759)
chr2 (541-611)||(17415231-17415301)
chr2 (573-610)||(4451634-4451671)
[»] chr7 (6 HSPs)
chr7 (391-580)||(10253625-10253815)
chr7 (492-609)||(2351008-2351125)
chr7 (499-612)||(1074460-1074573)
chr7 (517-567)||(28951956-28952006)
chr7 (332-421)||(25706353-25706442)
chr7 (395-443)||(29544697-29544745)
[»] chr5 (4 HSPs)
chr5 (538-635)||(24846246-24846343)
chr5 (498-611)||(20694649-20694762)
chr5 (531-611)||(4325383-4325463)
chr5 (562-610)||(25662237-25662285)
[»] chr3 (5 HSPs)
chr3 (511-611)||(26775064-26775163)
chr3 (339-608)||(21813498-21813769)
chr3 (517-611)||(21829144-21829238)
chr3 (499-579)||(11474887-11474967)
chr3 (547-635)||(8402592-8402680)
[»] chr1 (5 HSPs)
chr1 (374-443)||(26102234-26102303)
chr1 (347-443)||(31313729-31313825)
chr1 (547-635)||(34381693-34381781)
chr1 (385-651)||(15416852-15417120)
chr1 (339-443)||(34935169-34935272)
[»] chr8 (8 HSPs)
chr8 (334-574)||(5153804-5154044)
chr8 (1-65)||(12521008-12521072)
chr8 (498-651)||(31436447-31436601)
chr8 (541-637)||(12774879-12774975)
chr8 (517-631)||(13530117-13530231)
chr8 (517-631)||(13619656-13619770)
chr8 (517-591)||(41505549-41505623)
chr8 (547-603)||(30851141-30851197)
[»] chr6 (6 HSPs)
chr6 (334-443)||(16439635-16439744)
chr6 (498-557)||(23419101-23419160)
chr6 (352-431)||(32930292-32930370)
chr6 (348-444)||(23418952-23419048)
chr6 (547-635)||(26512819-26512907)
chr6 (547-635)||(26517935-26518023)


Alignment Details
Target: chr4 (Bit Score: 400; Significance: 0; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 246 - 673
Target Start/End: Original strand, 53000918 - 53001345
Alignment:
Q  246 taagacttatcagccatgcacttgtgcattttcagtatgtgtaggagagcttttgaaagacatgggggcaaattatgcatttttccgtccttcttcgagt 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53000918 taagacttatcagccatgcacttgtgcattttcagtatgtgtaggagagcttttgaaagacatgggggcaaattatgcatttttccgtccttcttcgagt 53001017  T
Q  346 attcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccattcttcaat 445  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53001018 attcttccatcttaaaatgtcttagaatttgagattaatttttctcaactagtattgtcttcaaaagccttctaagtatcattgatctccattcttcaat 53001117  T
Q  446 ttccacaatccttcatgcaatgtcatgatttgccgaattacatatgtatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaact 545  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53001118 ttccacaatccttcatgcaatgtcatgatttgccgaattacatatgtatcattaaaaagattaaaaacacttatgaagttgtatgattaggaaagaaact 53001217  T
Q  546 aaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgctattaaataa 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  53001218 aaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattacctctaagttgtcttcaaatgctattaaataa 53001317  T
Q  646 ctaaaatatagcctaatatcatatgatg 673  Q
    ||||||||||||||||||||||||||||    
T  53001318 ctaaaatatagcctaatatcatatgatg 53001345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 53000671 - 53000836
Alignment:
Q  1 ttaatttcgagttacaagccataaaccatagaattccaaaggtttgtaacaaccatttttgttctacaccggacgaacggtcgtgcttcacccacacata 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53000671 ttaatttcgagttacaagccataaactatagaattccaaaggtttgtaacaaccatttttgttctacaccggacgaacggtcgtgcttcacccacacata 53000770  T
Q  101 ggttgtgcttcactttcaacttttgatataatgctttgttttttctctcgattcagctaaattctt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53000771 ggttgtgcttcactttcaacttttgatataatgctttgttttttctctcgattcagctaaattctt 53000836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 395 - 580
Target Start/End: Original strand, 16442147 - 16442333
Alignment:
Q  395 ttgtattgtcttcaaaagccttccaagtatcattgatctccattcttcaatttccacaatccttcatgcaatgtcatgatttgccgaattacat-atgta 493  Q
