View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1508_low_30 (Length: 243)

Name: NF1508_low_30
Description: NF1508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1508_low_30
NF1508_low_30
[»] chr1 (88 HSPs)
chr1 (30-243)||(8460093-8460307)
chr1 (33-168)||(38689869-38690005)
chr1 (30-171)||(22345195-22345337)
chr1 (38-168)||(41804037-41804169)
chr1 (34-171)||(18975120-18975259)
chr1 (34-171)||(46141716-46141855)
chr1 (28-113)||(6562155-6562241)
chr1 (34-130)||(52802105-52802203)
chr1 (29-113)||(6557908-6557993)
chr1 (33-172)||(11183119-11183260)
chr1 (29-104)||(44336251-44336327)
chr1 (34-171)||(49924790-49924929)
chr1 (33-113)||(44470010-44470091)
chr1 (33-112)||(15047276-15047356)
chr1 (37-171)||(23276111-23276247)
chr1 (34-171)||(6437539-6437678)
chr1 (31-168)||(36076555-36076693)
chr1 (29-168)||(29261352-29261492)
chr1 (33-171)||(9711650-9711790)
chr1 (33-172)||(13971997-13972136)
chr1 (33-171)||(49927512-49927652)
chr1 (55-171)||(22346038-22346152)
chr1 (31-168)||(46973141-46973279)
chr1 (29-83)||(36072393-36072447)
chr1 (30-83)||(19054246-19054299)
chr1 (33-113)||(23359348-23359429)
chr1 (88-168)||(35521551-35521632)
chr1 (30-168)||(21944376-21944516)
chr1 (58-168)||(36908515-36908627)
chr1 (109-172)||(1872041-1872104)
chr1 (31-168)||(13173773-13173911)
chr1 (55-113)||(30910024-30910083)
chr1 (55-113)||(41453831-41453890)
chr1 (26-84)||(8548661-8548719)
chr1 (33-79)||(13636121-13636167)
chr1 (34-168)||(26633467-26633600)
chr1 (55-168)||(51666660-51666774)
chr1 (26-79)||(3728763-3728816)
chr1 (55-171)||(8458919-8459036)
chr1 (65-168)||(19053996-19054101)
chr1 (26-79)||(22524154-22524207)
chr1 (28-84)||(3943997-3944053)
chr1 (28-84)||(3993837-3993893)
chr1 (31-83)||(7981136-7981188)
chr1 (33-171)||(48751409-48751549)
chr1 (30-148)||(19499108-19499226)
chr1 (24-74)||(471086-471136)
chr1 (33-83)||(1656088-1656138)
chr1 (110-168)||(14172051-14172109)
chr1 (33-79)||(19159651-19159697)
chr1 (33-79)||(19161920-19161966)
chr1 (59-171)||(27484993-27485107)
chr1 (26-84)||(29622416-29622474)
chr1 (33-83)||(46216422-46216472)
chr1 (33-83)||(46217317-46217367)
chr1 (98-171)||(94344-94417)
chr1 (26-79)||(26879287-26879340)
chr1 (33-82)||(41909704-41909753)
chr1 (29-93)||(50113320-50113385)
chr1 (29-131)||(13178127-13178231)
chr1 (35-79)||(15051349-15051393)
chr1 (28-84)||(20353929-20353985)
chr1 (28-84)||(38771652-38771708)
chr1 (33-96)||(50617213-50617279)
chr1 (55-173)||(51288819-51288939)
chr1 (11-58)||(19159557-19159604)
chr1 (34-171)||(29438020-29438159)
chr1 (25-72)||(31783706-31783753)
chr1 (33-79)||(9710606-9710652)
chr1 (34-72)||(13633904-13633942)
chr1 (33-79)||(29424408-29424454)
chr1 (33-83)||(29425335-29425385)
chr1 (33-79)||(44598905-44598951)
chr1 (107-168)||(1656159-1656220)
chr1 (26-79)||(2425677-2425730)
chr1 (33-78)||(3941149-3941194)
chr1 (34-79)||(16270025-16270070)
chr1 (38-161)||(25040080-25040205)
chr1 (114-167)||(36911750-36911803)
chr1 (37-74)||(38119614-38119651)
chr1 (34-83)||(47585621-47585670)
chr1 (58-168)||(49857873-49857983)
chr1 (35-122)||(51271592-51271681)
chr1 (34-75)||(51289960-51290001)
chr1 (55-94)||(20349469-20349509)
chr1 (58-113)||(30905764-30905820)
chr1 (112-160)||(35527093-35527141)
chr1 (33-171)||(46886387-46886526)
[»] chr6 (53 HSPs)
chr6 (30-171)||(18605979-18606121)
chr6 (65-171)||(2052615-2052721)
chr6 (37-172)||(2050962-2051098)
chr6 (26-171)||(31768687-31768834)
chr6 (26-172)||(11840242-11840390)
chr6 (31-124)||(16192750-16192845)
chr6 (55-172)||(29286162-29286281)
chr6 (34-170)||(13404632-13404770)
chr6 (55-156)||(18610227-18610329)
chr6 (40-171)||(7361125-7361258)
chr6 (33-113)||(13388707-13388788)
chr6 (29-168)||(23958827-23958968)
chr6 (28-171)||(29076317-29076462)
chr6 (28-171)||(29109850-29109995)
chr6 (28-171)||(29111290-29111435)
chr6 (8-68)||(26712158-26712218)
chr6 (65-171)||(29065674-29065782)
chr6 (65-171)||(29074687-29074795)
chr6 (65-171)||(29079451-29079559)
chr6 (65-171)||(29107260-29107368)
chr6 (33-104)||(31146375-31146447)
chr6 (86-168)||(13479663-13479746)
chr6 (26-104)||(28362723-28362802)
chr6 (33-148)||(12783956-12784073)
chr6 (65-171)||(29061230-29061338)
chr6 (33-84)||(26712071-26712122)
chr6 (33-79)||(6204855-6204901)
chr6 (33-79)||(11691822-11691868)
chr6 (33-79)||(22305136-22305182)
chr6 (36-168)||(32643523-32643657)
chr6 (33-84)||(13382652-13382703)
chr6 (86-172)||(25141132-25141219)
chr6 (26-84)||(27616738-27616796)
chr6 (33-79)||(28249913-28249959)
chr6 (114-168)||(32026042-32026096)
chr6 (65-144)||(7537159-7537240)
chr6 (64-171)||(13401420-13401529)
chr6 (33-81)||(11694026-11694074)
chr6 (34-74)||(18351643-18351683)
chr6 (33-171)||(14012374-14012513)
chr6 (55-113)||(18347034-18347093)
chr6 (24-79)||(26351086-26351141)
chr6 (33-79)||(6207059-6207105)
chr6 (33-79)||(9048103-9048149)
chr6 (33-79)||(9049083-9049129)
chr6 (34-84)||(26712223-26712273)
chr6 (33-79)||(31771740-31771786)
chr6 (33-83)||(32223512-32223562)
chr6 (30-79)||(15888796-15888845)
chr6 (30-83)||(17338760-17338813)
chr6 (34-83)||(30258315-30258364)
chr6 (33-109)||(31501617-31501694)
chr6 (38-74)||(24721962-24721998)
[»] chr2 (80 HSPs)
chr2 (33-171)||(25184829-25184968)
chr2 (30-168)||(435280-435419)
chr2 (30-177)||(41008924-41009072)
chr2 (33-170)||(41004464-41004602)
chr2 (37-172)||(82265-82401)
chr2 (34-172)||(35493341-35493481)
chr2 (31-160)||(34921756-34921886)
chr2 (33-168)||(28342460-28342597)
chr2 (38-168)||(2917620-2917752)
chr2 (26-172)||(7189943-7190090)
chr2 (33-113)||(3795330-3795411)
chr2 (56-171)||(41053690-41053807)
chr2 (33-171)||(41183223-41183350)
chr2 (33-171)||(41500233-41500373)
chr2 (31-168)||(45475377-45475516)
chr2 (28-172)||(27276368-27276514)
chr2 (86-171)||(41181371-41181457)
chr2 (39-171)||(41497406-41497540)
chr2 (33-172)||(9660054-9660195)
chr2 (28-171)||(3943186-3943330)
chr2 (30-148)||(19187219-19187339)
chr2 (33-172)||(23346714-23346854)
chr2 (26-171)||(25964738-25964892)
chr2 (33-171)||(23347327-23347466)
chr2 (33-109)||(24601636-24601713)
chr2 (33-109)||(24612401-24612478)
chr2 (46-172)||(1149405-1149533)
chr2 (34-168)||(8268749-8268885)
chr2 (11-74)||(28472060-28472123)
chr2 (33-84)||(41053567-41053618)
chr2 (33-119)||(43943676-43943763)
chr2 (55-167)||(1096533-1096647)
chr2 (33-79)||(17424160-17424206)
chr2 (26-84)||(28468664-28468722)
chr2 (33-79)||(43982227-43982273)
chr2 (34-168)||(23409501-23409637)
chr2 (29-171)||(34639309-34639453)
chr2 (112-171)||(16580479-16580538)
chr2 (33-84)||(22003400-22003451)
chr2 (55-172)||(24607589-24607708)
chr2 (36-79)||(28477069-28477112)
chr2 (55-113)||(38945755-38945814)
chr2 (33-84)||(41053630-41053681)
chr2 (26-73)||(43536136-43536183)
chr2 (34-171)||(43950244-43950380)
chr2 (26-122)||(10825201-10825299)
chr2 (26-84)||(17420591-17420649)
chr2 (33-94)||(24754023-24754085)
chr2 (99-172)||(41052614-41052688)
chr2 (31-104)||(43491111-43491185)
chr2 (28-77)||(7263047-7263096)
chr2 (59-162)||(12905492-12905597)
chr2 (30-82)||(2271733-2271785)
chr2 (35-87)||(2983420-2983472)
chr2 (28-72)||(5351726-5351770)
chr2 (31-83)||(12908426-12908478)
chr2 (28-84)||(18000255-18000311)
chr2 (26-82)||(30493384-30493440)
chr2 (33-85)||(31974246-31974298)
chr2 (28-84)||(44100792-44100848)
chr2 (55-109)||(3803564-3803619)
chr2 (57-115)||(20951069-20951128)
chr2 (33-76)||(29397941-29397984)
chr2 (28-79)||(39798471-39798522)
chr2 (33-79)||(3937851-3937897)
chr2 (33-79)||(14456530-14456576)
chr2 (34-84)||(26543989-26544039)
chr2 (33-79)||(30273149-30273195)
chr2 (33-79)||(33222644-33222690)
chr2 (33-79)||(42499814-42499860)
chr2 (33-74)||(3935896-3935937)
chr2 (26-79)||(7267436-7267489)
chr2 (29-148)||(23786081-23786202)
chr2 (26-79)||(39947627-39947680)
chr2 (34-79)||(40221130-40221175)
chr2 (34-79)||(43984301-43984346)
chr2 (33-171)||(24512101-24512241)
chr2 (38-109)||(30271071-30271143)
chr2 (40-84)||(41564498-41564542)
chr2 (34-148)||(45137433-45137549)
[»] chr7 (64 HSPs)
chr7 (30-172)||(47060860-47061003)
chr7 (33-171)||(19044228-19044367)
chr7 (33-171)||(20710269-20710408)
chr7 (41-172)||(41049196-41049328)
chr7 (40-171)||(34622433-34622566)
chr7 (40-171)||(34623386-34623519)
chr7 (33-173)||(41047710-41047851)
chr7 (36-172)||(48314607-48314744)
chr7 (33-171)||(42681928-42682068)
chr7 (33-168)||(9494805-9494942)
chr7 (33-171)||(28980171-28980312)
chr7 (33-172)||(30355238-30355379)
chr7 (33-148)||(34742394-34742511)
chr7 (26-171)||(47776266-47776413)
chr7 (55-168)||(36186494-36186608)
chr7 (37-171)||(36392059-36392195)
chr7 (33-171)||(37340236-37340376)
chr7 (8-74)||(10098014-10098080)
chr7 (33-94)||(42499421-42499483)
chr7 (98-171)||(48269615-48269688)
chr7 (26-93)||(34738377-34738445)
chr7 (34-172)||(46863344-46863484)
chr7 (33-84)||(15070378-15070429)
chr7 (34-159)||(46860457-46860584)
chr7 (33-79)||(9367723-9367769)
chr7 (55-171)||(27453615-27453733)
chr7 (29-168)||(10705185-10705326)
chr7 (57-148)||(34139854-34139947)
chr7 (59-170)||(45361584-45361697)
chr7 (26-74)||(35606822-35606870)
chr7 (28-84)||(45767855-45767911)
chr7 (55-113)||(618746-618805)
chr7 (33-76)||(17840889-17840932)
chr7 (33-84)||(18105396-18105447)
chr7 (26-84)||(15074220-15074278)
chr7 (26-84)||(41884118-41884176)
chr7 (26-79)||(17834515-17834568)
chr7 (33-93)||(40587674-40587735)
chr7 (110-171)||(41623893-41623954)
chr7 (111-172)||(46596829-46596890)
chr7 (57-172)||(19804512-19804628)
chr7 (38-113)||(29592536-29592612)
chr7 (28-84)||(30791002-30791058)
chr7 (33-84)||(10098116-10098167)
chr7 (87-168)||(10225897-10225980)
chr7 (33-79)||(9365707-9365753)
chr7 (33-79)||(10098394-10098440)
chr7 (98-171)||(21185553-21185627)
chr7 (92-173)||(28112774-28112856)
chr7 (110-172)||(48829896-48829958)
chr7 (33-82)||(14102347-14102396)
chr7 (33-82)||(14412364-14412413)
chr7 (37-74)||(16674802-16674839)
chr7 (37-74)||(17649170-17649207)
chr7 (110-171)||(21190666-21190727)
chr7 (31-76)||(36781446-36781491)
chr7 (29-74)||(42795108-42795153)
chr7 (34-83)||(48590339-48590388)
chr7 (37-85)||(11629764-11629812)
chr7 (28-76)||(20353924-20353972)
chr7 (28-84)||(20564096-20564152)
chr7 (37-85)||(29112395-29112443)
chr7 (37-85)||(37345095-37345143)
chr7 (33-110)||(43032969-43033048)
[»] chr8 (68 HSPs)
chr8 (33-172)||(34823015-34823156)
chr8 (34-171)||(2146957-2147095)
chr8 (30-167)||(41855306-41855445)
chr8 (34-172)||(18438567-18438707)
chr8 (67-172)||(39753031-39753137)
chr8 (33-148)||(35962264-35962381)
chr8 (26-173)||(41250064-41250212)
chr8 (33-172)||(1114676-1114817)
chr8 (48-171)||(39751008-39751132)
chr8 (33-172)||(40077249-40077390)
chr8 (8-68)||(36677831-36677891)
chr8 (33-171)||(22550864-22551003)
chr8 (39-172)||(44052231-44052366)
chr8 (33-172)||(18441440-18441581)
chr8 (33-171)||(41858122-41858260)
chr8 (8-68)||(184455-184515)
chr8 (30-168)||(7168025-7168165)
chr8 (56-172)||(45454339-45454457)
chr8 (31-149)||(18205742-18205862)
chr8 (12-68)||(22014364-22014420)
chr8 (111-171)||(43377331-43377391)
chr8 (33-171)||(26451420-26451554)
chr8 (34-171)||(34366846-34366984)
chr8 (36-172)||(35389441-35389579)
chr8 (59-171)||(41276885-41276999)
chr8 (34-158)||(42605234-42605360)
chr8 (26-79)||(26663025-26663078)
chr8 (34-83)||(32383205-32383254)
chr8 (34-83)||(32437160-32437209)
chr8 (26-79)||(39601732-39601785)
chr8 (28-84)||(8419427-8419483)
chr8 (31-75)||(22577697-22577741)
chr8 (28-84)||(32375674-32375730)
chr8 (38-113)||(35966753-35966829)
chr8 (33-84)||(184551-184602)
chr8 (36-169)||(38872932-38873067)
chr8 (33-76)||(41016445-41016488)
chr8 (28-94)||(43262433-43262500)
chr8 (33-75)||(42602492-42602534)
chr8 (26-79)||(39939207-39939260)
chr8 (55-171)||(43690055-43690172)
chr8 (35-115)||(45133274-45133355)
chr8 (28-84)||(7344551-7344607)
chr8 (28-84)||(17924277-17924333)
chr8 (28-84)||(22014269-22014325)
chr8 (36-84)||(36677931-36677979)
chr8 (34-94)||(43679410-43679470)
chr8 (59-109)||(1116213-1116264)
chr8 (98-172)||(5300680-5300755)
chr8 (33-84)||(15030907-15030958)
chr8 (33-80)||(15033146-15033193)
chr8 (55-113)||(20549253-20549312)
chr8 (32-83)||(28646245-28646296)
chr8 (32-83)||(28650829-28650880)
chr8 (55-113)||(41743883-41743942)
chr8 (33-84)||(45066360-45066411)
chr8 (55-96)||(39493-39535)
chr8 (33-79)||(483844-483890)
chr8 (33-79)||(21406295-21406341)
chr8 (33-79)||(21800787-21800833)
chr8 (33-79)||(22519561-22519607)
chr8 (33-79)||(40740934-40740980)
chr8 (33-113)||(32584045-32584126)
chr8 (88-172)||(34234516-34234601)
chr8 (34-83)||(40039150-40039199)
chr8 (34-83)||(40039684-40039733)
chr8 (33-85)||(914739-914791)
chr8 (55-172)||(43188006-43188126)
[»] scaffold0340 (1 HSPs)
scaffold0340 (33-171)||(1180-1319)
[»] chr5 (69 HSPs)
chr5 (30-171)||(4204207-4204348)
chr5 (34-171)||(3603148-3603287)
chr5 (31-168)||(18538332-18538471)
chr5 (55-172)||(31094496-31094614)
chr5 (33-170)||(34123934-34124073)
chr5 (33-136)||(34122493-34122598)
chr5 (33-171)||(25877556-25877695)
chr5 (34-171)||(28388519-28388658)
chr5 (33-131)||(18307228-18307328)
chr5 (33-171)||(20192287-20192427)
chr5 (34-172)||(20200148-20200288)
chr5 (86-172)||(18310074-18310161)
chr5 (36-172)||(42539375-42539513)
chr5 (34-168)||(34682194-34682330)
chr5 (33-171)||(7762243-7762382)
chr5 (11-74)||(27662243-27662306)
chr5 (38-171)||(41201662-41201797)
chr5 (55-171)||(13568096-13568214)
chr5 (40-172)||(39743154-39743288)
chr5 (33-109)||(542789-542866)
chr5 (33-113)||(7017505-7017586)
chr5 (33-172)||(38968028-38968169)
chr5 (34-113)||(28387262-28387342)
chr5 (37-170)||(7800990-7801125)
chr5 (28-94)||(25897073-25897140)
chr5 (28-113)||(1035177-1035263)
chr5 (110-172)||(7796594-7796656)
chr5 (33-79)||(19037469-19037515)
chr5 (26-84)||(28238162-28238220)
chr5 (26-79)||(7757353-7757406)
chr5 (33-113)||(41798811-41798892)
chr5 (22-74)||(8577007-8577059)
chr5 (31-83)||(25497535-25497587)
chr5 (55-168)||(1397371-1397486)
chr5 (33-166)||(33995147-33995282)
chr5 (33-79)||(13837752-13837798)
chr5 (26-84)||(19041109-19041167)
chr5 (33-94)||(25890006-25890068)
chr5 (55-171)||(4196517-4196633)
chr5 (33-113)||(17965842-17965923)
chr5 (37-172)||(17966889-17967026)
chr5 (33-77)||(11346037-11346081)
chr5 (28-84)||(14280894-14280950)
chr5 (36-84)||(38855713-38855761)
chr5 (37-171)||(41799770-41799906)
chr5 (55-113)||(7021879-7021938)
chr5 (33-130)||(8702197-8702296)
chr5 (28-79)||(11028998-11029049)
chr5 (34-168)||(25499887-25500025)
chr5 (31-160)||(33993225-33993356)
chr5 (34-84)||(13838424-13838474)
chr5 (33-79)||(19035266-19035312)
chr5 (33-71)||(27659976-27660014)
chr5 (55-171)||(27867841-27867959)
chr5 (26-84)||(28876666-28876724)
chr5 (29-79)||(29430050-29430100)
chr5 (33-79)||(30192520-30192566)
chr5 (110-172)||(30611172-30611234)
chr5 (110-172)||(30612894-30612956)
chr5 (33-79)||(30708931-30708977)
chr5 (98-171)||(42537135-42537209)
chr5 (33-74)||(540959-541000)
chr5 (38-75)||(30354400-30354437)
chr5 (35-72)||(30705168-30705205)
chr5 (34-79)||(37814610-37814655)
chr5 (36-76)||(5807-5847)
chr5 (38-168)||(1398541-1398673)
chr5 (37-85)||(36503106-36503154)
chr5 (55-94)||(37820875-37820915)
[»] chr4 (87 HSPs)
chr4 (33-172)||(44051091-44051232)
chr4 (34-168)||(37959720-37959856)
chr4 (38-172)||(49572904-49573040)
chr4 (34-172)||(11494477-11494616)
chr4 (33-171)||(9889928-9890068)
chr4 (38-171)||(38464770-38464904)
chr4 (33-168)||(958593-958729)
chr4 (33-171)||(4979916-4980056)
chr4 (55-168)||(21472505-21472620)
chr4 (55-171)||(50274694-50274812)
chr4 (33-113)||(15995715-15995796)
chr4 (33-113)||(19069180-19069261)
chr4 (33-171)||(1041869-1042009)
chr4 (26-172)||(8109324-8109472)
chr4 (34-168)||(29700302-29700438)
chr4 (38-171)||(6280791-6280926)
chr4 (55-172)||(50278819-50278938)
chr4 (28-113)||(15999793-15999879)
chr4 (33-168)||(44561329-44561466)
chr4 (34-168)||(955729-955865)
chr4 (8-68)||(37563183-37563243)
chr4 (8-68)||(39773507-39773567)
chr4 (34-168)||(51426474-51426610)
chr4 (8-68)||(54633918-54633978)
chr4 (26-172)||(51492005-51492152)
chr4 (34-91)||(19073655-19073713)
chr4 (26-115)||(21022880-21022970)
chr4 (26-90)||(37022053-37022118)
chr4 (34-172)||(16983455-16983595)
chr4 (33-171)||(16984160-16984300)
chr4 (30-168)||(21470840-21470980)
chr4 (34-160)||(33383750-33383878)
chr4 (33-104)||(41023388-41023460)
chr4 (34-171)||(39590568-39590707)
chr4 (57-171)||(56304811-56304926)
chr4 (33-79)||(6178109-6178155)
chr4 (12-74)||(21018067-21018129)
chr4 (26-84)||(30726733-30726791)
chr4 (26-84)||(40358272-40358330)
chr4 (33-79)||(49094112-49094158)
chr4 (26-79)||(31425310-31425363)
chr4 (34-83)||(34151638-34151687)
chr4 (28-84)||(49563863-49563919)
chr4 (59-168)||(4768615-4768726)
chr4 (24-79)||(28234444-28234499)
chr4 (33-84)||(37563279-37563330)
chr4 (33-92)||(38460441-38460500)
chr4 (33-84)||(39773427-39773478)
chr4 (33-84)||(54634014-54634065)
chr4 (26-84)||(1089576-1089634)
chr4 (29-83)||(17342166-17342220)
chr4 (37-79)||(20208538-20208580)
chr4 (33-79)||(41795355-41795401)
chr4 (26-84)||(49169089-49169147)
chr4 (33-79)||(55407792-55407838)
chr4 (33-79)||(55793948-55793994)
chr4 (33-79)||(56138280-56138326)
chr4 (34-83)||(33409547-33409596)
chr4 (34-83)||(33410229-33410278)
chr4 (111-168)||(51644553-51644610)
chr4 (39-84)||(52529236-52529281)
chr4 (33-73)||(67626-67666)
chr4 (110-170)||(4975752-4975812)
chr4 (28-72)||(26932619-26932663)
chr4 (29-85)||(38368250-38368306)
chr4 (55-109)||(1044540-1044595)
chr4 (55-109)||(3403844-3403899)
chr4 (34-85)||(41933622-41933673)
chr4 (35-74)||(44680077-44680116)
chr4 (32-79)||(48256566-48256613)
chr4 (64-168)||(34154432-34154538)
chr4 (58-130)||(37394223-37394297)
chr4 (33-79)||(41793392-41793438)
chr4 (26-84)||(41800929-41800987)
chr4 (33-113)||(21015732-21015813)
chr4 (34-79)||(21018004-21018049)
chr4 (21-58)||(30723223-30723260)
chr4 (33-74)||(40354638-40354679)
chr4 (111-168)||(44558637-44558694)
chr4 (30-78)||(20209323-20209371)
chr4 (33-85)||(23221669-23221721)
chr4 (26-74)||(37015931-37015979)
chr4 (55-102)||(37395212-37395260)
chr4 (28-84)||(37563088-37563144)
chr4 (57-171)||(39588026-39588142)
chr4 (34-82)||(45971759-45971807)
chr4 (110-166)||(51683199-51683255)
[»] chr3 (115 HSPs)
chr3 (38-171)||(7247864-7247999)
chr3 (34-171)||(2432943-2433082)
chr3 (34-171)||(41579724-41579863)
chr3 (30-168)||(29918337-29918477)
chr3 (30-168)||(29929363-29929503)
chr3 (30-168)||(29967490-29967630)
chr3 (30-168)||(29978517-29978657)
chr3 (33-171)||(6489267-6489403)
chr3 (32-172)||(42756092-42756234)
chr3 (41-172)||(41805682-41805815)
chr3 (41-171)||(46344871-46345003)
chr3 (33-168)||(52570565-52570701)
chr3 (33-171)||(4002504-4002643)
chr3 (33-113)||(2743391-2743472)
chr3 (56-171)||(6505973-6506090)
chr3 (33-164)||(41802939-41803072)
chr3 (28-171)||(48250863-48251008)
chr3 (26-171)||(600536-600683)
chr3 (35-172)||(11380374-11380513)
chr3 (37-172)||(46989480-46989617)
chr3 (33-168)||(55385074-55385211)
chr3 (8-68)||(1835234-1835294)
chr3 (34-168)||(19440193-19440329)
chr3 (8-68)||(41844267-41844327)
chr3 (33-138)||(19341593-19341700)
chr3 (39-148)||(49219796-49219907)
chr3 (30-171)||(52567697-52567840)
chr3 (98-172)||(55205270-55205345)
chr3 (32-168)||(30256001-30256139)
chr3 (65-165)||(66841-66942)
chr3 (33-113)||(9429848-9429929)
chr3 (33-109)||(24700718-24700795)
chr3 (33-113)||(34694433-34694514)
chr3 (28-84)||(35743576-35743632)
chr3 (33-111)||(34691620-34691699)
chr3 (28-94)||(36817515-36817582)
chr3 (89-171)||(51696571-51696654)
chr3 (33-79)||(2647698-2647744)
chr3 (28-172)||(14398468-14398614)
chr3 (33-79)||(34049108-34049154)
chr3 (33-79)||(43476220-43476266)
chr3 (33-79)||(48246440-48246486)
chr3 (33-79)||(54389823-54389869)
chr3 (67-171)||(55267375-55267481)
chr3 (30-83)||(14043894-14043947)
chr3 (33-168)||(45101847-45101984)
chr3 (26-79)||(46697739-46697792)
chr3 (33-148)||(49196448-49196565)
chr3 (33-105)||(49609384-49609457)
chr3 (34-78)||(13896876-13896920)
chr3 (57-171)||(19454348-19454464)
chr3 (33-169)||(20918010-20918148)
chr3 (33-169)||(20926972-20927110)
chr3 (27-79)||(50477208-50477260)
chr3 (55-113)||(13743286-13743345)
chr3 (33-111)||(13747718-13747796)
chr3 (31-168)||(28611097-28611236)
chr3 (55-172)||(41137651-41137770)
chr3 (33-84)||(41844363-41844414)
chr3 (33-80)||(44227139-44227186)
chr3 (33-79)||(4004802-4004848)
chr3 (33-144)||(7839500-7839611)
chr3 (55-171)||(14402991-14403109)
chr3 (59-171)||(23443131-23443245)
chr3 (28-74)||(30943222-30943268)
chr3 (33-79)||(43478829-43478875)
chr3 (98-168)||(43568863-43568933)
chr3 (33-79)||(49140846-49140892)
chr3 (26-84)||(49144448-49144506)
chr3 (59-171)||(50216879-50216993)
chr3 (26-79)||(42165191-42165244)
chr3 (33-172)||(55207662-55207803)
chr3 (30-78)||(2062415-2062463)
chr3 (58-113)||(2745229-2745285)
chr3 (36-84)||(3501897-3501945)
chr3 (28-84)||(3953209-3953265)
chr3 (28-84)||(6745320-6745376)
chr3 (28-84)||(8156531-8156587)
chr3 (23-79)||(8475854-8475910)
chr3 (97-172)||(32060276-32060352)
chr3 (26-70)||(36134267-36134311)
chr3 (33-94)||(36812848-36812911)
chr3 (35-79)||(42760210-42760254)
chr3 (33-76)||(36134354-36134397)
chr3 (35-74)||(41612399-41612438)
chr3 (98-171)||(44490341-44490413)
chr3 (36-79)||(48888768-48888811)
chr3 (55-113)||(50953295-50953354)
chr3 (33-72)||(51402397-51402436)
chr3 (33-79)||(2271312-2271358)
chr3 (33-79)||(2950394-2950440)
chr3 (26-84)||(2967917-2967975)
chr3 (26-68)||(4004885-4004927)
chr3 (33-79)||(6143699-6143745)
chr3 (110-172)||(7837525-7837587)
chr3 (33-79)||(16484455-16484501)
chr3 (8-42)||(35743503-35743537)
chr3 (64-168)||(43571715-43571821)
chr3 (33-79)||(46406590-46406636)
chr3 (26-80)||(47070495-47070549)
chr3 (33-79)||(49138642-49138688)
chr3 (34-103)||(49268845-49268915)
chr3 (33-79)||(54392027-54392073)
chr3 (33-74)||(1293410-1293451)
chr3 (26-79)||(4008315-4008368)
chr3 (30-79)||(11270280-11270329)
chr3 (110-171)||(44227063-44227124)
chr3 (34-83)||(50604420-50604469)
chr3 (24-72)||(4015119-4015167)
chr3 (33-85)||(10492872-10492924)
chr3 (33-85)||(16851145-16851197)
chr3 (35-79)||(34712760-34712804)
chr3 (39-83)||(45507402-45507446)
chr3 (38-82)||(46347725-46347769)
chr3 (55-94)||(50957687-50957727)
[»] scaffold0341 (1 HSPs)
scaffold0341 (28-113)||(17345-17431)
[»] scaffold0618 (1 HSPs)
scaffold0618 (41-171)||(3820-3951)
[»] scaffold0794 (1 HSPs)
scaffold0794 (33-171)||(5218-5345)
[»] scaffold0494 (3 HSPs)
scaffold0494 (33-113)||(824-905)
scaffold0494 (33-84)||(5354-5405)
scaffold0494 (28-72)||(892-936)
[»] scaffold0201 (1 HSPs)
scaffold0201 (33-113)||(22396-22477)
[»] scaffold0116 (2 HSPs)
scaffold0116 (33-112)||(15954-16034)
scaffold0116 (55-171)||(11235-11353)
[»] scaffold0219 (1 HSPs)
scaffold0219 (33-172)||(20111-20253)
[»] scaffold0169 (1 HSPs)
scaffold0169 (110-172)||(1723-1785)
[»] scaffold0361 (1 HSPs)
scaffold0361 (28-112)||(4394-4479)
[»] scaffold1379 (1 HSPs)
scaffold1379 (33-171)||(433-573)
[»] scaffold0184 (2 HSPs)
scaffold0184 (39-172)||(17964-18099)
scaffold0184 (26-76)||(18285-18335)
[»] scaffold0078 (2 HSPs)
scaffold0078 (39-172)||(54745-54880)
scaffold0078 (26-76)||(54509-54559)
[»] scaffold0192 (1 HSPs)
scaffold0192 (98-171)||(25886-25960)
[»] scaffold0176 (1 HSPs)
scaffold0176 (57-148)||(779-872)
[»] scaffold0744 (1 HSPs)
scaffold0744 (28-84)||(417-473)
[»] scaffold0360 (1 HSPs)
scaffold0360 (31-171)||(7301-7444)
[»] scaffold0180 (1 HSPs)
scaffold0180 (28-79)||(15616-15667)
[»] scaffold0012 (1 HSPs)
scaffold0012 (33-80)||(232831-232878)
[»] scaffold0199 (2 HSPs)
scaffold0199 (33-79)||(12387-12433)
scaffold0199 (33-79)||(10680-10726)
[»] scaffold0101 (2 HSPs)
scaffold0101 (33-79)||(36533-36579)
scaffold0101 (26-84)||(41014-41072)
[»] scaffold0038 (1 HSPs)
scaffold0038 (33-79)||(50075-50121)
[»] scaffold0065 (1 HSPs)
scaffold0065 (33-82)||(65343-65392)
[»] scaffold0513 (1 HSPs)
scaffold0513 (36-111)||(8194-8270)
[»] scaffold0293 (1 HSPs)
scaffold0293 (33-84)||(721-772)
[»] scaffold0014 (1 HSPs)
scaffold0014 (33-79)||(84608-84654)
[»] scaffold0634 (1 HSPs)
scaffold0634 (26-79)||(7446-7499)
[»] scaffold0260 (1 HSPs)
scaffold0260 (55-94)||(11792-11832)
[»] scaffold0016 (1 HSPs)
scaffold0016 (29-85)||(68400-68456)
[»] scaffold0011 (1 HSPs)
scaffold0011 (37-73)||(235933-235969)


Alignment Details
Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 8460093 - 8460307
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatatta 128  Q
