View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1508_low_14 (Length: 401)
Name: NF1508_low_14
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1508_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 391
Target Start/End: Complemental strand, 31941816 - 31941426
Alignment:
| Q |
1 |
cttccaaccgctccgtctctgcttctcctccttcaccggaactcgttcagtagacatggcgaacagcgggactatgctcatgattccaccggacttcact |
100 |
Q |
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| T |
31941816 |
cttccaaccgctccgtctctgcttctcctccttcaccggaactcgttcagtagacatggcgaaccgcgggactatgctcatgattccaccggacttcact |
31941717 |
T |
|
| Q |
101 |
ttcaaggccttagacagtggcacgtggtggaagagaggggaggaaacggtggggaagaaacaaactccagcggcaagcatggctgttggtgagtcagatt |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
31941716 |
ttcatggccttagacagtggcacgtggtggaagagagaggaggaaacggtggggaagaaacaaactccagcggcaagcatggctgttggtgagtcaggtt |
31941617 |
T |
|
| Q |
201 |
tgaagctgaagcagtttggaattcaatggtaattattaacatgatgacaattaatctcaatatgaagatgtgatatatatggtataaatatgatgaaata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
31941616 |
tgaagctgaagcagtttggaattcaatggtaattattaacatgatgacaattaatctcaatatgaagatgagatatatatggtataaatatgatgaaata |
31941517 |
T |
|
| Q |
301 |
gtacgtaataaataaattatgtgactagaaaaaacacatgtattgctcattatggctgcgcttgtgtgtttgagttgtgtacgagtctctg |
391 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31941516 |
gtacgtaataaatcaattatgtgactagaaaaaacacatgtattgctcattatggctgcgcttgtgtgtttgagttgtgtacgagtctctg |
31941426 |
T |
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