    ||||||||||||||||| |||||||||||  || ||||| |||| ||||| | ||  |||||| |||||| ||||||| ||| ||||||||||| || ||    
T  16442147 ttgtattgtcttcaaaaaccttccaagtacaatcgatcttcattattcaaatcccttaatcctccatgcagtgtcatgttttaccgaattacatgattta 16442246  T
Q  494 tcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaat 580  Q
    |||||||||||| | |||||||||||| ||||| |||||| ||||| || | |||||||||| | | |||||||||||||| |||||    
T  16442247 tcattaaaaagagtcaaaacacttatggagttgcatgatttggaaataatccaaattacaataacttgaatgaaaataatacaaaat 16442333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 634
Target Start/End: Complemental strand, 20044300 - 20044164
Alignment:
Q  498 taaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaa 597  Q
    |||||||||| |||| || |||| ||||| ||||||| | |||||| | ||||||||||| ||||||||||| |||||||||| ||  || |||||||||    
T  20044300 taaaaagactcaaaatacatatggagttgcatgattaaggaagaaattgaattacaatgactcgaatgaaaacaatataaaatgtctctcgaaccatgaa 20044201  T
Q  598 caactcctctaaattgcctctaaattgtcttcaaatg 634  Q
    ||||||||| ||||   |||||||||||||| |||||    
T  20044200 caactcctccaaataaactctaaattgtctttaaatg 20044164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 385 - 612
Target Start/End: Complemental strand, 30625102 - 30624870
Alignment:
Q  385 ttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccattcttcaatttccacaatccttcatgcaatgtcatgatttgccgaatt 484  Q
    ||||| || |||||| ||||||||||| | ||  ||||| ||||||||| |||||||||| | |    ||||| || ||| |||| |  ||||  |||||    
T  30625102 ttttcccagcttgtactgtcttcaaaatctttttaagtaacattgatcttcattcttcaaatcctttgatcctccacgcagtgtcttactttgtagaatt 30625003  T
Q  485 acat-atgtatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatga-----aaataatataaa 578  Q
    |||| || | ||| |||||||||| ||||||| |||||| ||| ||||||||| | |||||| ||||| ||||| ||| ||||     |||  ||| |||    
T  30625002 acatgatttttcaataaaaagactcaaaacacctatgaaattgcatgattaggga-gaaactgaattataatgactcgtatgagatgaaaacgatacaaa 30624904  T
Q  579 atatccttcaaaccatgaacaactcctctaaatt 612  Q
    ||||||||||||||||||||||||||||||||||    
T  30624903 atatccttcaaaccatgaacaactcctctaaatt 30624870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 509 - 611
Target Start/End: Complemental strand, 10576564 - 10576462
Alignment:
Q  509 aaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctcta 608  Q
    ||||||| ||||||||||||| |||  |||  ||| | ||||||||||| ||||||||||| |||| ||||| | |||||||||||| |||||| |||||    
T  10576564 aaaacacctatgaagttgtataatttagaataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttcttcaaaccatggacaacttctcta 10576465  T
Q  609 aat 611  Q
    |||    
T  10576464 aat 10576462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 651
Target Start/End: Complemental strand, 19101181 - 19101052
Alignment:
Q  522 agttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaa 621  Q
    ||||| ||||||| | |||||||||||||||||||| |  ||| || | |||| ||||||| | ||||||| |||  |||||||  ||||| ||||||||    
T  19101181 agttgcatgattaaggaagaaactaaattacaatgactaaaataaagacaatacaaaatattcctcaaaccgtgactaactccttcaaattacctctaaa 19101082  T
Q  622 ttgtcttcaaatgctattaaataactaaaa 651  Q
     ||||||||||  | | |||||||||||||    
T  19101081 gtgtcttcaaaaacaaataaataactaaaa 19101052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 636
Target Start/End: Original strand, 24042345 - 24042489
Alignment:
Q  492 tatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaac 591  Q
    ||||| |||||| ||| ||||||| |||||| |||| |  ||| ||||||||  |||||||||||| || ||| |||| |||| ||||| ||| ||||||    
T  24042345 tatcagtaaaaaaactcaaaacacctatgaaattgtctagttatgaaagaaatgaaattacaatgactcaaatcaaaacaatacaaaatgtccatcaaac 24042444  T
Q  592 catgaacaactcctctaaattgcctctaaattgtcttcaaatgct 636  Q