    |||||||||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  8460093 tttctcggcagttaactaccgagattttccttggcagttaactgcagccgatttcaaattcctcggttgttaactaccgaggggacaaaaacgtatatta 8460192  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaattctctctttcctttgtcggttaactattcaattaactacactgcctcatgtccatgtttgt 228  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  8460193 ctcatgtgcctcagccttatagaatgtgtcaacagcaattctctctttcctttgtctgttacctattcaattaactacactgcctcatgtccatgtttgt 8460292  T
Q  229 tttagttatcgtgac 243  Q
    |||||||||||||||    
T  8460293 tttagttatcgtgac 8460307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 38690005 - 38689869
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||| |||| |||||||||||  ||||||||||| |||| |||| ||||| ||||||    
T  38690005 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttcgaattcctcgacatttaactaccgagggggtaaaagcgtattttactc 38689906  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||| | |||| ||||  ||||||||||||||||||    
T  38689905 atgtgacacagctttatgcaatgtgtcaacaacaatt 38689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 22345337 - 22345195
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    |||||||||||||||||||||||| |||  ||| |||||||||||||||| |||||||||||||| | ||||||| |||| ||   ||||||||| ||||    
T  22345337 tttctcggcagttaactaccgaggattttttcggcagttaactgcagccggtttcaaattcctcggcagttaactgccgatggaataaaaacgtaaatta 22345238  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||| |||||| |  |||||||||||||||||| | ||||||||    
T  22345237 ctcgtgtgccccgaccttatagaatgtgtcaatagcaattctc 22345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 41804037 - 41804169
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgt 135  Q
    |||||||||||||||| |||||||| ||||||||||||| || |||   ||||||||| | ||||||| |||| ||||||||| ||||| |||||  |||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgt 41804136  T
Q  136 gcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||||||||||||| ||||||||||||||||||    
T  41804137 gcctcagccttataaaatgtgtcaacaacaatt 41804169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 18975120 - 18975259
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    |||||||||||||||||| | |||||||  |||||||||||| ||  || | |||||||||||| ||||||  |||||||| ||||||||||| |||||     
T  18975120 tcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattttactt 18975219  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||| ||||||| ||||| |||||||||||||||||||||    
T  18975220 gtgtacctcagctttatacaatgtgtcaacaacaattctc 18975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 46141855 - 46141716
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactc 131  Q
    |||||||||||||||||| | |||||||| |||||||||||||||| || |  ||||||||| | ||||||| ||||| |||||||| ||||| |||||     
T  46141855 tcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattttactt 46141756  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||| ||||||||||||  ||| |||||||||||||||||    
T  46141755 gtgtacctcagccttatgcaatatgtcaacaacaattctc 46141716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 6562155 - 6562241
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  6562155 atttcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 6562241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 52802203 - 52802105
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattact 130  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||| ||||||||| ||| ||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaaaagtaaattact 52802105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 6557993 - 6557908
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||||||| | ||||||| ||||||||    
T  6557993 ttttctcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggg 6557908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 11183260 - 11183119
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattact 130  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||  | |||||||  | |||| |||||||||||| |||||    
T  11183260 ctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttact 11183161  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | | |  |||||||||||  ||||||||||||||||||||||    
T  11183160 cgtatttctcagccttatcaaatgtgtcaacaacaattctct 11183119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 44336327 - 44336251
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaact 104  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||| |||||||    
T  44336327 ttttctcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaact 44336251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 49924929 - 49924790
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    ||||||||||||| |||| | |||||||| |||||||||| ||||| |||   ||||  ||| | ||||| | |||| |||||||||||||| |||||||    
T  49924929 tcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattactc 49924830  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||||||||||||||||  |||||||||||||||||||||    
T  49924829 gtgtgcctcagccttatgcaatgtgtcaacaacaattctc 49924790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 44470010 - 44470091
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  44470010 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 44470091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 15047356 - 15047276
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg 112  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  15047356 ctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 15047276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 23276111 - 23276247
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatg 134  Q
    ||||||||||| ||||| |||||||| |||||||||| ||||| ||||  ||||||||  | ||||||| |||||||| ||||||||||| |||||| ||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtg 23276210  T
Q  135 tgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |  |||||||||||  |||| || |||||||||||||    
T  23276211 tttctcagccttatcaaatgcgtgaacaacaattctc 23276247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 6437539 - 6437678
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactc 131  Q
    ||||||| |||||||||||| |||||| |  |||||||||||| ||||| |  | ||||||| | ||||||| ||||| |||||||| ||||| |||||     
T  6437539 tcggcagataactaccgaggttttccttggtagttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattttactt 6437638  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||||||||||| ||||  |||||||||||||||||||||    
T  6437639 gtgtgcctcagctttatgcaatgtgtcaacaacaattctc 6437678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 36076555 - 36076693
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattac 129  Q
    |||||||||||| |||| ||||| |||||||| ||||||||||||||| | |||  |||||||||   |||||||||||| |||  ||||||||| ||||    
T  36076555 ttctcggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaaggggtaaaacgtattttac 36076654  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |  |||  |||||||||||  |||||||||||| |||||    
T  36076655 ttgtgtttctcagccttatgaaatgtgtcaacagcaatt 36076693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 29261492 - 29261352
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatat 126  Q
    |||||||| ||||||||||| |||| |||| ||| ||||||| |||||||||||| | |||| ||| || ||||||| |||||| ||||||||||||| |    
T  29261492 ttttctcgacagttaactactgaggttttcttcggcagttaattgcagccgattttacaatttctctacagttaactgccgaggaggcaaaaacgtattt 29261393  T
Q  127 tactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||  ||||| || |||||||  || |||||||||||||||    
T  29261392 tacttctgtgcatc-gccttatgaaacgtgtcaacaacaatt 29261352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 9711650 - 9711790
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgc-agccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    |||||||||||||| |||||| |||||||| ||||||||||| | | |||||| ||||||||| | ||||||| | || ||||||||| ||||| |||||    
T  9711650 ctcggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcgtattttact 9711749  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
      |||||| || ||||||  ||||||  |||||||||||||    
T  9711750 agtgtgccacaaccttatcaaatgtgggaacaacaattctc 9711790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 13972136 - 13971997
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    |||||| ||| | |||||||| |||||||| | |||||||||||||  |||  ||||||||| | || |||| |||| ||||||||||||||| |||||     
T  13972136 ctcggctgtttaataccgaggttttcctcggctgttaactgcagccagtttttaattcctcggcagt-aactgccgaaggggcaaaaacgtattttactt 13972038  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     |||  |||||||||||  ||||||||||||||||||||||    
T  13972037 gtgtttctcagccttatgaaatgtgtcaacaacaattctct 13971997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 49927512 - 49927652
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc-aaattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    |||| |||||||||||||||| ||| |||| |||||||||  ||||| |||  |||||| ||| | ||||||| |||||||| ||||||||||| |||||    
T  49927512 ctcgacagttaactaccgaggtttttctcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttact 49927611  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||  ||| ||| |||  |||||||||||||||||||||    
T  49927612 cgtgtttctcggccatatgaaatgtgtcaacaacaattctc 49927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 22346038 - 22346152
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgaggggcaaa-aacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||| |||||||||||||||| |||||||||||||| | |||   | |||||||| ||| |||||| ||||||  |||||||||||||||   |||    
T  22346038 tttcctcggcagttaactgcagccggtttcaaattcctcggcagtt---tgccgaggggaaaagaacgtaaattacttgtgtgcctcagccttaagcaat 22346134  T
Q  154 gtgtcaacaacaattctc 171  Q
    ||||||||| ||||||||    
T  22346135 gtgtcaacagcaattctc 22346152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 46973279 - 46973141
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatatta 128  Q
    |||||||||||||||||  |||| |||||||| |||||||||||||||| |||   ||||||||| | ||||||| || ||||| ||||| ||||| |||    
T  46973279 ttctcggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtatttta 46973181  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||  |||| |||||||| ||  ||||||||||||||||||    
T  46973180 cttgtgtgtctcagcctaatgaaatgtgtcaacaacaatt 46973141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 36072447 - 36072393
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  36072447 ttttttcggcagttaactaccgaggttttcctcggcagttaactgcagccgattt 36072393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 19054246 - 19054299
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  19054246 tttctcggcagttaactaccgaggttttccttggcagttaactgcagccgattt 19054299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 23359348 - 23359429
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||| |||||||||| ||||||||  |||||||||||||| |||||||||||||||| |  |||||| ||||||||    
T  23359348 ctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggg 23359429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 35521632 - 35521551
Alignment:
Q  88 ttcctcgactgttaactaccgag-gggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||||| | ||||||| ||||| |||||||| ||||| |||||  ||||||||||||||||| ||||||||||||||||||    
T  35521632 ttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaacaatt 35521551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 21944376 - 21944516
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatatt 127  Q
    |||||||| ||||||||| ||||| |||||||| ||  ||||||||||| | ||| ||||| |||||| |||| ||| |||||||  |||||||||| ||    
T  21944376 tttctcggtagttaactatcgaggttttcctcggcaactaactgcagccggtttttaaatttctcgacagttatctatcgaggggataaaaacgtatttt 21944475  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    | | ||||| | |||||||||   |||||||||||||||||    
T  21944476 atttatgtgtcccagccttatgatatgtgtcaacaacaatt 21944516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 36908627 - 36908515
Alignment:
Q  58 cctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttatagaatgt 155  Q
    ||||| |||||||||||||||| |||   ||||| ||||| ||||||| |||||| |||||||| |||| |||||  ||||||||| ||||||| |||||    
T  36908627 cctcggcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgt 36908528  T
Q  156 gtcaacaacaatt 168  Q
    ||||||| |||||    
T  36908527 gtcaacatcaatt 36908515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 1872104 - 1872041
Alignment:
Q  109 aggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||| | ||| |||||| ||||||||||||||||  ||||||||||||||||||||||    
T  1872104 aggggcaaaagcatattttactcgtgtgcctcagccttatgcaatgtgtcaacaacaattctct 1872041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 13173911 - 13173773
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatatta 128  Q
    |||||||||||||||| || ||| |||||||| | |||||||||||||| |||   ||||||  | | ||||||| |||||||| |||||  |||| |||    
T  13173911 ttctcggcagttaactgccaaggttttcctcggctgttaactgcagccggtttttgaattcccag-cagttaactgccgagggggcaaaatagtatttta 13173813  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||  ||||||||||||||||  ||||||||||||||||||    
T  13173812 cttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 13173773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 30910024 - 30910083
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  30910024 tttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagggg 30910083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 41453890 - 41453831
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  41453890 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgagggg 41453831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 8548661 - 8548719
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  8548661 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 8548719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 13636121 - 13636167
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  13636121 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 13636167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 26633600 - 26633467
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    |||||||||||||||||||| |||||||| |||||||||||| || | |||  ||||| |||   ||||   ||||| ||||||||| ||||| |||||     
T  26633600 tcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagtta---accgagggggcaaaagcgtattttactt 26633504  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||||||| ||||||  ||||||||||||||||||    
T  26633503 gtgtgcctcaaccttatgaaatgtgtcaacaacaatt 26633467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 51666660 - 51666774
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||  ||||||||||||||||||||| |||| |||| |  |||||| |||| ||||||||| ||||| |||||| |||| | |||| ||||  |||    
T  51666660 tttcctcagcagttaactgcagccgatttcgaattactcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagctttatgcaat 51666759  T
Q  154 gtgtcaacaacaatt 168  Q
    ||||||||| |||||    
T  51666760 gtgtcaacatcaatt 51666774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 3728816 - 3728763
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  3728816 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 3728763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 8459036 - 8458919
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||| ||||||||||||| || ||||||||||| || | ||||||| | ||||||  |||||||||| |||||| |||| | || |||||   |||    
T  8459036 tttcctcggcagttaactgcagtcggtttcaaattccacggcagttaacttctgaggggataaaaacgtattttactcgtgtgacacaaccttaagcaat 8458937  T
Q  154 gtgtcaacaacaattctc 171  Q
    ||||||||| ||||||||    
T  8458936 gtgtcaacatcaattctc 8458919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 19054101 - 19053996
Alignment:
Q  65 agttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaaca 162  Q
    ||||||||||||||| |||   ||||||||| | |||||||  ||||||| ||||||||||| |||||| |||  |||||||||||  ||||||||||||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgtcaaca 19054002  T
Q  163 acaatt 168  Q
    ||||||    
T  19054001 acaatt 19053996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 22524207 - 22524154
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||| ||||    
T  22524207 agattttctcggcagttaactaccgaggttttcctcgggagttaactgccgccg 22524154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 3944053 - 3943997
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  3944053 atttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 3943997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 3993837 - 3993893
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  3993837 atttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 3993893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 7981136 - 7981188
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||||| |||||||||||||| |||||||| ||||||| ||||||||||||    
T  7981136 ttctcggcggttaactaccgaggttttcctcggcagttaattgcagccgattt 7981188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 48751409 - 48751549
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| || |||||||||||| |||||  ||||||||| | ||| | | |||| |||| |||| ||||| |||||    
T  48751409 ctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttcagtgccgagggggtaaaatcgtattttact 48751508  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
      |||  |||||||||||  ||||||  |||| ||||||||    
T  48751509 agtgtttctcagccttatcaaatgtgggaacatcaattctc 48751549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 19499108 - 19499226
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggggcaaaaacgtatatta 128  Q
    |||||| ||||||||| || |||| |||||||| |||||||||||||||| |||| ||||| |||  | |||||||  ||| |||||||||||||| |||    
T  19499108 tttctctgcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcga-gggcaaaaacgtatttta 19499206  T
Q  129 ctcatgtgcctcagccttat 148  Q
    ||  |||| ||||| |||||    
T  19499207 cttgtgtgtctcagtcttat 19499226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 471086 - 471136
Alignment:
Q  24 gaagattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||| |||||||||||||||||| |||||| |||||||| |||||||||||    
T  471086 gaagtttttctcggcagttaactcccgaggttttcctcggcagttaactgc 471136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 1656088 - 1656138
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||    
T  1656088 ctcggcagttaactaccgaggtttttctcgacagttaactgcaggcgattt 1656138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 14172109 - 14172051
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||||||| ||||| |||||  ||||| |||||||||| |||||||||||||||||||    
T  14172109 ggggcaaaagcgtattttacttgtgtgcttcagccttatggaatgtgtcaacaacaatt 14172051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 19159697 - 19159651
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||    
T  19159697 ctcggcagttaactaccgaggttttccttggcagttaactgcagccg 19159651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 19161966 - 19161920
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  19161966 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccg 19161920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 27485107 - 27484993
Alignment:
Q  59 ctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtg 156  Q
    |||| |||||||||||||||| ||||  ||||||| | | ||||||| |||||||| ||||||||||| |||||| |||  |||||||||||  ||||||    
T  27485107 ctcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaatgtg 27485008  T
Q  157 tcaacaacaattctc 171  Q
      |||| ||||||||    
T  27485007 ggaacagcaattctc 27484993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 29622416 - 29622474
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||||||| || |||||||| |||| ||||    
T  29622416 agatttcctcggcagttaactaccgaggttttcctcggcaattaactgccgccggtttc 29622474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 46216472 - 46216422
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||||||    
T  46216472 ctcggcagttaactaccgaagttttcctcgatagttaactgcagccgattt 46216422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 46217317 - 46217367
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||||||    
T  46217317 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccgattt 46217367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 94417 - 94344
Alignment:
Q  98 gttaactaccgaggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||| |||| ||||||||||||   ||||||||||| | |||||||||  ||||||| |||||||||||||    
T  94417 gttaactgccgaagggcaaaaacgtcatttactcatgtggcacagccttatcaaatgtgtaaacaacaattctc 94344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 26879287 - 26879340
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| || |||||||||||||||||| |||||||| ||||||||||| ||||    
T  26879287 agatttccttggcagttaactaccgaggttttcctcggcagttaactgccgccg 26879340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 41909704 - 41909753
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    |||||||||||||| ||||   ||||||||||||||||||||||||||||    
T  41909704 ctcggcagttaactgccgaaattttcctcgccagttaactgcagccgatt 41909753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 50113385 - 50113320
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctc 93  Q
    ||||||||||||||||||||||||  |||||||| || |||||| |||||| | ||||||||||||    
T  50113385 ttttctcggcagttaactaccgagattttcctcggcaattaactacagccgaaattcaaattcctc 50113320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 13178127 - 13178231
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagc-cgatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatat 126  Q
    ||||||||||||||||||  ||||| |||||||  ||||||||||||||  | ||| ||||| |||  | ||||||| ||||||| |||||||||||| |    
T  13178127 ttttctcggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtattt 13178226  T
Q  127 tactc 131  Q
    |||||    
T  13178227 tactc 13178231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 15051349 - 15051393
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  15051349 cggcagttaactaccgaggttttcctcggcagttaactgccgccg 15051393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 20353929 - 20353985
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||| | |||||||| ||||||||||| |||| ||||    
T  20353929 atttcctcggcagttaactaccgaagttttcctcggcagttaactgccgccggtttc 20353985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 38771708 - 38771652
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||| |||| ||||    
T  38771708 atttcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttc 38771652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 50617279 - 50617213
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg---atttcaaattcctcgac 96  Q
    |||||||||||||| |||||| |||||| | ||||||||||||||||   ||||| |||||||||||    
T  50617279 ctcggcagttaactcccgaggttttccttgacagttaactgcagccggaaatttctaattcctcgac 50617213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 51288939 - 51288819
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||  |||||||||||||||| ||||| |||||||||   ||||||| |||||||| ||||||| || |||| || |||||| |||||||||  ||    
T  51288939 tttcctccgcagttaactgcagccggatttctaattcctcggtagttaactgccgagggggcaaaaacataaattattcgtgtgccacagccttatcaaa 51288840  T
Q  153 tgtgtcaacaacaattctctc 173  Q
    ||||  || | ||||||||||    
T  51288839 tgtgggaatagcaattctctc 51288819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 19159557 - 19159604
Alignment:
Q  11 tttttagaatgatgaagattttctcggcagttaactaccgaggctttc 58  Q
    ||||||||||||| ||||||| |||||||| |||||||||||| ||||    
T  19159557 tttttagaatgataaagatttcctcggcagataactaccgaggttttc 19159604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 29438020 - 29438159
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| | |||  |||   ||  | ||||||| |||| |||||||||||||| |||| ||    
T  29438020 tcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaacgtaaattattc 29438119  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||||| || ||||||  ||||||  |||||||||||||    
T  29438120 gtgtgccacaaccttatcaaatgtgggaacaacaattctc 29438159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 31783706 - 31783753
Alignment:
Q  25 aagattttctcggcagttaactaccgaggctttcctcgccagttaact 72  Q
    ||||||| |||||||||||||| |||||| |||||||| |||||||||    
T  31783706 aagatttcctcggcagttaactcccgaggttttcctcggcagttaact 31783753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 9710652 - 9710606
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||    
T  9710652 ctcggcagttaactcccgaagttttcctcggcagttaactgcagccg 9710606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 13633942 - 13633904
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaact 72  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  13633942 tcggcagttaactaccgaggttttcctcggcagttaact 13633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 29424454 - 29424408
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||    
T  29424454 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccg 29424408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 29425335 - 29425385
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||||| | ||||||||  ||||||||||| |||||||    
T  29425335 ctcggcagttaactaccgaagttttcctcggtagttaactgcaaccgattt 29425385  T

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Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 44598905 - 44598951
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||    
T  44598905 ctcggcagttaactcccgaagttttcctcggcagttaactgcagccg 44598951  T

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Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 1656159 - 1656220
Alignment:
Q  107 cgaggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||||||||||||| ||| |||||| |||  |||| ||||||  ||||||||||||||||||    
T  1656159 cgaggggcaaaaacatattttactcgtgtttctcaaccttatgaaatgtgtcaacaacaatt 1656220  T

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Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 2425677 - 2425730
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||  | |||||  ||||||||||||||||    
T  2425677 agatttcctcggcagttaactaccgagattctcctcagcagttaactgcagccg 2425730  T

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Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 3941149 - 3941194
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc 78  Q
    ||||||||||||||||||| | ||||||||  ||||||||||||||    
T  3941149 ctcggcagttaactaccgaagttttcctcggtagttaactgcagcc 3941194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 16270025 - 16270070
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||| |||||| |||| ||| ||||||||||||||||    
T  16270025 tcggcagttaactgccgaggttttcttcggcagttaactgcagccg 16270070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 161
Target Start/End: Original strand, 25040080 - 25040205
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattactcatgt 135  Q
    |||||||||||| ||| |||||||| || ||||||| |||| | ||| ||||| |||||| ||||||| ||| |||| |||||  |||| |||||  |||    
T  25040080 cagttaactaccaaggttttcctcgacaattaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaattgtattttacttgtgt 25040179  T
Q  136 gcctcagccttatagaatgtgtcaac 161  Q
    ||||| || ||||  |||||||||||    
T  25040180 gcctcggctttatgaaatgtgtcaac 25040205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 36911750 - 36911803
Alignment:
Q  114 caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaat 167  Q
    ||||||||||| ||||| ||  |||||||||||||  |||||||||||||||||    
T  36911750 caaaaacgtattttacttatccgcctcagccttatgaaatgtgtcaacaacaat 36911803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 38119614 - 38119651
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  38119614 gcagttaactaccgaggttttcctcggcagttaactgc 38119651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 47585670 - 47585621
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||| |||||||| |||||| ||||||||  |||||||||||||||||||    
T  47585670 tcggaagttaactgccgaggttttcctcggtagttaactgcagccgattt 47585621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 49857873 - 49857983
Alignment:
Q  58 cctcgccagttaactgcagccgatttc-aaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgt 155  Q
    ||||| |||||||||||||| |||||  |||||| ||| | ||||||| |||||||| ||   |||||| |||||  |||| |||| ||||||| |||||    
T  49857873 cctcggcagttaactgcagctgatttttaaattcatcggcagttaactgccgagggggcatttacgtattttact--tgtgtctcaaccttataaaatgt 49857970  T
Q  156 gtcaacaacaatt 168  Q
    |||||||||||||    
T  49857971 gtcaacaacaatt 49857983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 51271592 - 51271681
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgt 122  Q
    ||||||||||| ||||||| |||||||| || |||||||||||| |||||| ||  | ||| | ||||||| |||| |||||||||||||    
T  51271592 cggcagttaaccaccgaggttttcctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgt 51271681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 51289960 - 51290001
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgca 75  Q
    ||||||| |||||||||||| |||||||| ||||||||||||    
T  51289960 tcggcagctaactaccgaggttttcctcggcagttaactgca 51290001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 20349509 - 20349469
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcg 94  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  20349509 tttcctcggcagttaactgcagccggatttcaaattcctcg 20349469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 30905820 - 30905764
Alignment:
Q  58 cctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||| |||||||||||||||| |||||||||| |||| | ||||||| ||||||||    
T  30905820 cctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggg 30905764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 35527093 - 35527141
Alignment:
Q  112 ggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaa 160  Q
    ||||||||||||| |||||  ||||||||||||||||  ||||||||||    
T  35527093 ggcaaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtcaa 35527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 46886387 - 46886526
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||| | |||||||| || |||||| ||||| |||||| ||  | ||| | ||||||| |||| |||||||||||||   |||||    
T  46886387 ctcggcagttaactaccga-gttttcctcggcacttaactacagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcatttact 46886485  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||  | || ||||||  ||||||| |||||||||||||    
T  46886486 cgtgtagcacaaccttatcaaatgtgtaaacaacaattctc 46886526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 18606121 - 18605979
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||| | |||||||||| | | |||||||||||| ||||||||||||||| |||    
T  18606121 tttctcggcagttaagtaccgaggttttcctcggcagttaactgcagccggtgtcaaattcctaggcagttaactaccgagggggcaaaaacgtatttta 18606022  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||| ||||||||||||| ||| |||||||||||||||||||||    
T  18606021 ctcgtgtgcctcagcctcatacaatgtgtcaacaacaattctc 18605979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 2052615 - 2052721
Alignment:
Q  65 agttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaa 163  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||| |||||||||| |||||| |||||| ||||||    
T  2052615 agttaactgcagccgatttcaaattcctcgacagttaactgccgaggggacaaaaacgtaaattactcgtgtgcctcag-cttatacaatgtgccaacaa 2052713  T
Q  164 caattctc 171  Q
    ||||||||    
T  2052714 caattctc 2052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 2051098 - 2050962
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattactcatgt 135  Q
    |||| |||||||||||| |||||||| |||||||||||| ||| |||||||||| ||| | ||||||| ||| ||| |||||||||||| |||||| |||    
T  2051098 gcagataactaccgaggttttcctcggcagttaactgcaaccggtttcaaattcatcggcagttaactgccgaaggagcaaaaacgtattttactcgtgt 2050999  T
Q  136 gcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    || ||||||||||  |||||||||| | |||||||||    
T  2050998 gcatcagccttatgcaatgtgtcaatagcaattctct 2050962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 31768834 - 31768687
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgta 123  Q
    |||||| ||||||||||||||||||||| |||||||| || |||||||||||| |||||  ||||||||| | ||||||| |||| |||||||||| |||    
T  31768834 agatttcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaaaagta 31768735  T
Q  124 tattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||||||| |||  | |||||||||  ||||||  |||||||||||||    
T  31768734 aattactcgtgttacacagccttatcaaatgtgggaacaacaattctc 31768687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 11840242 - 11840390
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgta 123  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||| ||  | ||| | |||||||||| | ||||||||||| |     
T  11840242 agatttcctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttctaaaacttcggcagttaactaccaagggggcaaaaacatc 11840341  T
Q  124 tattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     ||||||| |||| | |||||||||  ||||||  ||||||||||||||    
T  11840342 aattactcgtgtgtcacagccttatgcaatgtgggaacaacaattctct 11840390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 16192845 - 16192750
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccga-ggggcaaaaacgtat 124  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||| ||| ||||| |||||| ||||||| |||| |||||||||||||||    
T  16192845 ttctcggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactgccgagggggcaaaaacgtat 16192750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 29286281 - 29286162
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaatt-cctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| |||||||||||| ||| ||||  ||| ||||| | |||||||||||||||| |||||||||| ||||||  ||||||||| ||||||  ||    
T  29286281 tttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgcaa 29286182  T
Q  153 tgtgtcaacaacaattctct 172  Q
    ||||||||||||||||||||    
T  29286181 tgtgtcaacaacaattctct 29286162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 13404632 - 13404770
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    |||||||||||||||| ||| ||||| || |||||||||||||| | || |  ||||||||||| |||||||||||| ||||||||  ||||| |||||     
T  13404632 tcggcagttaactaccaaggttttccacggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattttactt 13404731  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattct 170  Q
     |||||||| |||||||  ||||||| ||||||||||||    
T  13404732 gtgtgcctcggccttatgcaatgtgttaacaacaattct 13404770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 18610227 - 18610329
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||| ||||||| |||||||| |||||||||||||| |  |||||||||| |||||||||||||||| |||||| |||| | |||||||||| |||    
T  18610227 tttcctcggcagttaaatgcagccggtttcaaattcctcggcatttaactaccgaaggggcaaaaacgtattttactcgtgtgacacagccttatacaat 18610326  T
Q  154 gtg 156  Q
    |||    
T  18610327 gtg 18610329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 7361258 - 7361125
Alignment:
Q  40 gttaactaccgaggctttcctcgccagttaactgcagccgatttc-aaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgc 137  Q
    |||||||||||||| |||||||| |||||||||||||||| |||  ||| |||||  | ||||| | |||| ||| |||||||||| ||||||| |||||    
T  7361258 gttaactaccgaggatttcctcggcagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaaacgtaaattactcgtgtgc 7361159  T
Q  138 ctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||||||||  |||||||||||| ||||||||    
T  7361158 cacagccttatgcaatgtgtcaacagcaattctc 7361125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 13388707 - 13388788
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||| ||||| |||| | ||||||||||||||||    
T  13388707 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagttaactaccgagggg 13388788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 23958968 - 23958827
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatat 126  Q
    ||||||||||||||||||||||||| |||||||| || |||||||||||| | |||  |||| |||| | ||||||| |||||||| ||||||||||| |    
T  23958968 ttttctcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtattt 23958869  T
Q  127 tactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    || |   ||| |||||||||||   |||||||||||||||||    
T  23958868 tagttgggtgtctcagccttatcatatgtgtcaacaacaatt 23958827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 29076317 - 29076462
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtata 125  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||||| |||||| ||  | ||||| ||||||| ||| ||||||||||||||  |    
T  29076317 atttcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaa 29076416  T
Q  126 ttactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||  |||||| |||||||||  || |||  |||||||||||||    
T  29076417 ttacttgtgtgccacagccttatgcaacgtgggaacaacaattctc 29076462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 29109850 - 29109995
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtata 125  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||||| |||||| ||  | ||||| ||||||| ||| ||||||||||||||  |    
T  29109850 atttcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaa 29109949  T
Q  126 ttactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||  |||||| |||||||||  || |||  |||||||||||||    
T  29109950 ttacttgtgtgccacagccttatgcaacgtgggaacaacaattctc 29109995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 29111290 - 29111435
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtata 125  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||||| |||||| ||  | ||||| ||||||| ||| ||||||||||||||  |    
T  29111290 atttcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaa 29111389  T
Q  126 ttactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||  |||||| |||||||||  || |||  |||||||||||||    
T  29111390 ttacttgtgtgccacagccttatgcaacgtgggaacaacaattctc 29111435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 26712158 - 26712218
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  26712158 tagtttttagaatgatgaagattttctcggcagttaactaccgaggttttcttcggcagtt 26712218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 29065782 - 29065674
Alignment:
Q  65 agttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaaca 162  Q
    ||||||||||||||| ||||| ||||||||| | ||||||| |||||||| |||||| ||| ||||||| |||||| |||||||||  ||||||  ||||    
T  29065782 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29065683  T
Q  163 acaattctc 171  Q
    |||||||||    
T  29065682 acaattctc 29065674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 29074795 - 29074687
Alignment:
Q  65 agttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaaca 162  Q
    ||||||||||||||| ||||| ||||||||| | ||||||| |||||||| |||||| ||| ||||||| |||||| |||||||||  ||||||  ||||    
T  29074795 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29074696  T
Q  163 acaattctc 171  Q
    |||||||||    
T  29074695 acaattctc 29074687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 29079559 - 29079451
Alignment:
Q  65 agttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaaca 162  Q
    ||||||||||||||| ||||| ||||||||| | ||||||| |||||||| |||||| ||| ||||||| |||||| |||||||||  ||||||  ||||    
T  29079559 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29079460  T
Q  163 acaattctc 171  Q
    |||||||||    
T  29079459 acaattctc 29079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 29107368 - 29107260
Alignment:
Q  65 agttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaaca 162  Q
    ||||||||||||||| ||||| ||||||||| | ||||||| |||||||| |||||| ||| ||||||| |||||| |||||||||  ||||||  ||||    
T  29107368 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29107269  T
Q  163 acaattctc 171  Q
    |||||||||    
T  29107268 acaattctc 29107260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 31146447 - 31146375
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaact 104  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||| | |||||||    
T  31146447 ctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaact 31146375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 13479746 - 13479663
Alignment:
Q  86 aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||||| |||| |||||||||||||||| ||||| ||||| |||||  ||||||||||||||||  ||||||||||||||||||    
T  13479746 aattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 13479663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 28362723 - 28362802
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaact 104  Q
    |||||| ||| ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||| | |||||||    
T  28362723 agatttcctctgcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaact 28362802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 12783956 - 12784073
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    |||||||||||||||| |||| |||||||| ||| |||||||||||| || |  ||||| ||| | ||||||| |||| ||||||||| ||||| |||||    
T  12783956 ctcggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaattcatcggcagttaactgccgatggggcaaaagcgtattttact 12784055  T
Q  131 catgtgcctcagccttat 148  Q
      ||||||||||||||||    
T  12784056 tgtgtgcctcagccttat 12784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 29061338 - 29061230
Alignment:
Q  65 agttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaaca 162  Q
    ||||||||||||||| ||||| ||||||||| | ||||||| |||| |||||||||| ||| ||||||| |||||| |||||||||  ||||||  ||||    
T  29061338 agttaactgcagccgaatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatgtaatgtgggaaca 29061239  T
Q  163 acaattctc 171  Q
     ||||||||    
T  29061238 ccaattctc 29061230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 26712122 - 26712071
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  26712122 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccgatttc 26712071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 6204901 - 6204855
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  6204901 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 6204855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 11691868 - 11691822
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  11691868 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 11691822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 22305182 - 22305136
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  22305182 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 22305136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 168
Target Start/End: Original strand, 32643523 - 32643657
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcat 133  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||| | | ||||||| |||||| ||||   |||||| |||||  |    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccgaggaggcatttacgtattttacttgt 32643622  T
Q  134 gtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    | || ||| ||||||  ||||||| ||||||||||    
T  32643623 gggcttcaaccttatgaaatgtgtgaacaacaatt 32643657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 13382703 - 13382652
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  13382703 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 13382652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 25141132 - 25141219
Alignment:
Q  86 aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||||||| ||||||| ||||  || ||||||  || |||| || ||||||||||||||||  ||||||||||||||||||||||    
T  25141132 aattcctcgacagttaactgccgaatggacaaaaatataaattattcgtgtgcctcagccttatgcaatgtgtcaacaacaattctct 25141219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 27616796 - 27616738
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||| ||| ||||||||||| |||| ||||    
T  27616796 agatttcctcggcagttaactaccgaggttttcttcggcagttaactgccgccggtttc 27616738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 28249959 - 28249913
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  28249959 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 28249913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 32026096 - 32026042
Alignment:
Q  114 caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||||||||| |||||  ||||||||||||||||  ||||||||||||||||||    
T  32026096 caaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 32026042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 7537240 - 7537159
Alignment:
Q  65 agttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagcc 144  Q
    ||||||||||||||| |||   |||||||||||  |||||| |||||||| |||||||||| ||||||| ||||||||||||    
T  7537240 agttaactgcagccggttttttaattcctcgacaattaactgccgagggggcaaaaacgtaaattactcgtgtgcctcagcc 7537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 13401529 - 13401420
Alignment:
Q  64 cagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaac 161  Q
    ||||||||||||||||||||   ||||||||| | ||||||| |||||||| ||||| | ||| | |||| |||  |||| ||||||| |||||||||||    
T  13401529 cagttaactgcagccgattttttaattcctcggcagttaactgccgagggggcaaaagcatatttaactcgtgttactcaaccttataaaatgtgtcaac 13401430  T
Q  162 aacaattctc 171  Q
    | ||||||||    
T  13401429 atcaattctc 13401420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 11694026 - 11694074
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgat 81  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||||    
T  11694026 ctcggcagttaactaccgaggttttcctcggcaattaactgccgccgat 11694074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 18351643 - 18351683
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  18351643 tcggcagttaactaccgaggttttcctcggcagttaactgc 18351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 14012374 - 14012513
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    ||||| |||||||| |||| | |||||||| |||||||||| ||||| ||||| ||  | ||| | ||||||| | || ||||||||||||   ||||||    
T  14012374 ctcggtagttaactgccgatgttttcctcggcagttaactgaagccggatttctaaaacttcggcagttaactgctgaagggcaaaaacgtcatttactc 14012473  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | |||||||||  ||||||  |||||||||||||    
T  14012474 gtgtggcacagccttattaaatgtgggaacaacaattctc 14012513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 18347093 - 18347034
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| ||||||||||||||| ||||||| |||||||| | ||||||| ||||||||    
T  18347093 tttcctcggcagttaactgcagccggatttcagattcctcggcagttaactgccgagggg 18347034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 26351086 - 26351141
Alignment:
Q  24 gaagattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||| ||| |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  26351086 gaagttttcctcggcagttaactcccgaggttttcctcggcagttaactgccgccg 26351141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 6207059 - 6207105
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  6207059 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 6207105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 9048149 - 9048103
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||    
T  9048149 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccg 9048103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 9049083 - 9049129
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||    
T  9049083 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccg 9049129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 26712223 - 26712273
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  26712223 tcggtagttaactaccgaggttttcctcggcagttaactgccgccggtttc 26712273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 31771740 - 31771786
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||||||    
T  31771740 ctcggcaattaactaccgagattttcctcggcagttaactgcagccg 31771786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 32223512 - 32223562
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||||| | ||||||||   ||||||||||||||||||    
T  32223512 ctcggcagttaactaccgaagttttcctcggtggttaactgcagccgattt 32223562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 15888796 - 15888845
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||| ||||||||  | |||||||| ||||||||||||||||    
T  15888796 tttctcggcagtaaactaccgcagttttcctcggcagttaactgcagccg 15888845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 17338760 - 17338813
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||| | |||| | |||||||| ||||||||||||||| ||||    
T  17338760 tttctcggcagttaattgccgaagttttcctcggcagttaactgcagccaattt 17338813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 30258315 - 30258364
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||| |||||  |||||||| |||||||||||||| |||||    
T  30258315 tcggcagttaactgccgagattttcctcgacagttaactgcagctgattt 30258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 31501694 - 31501617
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaa-attcctcgactgttaactaccga 109  Q
    ||||| |||||||| |||||| ||||||||  || |||||||||||| ||| ||  ||||||||| ||||||||||||    