    ||  || |||||  |||||   ||| |||||||||||||||||||    
T  24042445 cacaaataactcagctaaagctcctataaattgtcttcaaatgct 24042489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 580
Target Start/End: Complemental strand, 26159878 - 26159796
Alignment:
Q  498 taaaaagactaaaaacacttatgaagttgtatgatt-aggaaagaaactaaattacaatgaatcgaatgaaaataatataaaat 580  Q
    |||||||||| ||||||| |||||||||| || ||| |||| | |||||||||||||| || ||||||||||| |||| |||||    
T  26159878 taaaaagactcaaaacacatatgaagttggataatttaggaca-aaactaaattacaacgactcgaatgaaaacaatacaaaat 26159796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 610
Target Start/End: Original strand, 13275712 - 13275849
Alignment:
Q  474 tttgccgaattacat-atgtatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataa 572  Q
    ||||||||||||||| || || || |||||||||| ||||||| ||   |||||||||||| || | |||| | ||||| || || ||||||||||| ||    
T  13275712 tttgccgaattacatgatttagcaataaaaagactcaaaacacctacagagttgtatgatttgggatgaaagtgaattataacgactcgaatgaaaacaa 13275811  T
Q  573 tataaaatatccttcaaaccatgaacaactcctctaaa 610  Q
    || || || |   |||||||||| |||| |||||||||    
T  13275812 tacaacatgtttctcaaaccatgtacaaatcctctaaa 13275849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 31603803 - 31603864
Alignment:
Q  4 atttcgagttacaagccataaaccatagaattccaaaggtttgtaacaaccatttttgttct 65  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
T  31603803 atttcgagttacaagctataaaccatagaattctaaaggtttgtaacaaccgtttttgttct 31603864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 651
Target Start/End: Complemental strand, 31450104 - 31449925
Alignment:
Q  474 tttgccgaattacat-atgtatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataa 572  Q
    |||||||||| |||| || ||||| |||||| ||| ||||||| ||| |||||| || |||| | || ||||| | ||| ||||| || |||||||| ||    
T  31450104 tttgccgaatcacatgatttatcaataaaaatactcaaaacacctataaagttgcataattaaggaataaactgatttataatgactctaatgaaaaaaa 31450005  T
Q  573 tataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc-tattaaataactaaaa 651  Q
    || ||||||| | | |||||||  |||||||||||||||  | | ||||||||||||||||||  || ||||||||||||    
T  31450004 tacaaaatattcctaaaaccatctacaactcctctaaatgacttataaattgtcttcaaatgcaaataaaataactaaaa 31449925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 465 - 636
Target Start/End: Original strand, 32703893 - 32704065
Alignment:
Q  465 atgtcatgatttgccgaattacata-tgtatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaa 563  Q
    ||||| || ||||| |||||||||| | ||||| |||||||| | |||||||||||||||||||||  ||||  |||||||   ||||||| || || ||    
T  32703893 atgtcttgttttgcggaattacataatttatcaataaaaagattcaaaacacttatgaagttgtatagttagagaagaaaccggattacaacgactcaaa 32703992  T
Q  564 tgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgct 636  Q
    ||||||||||| |||||||   | ||||||||| ||| |  ||||||   ||| | |||||||||||||||||    
T  32703993 tgaaaataatacaaaatatgtcttaaaccatgagcaaataatctaaaaatcctatgaattgtcttcaaatgct 32704065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 17152226 - 17152162
Alignment:
Q  547 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaat 611  Q
    |||||||| || |||||||||||||||| ||||||| | |||||||||  |||||||||||||||    
T  17152226 aattacaacgactcgaatgaaaataatacaaaatattcctcaaaccattgacaactcctctaaat 17152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 31603956 - 31604019
Alignment:
Q  105 gtgcttcactttcaacttttgatataatgctttgttttttctctcgattcagctaaattcttca 168  Q
    |||||| ||||||||||| |  |||||| |||||||||| ||| ||||||||||||||||||||    
T  31603956 gtgcttaactttcaacttctagtataattctttgtttttgctcccgattcagctaaattcttca 31604019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 547 - 633