T  31501694 ctcggtagttaactgccgaggttttcctcggtagataactgcagccggttttaattttcctcgacagttaactaccga 31501617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 24721962 - 24721998
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||||||||||||| |||||||| |||||||||||    
T  24721962 cagttaactaccgaggttttcctcggcagttaactgc 24721998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 25184829 - 25184968
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||| | || ||||||||||||||| ||||||    
T  25184829 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttcaaattcctcgacagttaactgctgagggggcaaaaacgtattttactc 25184928  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||||||||| ||||||  ||| |||||||||||||||||    
T  25184929 gtgtgcctcaaccttatgcaatctgtcaacaacaattctc 25184968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 435419 - 435280
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    |||||||||||| ||||| ||||| ||||||||  |||| ||||||||||||||||||||| ||| | ||||||| || | |||||||||||||| ||||    
T  435419 tttctcggcagtcaactatcgaggttttcctcggtagtttactgcagccgatttcaaattcatcggcagttaactgccaagggggcaaaaacgtaaatta 435320  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||| |||||||||| |||||| | ||||||||||||||||    
T  435319 ctcgtgtgcctcagtcttatacagtgtgtcaacaacaatt 435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 41008924 - 41009072
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatatta 128  Q
    |||||||||||||||||||||| | |||||||| ||||||| |||||||| || ||||||||||| | ||||||| |||||| |||||||||||| ||||    
T  41008924 tttctcggcagttaactaccgaagttttcctcggcagttaaatgcagccggttacaaattcctcggcagttaactgccgaggaggcaaaaacgtaaatta 41009023  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaattctctctttc 177  Q
    ||| |||| ||| | |||||  ||||||||||  |||||||||| ||||    
T  41009024 ctcgtgtgtctcggtcttatcaaatgtgtcaatgacaattctctttttc 41009072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 41004602 - 41004464
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||| | |||  ||| |||||||||||||||| || ||||||||||| | ||||||| ||||||  ||||||||||| |||||||    
T  41004602 ctcggcagttaactaccgaagtttttttcggcagttaactgcagccggttacaaattcctcggcagttaactgccgaggaagcaaaaacgtaaattactc 41004503  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattct 170  Q
     | ||| ||||||||||| |||||||||||||| |||||    
T  41004502 gtatgcatcagccttatacaatgtgtcaacaacgattct 41004464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 82265 - 82401
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgt 135  Q
    |||||||||||| |||| |||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||   ||||||||||| |||||| |||    
T  82265 gcagttaactacggaggttttcctcgacagttaactgcagccggtttcaaattactcgacagttaactaccgaggaaacaaaaacgtattttactcgtgt 82364  T
Q  136 gcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | |  | ||||||  ||||||||||||||||| ||||    
T  82365 gacataaccttatgcaatgtgtcaacaacaatcctct 82401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 35493341 - 35493481
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    ||||||||||||||||||   |||||||| |||||||||||||| | |||   ||||||||| | |||||||||||||||| ||||| ||||| ||||||    
T  35493341 tcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttactc 35493440  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     |||| |||| ||||||  ||||||||||||||||||||||    
T  35493441 gtgtgtctcaaccttatgcaatgtgtcaacaacaattctct 35493481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 34921756 - 34921886
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattac 129  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||| | |||  |||| |||| | ||||||||||| ||||||||||||||| ||||    
T  34921756 ttctcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaactaccggggggcaaaaacgtattttac 34921855  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaa 160  Q
    || |||  ||| |||||||  ||||||||||    
T  34921856 tcgtgtttctctgccttatgaaatgtgtcaa 34921886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 28342597 - 28342460
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||| ||  |||||||| ||||||| |||||||| |||   ||||| ||||| ||||||| |||| |||||||||||||| ||||||    
T  28342597 ctcggcagttaactaccaagaatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaattact 28342498  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||| || ||||||||  ||||||||||||||||||    
T  28342497 tatgtgtcttagccttatgcaatgtgtcaacaacaatt 28342460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 2917752 - 2917620
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgt 135  Q
    ||||||||||| |||| |||||||| |||||||||| ||||| |||   |||| |||| | ||||||| |||||||| ||||||||||| |||||  |||    
T  2917752 cagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgt 2917653  T
Q  136 gcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||||||||||||  ||||||||||||||||||    
T  2917652 gcctcagccttatgaaatgtgtcaacaacaatt 2917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 7189943 - 7190090
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtat 124  Q
    |||||| ||||||||||||||||||| | |||||||| ||||||||||||||| |||||| ||  | ||| | ||||||| ||||||||||||||||||     
T  7189943 agatttcctcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggggcaaaaacgtaa 7190042  T
Q  125 attactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     |||||| |||| | || ||||||  ||||||  |||| |||||||||    
T  7190043 tttactcgtgtggcacaaccttatgtaatgtgggaacatcaattctct 7190090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 3795411 - 3795330
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||||||| || ||| |||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  3795411 ctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagggg 3795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 41053690 - 41053807
Alignment:
Q  56 ttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||||||||||||||||||| ||||  |||| || ||| |||||||  ||||| |||||||||||| |||||||  |||||||||||||||  |||    
T  41053690 ttcctcgccagttaactgcagccggtttcttaatttctggacagttaactgtcgaggaggcaaaaacgtaaattactcgcgtgcctcagccttatgtaat 41053789  T
Q  154 gtgtcaacaacaattctc 171  Q
    ||||||||| ||||||||    
T  41053790 gtgtcaacagcaattctc 41053807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 41183223 - 41183350
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactca 132  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||| | ||||| | |||||||            |||||||     
T  41183223 ctcggcagttaactaccgaggttttcctcggtagttaactgcagccggtttcaaattcttcggcagttaattgccgaggg-----------aattactcg 41183311  T
Q  133 tgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  41183312 tgtgcctcagccttatacaatgtgtcaacagcaattctc 41183350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 41500233 - 41500373
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||| |||||  ||||| | ||  ||||||| |||| ||||||||| ||||| |||||    
T  41500233 ctcggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattctttgatagttaactgccgagggggcaaaagcgtattttact 41500332  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||  ||||||| |||  |||||||||||| ||||||||    
T  41500333 cgtgtttctcagccatatgaaatgtgtcaacatcaattctc 41500373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 45475516 - 45475377
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    ||||||| ||||||||||||||| |||||||| |||||||||| |||| | |||  |||| |||| | ||||||| |||| ||||||||| ||||| |||    
T  45475516 ttctcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtatttta 45475417  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||  |||| |||||||||||  |||||||||||| |||||    
T  45475416 cttgtgtgtctcagccttatgaaatgtgtcaacatcaatt 45475377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 27276368 - 27276514
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtata 125  Q
    |||| ||||||| |||||| |||||| |||||||| ||||||||||||||| |||||||||||||||  | ||||||| |||| |||| |||| |||||     
T  27276368 atttcctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtatt 27276467  T
Q  126 ttactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||  |||| | |||||||||   |||||  ||||||||||||||    
T  27276468 ttactagtgtggcacagccttatcacatgtgggaacaacaattctct 27276514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 41181457 - 41181371
Alignment:
Q  86 aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||| | ||||||| |||||||| ||||||||||| |||||| ||||||||||||||||  |||||||||||| ||||||||    
T  41181457 aattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgcaatgtgtcaacatcaattctc 41181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 41497540 - 41497406
Alignment:
Q  39 agttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtg 136  Q
    ||||||||||||||| |||||||| || ||||||||||||| |||   ||||| ||| | ||||| |  ||||| |||||||||||| ||||||| ||||    
T  41497540 agttaactaccgaggttttcctcggcaattaactgcagccggtttttgaattcttcggcagttaagtgtcgaggtggcaaaaacgtaaattactcgtgtg 41497441  T
Q  137 cctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||||||  |||||||||| | ||||||||    
T  41497440 cctcagccttatgcaatgtgtcaagagcaattctc 41497406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 9660054 - 9660195
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattact 130  Q
    ||||||| ||||||||| ||| |||||||| |||| ||||||||||| || |   |||||||| | ||||||| ||||| ||||||||| ||| ||||||    
T  9660054 ctcggcaattaactaccaaggttttcctcggcagtcaactgcagccggttattgtattcctcggcagttaactgccgagagggcaaaaaagtaaattact 9660153  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | ||| ||||||| ||||  |||||||||||| |||||||||    
T  9660154 cgtgtacctcagctttatgcaatgtgtcaacagcaattctct 9660195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 3943186 - 3943330
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatat 126  Q
    |||| ||||||||||||||||||||| ||| |||| ||||||||||||||| |||||| ||  | ||| | ||||||| |||||| ||||||||||   |    
T  3943186 atttcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggagcaaaaacgtcatt 3943285  T
Q  127 tactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||| |||| |  ||||||||  ||||||  |||||||||||||    
T  3943286 tactcgtgtggcatagccttatctaatgtgggaacaacaattctc 3943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 19187219 - 19187339
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagc-cgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatt 127  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||| |  |||||  |||| |||| | ||||||| |||| ||||||||||||||| ||    
T  19187219 tttctcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtatttt 19187318  T
Q  128 actcatgtgcctcagccttat 148  Q
    |||  |||| |||||||||||    
T  19187319 acttgtgtgtctcagccttat 19187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 23346854 - 23346714
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||| |||||  ||  | ||| | ||||||| |||| ||||||||||||   ||||||    
T  23346854 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttataaaacttcggcagttaactgccgaagggcaaaaacgtcatttactc 23346755  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     |||| | || ||||||  ||||||| ||||||||||||||    
T  23346754 gtgtggcacaaccttatcaaatgtgtaaacaacaattctct 23346714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 25964892 - 25964738
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctc-------gactgttaactaccga-ggggcaa 116  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||       ||| ||||||| |||| |||||||    
T  25964892 agattttctcggctattaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcggtccttgacggttaactgccgagggggcaa 25964793  T
Q  117 aaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    || ||||| |||||| |||  |||||||||||  ||||||  |||||||||||||    
T  25964792 aatcgtattttactcgtgtttctcagccttatcaaatgtgggaacaacaattctc 25964738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 23347327 - 23347466
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    ||||||||||| ||||||||| ||||||||  |||||||||||||| |||||| ||  | ||| | ||||||| |||| ||||||||||||   ||||||    
T  23347327 ctcggcagttagctaccgaggttttcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcaaaaacgtcatttactc 23347426  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | |||||||||  ||||||| |||| ||||||||    
T  23347427 gtgtggcacagccttatcaaatgtgtaaacagcaattctc 23347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 24601713 - 24601636
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||| | ||| |||||||||||| ||||||||||||    
T  24601713 ctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24601636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 24612401 - 24612478
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||| | ||| |||||||||||| ||||||||||||    
T  24612401 ctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24612478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 1149533 - 1149405
Alignment:
Q  46 taccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattactcatgtgcctcagc 143  Q
    |||||||| |||||||| ||||||||||||  || ||||||||||||||| | ||||||| ||||||| |||||| ||||| |||||  |||| | || |    
T  1149533 taccgaggttttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttactagtgtggcacaac 1149434  T
Q  144 cttatagaatgtgtcaacaacaattctct 172  Q
    |||||  ||||||  ||||||||||||||    
T  1149433 cttatcaaatgtgggaacaacaattctct 1149405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 8268749 - 8268885
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaa-attcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    ||||||||||||| |||||| ||| ||||  |||||| ||||||||||||    ||||||  || ||||||| |||||||| ||||| ||||| |||||     
T  8268749 tcggcagttaactgccgaggtttttctcgatagttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtattttacta 8268848  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||| | |||| |||||| ||||||||||||||||||    
T  8268849 atgtacgtcagtcttataaaatgtgtcaacaacaatt 8268885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 28472060 - 28472123
Alignment:
Q  11 tttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||| |||  ||||||||||    
T  28472060 tttttagaatgatgaagatttcctcgacagttaactaccgaggttttcttcggtagttaactgc 28472123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 41053567 - 41053618
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  41053567 ctcggcagttaactaccgatgatttcctcgccagttaactgcagccggtttc 41053618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 43943763 - 43943676
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggggcaaaaa 119  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||| || | |||||||||||  ||||||| | |||||| |||||    
T  43943763 ctcggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcgagagttaactgctgagggggaaaaa 43943676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 1096647 - 1096533
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| ||||||||||||||| |||||||||||||||| | ||||||  |||| ||||||||| ||||| |||||  |||||| || ||||||  ||    
T  1096647 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttactagtgtgccacaaccttatcaaa 1096548  T
Q  153 tgtgtcaacaacaat 167  Q
    ||||  |||||||||    
T  1096547 tgtggaaacaacaat 1096533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 17424206 - 17424160
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  17424206 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 17424160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 28468722 - 28468664
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  28468722 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 28468664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 43982273 - 43982227
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  43982273 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 43982227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 23409501 - 23409637
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactc 131  Q
    ||||||||| ||| |||||| |||||||| ||||||||||||||| | |||  ||||||||| |  |||||| ||||| |||||||  ||||| |||||     
T  23409501 tcggcagtttacttccgaggttttcctcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaacgcgtattttacta 23409600  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||| ||||||||||  || ||||| |||||||||    
T  23409601 gtgtgcatcagccttatgtaacgtgtccacaacaatt 23409637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 34639309 - 34639453
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatat 126  Q
    |||||||||||||||||| |||| | |||||||  ||||||||||||||| |||||  |||| |||| | |||| || |||| |||||||||| ||| ||    
T  34639309 ttttctcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaaagtaaat 34639408  T
Q  127 tactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||  |||| | |||||||||  ||||||  |||| ||||||||    
T  34639409 tactagtgtggcacagccttatcaaatgtgggaacatcaattctc 34639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 16580538 - 16580479
Alignment:
Q  112 ggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||| |||| |||||| |||| |||||||||||  |||||||||||||||||||||    
T  16580538 ggcaaaaatgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaattctc 16580479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 22003400 - 22003451
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  22003400 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 22003451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 24607589 - 24607708
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgaggggcaaaaa-cgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| |||||||||||||||| |||   || || ||| | ||||||| | |||||| ||||| |||| |||||   ||||||||||||||||  ||    
T  24607589 tttcctcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgagggggaaaaaacgtaaattacctgtgtgcctcagccttatgcaa 24607688  T
Q  153 tgtgtcaacaacaattctct 172  Q
    ||||||||||||||||||||    
T  24607689 tgtgtcaacaacaattctct 24607708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 28477069 - 28477112
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  28477069 ggcagttaactaccgaggttttcctcggcagttaactgcagccg 28477112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 38945814 - 38945755
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| |||||||||||||||| ||||||||||||||| | ||||||| ||||||||    
T  38945814 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 38945755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 41053630 - 41053681
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  41053630 ctcgccagttaactaccaaggatttcctcgccagttaactgcagccggtttc 41053681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 43536183 - 43536136
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactg 73  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  43536183 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 43536136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 43950244 - 43950380
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactca 132  Q
    ||||||||||||| ||| |  |||||||| ||||||| ||||| || |||  |||||| |  | ||||||| |||||||| |||||| |||| ||||||     
T  43950244 tcggcagttaactcccgcg--tttcctcggcagttaattgcagtcggttttgaattccacagcagttaactgccgagggggcaaaaatgtattttactcg 43950341  T
Q  133 tgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||  |||||||||||  ||||||||||||||| |||||    
T  43950342 tgtttctcagccttatcaaatgtgtcaacaacagttctc 43950380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 10825299 - 10825201
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgt 122  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||  ||||||| |||||| ||  | |||   ||||||||||||||| ||||||||||    
T  10825299 agattttctcggcagttaactgccgaggttttcctcgacagttaggtgcagccggatttctaaaacttcggtagttaactaccgagggagcaaaaacgt 10825201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 17420649 - 17420591
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| ||| |||| ||||||||||| |||| ||||    
T  17420649 agatttcctcggcagttaactaccgaggattttctcggcagttaactgccgccggtttc 17420591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 24754023 - 24754085
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcg 94  Q
    |||||||||| | |||||||| ||||||||  ||||||||||||||| |||||||||||||||    
T  24754023 ctcggcagtttattaccgaggttttcctcggtagttaactgcagccgaatttcaaattcctcg 24754085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 41052688 - 41052614
Alignment:
Q  99 ttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||| |||||||| |||||||||| ||||||  ||||| ||||||||||  ||| ||||||||||||||||||    
T  41052688 ttaactgccgaggggacaaaaacgtaaattacttgtgtgcatcagccttatgcaatatgtcaacaacaattctct 41052614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 43491185 - 43491111
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaact 104  Q
    ||||||||||||||||||| ||| |||||||| ||||||| |||||||| || | |||||||||| | |||||||    
T  43491185 ttctcggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggcagttaact 43491111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 7263096 - 7263047
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagc 77  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||||||    
T  7263096 atttcctcggcagttaactcccgaggatttcctcggcagttaactgcagc 7263047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 12905597 - 12905492
Alignment:
Q  59 ctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgaggggcaaaaa-cgtatattactcatgtgcctcagccttatagaatgtg 156  Q
    |||| ||||||||||||||||| |||  |||| |||| | ||||||| |||||||| ||||| ||||| |||||| |||  |||||||||||  ||||||    
T  12905597 ctcggcagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgtattttactcttgtttctcagccttatgaaatgtg 12905498  T
Q  157 tcaaca 162  Q
    ||||||    
T  12905497 tcaaca 12905492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 2271733 - 2271785
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    ||||||||||||||||| |||| | |||||||| |||||||||||||| ||||    
T  2271733 tttctcggcagttaactgccgaagttttcctcgacagttaactgcagctgatt 2271785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 2983472 - 2983420
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaa 87  Q
    |||||||||||| |||||| ||||||||  |||||||||||||||||| ||||    
T  2983472 cggcagttaactgccgaggttttcctcggtagttaactgcagccgattccaaa 2983420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 5351726 - 5351770
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaact 72  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||    
T  5351726 atttcctcggcagttaactaccgaggttttcctcggcagttaact 5351770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 12908426 - 12908478
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||| | ||| |||||||| ||||||||||||||| ||||    
T  12908426 ttctcggcagttaactatcaaggttttcctcggcagttaactgcagccaattt 12908478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 18000311 - 18000255
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| |||| |||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  18000311 atttcctcgccagttaactaccgaggttttcctcggcagttaactgccgccggtttc 18000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 30493440 - 30493384
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    |||||| ||||||||||||||||||||  |||||||| ||||||||| | |||||||    
T  30493440 agatttcctcggcagttaactaccgagattttcctcggcagttaactaccgccgatt 30493384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 31974246 - 31974298
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    |||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  31974246 ctcggcagttaactgccgagattttcctcggtagttaactgcagccgatttca 31974298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 44100792 - 44100848
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  44100792 atttcctcggtagttaactaccgaggttttcctcggcagttaactgccgccggtttc 44100848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 3803564 - 3803619
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||    
T  3803564 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 3803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 20951069 - 20951128
Alignment:
Q  57 tcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggggca 115  Q
    |||||| |||||||||||||||| ||||||||||||||| | ||||||| |||| |||||    
T  20951069 tcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaagggca 20951128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 29397984 - 29397941
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  29397984 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 29397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 39798522 - 39798471
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  39798522 atttcctcggcagttaactcccgaggatttcctcggcagttaactgccgccg 39798471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 3937851 - 3937897
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||||| || ||||| ||||||||||||||||    
T  3937851 ctcggcagttaacttccgaggtttacctcggcagttaactgcagccg 3937897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 14456576 - 14456530
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||||||    
T  14456576 ctcggtagttaactgccgaggttttcctcggcagttaactgcagccg 14456530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 26543989 - 26544039
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||||||||||||||||| |||||||   ||||||||||||||| ||||    
T  26543989 tcggcagttaactaccgaggttttcctcagtagttaactgcagccggtttc 26544039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 30273149 - 30273195
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  30273149 ctcggcaattaactaccgaggttttcctcggcagttaactgtagccg 30273195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 33222690 - 33222644
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||    
T  33222690 ctcggcagttaactgccgaagttttcctcggcagttaactgcagccg 33222644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 42499860 - 42499814
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  42499860 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 42499814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 3935937 - 3935896
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||||||| |||||||| || ||||||||    
T  3935937 ctcggcagttaactaccgaggttttcctcggcacttaactgc 3935896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 7267436 - 7267489
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||  |||||| | ||||||||||| ||||    
T  7267436 agatttcctcggcagttaactaccgagattttccttggcagttaactgccgccg 7267489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 23786202 - 23786081
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatat 126  Q
    ||||||||||||||||||||||| | ||| |||  || |||||||  ||| |||||  ||||||||| | ||||||| |||||||| ||||| | ||| |    
T  23786202 ttttctcggcagttaactaccgaagattttctcaacaattaactgtcgccggatttttaattcctcggcagttaactgccgaggggacaaaatcatattt 23786103  T
Q  127 tactcatgtgcctcagccttat 148  Q
    |||| ||||  |||||||||||    
T  23786102 tactaatgtttctcagccttat 23786081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 39947680 - 39947627
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||| ||||||||||||||| | |||||||| ||||||||||| ||||    
T  39947680 agatttcctctgcagttaactaccgaagttttcctcggcagttaactgccgccg 39947627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 40221130 - 40221175
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||| |||||| ||||||||  |||||||||||||||    
T  40221130 tcggcagttaactgccgaggttttcctcggtagttaactgcagccg 40221175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 43984301 - 43984346
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||||||| |||||||| || |||||||| ||||    
T  43984301 tcggcagttaactaccgaggttttcctcggcacttaactgccgccg 43984346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 24512241 - 24512101
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagc-cgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||  ||| || |||||||||||  | |||  |||||||| || |||||||  ||| |||| |||||||||| |||||    
T  24512241 ctcggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaattcctcaacagttaactgtcgagggggtaaaaacgtattttact 24512142  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
      |||  ||||||| |||  |||||||||| | ||||||||    
T  24512141 tgtgtttctcagccatatgaaatgtgtcaagagcaattctc 24512101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 30271143 - 30271071
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    |||||||||||||| | |||||||  ||||||||||||||| |||||  |||||||| ||  |||||||||||    
T  30271143 cagttaactaccgaagttttcctcagcagttaactgcagccggatttttaattcctcaacctttaactaccga 30271071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 41564498 - 41564542
Alignment:
Q  40 gttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||    
T  41564498 gttaactaccgaggttttcctcggcagttaactgccgccggtttc 41564542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 45137433 - 45137549
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactc 131  Q
    |||||||||||||| ||| | |||| ||| |||||||||||||||| ||||  ||||||||| |  |||||| || ||| ||||||| ||||| ||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttactc 45137532  T
Q  132 atgtgcctcagccttat 148  Q
     |||   ||||||||||    
T  45137533 gtgtttatcagccttat 45137549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 47061003 - 47060860
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||||||||  ||||||||||| ||||||| |||| ||||||||||||||| |||    
T  47061003 tttctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttgaattcctcgacagttaactgccgagggggcaaaaacgtatttta 47060904  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||  | ||||||||||||||  ||| ||||||||| ||||||||    
T  47060903 cttgtatgcctcagccttatgaaatatgtcaacaataattctct 47060860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 19044367 - 19044228
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    ||||||||||||||||||| | |||||||| || |||||||||| || |||||||||||||| |  |||||| ||||| |  ||||||||||| ||||||    
T  19044367 ctcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttcaaattcctcggcaattaactgccgagtgaacaaaaacgtattttactc 19044268  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||||||||  ||||||||||||| |||||||    
T  19044267 atgtgcctcagccttatgcaatgtgtcaacaataattctc 19044228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 20710269 - 20710408
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    ||||||||||||||||||| | |||||||| || |||||||||| || |||||||||||||| |  |||||| ||||| |  ||||||||||| ||||||    
T  20710269 ctcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttcaaattcctcggcaattaactgccgagtgaacaaaaacgtattttactc 20710368  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||||||||  ||||||||||||| |||||||    
T  20710369 atgtgcctcagccttatgcaatgtgtcaacaataattctc 20710408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 41049196 - 41049328
Alignment:
Q  41 ttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactcatgtgcct 139  Q
    ||||||||||||| |||||||| ||||||||||||||||||| |  ||||| ||||| |||||||||||| |  ||||| ||||| ||||| |||||| |    
T  41049196 ttaactaccgaggttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaagaacaaaagcgtattttacttatgtgcat 41049295  T
Q  140 cagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||  ||||||||||||||||||||||    
T  41049296 cagccttatgcaatgtgtcaacaacaattctct 41049328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 34622566 - 34622433
Alignment:
Q  40 gttaactaccgaggctttcctcgccagttaactgcagccgatttc-aaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgc 137  Q
    |||||||||||||| |||||||| ||||||||||||| || ||||  ||||||||  | |||||||  | | |||||||||||||| ||||||  |||||    
T  34622566 gttaactaccgaggatttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattacttgtgtgc 34622467  T
Q  138 ctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||  |||||||||||||||||||||    
T  34622466 ctcagccttatgcaatgtgtcaacaacaattctc 34622433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 34623386 - 34623519
Alignment:
Q  40 gttaactaccgaggctttcctcgccagttaactgcagccgatttc-aaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgc 137  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||  ||||||||| | ||||||| |||| | |||||||||||| ||||||| ||||     
T  34623386 gttaactaccgaggatttcctcggcagttaactgcagccgatctcttaattcctcggcagttaactgccgatgaggcaaaaacgtaaattactcgtgtgt 34623485  T
Q  138 ctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||| ||||||  ||| |||||||| ||||||||    
T  34623486 ctcaaccttatgcaatatgtcaacagcaattctc 34623519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 41047851 - 41047710
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||| | |||||||| ||||||||| || |||||| | |||||| ||  | |||||||||||||  ||||||| |||| ||| |     
T  41047851 ctcggcagttaactaccgaagttttcctcggcagttaactacacccgattattaaattcttctgcagttaactaccgagaagcaaaaatgtattttattt 41047752  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctctc 173  Q
    ||||||| ||| |||||  |||||||||||||||||||||||    
T  41047751 atgtgccgcagtcttatgcaatgtgtcaacaacaattctctc 41047710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 48314744 - 48314607
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactcatg 134  Q
    ||||||||| |||||||| |||| |||  ||||||||||||||| || |  ||||||||| | ||||||| |||||||||||||| |||| |||||  ||    
T  48314744 ggcagttaagtaccgaggttttcgtcggtagttaactgcagccggttattgaattcctcggcagttaactgccgaggggcaaaaatgtattttacttgtg 48314645  T
Q  135 tgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | ||||| ||||||  ||||||||||||||||||||||    
T  48314644 tacctcaaccttatgcaatgtgtcaacaacaattctct 48314607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 42682068 - 42681928
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagc-cgatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattact 130  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||  | |||  |||| ||| || |||||||||||||| | |||||| | || |||||    
T  42682068 ctcggcagttaattaccgaggttttcctcggcagttaactgcagctggtttttgaatttctcaaccgttaactaccgaggagacaaaaatgcattttact 42681969  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||||||||||||||||| ||| |||||| ||||||||||    
T  42681968 tatgtgcctcagccttataaaatatgtcaagaacaattctc 42681928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 9494805 - 9494942
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    |||| ||||||||| |||||| |||||||| ||||||||||||||| | |||  ||||||||| | ||||||| |||| |||||| | || ||| |||||    
T  9494805 ctcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttact 9494904  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
      ||||||||||||||||  ||||||||||||||||||    
T  9494905 tgtgtgcctcagccttatgaaatgtgtcaacaacaatt 9494942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 28980171 - 28980312
Alignment:
Q  33 ctcggcagttaactaccgaggctttcct-cgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattac 129  Q
    ||||||||||||||||||||| |||||| || |||||||||||| ||| || |  ||||| ||| | | ||||| | |||||| ||||||||||| ||||    
T  28980171 ctcggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaattcttcggcagctaactgctgagggggcaaaaacgtattttac 28980270  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    || |||| |||||||||||  |||||||||||||||||||||    
T  28980271 tcgtgtgtctcagccttatgcaatgtgtcaacaacaattctc 28980312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 30355238 - 30355379
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| |||  ||||| ||  |  |||||| |||| ||||||||| ||||| |||||    
T  30355238 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcgtattttact 30355337  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | |||  ||||| | |||  ||||||||||||||||||||||    
T  30355338 cgtgtttctcagtcatatgaaatgtgtcaacaacaattctct 30355379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 34742394 - 34742511
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattact 130  Q
    |||| ||||||||| |||||| |||||||| ||||||||||||| | |||||| |||||||||||  |||||| ||||||| | ||||||||| ||||||    
T  34742394 ctcgacagttaacttccgaggttttcctcggcagttaactgcagtcagatttctaattcctcgacaattaactgccgagggagaaaaaacgtaaattact 34742493  T
Q  131 catgtgcctcagccttat 148  Q
    | |||||| |||||||||    
T  34742494 cgtgtgccacagccttat 34742511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 47776413 - 47776266
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgta 123  Q
    |||||| |||||||||||| |||||||| |||||||| ||||||||||||||| |||||  |||| |||| | |||||||  ||| ||||||||| ||||    
T  47776413 agatttcctcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgta 47776314  T
Q  124 tattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||||| |||  |||||||||||  ||||||  |||| ||||||||    
T  47776313 ttttactcgtgtttctcagccttatcaaatgtgggaacatcaattctc 47776266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 36186494 - 36186608
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||| |||||||||||| ||| |||| ||||||||| |  |||||| |||||||| ||||| ||||| |||||| |||| | |||||||||  |||    
T  36186494 tttcctcggcagttaactgcaaccggtttcgaattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagccttatgcaat 36186593  T
Q  154 gtgtcaacaacaatt 168  Q
    |||||||||||||||    
T  36186594 gtgtcaacaacaatt 36186608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 36392195 - 36392059
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatg 134  Q
    ||||||||||   |||| |||||||| |||||||| ||| |||||||   |||||||| || |||||||  ||||||| ||||||||||| |||||  ||    
T  36392195 gcagttaacttttgaggttttcctcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtg 36392096  T
Q  135 tgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||| ||||||||  |||||||||||||||||||||    
T  36392095 tgcctaagccttatgtaatgtgtcaacaacaattctc 36392059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 37340376 - 37340236
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| ||| |||| |||||||||||| || | |||  ||||||||||| |||||||  || || | ||||||||||| ||| |    
T  37340376 ctcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttatt 37340277  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||||||| || |||||  |||||||||||| ||||||||    
T  37340276 tatgtgccttagtcttatgtaatgtgtcaacatcaattctc 37340236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 10098080 - 10098014
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| |||| |||  ||||||||||    
T  10098080 tagtttttagaatgatgaagatttcctcggcagataactaccgaggttttcttcggtagttaactgc 10098014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 42499483 - 42499421
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcg 94  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||    
T  42499483 ctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttcaaattcctcg 42499421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 48269688 - 48269615
Alignment:
Q  98 gttaactaccgaggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||| ||||| || |||||| ||| |||||  ||||||||||||||||| |||||||||||||||||||||    
T  48269688 gttaactgccgagagggaaaaacatattttacttgtgtgcctcagccttataaaatgtgtcaacaacaattctc 48269615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 34738445 - 34738377
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctc 93  Q
    |||||| ||||||||||||||||||||| |||||||| || |||||||||||| |||||| ||||||||    
T  34738445 agatttcctcggcagttaactaccgaggttttcctcggcatttaactgcagccagatttctaattcctc 34738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 46863344 - 46863484
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    ||||||||||||||| |||  |||| |   |||||||||||||||| |||   |||| |||| | ||||||| |||| ||||||||||||||| |||||     
T  46863344 tcggcagttaactacagagattttcgttcgcagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttactt 46863443  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     |||| |||||||||||  |||| |||||||||||||||||    
T  46863444 gtgtgtctcagccttatgcaatgcgtcaacaacaattctct 46863484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 15070429 - 15070378
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  15070429 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccgatttc 15070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 46860584 - 46860457
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    ||||||||||||| |||||| || ||||   |||||||||||| || |||   ||||||||||| ||||||| |||||||| ||||| ||||| |||||     
T  46860584 tcggcagttaactgccgaggtttgcctcaatagttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttactt 46860485  T
Q  132 atgtgcctcagccttatagaatgtgtca 159  Q
     ||||||||||||||||  |||||||||    
T  46860484 gtgtgcctcagccttatgtaatgtgtca 46860457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 9367723 - 9367769
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  9367723 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 9367769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 27453615 - 27453733
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| |||||||||||||||| ||||  ||||||||| | ||||||| |||||||| ||||  ||||| ||||| ||||  || ||||||||  ||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgtttctaagccttatcaaa 27453714  T
Q  153 tgtgtcaacaacaattctc 171  Q
    ||||| |||||||||||||    
T  27453715 tgtgtgaacaacaattctc 27453733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 10705326 - 10705185
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatat 126  Q
    |||||||||||||||||| || ||| ||| |||| ||||||||||||||||| |||  |||| |||| | ||||||| || | |||| ||||| |||| |    
T  10705326 ttttctcggcagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtattt 10705227  T
Q  127 tactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||  ||||||| ||||||||  ||| |||||| |||||||    
T  10705226 tacttgtgtgccttagccttatgaaatatgtcaataacaatt 10705185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 34139947 - 34139854
Alignment:
Q  57 tcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttat 148  Q
    |||||| |||||||||||||||| ||||| ||||| ||| | ||||| |||||| |||||||||||||| ||||||| |||||| || ||||||    
T  34139947 tcctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtgccacaaccttat 34139854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 45361697 - 45361584
Alignment:
Q  59 ctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattactcatgtgcctcagccttatagaatgtg 156  Q
    |||| |||||||||||||||| ||||  ||||||||| | ||||||| ||||||| |||||||| ||| ||||||||||  || ||||||||  ||||||    
T  45361697 ctcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgtttcttagccttatcaaatgtg 45361598  T
Q  157 tcaacaacaattct 170  Q
      ||||||||||||    
T  45361597 ggaacaacaattct 45361584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 35606870 - 35606822
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  35606870 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgc 35606822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 45767855 - 45767911
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  45767855 atttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 45767911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 618746 - 618805
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| |||||||||||||||| ||||||||||||||| | ||||||| ||||||||    
T  618746 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 17840889 - 17840932
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  17840889 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 17840932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 18105447 - 18105396
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  18105447 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 18105396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 15074220 - 15074278
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| |||| |||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  15074220 agatttcctcgacagttaactaccgaggttttcctcggcagttaactgccgccggtttc 15074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 41884118 - 41884176
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| |||||||||||||| |||||| |||||||| ||||||||||| |||| ||||    
T  41884118 agatttcctcggcagttaacttccgaggttttcctcggcagttaactgccgccggtttc 41884176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 17834568 - 17834515
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||| | |||||||| ||||||||||| ||||    
T  17834568 agatttcctcggcagttaactaccgaagttttcctcggcagttaactgccgccg 17834515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 40587735 - 40587674
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctc 93  Q
    |||||||||||||||| |||| |||||||| ||||||||||||| | |||||| ||||||||    
T  40587735 ctcggcagttaactactgaggttttcctcgacagttaactgcagtcggatttctaattcctc 40587674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 41623893 - 41623954
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||||||||| |||||  ||||||||| ||||||  |||||||||||| ||||||||    
T  41623893 ggggcaaaaacgtattttacttgtgtgcctcaaccttatgtaatgtgtcaacagcaattctc 41623954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 46596890 - 46596829
Alignment:
Q  111 gggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||||||| |||||| ||||| ||||||||||  |||||||| ||| |||||||||    
T  46596890 gggcaaaaacgtattttactcgtgtgcgtcagccttatgcaatgtgtccacagcaattctct 46596829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 19804512 - 19804628
Alignment:
Q  57 tcctcgccagttaactgcagccgatttcaa-attcctcgactgttaactaccgaggggcaaaaacgtatattactcatgtgcctcagccttatagaatgt 155  Q
    |||||| |||||||||||||||| |||| | |  | ||| | ||||||||||||||||||   | ||| ||||||| |||| |||||||  | | |||||    
T  19804512 tcctcggcagttaactgcagccggtttccacaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaacaaaatgt 19804611  T
Q  156 gtcaacaacaattctct 172  Q
    |||||||||||||||||    
T  19804612 gtcaacaacaattctct 19804628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 29592612 - 29592536
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||||||| | |||| ||| ||||||| ||||| || ||||||||||||||||| ||||||| || |||||    
T  29592612 cagttaactaccgaagttttcatcggcagttaattgcagtcggatttcaaattcctcgacagttaactgccaagggg 29592536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 30791002 - 30791058
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| ||||||||  |||||||||| |||| ||||    
T  30791002 atttcctcggcagttaactaccgaggttttcctcggtagttaactgccgccggtttc 30791058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 10098116 - 10098167
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||| |||||| |||||||| |||||||||||||||| ||||    
T  10098116 ctcgtcagttaactcccgaggttttcctcggcagttaactgcagccggtttc 10098167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 10225897 - 10225980
Alignment:
Q  87 attcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttat-agaatgtgtcaacaacaatt 168  Q
    |||| ||||| |||||||  ||||| ||||||||| ||| ||||| |||||| |||||||||| | ||||||||||||||||||    
T  10225897 attcatcgacagttaactgtcgaggaggcaaaaacatattttacttatgtgcttcagccttatgaaaatgtgtcaacaacaatt 10225980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 9365753 - 9365707
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  9365753 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 9365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 10098440 - 10098394
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  10098440 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 10098394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 21185627 - 21185553
Alignment:
Q  98 gttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||| |||||| ||||||| ||||| ||||| ||||| |||| | ||||  |||||||||||||||||||||    
T  21185627 gttaactgccgaggaggcaaaatcgtattttacttatgtgtctcatcattatgcaatgtgtcaacaacaattctc 21185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 28112856 - 28112774
Alignment:
Q  92 tcgactgttaactaccgag-gggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctctc 173  Q
    ||||| ||||||| ||||| |||||||| ||||| |||||  |||| |||| ||||||  |||||||||||||||||| ||||    
T  28112856 tcgacagttaactgccgagagggcaaaagcgtattttacttgtgtgtctcaaccttatgaaatgtgtcaacaacaattttctc 28112774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 48829958 - 48829896
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||||||| ||||||| |||||| || ||||||  ||||||  ||||||||||||||    
T  48829958 ggggcaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaattctct 48829896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 14102347 - 14102396
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    |||||||||||||| |||| | |||||||| ||||||| |||||||||||    
T  14102347 ctcggcagttaactgccgaagttttcctcggcagttaattgcagccgatt 14102396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 14412364 - 14412413
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    |||||||||||||| |||| | |||||||| ||||||| |||||||||||    
T  14412364 ctcggcagttaactgccgaagttttcctcggcagttaattgcagccgatt 14412413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 16674802 - 16674839