Target Start/End: Complemental strand, 18117056 - 18116970
Alignment:
Q  547 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaat 633  Q
    ||||||||||| || |||||||| |||| ||||| | | ||||||||||| ||| ||||||||||  ||||| | ||||||||||||    
T  18117056 aattacaatgactcaaatgaaaacaatacaaaatgttcgtcaaaccatgaccaaatcctctaaatgacctctcatttgtcttcaaat 18116970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 545 - 635
Target Start/End: Original strand, 21844669 - 21844759
Alignment:
Q  545 taaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc 635  Q
    ||||||||||||| ||||||||||| ||||||| || | | | |||||||  |||||||||||||||| |  || | ||||||||||||||    
T  21844669 taaattacaatgactcgaatgaaaacaatataacatgttcctaaaaccattgacaactcctctaaattacaacttatttgtcttcaaatgc 21844759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 611
Target Start/End: Original strand, 17415231 - 17415301
Alignment:
Q  541 aaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaat 611  Q
    ||||||||||||||| ||||||||||||| |||| ||||  | | |||| ||||  |||||||||||||||    
T  17415231 aaactaaattacaatcaatcgaatgaaaacaatacaaaaatttcctcaacccattgacaactcctctaaat 17415301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 4451634 - 4451671
Alignment:
Q  573 tataaaatatccttcaaaccatgaacaactcctctaaa 610  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  4451634 tataaaatatcctttaaaccatgaacaacttctctaaa 4451671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 580
Target Start/End: Original strand, 10253625 - 10253815
Alignment:
Q  391 caacttgtattgtcttcaaaagccttccaagtatcattgatctccattcttcaatttccacaatccttcatgcaatgtcatgatttgccgaattacat-a 489  Q
    ||||||||||||||||||||| || |  ||||||||||||||| || ||||||| ||||| |||||| |||| | |||| || |||||| ||||| || |    
T  10253625 caacttgtattgtcttcaaaaaccctataagtatcattgatcttcaatcttcaacttccataatcctccatgtagtgtcttgctttgcccaattatatga 10253724  T
Q  490 tgtatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaat 580  Q
    | ||||| |||||| | | | ||||  |||||||||| |  |||||| |||||| |  ||||||| || ||||||||||| |||| |||||    
T  10253725 tttatcaataaaaataatcagaacaactatgaagttgcacaattagggaagaaattggattacaaagactcgaatgaaaacaatacaaaat 10253815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 609
Target Start/End: Complemental strand, 2351125 - 2351008
Alignment:
Q  492 tatcattaaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaac 591  Q
    ||||| |||||||||| || |||| ||| |||| | ||||||| | |||||| | ||||||||| | | ||||||||| |||| ||||| |   ||||||    
T  2351125 tatcaataaaaagacttaagacacctataaagtcgcatgattatggaagaaattgaattacaataactggaatgaaaacaatacaaaatgtttctcaaac 2351026  T
Q  592 catgaacaactcctctaa 609  Q
    ||||||||||||||||||    
T  2351025 catgaacaactcctctaa 2351008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 1074573 - 1074460
Alignment:
Q  499 aaaaagactaaaaacacttatgaagttgtatgatt-aggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaa 597  Q
    ||||||||  |||||||||||| |||||||| ||| |||| | || | ||||||||||||||||||||||||||||| ||    | | |||||||||  |    
T  1074573 aaaaagacacaaaacacttatggagttgtataatttaggataaaagc-aaattacaatgaatcgaatgaaaataatacaattggttcctcaaaccattga 1074475  T
Q  598 caactcctctaaatt 612  Q
    |||||||||||||||    
T  1074474 caactcctctaaatt 1074460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 567
Target Start/End: Original strand, 28951956 - 28952006
Alignment:
Q  517 tatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaa 567  Q
    |||||||||| ||||||||  |||||||||||||||||||| || ||||||    
T  28951956 tatgaagttgcatgattagagaagaaactaaattacaatgactcaaatgaa 28952006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 421
Target Start/End: Complemental strand, 25706442 - 25706353