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  16674802 gcagttaactaccgaggatttcctcggcagttaactgc 16674839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 17649170 - 17649207
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  17649170 gcagttaactaccgaggatttcctcggcagttaactgc 17649207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 21190666 - 21190727
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||||||||| |||||| |||  || || |||||  |||||||||||||||||||||    
T  21190666 ggggcaaaaacgtattttactcgtgtttcttagacttatgcaatgtgtcaacaacaattctc 21190727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 36781446 - 36781491
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    |||||||||||||||| |||||| ||||||||  ||||||||||||    
T  36781446 ttctcggcagttaactgccgaggttttcctcgggagttaactgcag 36781491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 42795108 - 42795153
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||||||||||||||| |||| | |||||||| |||||||||||    
T  42795108 ttttctcggcagttaactgccgaagttttcctcggcagttaactgc 42795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 48590339 - 48590388
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||| |||||  ||||||||  |||||||||||||||||||    
T  48590339 tcggcagttaactgccgagattttcctcggtagttaactgcagccgattt 48590388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 11629764 - 11629812
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    |||||||||| |||||| |||||||| ||||||||||| |||| |||||    
T  11629764 gcagttaactgccgaggttttcctcgacagttaactgccgccggtttca 11629812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 20353924 - 20353972
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    |||| |||||||||||||||| |||| ||||||||  ||||||||||||    
T  20353924 atttcctcggcagttaactactgaggttttcctcgatagttaactgcag 20353972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 20564152 - 20564096
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||| ||| ||| ||||||| |||| ||||    
T  20564152 atttcctcggcagttaactaccgaggttttcttcggcagctaactgccgccggtttc 20564096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 29112443 - 29112395
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    |||||||||| |||| | |||||||| |||||||||||||||| |||||    
T  29112443 gcagttaactgccgaagttttcctcggcagttaactgcagccggtttca 29112395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 37345143 - 37345095
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    |||||||||| |||||  |||||||| ||||||||||| ||||||||||    
T  37345143 gcagttaactcccgagattttcctcggcagttaactgccgccgatttca 37345095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 43033048 - 43032969
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc--aaattcctcgactgttaactaccgag 110  Q
    |||||||||||||||||||||  |||||||  |||||||||| |||| ||||  |||  ||||| | |||||||||||||    
T  43033048 ctcggcagttaactaccgaggaattcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactaccgag 43032969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 34823015 - 34823156
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| || ||||||||||||| ||||  ||||||||||| ||||||| ||||| || ||||||||||||||||     
T  34823015 ctcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgagaggacaaaaacgtatattacg 34823114  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
      ||||||||| ||||||| ||||||||||||||||||||||    
T  34823115 tgtgtgcctcaaccttatacaatgtgtcaacaacaattctct 34823156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 2146957 - 2147095
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactca 132  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||| ||||||||||| || | ||||||| | ||||||  ||||||| | |||||||     
T  2146957 tcggcagttaactaccgaggttttcctcggcagtttactgcagccggtttcaaattccccggcagttaactgctgaggggaaaaaaacgaaaattactcg 2147056  T
Q  133 tgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  2147057 tgtgcctcaaccttatacaatgtgtcaacaacaattctc 2147095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 41855445 - 41855306
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatatt 127  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||  ||||| ||||| ||||||| |||||| ||||||||||||| ||    
T  41855445 tttctcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtatttt 41855346  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaat 167  Q
    ||||||||  ||||||| |||  |||||||||||||||||    
T  41855345 actcatgtttctcagccatatgaaatgtgtcaacaacaat 41855306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 18438707 - 18438567
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||| || |  |||||||| || ||||||| |||| ||||||||| ||||| |||||     
T  18438707 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttactt 18438608  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     ||||| ||||||||||  ||||||||||||||||||||||    
T  18438607 gtgtgcatcagccttatgcaatgtgtcaacaacaattctct 18438567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 39753031 - 39753137
Alignment:
Q  67 ttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaaca 165  Q
    ||||||||||||| |||||||||||||| | ||||||| |||| ||| |||||| ||| ||||||| ||||||| ||||||||| |||||||||||||||    
T  39753031 ttaactgcagccggtttcaaattcctcggcagttaactgccgatgggacaaaaatgtaaattactcgtgtgcctgagccttatacaatgtgtcaacaaca 39753130  T
Q  166 attctct 172  Q
    |||||||    
T  39753131 attctct 39753137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 35962381 - 35962264
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattact 130  Q
    |||||||||||||| |||||| |||||||| |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||    
T  35962381 ctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtattttact 35962282  T
Q  131 catgtgcctcagccttat 148  Q
     ||||| | |||||||||    
T  35962281 aatgtggcacagccttat 35962264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 41250064 - 41250212
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggggcaaaaacgtat 124  Q
    |||||| ||||||||||||| | ||||| |||||||| |||| |||||||| || ||||| ||  | ||||| |||||||||||||||||||||||||      
T  41250064 agatttcctcggcagttaaccatcgaggttttcctcggcagtaaactgcagtcggatttctaaaacttcgacagttaactaccgaggggcaaaaacgtca 41250163  T
Q  125 attactcatgtgcctcagccttatagaatgtgtcaacaacaattctctc 173  Q
    ||||||| |||||| || ||||||  ||||||  |||||||||||||||    
T  41250164 attactcgtgtgccacaaccttatgcaatgtgggaacaacaattctctc 41250212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 1114817 - 1114676
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||| | ||||||| |||| |||| |||| ||||| |||||    
T  1114817 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtattttact 1114718  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
      |||| | |||||||||   |||||  ||||||||||||||    
T  1114717 ggtgtggcacagccttatcacatgtgggaacaacaattctct 1114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 39751132 - 39751008
Alignment:
Q  48 ccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagcctt 146  Q
    |||||| |||||||| |||||||||||||||| |||||||||| ||| | ||||| | || ||||| ||||||||||| |||||| ||||||||| | ||    
T  39751132 ccgaggttttcctcggcagttaactgcagccggtttcaaattcatcggcagttaattgccaagggggcaaaaacgtattttactcgtgtgcctcaacatt 39751033  T
Q  147 atagaatgtgtcaacaacaattctc 171  Q
    ||  |||||||||||| ||||||||    
T  39751032 atgcaatgtgtcaacagcaattctc 39751008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 40077249 - 40077390
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| || ||||  ||| ||| ||| ||| ||    |||||| ||||||||||| |||||    
T  40077249 ctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgagggggcaaaaacgtattttact 40077348  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | |||  |||||||||||  ||||||||||||||||||||||    
T  40077349 cgtgtttctcagccttatcaaatgtgtcaacaacaattctct 40077390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 36677891 - 36677831
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  36677891 tagtttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcgccagtt 36677831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 22550864 - 22551003
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||  | ||| | ||||||| |||| |||||   | ||| |||||||    
T  22550864 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggtaaattactc 22550963  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | |||||||||  ||||||| |||||||||||||    
T  22550964 gtgtggcacagccttatcaaatgtgtaaacaacaattctc 22551003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 44052231 - 44052366
Alignment:
Q  39 agttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtg 136  Q
    ||||||||||||||| ||||||||  || ||||||||||| |||| ||||||||||| |  ||||||||||| |||||||||||||   |||||| ||||    
T  44052231 agttaactaccgaggttttcctcggtaggtaactgcagccggattgcaaattcctcggcaattaactaccgagggggcaaaaacgtcatttactcgtgtg 44052330  T
Q  137 cctcagccttatagaatgtgtcaacaacaattctct 172  Q
    || || ||||||  ||||||  ||||||||||||||    
T  44052331 ccacaaccttatgtaatgtgggaacaacaattctct 44052366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 18441440 - 18441581
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    |||||||||||||| |||||| ||| |||| ||||||||| ||  || || |  |||| |||| | ||||||| |||||||| ||||||||||| |||||    
T  18441440 ctcggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggcagttaactgccgagggggcaaaaacgtattttact 18441539  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
      |||| |||||||||||  ||||||||||||||||||||||    
T  18441540 tgtgtgtctcagccttatgaaatgtgtcaacaacaattctct 18441581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 41858122 - 41858260
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    |||| ||||||||| ||||||  ||||||| |||||||||||||||| |||   ||||| ||| | ||||||| |||||||| ||||||||||| |||||    
T  41858122 ctcgacagttaactcccgagg--ttcctcggcagttaactgcagccggtttttgaattcttcgccagttaactgccgagggggcaaaaacgtattttact 41858219  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||  ||||||| |||  |||||||||||||||||||||    
T  41858220 cgtgtttctcagccatatgaaatgtgtcaacaacaattctc 41858260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 184515 - 184455
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||    
T  184515 tagtttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 184455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 7168165 - 7168025
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatatt 127  Q
    |||||||| ||| ||||||||||| |||||||| |||||||||||||||| |||   ||||| ||| | | ||||   ||||||| ||||| ||||| ||    
T  7168165 tttctcggtagtcaactaccgaggttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtatttt 7168066  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||  ||||||||||||||||  ||||||||||||||||||    
T  7168065 acttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 7168025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 45454457 - 45454339
Alignment:
Q  56 ttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    ||||||| |||||||||||| ||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| |||||  |||||| ||| |||||  |||    
T  45454457 ttcctcggcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttactagtgtgccacagtcttatcaaat 45454358  T
Q  154 gtgtcaacaacaattctct 172  Q
    |||  ||||||||||||||    
T  45454357 gtgggaacaacaattctct 45454339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 18205862 - 18205742
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatatta 128  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||| | |||  ||||| ||| | ||||||  |||||| || |||||||||| |||    
T  18205862 ttctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgaggtggtaaaaacgtatttta 18205763  T
Q  129 ctcatgtgcctcagccttata 149  Q
    ||| |||  ||||||||||||    
T  18205762 ctcgtgtttctcagccttata 18205742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 22014420 - 22014364
Alignment:
Q  12 ttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||    
T  22014420 ttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 22014364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 43377331 - 43377391
Alignment:
Q  111 gggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||||||| ||||||| ||||||||||||||||  || ||||||||||||||||||    
T  43377331 gggcaaaaacgtaaattactcgtgtgcctcagccttatgcaacgtgtcaacaacaattctc 43377391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 26451554 - 26451420
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||| ||||| ||||||||  | |||||||||     ||||||||  || |||||||    
T  26451554 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttctaattcctcagcagttaactac-----ggcaaaaaaataaattactc 26451460  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||||| || ||||||  ||||||  || ||||||||||    
T  26451459 gtgtgccacaaccttatcaaatgtgggaagaacaattctc 26451420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 34366984 - 34366846
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactca 132  Q
    |||||||||||||||||||| ||||||||  |||||||||||||| |||||  ||  | ||| | |||||||  ||||||||||||| || | ||||||     
T  34366984 tcggcagttaactaccgaggttttcctcggaagttaactgcagccggatttataaaacttcggcagttaactgacgaggggcaaaaaggtcttttactcg 34366885  T
Q  133 tgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||| | |||||||||  ||||||  |||| ||||||||    
T  34366884 tgtggcacagccttatgtaatgtgggaacatcaattctc 34366846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 35389579 - 35389441
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcat 133  Q
    |||| ||||| ||| ||| |||||||| |||||||||||||| | |||   |||| |||| | |||||||  ||| | |||||||||||| ||||||| |    
T  35389579 ggcatttaacaaccaaggttttcctcggcagttaactgcagctggtttttgaatttctcggcagttaactgtcgaagaggcaaaaacgtaaattactcgt 35389480  T
Q  134 gtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     || |||||||||||  ||||||||||||||||||||||    
T  35389479 atgtctcagccttatgcaatgtgtcaacaacaattctct 35389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 41276885 - 41276999
Alignment:
Q  59 ctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtg 156  Q
    |||| ||||||||||||||||| |||| |||||||| || ||||||| |||||||| |||||| ||| ||||||| |||||  || ||||||  ||||||    
T  41276885 ctcggcagttaactgcagccgaatttctaattcctcaacagttaactgccgagggggcaaaaaagtaaattactcgtgtgcaacatccttatcaaatgtg 41276984  T
Q  157 tcaacaacaattctc 171  Q
      |||||||||||||    
T  41276985 ggaacaacaattctc 41276999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 42605234 - 42605360
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    |||||||||||||||||| | |||| ||| ||||||||||||||||| |||  ||||| ||||| ||||||| |||| |||| |||||| || ||||||     
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagggggtaaaaacataaattactt 42605333  T
Q  132 atgtgcctcagccttatagaatgtgtc 158  Q
     | ||| ||||||||||  ||||||||    
T  42605334 ttctgcatcagccttatgcaatgtgtc 42605360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 26663025 - 26663078
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  26663025 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 26663078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 32383205 - 32383254
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  32383205 tcggcagttaactaccgaggttttcctcggtagttaactgcagccgattt 32383254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 32437160 - 32437209
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  32437160 tcggcagttaactaccgaggttttcctcggtagttaactgcagccgattt 32437209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 39601785 - 39601732
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  39601785 agatttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccg 39601732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 8419483 - 8419427
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  8419483 atttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 8419427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 22577741 - 22577697
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgca 75  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  22577741 ttctcggcagttaactaccgaggttttcctcgacagttaactgca 22577697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 32375730 - 32375674
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  32375730 atttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 32375674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 35966753 - 35966829
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||||||||| |||| ||| || |||||||||| | |||||||||||||||| | ||||||| ||||||||    
T  35966753 cagttaactaccgaggatttcttcgacaattaactgcagtcggatttcaaattcctcggcagttaactgccgagggg 35966829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 184551 - 184602
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  184551 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 184602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 38872932 - 38873067
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcat 133  Q
    ||||||||| |||||||| |||||||| ||||||||||||||| | ||| ||||||||||   |||||||  ||||||| ||||||  | | |||||  |    
T  38872932 ggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaatattttttacttgt 38873031  T
Q  134 gtgcctcagccttatagaatgtgtcaacaacaattc 169  Q
    |||| ||||||||||  ||||||||  |||||||||    
T  38873032 gtgcatcagccttatgcaatgtgtcgtcaacaattc 38873067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 41016488 - 41016445
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  41016488 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 41016445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 43262500 - 43262433
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagc-cgatttcaaattcctcg 94  Q
    |||| ||||||||||||||||||| | |||||||| ||||||||||||||  |||||||||| |||||    
T  43262500 atttcctcggcagttaactaccgaagttttcctcggcagttaactgcagctggatttcaaatacctcg 43262433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 42602534 - 42602492
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgca 75  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  42602534 ctcggcagttaactaccgaggttttcctcggcagttaactgca 42602492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 39939207 - 39939260
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||| |||||||||||||| ||| |||||| | ||||||||||||||||    
T  39939207 agattttctaggcagttaactacctaggttttccttggcagttaactgcagccg 39939260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 43690055 - 43690172
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||| || ||||||||||||||||| |||||| ||    ||||||||||||| | |||||||||||| |||||  | | | ||||||||||  |||    
T  43690055 tttcctcgacatttaactgcagccgattttaaattcatcagtagttaactaccgagagagcaaaaacgtattttacttgtatacttcagccttatgaaat 43690154  T
Q  154 gtgtcaacaacaattctc 171  Q
    ||||||||  ||||||||    
T  43690155 gtgtcaacggcaattctc 43690172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 45133274 - 45133355
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgaggggca 115  Q
    ||||||||||| ||||| | ||||||||  |||||||||||||||||||||   ||||||||| ||||||| |||| |||||    
T  45133274 cggcagttaacaaccgaagttttcctcggtagttaactgcagccgatttcatttttcctcgacagttaactgccgaagggca 45133355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 7344551 - 7344607
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||| |||| ||||    
T  7344551 atttcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttc 7344607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 17924277 - 17924333
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| ||| |||| ||||||||||| |||| ||||    
T  17924277 atttcctcggcagttaactaccgaggtttttctcggcagttaactgccgccggtttc 17924333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 22014325 - 22014269
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  22014325 atttcctcggtagttaactaccgaggttttcctcggcagttaactgccgccggtttc 22014269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 36677931 - 36677979
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  36677931 ggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 36677979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 43679470 - 43679410
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcg 94  Q
    |||||||||||||||||||| ||||||   || ||||||||||||| |||| |||||||||    
T  43679470 tcggcagttaactaccgaggttttccttaacaattaactgcagccggtttcgaattcctcg 43679410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 1116213 - 1116264
Alignment:
Q  59 ctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga 109  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  1116213 ctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 1116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 5300755 - 5300680
Alignment:
Q  98 gttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||  ||||||| ||||||||||| |||||| |||  |||| ||||||  ||||||||||||||||||||||    
T  5300755 gttaactgtcgaggggacaaaaacgtattttactcgtgtttctcaaccttatcaaatgtgtcaacaacaattctct 5300680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 15030958 - 15030907
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||||||||||| |||||| |||||||| ||||||||||| |||| ||||    
T  15030958 ctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttc 15030907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 15033146 - 15033193
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccga 80  Q
    ||||||||||||||||||||| || ||||| ||||||| |||||||||    
T  15033146 ctcggcagttaactaccgaggtttccctcggcagttaattgcagccga 15033193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 20549253 - 20549312
Alignment:
Q  55 tttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||  |||||||||||||||| |||||||||||||| | ||||||| ||||||||    
T  20549253 tttcctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggg 20549312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 28646245 - 28646296
Alignment:
Q  32 tctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||| |||||||| |||| | |||||||| ||||||||||||||||||||    
T  28646245 tctcggtagttaactgccgaagttttcctcggcagttaactgcagccgattt 28646296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 28650829 - 28650880
Alignment:
Q  32 tctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||| |||||||| |||| | |||||||| ||||||||||||||||||||    
T  28650829 tctcggtagttaactgccgaagttttcctcggcagttaactgcagccgattt 28650880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 41743942 - 41743883
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||| ||| |||||||||||||||| ||||||||||||||| | |||||||| |||||||    
T  41743942 tttcttcggcagttaactgcagccggatttcaaattcctcggcagttaactatcgagggg 41743883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 45066360 - 45066411
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||||||||| |||||||| |||||||| ||||||||||| |||| ||||    
T  45066360 ctcggcagttaattaccgaggttttcctcggcagttaactgccgccggtttc 45066411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 39535 - 39493
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgac 96  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  39535 tttcctcggcagttaactgcagccggatttcaaattcctcgac 39493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 483890 - 483844
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  483890 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 483844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 21406341 - 21406295
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||    
T  21406341 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccg 21406295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 21800833 - 21800787
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||    
T  21800833 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccg 21800787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 22519561 - 22519607
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  22519561 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 22519607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 40740980 - 40740934
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||    
T  40740980 ctcggcagttaactgccgaagttttcctcggcagttaactgcagccg 40740934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 32584126 - 32584045
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||| |||| ||| |||| | |||||||| |||||||||||||||| ||||| ||  | ||||| ||||||||||||||||    
T  32584126 ctcggaagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgagggg 32584045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 34234601 - 34234516
Alignment:
Q  88 ttcctcgactgttaactaccgaggggc-aaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||| | ||||||||||||||||  ||||||||   |||||| |||| | |||||||||  ||||||| ||||||||||||||    
T  34234601 ttcctcggcagttaactaccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaatgtgtaaacaacaattctct 34234516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 40039199 - 40039150
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||| |||||    
T  40039199 tcggcagttaacttccgaggttttcctcggtagttaactgcagctgattt 40039150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 40039684 - 40039733
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||||||||||| ||||| ||||||||  |||||||||||| ||||||    
T  40039684 tcggcagttaactatcgaggttttcctcggtagttaactgcagtcgattt 40039733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 914791 - 914739
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    ||||| |||| |||||||| | |||||||| |||||||||||||||| |||||    
T  914791 ctcggtagtttactaccgaagttttcctcggcagttaactgcagccggtttca 914739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 43188126 - 43188006
Alignment:
Q  55 tttcctcgccagttaactgc-agccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttataga 151  Q
    |||||||| ||||||||| | ||||| ||||  |||||||||||  ||||||  ||||||| ||||| ||||| |||||| |||  |||||||||||  |    
T  43188126 tttcctcggcagttaactaccagccggatttttaattcctcgacaattaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttatcaa 43188027  T
Q  152 atgtgtcaacaacaattctct 172  Q
    |||||  ||||||||||||||    
T  43188026 atgtgagaacaacaattctct 43188006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 1180 - 1319
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    |||||||||||||| |||||| |||||||| ||||||| ||| |||| |||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  1180 ctcggcagttaacttccgaggttttcctcggcagttaattgctgccggtttcaaattcctcggcagttaactgccgaggggacaaaaacgtaaattactc 1279  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||||||||||||||||  ||||||||| || ||||||||    
T  1280 gtgtgcctcagccttatgcaatgtgtcagcagcaattctc 1319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 4204207 - 4204348
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatatta 128  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||| |||||| |||||||  |||| ||||||||||||| ||||    
T  4204207 tttctcggcagttaactaccgaggttttcctcgacagttaactgcag-cggtttcaaatttctcgacagttaactgtcgagagggcaaaaacgtaaatta 4204305  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||| ||| || |||| ||| |||||| | ||||||||    
T  4204306 ctcatgtgcttcaaccatatacaatatgtcaatagcaattctc 4204348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 3603148 - 3603287
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattactc 131  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||  || |  ||||| ||| | |||||||  |||||| |||||||||||| |||||     
T  3603148 tcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattttactt 3603247  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  3603248 atgtgcctcagccttatgcaatgtgtcaacaacaattctc 3603287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 18538332 - 18538471
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||||| | |||  |||||||||||  |||||| |||| ||||||||| ||||| |||    
T  18538332 ttctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtatttta 18538431  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||  ||||||||||||| ||  ||||||||||||||||||    
T  18538432 cttgtgtgcctcagcctaatgaaatgtgtcaacaacaatt 18538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 31094614 - 31094496
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||| ||| |||||||||||||||| |||||| |||| |||| |||||||||||||||| |||||| ||| ||||||| ||||||| ||||||||  |||    
T  31094614 tttcttcggcagttaactgcagccggtttcaatttccccgacagttaactaccgagggggcaaaaatgtaaattactcgtgtgcctaagccttatgcaat 31094515  T
Q  154 gtgtcaacaacaattctct 172  Q
    || ||||||||||||||||    
T  31094514 gtatcaacaacaattctct 31094496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 34123934 - 34124073
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||| |||||| ||||||| |||| ||||||||| ||||| |||||    
T  34123934 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttact 34124033  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattct 170  Q
      |||| | || ||||||  ||||||  ||||||||||||    
T  34124034 ggtgtggcacaaccttattaaatgtgggaacaacaattct 34124073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 34122598 - 34122493
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||| |||||||||| ||||| |||||    
T  34122598 ctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtattttact 34122499  T
Q  131 catgtg 136  Q
     |||||    
T  34122498 aatgtg 34122493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 25877695 - 25877556
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||| | |||||||| ||||||| |||||||| |||| ||||||||| |  |||| | ||| || || |||||||||| ||||||    
T  25877695 ctcggcagttaactaccgaagttttcctcggcagttaattgcagccggtttcgaattcctcggcatttaattgccgaagtggtaaaaacgtattttactc 25877596  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | || ||||||  |||||||||||||||||||||    
T  25877595 gtgtgacacaaccttatgcaatgtgtcaacaacaattctc 25877556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 28388519 - 28388658
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagc-cgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||| | | ||||| |||| |||||||||  ||| | |||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaagagtaaaatactc 28388618  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | |||||||||  || |||| |||||||||||||    
T  28388619 gtgtggcacagccttatgtaaagtgtaaacaacaattctc 28388658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 18307328 - 18307228
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||| |||  ||||||||||| ||||||| ||| ||| |||||||||||| |||||    
T  18307328 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgacagttaactgccgaaggagcaaaaacgtattttact 18307229  T
Q  131 c 131  Q
    |    
T  18307228 c 18307228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 20192427 - 20192287
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||| ||||||| ||| | |||||||| ||||||||||||||||||| |  ||||| ||  | |||||||  ||| ||||||||| ||||| |||||    
T  20192427 ctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagcagttaactgacgaaggggcaaaatcgtattttact 20192328  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
      ||||||||||||||||  |||||||||||||||||||||    
T  20192327 tgtgtgcctcagccttatgaaatgtgtcaacaacaattctc 20192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 20200148 - 20200288
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    ||||||||||||||| || | |||||||| |||||||||||||  | || |  |||| || ||| ||||||| |||| ||||||||||||||| ||| |     
T  20200148 tcggcagttaactacagatgttttcctcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttattt 20200247  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     ||||||||||||||||  ||||||||||||||||||||||    
T  20200248 gtgtgcctcagccttatgcaatgtgtcaacaacaattctct 20200288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 18310074 - 18310161
Alignment:
Q  86 aattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||||||| ||||||| | |||| ||||||||||||| |||||  ||||||||||||||||  ||||||||||||||||||||||    
T  18310074 aattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaacaacaattctct 18310161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 42539375 - 42539513
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactacc-gaggggcaaaaacgtatattactcat 133  Q
    |||||||||||||| | | |||||||| |||||||||||||||| ||||  |||| |||||| |||| |||||  |||||||||||||||| ||||||||    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatttctcgacagttagctacctaaggggcaaaaacgtattttactcat 42539474  T
Q  134 gtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||  |||| || |   |||||||||||| |||||||||    
T  42539475 gtgtatcagtctaaccaaatgtgtcaacatcaattctct 42539513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 34682330 - 34682194
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattactc 131  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||| | |||  ||||||||||| |||||||  | |||| |||||| ||||| |||||     
T  34682330 tcggtagttaactcccgaggttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttactt 34682231  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||  ||||||||||||  ||||||||||||||||||    
T  34682230 gtgaacctcagccttatgaaatgtgtcaacaacaatt 34682194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 7762243 - 7762382
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    |||||||||||||| | |||| |||||||| |||||||||||| |||| |||| ||  | ||| | ||||||| |||||||||||||||||  |||||||    
T  7762243 ctcggcagttaactcctgaggttttcctcgacagttaactgcaaccgaatttctaaaacttcggcagttaactgccgaggggcaaaaacgtcaattactc 7762342  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | |||||||||  ||||||  |||| ||||||||    
T  7762343 gtgtggcacagccttatgtaatgtgggaacagcaattctc 7762382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 27662306 - 27662243
Alignment:
Q  11 tttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| ||| || ||||||||    
T  27662306 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcaattaactgc 27662243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 41201797 - 41201662
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactcatgt 135  Q
    |||||||||||||||| |||||||| |||||||||||||||| || |  |||||||||||  |||| |  |||| || ||||| ||||| |||||| |||    
T  41201797 cagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtattttactcgtgt 41201698  T
Q  136 gcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||||  |||||||| ||  ||||||||    
T  41201697 gcctcagccttatgtaatgtgtcgacggcaattctc 41201662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 13568096 - 13568214
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| |||||||||||||||| ||||||||||||||| | |||||||||||| |||| ||||||||   |||||| | || | |||||||||  ||    
T  13568096 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgatggggtaaaaacgtcatttactcgtatggcacagccttatgtaa 13568195  T
Q  153 tgtgtcaacaacaattctc 171  Q
    ||||  |||||||||||||    
T  13568196 tgtgggaacaacaattctc 13568214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 39743154 - 39743288
Alignment:
Q  40 gttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgc 137  Q
    ||||||| |||||| |||||||| ||||||||||||| || ||||||||||||||| | |||||||  ||| ||||||||| | ||| |||||  ||||     
T  39743154 gttaactgccgaggttttcctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggggcaaaatcatattttactagtgtgg 39743253  T
Q  138 ctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | |||||||||  ||||||  ||||||||||||||    
T  39743254 cacagccttatcaaatgtgggaacaacaattctct 39743288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 542789 - 542866
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    ||||||||||||||||||||  |||||||| |||||| |||||||| |||||| ||||||||||| ||||||| ||||    
T  542789 ctcggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgacagttaactgccga 542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 7017586 - 7017505
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||| |||||| |  |||||||||||||| |||||||||||||||  | |||||||| |||||||    
T  7017586 ctcggcagttaactaccgaggttttccttgagagttaactgcagccggatttcaaattcctcagcagttaactatcgagggg 7017505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 38968169 - 38968028
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattact 130  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||| |||||   ||||||||   ||||||||||| |||  ||||||||||| |||||    
T  38968169 ctcggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctcggtagttaactaccgaaggatcaaaaacgtattttact 38968070  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     ||||   ||||||||||  ||||| |||||  |||||||||    
T  38968069 tatgtttttcagccttatgaaatgtatcaaccgcaattctct 38968028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 28387342 - 28387262
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||||||||||||| |||||||| || |||||||||||| || ||||||||||||| | |||||||  |||||||    
T  28387342 tcggcagttaactaccgaggatttcctcggcaattaactgcagccggaattcaaattcctcggcagttaactgtcgagggg 28387262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 7800990 - 7801125
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactcatg 134  Q
    ||||||||||||||| | ||||||||  | |||||||||||||| |||  |||||| |||| ||||||||||||| || |||||||||| |||| || ||    
T  7800990 gcagttaactaccgatgatttcctcggtaattaactgcagccgatttttgaattccacgacagttaactaccgagtggacaaaaacgtaaattattcgtg 7801089  T
Q  135 tgcctcagccttatagaatgtgtcaacaacaattct 170  Q
    || || | ||||||  |||||||||| | |||||||    
T  7801090 tgtcttatccttatgcaatgtgtcaaaagcaattct 7801125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 25897073 - 25897140
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcg 94  Q
    |||| ||||||||||||||||||||| |||||| | ||||||||||||||| || |||||||||||||    
T  25897073 atttcctcggcagttaactaccgaggatttcctgggcagttaactgcagccggagttcaaattcctcg 25897140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 1035263 - 1035177
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||| ||||||||||||||| ||||| ||||||||  | ||||||||||||| | ||||||||||||| | ||||||| ||||||||    
T  1035263 atttcctcggcagttaactatcgaggatttcctcggtaattaactgcagccgaaattcaaattcctcggcagttaactgccgagggg 1035177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 7796656 - 7796594
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||||||| ||||||| ||||||||||||| ||  |||||||||||| |||||||||    
T  7796656 ggggcaaaaacgtaaattactcgtgtgcctcagcctaatgcaatgtgtcaacatcaattctct 7796594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 19037469 - 19037515
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  19037469 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 19037515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 28238220 - 28238162
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  28238220 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 28238162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 7757406 - 7757353
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  7757406 agatttcctcggcagttaactagcgaggttttcctcggcagttaactgcagccg 7757353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 41798892 - 41798811
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| |||||||||||| |||| ||| ||||||||||||||| |||||||||||| ||  | ||||||| ||||||||    
T  41798892 ctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggg 41798811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 8577059 - 8577007
Alignment:
Q  22 atgaagattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  8577059 atgaagatttcctcggcagttaactaccgaggttttcttcggcagttaactgc 8577007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 25497587 - 25497535
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||| ||||    
T  25497587 ttctcggcagttaactaccgagattttcctcggcagttaactgcagccaattt 25497535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 1397371 - 1397486
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||| ||| ||||||||||||||| |||||| ||||||||  | ||||||| |||| |||||||||| ||| ||||||| |||||| || ||||||  ||    
T  1397371 tttcatcggcagttaactgcagccggatttctaattcctcagcagttaactgccgagggggcaaaaatgtaaattactcgtgtgccacaaccttatcaaa 1397470  T
Q  153 tgtgtcaacaacaatt 168  Q
    ||||  ||||||||||    
T  1397471 tgtgggaacaacaatt 1397486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 33995147 - 33995282
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgaggggcaaaaac-gtatattact 130  Q
    |||||||||||||| |||||| |||||||| ||||||| |||| |||||||   |||| |||| | |||||||  |||||||  ||||  |||| |||||    
T  33995147 ctcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaattgtattttact 33995246  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaa 166  Q
      ||||||||| ||||||| ||| ||||||||||||    
T  33995247 tgtgtgcctcaaccttataaaatatgtcaacaacaa 33995282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 13837798 - 13837752
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  13837798 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 13837752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 19041109 - 19041167
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||| ||| ||| ||||||| |||||||||    
T  19041109 agatttcctcggcagttaactaccgaggttttcttcggcagctaactgccgccgatttc 19041167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 25890068 - 25890006
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcg 94  Q
    |||||||||| |||||||||| ||||||||  |||||||||||| | ||||||||||||||||    
T  25890068 ctcggcagtttactaccgaggttttcctcggtagttaactgcagtcggatttcaaattcctcg 25890006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 4196633 - 4196517
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    |||||||| ||||||| |||||||||||| |||||||||| |  |||||||||| | | |||||||| ||| | |||| |||| | ||| |||||  |||    
T  4196633 tttcctcggcagttaattgcagccgattttaaattcctcggcacttaactaccgaatgagcaaaaacttatttgactcgtgtgacacag-cttatgcaat 4196535  T
Q  154 gtgtcaacaacaattctc 171  Q
    ||||||||| ||||||||    
T  4196534 gtgtcaacatcaattctc 4196517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 17965923 - 17965842
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||| ||||||||||| | |||||||| ||||||||||||| || ||||  |||||||||||  |||||| ||||||||    
T  17965923 ctcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgagggg 17965842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 17966889 - 17967026
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatg 134  Q
    ||||||||||||||||  ||||||||  |||||||||||| | |||||  |||| |||| | ||||||| |||| |||| |||| ||||| |||||  ||    
T  17966889 gcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtattttactagtg 17966988  T
Q  135 tgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |  |||||||||||  ||||||  ||||||||||||||    
T  17966989 tttctcagccttatcaaatgtgggaacaacaattctct 17967026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 11346081 - 11346037
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagc 77  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||    
T  11346081 ctcgacagttaactaccgaggttttcctcggcagttaactgcagc 11346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 14280894 - 14280950
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| |||||| |||||||||||||| |||||||| ||||||||||| |||| ||||    
T  14280894 atttcctcggccgttaactaccgaggttttcctcggcagttaactgccgccggtttc 14280950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 38855713 - 38855761
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  38855713 ggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 38855761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 41799770 - 41799906
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatg 134  Q
    |||||||||| |||| | |||| ||| ||||||||||||||  |||||| ||||||||  | |||||||  ||||||| |||||| ||| ||||||| ||    
T  41799770 gcagttaacttccgaagttttcatcggcagttaactgcagctagatttctaattcctcagcagttaactgtcgagggggcaaaaaagtaaattactcgtg 41799869  T
Q  135 tgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    || | ||| |||||  ||||||  |||||||||||||    
T  41799870 tgtcacagtcttatcaaatgtgggaacaacaattctc 41799906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 7021879 - 7021938
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| ||||||||||||||| |||||||||||||||  | |||| |||||||||||    
T  7021879 tttcctcggcagttaactgcagccggatttcaaattcctcagcagttatctaccgagggg 7021938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 8702197 - 8702296
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattact 130  Q
    |||| |||||||||||||||| |||||||  ||||||||||||| | |||||  ||||||||| | |||||||  |||||| |||||| ||||| |||||    
T  8702197 ctcgtcagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactgtcgagggagcaaaatcgtattttact 8702296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 11028998 - 11029049
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  11028998 atttcctcggcagttaactcccgaggatttcctcggcagttaactgccgccg 11029049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 25499887 - 25500025
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactc 131  Q
    |||||| ||||||||  ||| |||||||| |||||||| ||| ||| |||   ||||||||||  ||||||| |||||||| ||||| ||||| |||||     
T  25499887 tcggcacttaactactaaggttttcctcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgtattttactt 25499986  T
Q  132 atgt--gcctcagccttatagaatgtgtcaacaacaatt 168  Q
     |||  |||||||||||||  |||||||||||| |||||    
T  25499987 gtgttcgcctcagccttatgtaatgtgtcaacaccaatt 25500025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 33993356 - 33993225
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    ||||||||||||||||||||||| ||| | || ||||||||| ||||| | |||  ||||  ||| | ||||||| |||| ||||||||||||||| |||    
T  33993356 ttctcggcagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtatttta 33993257  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaa 160  Q
    ||| | |  |||| ||||||  ||||||||||    
T  33993256 ctcgtatttctcaaccttatgaaatgtgtcaa 33993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 13838424 - 13838474
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||| ||||    
T  13838424 tcggcagttaactgccgaggttttcctcggtagttaactgcagccggtttc 13838474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 19035312 - 19035266
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  19035312 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 19035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 27660014 - 27659976
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaac 71  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  27660014 ctcggcagttaactaccgaggttttcctcggcagttaac 27659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 27867841 - 27867959
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| |||| ||||||||||| | ||||||||||||| | ||||||| |||| |||| |||| ||||| |||||  |||| | |||||||||   |    
T  27867841 tttcctcggcagtaaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcaca 27867940  T
Q  153 tgtgtcaacaacaattctc 171  Q
    ||||  |||||||||||||    
T  27867941 tgtgggaacaacaattctc 27867959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 28876724 - 28876666
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| |||||||||||||| |||||| ||||||||  |||||||||| |||| ||||    
T  28876724 agatttcctcggcagttaactgccgaggttttcctcgggagttaactgccgccggtttc 28876666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 29430100 - 29430050
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||| |||||||| |||||| |||||||| || |||||||||||||    
T  29430100 ttttctcggtagttaactgccgaggttttcctcggcacttaactgcagccg 29430050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 30192566 - 30192520
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||    
T  30192566 ctcggcagttaactgccgaagttttcctcgacagttaactgcagccg 30192520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 30611234 - 30611172
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||||| || |||||| |||  |||||||||||  ||||||| ||||||||||||||    
T  30611234 ggggcaaaaacgaattttactcgtgtttctcagccttatcaaatgtgtgaacaacaattctct 30611172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 30612956 - 30612894
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||||||||||| |||||| |||  ||| |||||||  ||||||| ||||||||||||||    
T  30612956 ggggcaaaaacgtattttactcgtgtttctcggccttatcaaatgtgtgaacaacaattctct 30612894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 30708977 - 30708931
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||||| || ||||| ||||||||||||||||    
T  30708977 ctcggcagttaactcccgaggtttccctcggcagttaactgcagccg 30708931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 42537209 - 42537135
Alignment:
Q  98 gttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||| |||| |||||||||| |||| |||||| |||  |||||||||||  ||||||| |||||||||||||    
T  42537209 gttaactgccgatggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgtgaacaacaattctc 42537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 541000 - 540959