Alignment:
Q  332 gtccttcttcgagtattcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaag 421  Q
    |||||||||||||  ||||||||| || || |||| | ||  ||| ||| |||||| | |||||| |||||||||||||| |||||||||    
T  25706442 gtccttcttcgagcgttcttccgtattgaattgtcatggaacttgggatgaattttccccaacttatattgtcttcaaaaaccttccaag 25706353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 29544745 - 29544697
Alignment:
Q  395 ttgtattgtcttcaaaagccttccaagtatcattgatctccattcttca 443  Q
    ||||||||||||||||| ||||| ||| ||||||||||| || ||||||    
T  29544745 ttgtattgtcttcaaaaaccttctaagaatcattgatcttcaatcttca 29544697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 635
Target Start/End: Complemental strand, 24846343 - 24846246
Alignment:
Q  538 aagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc 635  Q
    ||||||||||||||| || | ||||||||||| |||||||||||| | |||||||||| | || ||||||||||  ||||| | ||||||||||||||    
T  24846343 aagaaactaaattacgataactcgaatgaaaaaaatataaaatattcctcaaaccatggaaaaatcctctaaatgacctcttatttgtcttcaaatgc 24846246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 611
Target Start/End: Complemental strand, 20694762 - 20694649
Alignment:
Q  498 taaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaa 597  Q
    |||||||||| ||||||| |||| ||||| || ||| || |  ||||| ||||||||||| ||||||||||| |||| ||||  | | |||||||||  |    
T  20694762 taaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 20694663  T
Q  598 caactcctctaaat 611  Q
    ||| ||||||||||    
T  20694662 caaatcctctaaat 20694649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 611
Target Start/End: Original strand, 4325383 - 4325463
Alignment:
Q  531 attaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaat-atccttcaaaccatgaacaactcctctaaat 611  Q
    |||||| |||||| ||||||||||||| |||||| |||| |||| |||||  ||||| || |||||||||||| ||||||||    
T  4325383 attagggaagaaattaaattacaatgattcgaataaaaacaatacaaaatggtcctt-aagccatgaacaactgctctaaat 4325463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 562 - 610
Target Start/End: Original strand, 25662237 - 25662285
Alignment:
Q  562 aatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaa 610  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||| ||||||    
T  25662237 aatgaaaataatacaaaatgtcctttaaaccataaacaactcatctaaa 25662285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 611
Target Start/End: Complemental strand, 26775163 - 26775064
Alignment:
Q  511 aacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaa 610  Q
    ||||| |||||||||| ||||||||  ||||||||  |||| ||||| ||||||||||| ||||  |||||||| ||||||||||||||||||| |||||    
T  26775163 aacacatatgaagttgcatgattagagaagaaactggattataatgactcgaatgaaaacaata-caaatatccctcaaaccatgaacaactccgctaaa 26775065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 608
Target Start/End: Complemental strand, 21813769 - 21813498
Alignment:
Q  339 ttcgagtattcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccatt 438  Q
    |||||| ||||| || ||| |||||||||| ||  ||| ||| | |||||| ||||||||||| ||||||||| ||||| ||||| | ||||||  ||||    
T  21813769 ttcgagcattctaccatctaaaaatgtcttggaacttgggataattttttcccaacttgtattatcttcaaaatccttctaagtaactttgatcatcatt 21813670  T
Q  439 cttcaatttccacaatccttcatgcaatgtcatgatttgccgaattacata-tgtatcattaaaaa-gactaaaaacacttatgaagttgtatgattagg 536  Q
    |||||  | ||  ||||||  |     |||| || ||||| |||||||||  | ||||| |||||| |||| |||| || |||| ||||| |||| ||||    
T  21813669 cttcatatcccttaatcctcaacttggtgtcttgttttgctgaattacatggtttatcaataaaaaagactcaaaatacctatgtagttgcatgactagg 21813570  T
Q  537 aaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctcta 608  Q
     |||||| | ||||||||| | | |||  |||| |||| ||||| ||| ||||||||| |||||||||||||    
T  21813569 gaagaaattgaattacaataacttgaacaaaaacaatagaaaatgtccctcaaaccattaacaactcctcta 21813498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 611
Target Start/End: Original strand, 21829144 - 21829238
Alignment:
Q  517 tatgaagttgtatgatt-aggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaat 611  Q
    ||||||||||||||||| |||| | ||||| |||||||| || || ||||||||||||| ||||| | | |||||||||  |||||||||||||||    
T  21829144 tatgaagttgtatgatttaggata-aaactgaattacaacgactcaaatgaaaataatacaaaatgttcctcaaaccattgacaactcctctaaat 21829238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 579
Target Start/End: Complemental strand, 11474967 - 11474887
Alignment:
Q  499 aaaaagactaaaaacacttatgaagttgtatgatt-aggaaagaaactaaattacaatgaatcgaatgaaaataatataaaa 579  Q
    ||||||||| ||||||| |||||||||| |||||| |||| | ||| | |||||||| || |||||||||||||||| ||||    
T  11474967 aaaaagactcaaaacacatatgaagttgcatgatttaggata-aaattgaattacaacgagtcgaatgaaaataatacaaaa 11474887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 635
Target Start/End: Original strand, 8402592 - 8402680
Alignment:
Q  547 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc 635  Q
    |||||||| || ||||||||||| |||| ||| | | | |||||||||  |||||||||||||||| | ||| | ||| ||||||||||    
T  8402592 aattacaacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactcctctaaattacatcttatttgccttcaaatgc 8402680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 26102303 - 26102234
Alignment:
Q  374 ttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccattcttca 443  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||| ||  ||||||||||| |||||||||    
T  26102303 ttgagatgaattttcctcaacttgtattgtcttcaaaaaccttctaaaaatcattgatcttcattcttca 26102234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 347 - 443
Target Start/End: Complemental strand, 31313825 - 31313729
Alignment:
Q  347 ttcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccattcttca 443  Q
    |||||||||||| ||||| ||| ||  ||  ||||||||||||  |||||||||||||||||||| ||||  ||| ||||||||||| |||||||||    
T  31313825 ttcttccgtcttgaaatgccttggaacttaggattaatttttcctaacttgtattgtcttcaaaaaccttataagaatcattgatcttcattcttca 31313729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 547 - 635
Target Start/End: Complemental strand, 34381781 - 34381693
Alignment:
Q  547 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc 635  Q
    |||||||| || ||||||||||| ||||||| || | ||||||||||| ||||||||||||||||| | ||| | ||| ||||||||||    
T  34381781 aattacaacgactcgaatgaaaacaatataatatgttcttcaaaccattaacaactcctctaaattacatcttatttgccttcaaatgc 34381693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 651
Target Start/End: Original strand, 15416852 - 15417120
Alignment:
Q  385 ttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccattcttcaatttccacaatccttcatgcaatgtcatgatttgccgaatt 484  Q
    ||||| ||||||| |||||||| |||| ||||  ||| | ||||||||| |||||||||  | ||   ||||||||||   |||| || |||||||||||    
T  15416852 ttttcccaacttgcattgtctttaaaaaccttataagaaccattgatcttcattcttcatatcccttgatccttcatgtggtgtcttgctttgccgaatt 15416951  T
Q  485 acat-atgtatcattaaaaagactaaaaacacttatgaagttgtatgatt-aggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatat 582  Q
    |||| || |  |  |||||||||| ||||||| |||  ||||| |||||| | || | ||| | ||||| ||||||| ||||||||| |||| ||||| |    
T  15416952 acatgatttgactataaaaagactcaaaacacctatacagttgcatgatttaagata-aaagtgaattaaaatgaattgaatgaaaacaataaaaaatgt 15417050  T
Q  583 ccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc-tattaaataactaaaa 651  Q
       |||||||||||||||||||| |||||   |||| | ||||||||||||||  || ||||||||||||    
T  15417051 ttctcaaaccatgaacaactcctttaaatgatctcttatttgtcttcaaatgcgaataaaataactaaaa 15417120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 34935169 - 34935272
Alignment:
Q  339 ttcgagtattcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccatt 438  Q
    ||||||| ||| |||||||| ||||| ||||||  ||| ||| |||||| | ||||||||||| ||||||||| ||||  ||| | |||||||||| |||    
T  34935169 ttcgagtgttcatccgtcttgaaatgccttagaacttgggatgaattttccccaacttgtattatcttcaaaaaccttataag-aacattgatctctatt 34935267  T
Q  439 cttca 443  Q
    |||||    
T  34935268 cttca 34935272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 574
Target Start/End: Complemental strand, 5154044 - 5153804
Alignment:
Q  334 ccttcttcgagtattcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatct 433  Q
    |||| |||||| |||||||||||||  |||||||| ||  |||| || ||||||  |||  || |||||||||||||| ||||||||  |||||||||||    
T  5154044 cctttttcgagcattcttccgtcttgcaatgtcttggaacttgaaatgaattttattcatgttatattgtcttcaaaaaccttccaataatcattgatct 5153945  T
Q  434 ccattcttcaatttccacaatccttcatgcaatgtcatgatttgccgaattacat-atgtatcattaaaaagactaaaaacacttatgaagttgtatga- 531  Q
     || ||||| || ||| | ||||||||    ||||| || |||||| | |||||| || | | | |||||||||| ||||||| |||  ||||| ||||     
T  5153944 tcaatcttc-atatcctcgatccttcactttatgtcttgttttgcctatttacatgatttcttactaaaaagactcaaaacacctatcgagttgaatgat 5153846  T
Q  532 ttaggaaagaaactaaattacaatgaatcgaatgaaaataata 574  Q
    ||| || | ||||| ||||||||||| ||||||||||||||||    
T  5153845 ttaagata-aaactgaattacaatgactcgaatgaaaataata 5153804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12521072 - 12521008
Alignment:
Q  1 ttaatttcgagttacaagccataaaccatagaattccaaaggtttgtaacaaccatttttgttct 65  Q
    |||||||||||||||||| ||||||  | |||||| |||| |||||||||||||||||| |||||    
T  12521072 ttaatttcgagttacaagtcataaatgagagaatttcaaaagtttgtaacaaccattttggttct 12521008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 651
Target Start/End: Complemental strand, 31436601 - 31436447
Alignment:
Q  498 taaaaagactaaaaacacttatgaagttgtatgatt-aggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatga 596  Q
    |||||||| | ||||||| |||| ||||| |||||| |||| | ||||||||||||| ||| ||||||||||| ||||||   ||| | ||||| |||      
T  31436601 taaaaagattcaaaacacctatgtagttgcatgatttaggata-aaactaaattacactgactcgaatgaaaaaaatatagtttattcctcaaatcattg 31436503  T
Q  597 acaactcctctaaattgcctctaaattgtcttcaaatgc-tattaaataactaaaa 651  Q
    |||||||||||||||| | ||| | ||| ||||||||||  || ||||||||||||    
T  31436502 acaactcctctaaattacatcttatttgccttcaaatgcagataaaataactaaaa 31436447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 637
Target Start/End: Original strand, 12774879 - 12774975
Alignment:
Q  541 aaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgcta 637  Q
    ||||||||||||||||| || ||| ||||||||||||||| | | |||||||||  | ||| || |||| |  ||||| | ||||||||||||||||    
T  12774879 aaactaaattacaatgactcaaataaaaataatataaaatgtacgtcaaaccattgataaccccgctaagtgacctcttatttgtcttcaaatgcta 12774975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 631
Target Start/End: Original strand, 13530117 - 13530231
Alignment:
Q  517 tatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcct 616  Q
    |||| ||||| |||||||||||| ||| | |||| ||| || | ||||||||| |||| ||||| | | |||||||||  ||| |||||||||||  |||    
T  13530117 tatggagttgcatgattaggaaataaattgaatttcaaagacttgaatgaaaacaatacaaaatgttcctcaaaccatcgacatctcctctaaatgacct 13530216  T
Q  617 ctaaattgtcttcaa 631  Q
    || | ||||||||||    
T  13530217 cttatttgtcttcaa 13530231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 631
Target Start/End: Original strand, 13619656 - 13619770
Alignment:
Q  517 tatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcct 616  Q
    |||| ||||| |||||||||||| ||| | |||| ||| || | ||||||||| |||| ||||| | | |||||||||  ||| |||||||||||  |||    
T  13619656 tatggagttgcatgattaggaaataaattgaatttcaaagacttgaatgaaaacaatacaaaatgttcctcaaaccatcgacatctcctctaaatgacct 13619755  T
Q  617 ctaaattgtcttcaa 631  Q
    || | ||||||||||    
T  13619756 cttatttgtcttcaa 13619770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 591
Target Start/End: Original strand, 41505549 - 41505623
Alignment:
Q  517 tatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaac 591  Q
    |||||||||| ||||||||| | |||| | ||||||||  | |||||||||||||||| ||||||| | ||||||    
T  41505549 tatgaagttgcatgattaggtatgaaagtgaattacaacaactcgaatgaaaataatacaaaatattcctcaaac 41505623  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 603
Target Start/End: Original strand, 30851141 - 30851197
Alignment:
Q  547 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactc 603  Q
    |||||||| || |||||||||||||||||||||  | | ||||||||| ||||||||    
T  30851141 aattacaacgattcgaatgaaaataatataaaaacttcctcaaaccatcaacaactc 30851197  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 443
Target Start/End: Complemental strand, 16439744 - 16439635
Alignment:
Q  334 ccttcttcgagtattcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatct 433  Q
    |||| ||||||  |||||||||||||||||||||| ||  ||| ||| |||||| |  |||||||||| ||||||||| | ||| ||| | |||||||||    
T  16439744 cctttttcgagcgttcttccgtcttaaaatgtcttggatcttgcgatgaattttcccgaacttgtattttcttcaaaaccattctaagaaccattgatct 16439645  T
Q  434 ccattcttca 443  Q
     |||||||||    
T  16439644 tcattcttca 16439635  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 557
Target Start/End: Original strand, 23419101 - 23419160
Alignment:
Q  498 taaaaagactaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatga 557  Q
    |||||||||| ||||||||| |||||||| ||||| | |||||||||| |||||||||||    
T  23419101 taaaaagacttaaaacacttgtgaagttgcatgataatgaaagaaactgaattacaatga 23419160  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 32930292 - 32930370
Alignment:
Q  352 ccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgat 431  Q
    ||||||| ||||| ||| ||  ||| |||||||||| | |||||||||||||||| |||| ||||||||| |||||||||    
T  32930292 ccgtcttgaaatgccttggaacttgtgattaattttcc-caacttgtattgtctttaaaaaccttccaagaatcattgat 32930370  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 444
Target Start/End: Original strand, 23418952 - 23419048
Alignment:
Q  348 tcttccgtcttaaaatgtcttagagtttgagattaatttttctcaacttgtattgtcttcaaaagccttccaagtatcattgatctccattcttcaa 444  Q
    |||||||||||||||||  || ||  ||  ||| ||||||  ||||||||||||| |||||||| ||||| | ||| ||||||| | ||||||||||    
T  23418952 tcttccgtcttaaaatgcgttggaactttggatgaattttcttcaacttgtattgacttcaaaaaccttctacgtaacattgatattcattcttcaa 23419048  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 635
Target Start/End: Original strand, 26512819 - 26512907
Alignment:
Q  547 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc 635  Q
    |||||||| |||||||||||||| |||| ||||| |    ||||||||  |||||||||||||||  ||||| | ||| ||||||||||    
T  26512819 aattacaacgaatcgaatgaaaacaatacaaaatgttacacaaaccattgacaactcctctaaatgacctcttatttgccttcaaatgc 26512907  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 635
Target Start/End: Original strand, 26517935 - 26518023
Alignment:
Q  547 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaattgcctctaaattgtcttcaaatgc 635  Q
    |||||||| |||||||||||||| |||| ||||| |    ||||||||  |||||||||||||||  ||||| | ||| ||||||||||    
T  26517935 aattacaacgaatcgaatgaaaacaatacaaaatgttacacaaaccattgacaactcctctaaatgacctcttatttgccttcaaatgc 26518023  T

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