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||||||  |||||||| |||||||||||    
T  541000 ctcggcagttaactaccgagaatttcctcgacagttaactgc 540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 30354400 - 30354437
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgca 75  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  30354400 cagttaactaccgaggttttcctcgacagttaactgca 30354437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 30705168 - 30705205
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaact 72  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  30705168 cggcagttaactaccgaggatttcctcggcagttaact 30705205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 37814655 - 37814610
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||| ||| |||||||| ||||||||||| ||||    
T  37814655 tcggcagttaactaccaaggttttcctcggcagttaactgccgccg 37814610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 5847 - 5807
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    |||||||||||||||||| |||||||| || ||||||||||    
T  5847 ggcagttaactaccgaggttttcctcggcaattaactgcag 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 1398673 - 1398541
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattactcatgt 135  Q
    |||||||||||||||| |||||| | | |||||||||| ||| || |  ||||||||| | |||||||  || ||| ||||||  |||| |||||  |||    
T  1398673 cagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtattttacttctgt 1398574  T
Q  136 gcctcagccttatagaatgtgtcaacaacaatt 168  Q
    | |||| ||||||  ||||||||||||||||||    
T  1398573 gtctcaaccttatgtaatgtgtcaacaacaatt 1398541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 36503106 - 36503154
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    ||||||||||||||||| ||| |||| ||||||||||| |||| |||||    
T  36503106 gcagttaactaccgaggtttttctcggcagttaactgccgccggtttca 36503154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 37820875 - 37820915
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcg 94  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  37820875 tttcctcggcagttaactgcagccggatttcaaattcctcg 37820915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 44051091 - 44051232
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaatt-cctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| ||||  ||| ||||| | ||||||  |||| |||||||||||||| ||||||    
T  44051091 ctcggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaattact 44051190  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
      ||||||||||||||||  ||||||||||||||||||||||    
T  44051191 ggtgtgcctcagccttatgcaatgtgtcaacaacaattctct 44051232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 37959720 - 37959856
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggggc-aaaaacgtatattactc 131  Q
    |||||||||||||||||| | |||||||| |||||||||||||| | || | ||||||||| || ||||||| ||||||||  |||||||||| ||||||    
T  37959720 tcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactc 37959819  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||||||||||||||  ||||||||||||||||||    
T  37959820 gtgtgcctcagccttatgtaatgtgtcaacaacaatt 37959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 49572904 - 49573040
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgt 135  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||| |  ||||||||||| |||||||  ||| ||||||||||||||| |||||  |||    
T  49572904 cagtttactaccgaggttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgt 49573003  T
Q  136 gcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||||||  |||||||||||||| |||||||    
T  49573004 gcctcagccttatgcaatgtgtcaacaacgattctct 49573040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 11494616 - 11494477
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactca 132  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| |||  ||||||||||| ||||| | |||||||| ||||||||||| ||||||     
T  11494616 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttttgaattcctcgacagttaattgccgaggggacaaaaacgtattttactcg 11494517  T
Q  133 tgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||  |||| |||| |  |||||||| |||||||||||||    
T  11494516 tgtttctcacccttttcaaatgtgtcgacaacaattctct 11494477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 9890068 - 9889928
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||| |||| |||| |||| ||||| |||||    
T  9890068 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttact 9889969  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
      |||| | |||||||||   |||||  |||||||||||||    
T  9889968 ggtgtggcacagccttatcacatgtgggaacaacaattctc 9889928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 38464770 - 38464904
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtg 136  Q
    |||||||||||||||| |||||| | |||||||||||||||| |||| ||||||||| |  ||||||  |||||  |||||| | ||| ||||||||||     
T  38464770 cagttaactaccgaggttttccttgacagttaactgcagccggtttcgaattcctcgtcatttaactgtcgaggaagcaaaatcatattttactcatgta 38464869  T
Q  137 cctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||| ||||||  |||||||||||||||||||||    
T  38464870 cctcaaccttatgaaatgtgtcaacaacaattctc 38464904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 958593 - 958729
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||| |||   ||||| ||| | |||||||  |||| || ||||||||||| |||||    
T  958593 ctcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcatcg-cagttaactgtcgagaggacaaaaacgtattttact 958691  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     |||||||||||||||||| |||||||||||| |||||    
T  958692 tatgtgcctcagccttataaaatgtgtcaacatcaatt 958729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 4979916 - 4980056
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgaggg-gcaaaaacgtatattact 130  Q
    |||||||||||||||||||   |||||||  |||||||||||||||| |||   || || ||||| ||||||| ||||||| | ||||||||| ||||||    
T  4979916 ctcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaattact 4980015  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | ||||||||| ||||||  |||||||||||||||||||||    
T  4980016 cgtgtgcctcaaccttatgcaatgtgtcaacaacaattctc 4980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 21472505 - 21472620
Alignment:
Q  55 tttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| ||||||||||||||||||||   ||||||||| | ||||||| |||||| ||||||||||||| |||||| |||  |||||||||||  ||    
T  21472505 tttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaaa 21472604  T
Q  153 tgtgtcaacaacaatt 168  Q
    ||||||||||||||||    
T  21472605 tgtgtcaacaacaatt 21472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 50274812 - 50274694
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| |||||||||||||||| ||||| ||||||||| | ||||||| |||||||| |||||||||| ||||||| |||||| ||||| |||  ||    
T  50274812 tttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaacgtaaattactcgtgtgccacagccctatcaaa 50274713  T
Q  153 tgtgtcaacaacaattctc 171  Q
    ||||  |||||||||||||    
T  50274712 tgtgggaacaacaattctc 50274694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 15995796 - 15995715
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| |  |||||| ||||||||    
T  15995796 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggg 15995715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 19069261 - 19069180
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| |  |||||| ||||||||    
T  19069261 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggg 19069180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 1042009 - 1041869
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||| | |||||| ||||||||| | ||||||| ||||  ||||||||| ||| ||||||    
T  1042009 ctcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggcagttaactgccgatcgggcaaaaaagtaaattact 1041910  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | ||| || |||||||||  ||||||  |||||||||||||    
T  1041909 cgtgtaccacagccttatcaaatgtgggaacaacaattctc 1041869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 172
Target Start/End: Complemental strand, 8109472 - 8109324
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggggcaaaaa-cgta 123  Q
    |||||| ||| |||||||||| |||||| |||||||| |||||||||| ||||| || |  ||||||||||| |||||||||| |||||  |||| ||||    
T  8109472 agatttcctcagcagttaactcccgaggttttcctcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgta 8109373  T
Q  124 tattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | |||||| |||  |||||||||||  ||||||  ||||||||||||||    
T  8109372 ttttactcgtgtttctcagccttatcaaatgtgggaacaacaattctct 8109324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 29700302 - 29700438
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactc 131  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||| || |  ||||||||  | |||||||  ||||| | ||||| ||||| |||||     
T  29700302 tcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgaggagacaaaagcgtattttactt 29700401  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||||||||||||||  ||||||||||||||||||    
T  29700402 gtgtgcctcagccttatgaaatgtgtcaacaacaatt 29700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 6280926 - 6280791
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatttc-aaattcctcgactgttaactaccgag-gggcaaaaacgtatattactcatgt 135  Q
    |||||||||||||| | |||||||   | ||||||||||||| |||  |||||| | ||| ||||||| ||||| ||||||||||||| ||||||| |||    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaacgtaaattactcgtgt 6280827  T
Q  136 gcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||| || ||||||  |||||||||||||||||||||    
T  6280826 gccccaaccttatgcaatgtgtcaacaacaattctc 6280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 50278819 - 50278938
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||| |||||||  ||||||| |||||||||| ||||||| |||||| || ||||||  ||    
T  50278819 tttcctcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgtaaattactcgtgtgccacaaccttatcaaa 50278918  T
Q  153 tgtgtcaacaacaattctct 172  Q
    ||||  ||||||||||||||    
T  50278919 tgtgggaacaacaattctct 50278938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 15999793 - 15999879
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||| |||| | ||||||| ||||||||    
T  15999793 atttcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccgagggg 15999879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 44561329 - 44561466
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattc-ctcgactgttaactaccgag-gggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||  ||||||||  ||||||||||||||| |||   |||  |||| | |||||| |||||| |||||||| ||||| |||||    
T  44561329 ctcggcagttaactaccgagattttcctcggtagttaactgcagccggttttttatttactcggcagttaacaaccgagagggcaaaatcgtattttact 44561428  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    | |||  |||||||||||  ||||||||||||||||||    
T  44561429 cgtgtttctcagccttatgaaatgtgtcaacaacaatt 44561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 955865 - 955729
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatattactc 131  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||   ||||||||  | ||||||| || | | ||||||||||||| |||||     
T  955865 tcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttactt 955766  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||||||| | ||||  |||||||||||| |||||    
T  955765 gtgtgcctcaactttatgaaatgtgtcaacatcaatt 955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 37563243 - 37563183
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||    
T  37563243 tagtttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 37563183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 39773507 - 39773567
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||    
T  39773507 tagtttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 39773567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 51426610 - 51426474
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattactc 131  Q
    ||||||||||||||| |||| ||| |||| || |||||||||||||| |||  ||||||||||| |||||||  || | || ||||||||||| |||||     
T  51426610 tcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttactt 51426511  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||||| ||||||||  || |||||||||||||||    
T  51426510 gtgtgcctaagccttatgaaacgtgtcaacaacaatt 51426474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 54633978 - 54633918
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||    
T  54633978 tagtttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 54633918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 172
Target Start/End: Complemental strand, 51492152 - 51492005
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtat 124  Q
    |||||| ||||||||||||||||||||| |||||| | ||||||||||||||| |||||| ||  | ||||| ||||| | |||||  ||||||||||      
T  51492152 agatttcctcggcagttaactaccgaggttttcctaggcagttaactgcagccggatttctaaaacttcgacagttaattgccgagaagcaaaaacgtca 51492053  T
Q  125 attactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     |||||| |||| | || ||||||  ||||||  ||||||||||||||    
T  51492052 tttactcgtgtggcacaaccttatgtaatgtgggaacaacaattctct 51492005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 19073655 - 19073713
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcc 91  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  19073655 tcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcc 19073713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 21022880 - 21022970
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgaggggca 115  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||| ||  | ||| | ||||||| ||||||||||    
T  21022880 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggca 21022970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 37022053 - 37022118
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattc 90  Q
    ||||||||||||||||||||| |||||| ||||||||  ||||||||||||||| |||||||||||    
T  37022053 agattttctcggcagttaactgccgaggttttcctcggtagttaactgcagccgaatttcaaattc 37022118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 16983595 - 16983455
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    |||||||||||||||||||| ||| |||| |||||||||| |||| |||||| ||  | ||| | ||||||| |||| |||| ||||||||   ||||||    
T  16983595 tcggcagttaactaccgaggtttttctcggcagttaactgtagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactc 16983496  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     |||| | |||||||||  ||||||| ||||||||||||||    
T  16983495 gtgtggcacagccttatcaaatgtgtaaacaacaattctct 16983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 16984160 - 16984300
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||| |||||| ||  | ||| | ||||||| |||| |||| ||||||||   |||||    
T  16984160 ctcggcagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttact 16984259  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||| | |||||||||  ||||||| |||| ||||||||    
T  16984260 cgtgtggcacagccttatcaaatgtgtaaacagcaattctc 16984300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 21470980 - 21470840
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatatt 127  Q
    |||||||||||||||||||||||| |||||||  | ||||||||||| | | |||  ||| ||||||| ||||||| |||||  | ||||||||||| ||    
T  21470980 tttctcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtatttt 21470881  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||  ||||||||| ||||||  ||||||| || |||||||    
T  21470880 acttgtgtgcctcaaccttatccaatgtgtaaagaacaatt 21470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 33383878 - 33383750
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcag-ccgatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactc 131  Q
    ||||||||||||| |||||| |||||||| ||||||||||||| | | ||| ||| ||||||||  ||||||||||||  |||||||| |||| |||||     
T  33383878 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcggtttttaaaatcctcgacaattaactaccgagaaggcaaaaatgtattttactt 33383779  T
Q  132 atgtgcctcagccttatagaatgtgtcaa 160  Q
     ||||||| | ||||||  ||||||||||    
T  33383778 gtgtgcctaaaccttatgaaatgtgtcaa 33383750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 41023460 - 41023388
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaact 104  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||| ||||||||||| |||| | |||||||    
T  41023460 ctcggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaact 41023388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 39590568 - 39590707
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactc 131  Q
    |||||||||||||||||||| |||||||| |||||||||||||| | ||||| ||  | ||| | ||||||| |||| ||||||||||| |   ||||||    
T  39590568 tcggcagttaactaccgaggttttcctcggcagttaactgcagctgtatttctaaaacttcggcagttaactgccgagggggcaaaaacatcatttactc 39590667  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | |||||||||| ||||||  |||| ||||||||    
T  39590668 gtgtggcacagccttatataatgtggaaacagcaattctc 39590707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 56304926 - 56304811
Alignment:
Q  57 tcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactcatgtgcctcagccttatagaatgt 155  Q
    |||||| || |||||||||||| |||||  ||||||||||| ||||||| |||| ||||||||| |||| |||||| |||  |||| ||||||  |||||    
T  56304926 tcctcggcaattaactgcagccagatttttaattcctcgacagttaactgccgatgggcaaaaatgtattttactcgtgtttctcaaccttatcaaatgt 56304827  T
Q  156 gtcaacaacaattctc 171  Q
    |  |||||||||||||    
T  56304826 gggaacaacaattctc 56304811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 6178109 - 6178155
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  6178109 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 6178155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 21018129 - 21018067
Alignment:
Q  12 ttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||| ||| |||||||||||    
T  21018129 ttttagaatgatgcagaattcctcggcagttaactaccgaggttttcttcggcagttaactgc 21018067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 30726733 - 30726791
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  30726733 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgctgccggtttc 30726791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 40358272 - 40358330
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  40358272 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 40358330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 49094158 - 49094112
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  49094158 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 49094112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 31425310 - 31425363
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  31425310 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 31425363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 34151687 - 34151638
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  34151687 tcggcagtttactaccgaggttttcctcggcagttaactgcagccgattt 34151638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 49563919 - 49563863
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||| |||| ||||    
T  49563919 attttctcggccgttaactaccgaggttttcctcggcagttaactgccgccggtttc 49563863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 4768726 - 4768615
Alignment:
Q  59 ctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtg 156  Q
    |||| ||||||||||||||| |||||  ||||||||| | ||||||| |||||||| |||||   ||| |||||  ||||| ||||||||||  ||||||    
T  4768726 ctcggcagttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtg 4768627  T
Q  157 tcaacaacaatt 168  Q
    ||||||||||||    
T  4768626 tcaacaacaatt 4768615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 28234499 - 28234444
Alignment:
Q  24 gaagattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||| ||||||||||||||||||||||||| |||||||| || |||||||| ||||    
T  28234499 gaagtttttctcggcagttaactaccgaggttttcctcggcatttaactgccgccg 28234444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 37563279 - 37563330
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  37563279 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 37563330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 38460500 - 38460441
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcct 92  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||   ||||||||||||    
T  38460500 ctcggcagttaattaccgaggttttcctcgacagttaactgcagctagtttcaaattcct 38460441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 39773478 - 39773427
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  39773478 ctcggcagttaactaccgaggttttcctcggcagttaactgctgccggtttc 39773427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 54634014 - 54634065
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  54634014 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 54634065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 1089576 - 1089634
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||||||| || |||||||| |||| ||||    
T  1089576 agatttcctcggcagttaactaccgaggttttcctcggcatttaactgccgccggtttc 1089634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 17342220 - 17342166
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||||||||| | ||| ||||  |||||||||||||||||||    
T  17342220 ttttctcggcagttaactaccgaagtttttctcggtagttaactgcagccgattt 17342166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 20208580 - 20208538
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  20208580 gcagttaactaccgaggttttcctcggcagttaactgcagccg 20208538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 41795355 - 41795401
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  41795355 ctcggcagttaactaacgaggttttcctcggcagttaactgcagccg 41795401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 49169089 - 49169147
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| |||||||||||||||||||||  ||||||| ||||||||||| |||| ||||    
T  49169089 agatttcctcggcagttaactaccgaggtattcctcggcagttaactgccgccggtttc 49169147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 55407792 - 55407838
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||    
T  55407792 ctcggcagttaactaccgagattttcctcggcagttaactgcagccg 55407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 55793994 - 55793948
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  55793994 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccg 55793948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 56138326 - 56138280
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||||    
T  56138326 ctcggcagttaactactgaggttttcctcggcagttaactgcagccg 56138280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 33409596 - 33409547
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||| |||||| ||||||||  |||||||||||||||||||    
T  33409596 tcggcagttaactgccgaggttttcctcgggagttaactgcagccgattt 33409547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 33410229 - 33410278
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||| |||||| ||||||||  |||||||||||||||||||    
T  33410229 tcggcagttaactgccgaggttttcctcgggagttaactgcagccgattt 33410278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 51644553 - 51644610
Alignment:
Q  111 gggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||||||  |||| ||||| |||||||||||||| ||| ||||||||||||||||||    
T  51644553 gggcaaaatggtattttacttatgtgcctcagcctaataaaatgtgtcaacaacaatt 51644610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 52529281 - 52529236
Alignment:
Q  39 agttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||||    
T  52529281 agttaactaccgaggttttcctcggcagttaactgccgccgatttc 52529236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 67666 - 67626
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactg 73  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  67666 ctcggcagttaactaccgaggttttcctcgacagttaactg 67626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 4975812 - 4975752
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattct 170  Q
    |||| ||||||||| ||||||| |||||||||||||| |  |||||||||| |||||||||    
T  4975812 ggggtaaaaacgtaaattactcgtgtgcctcagcctttttcaatgtgtcaataacaattct 4975752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 26932663 - 26932619
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaact 72  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||    
T  26932663 atttcctcggcagttaactaccgaggttttcctcggcagttaact 26932619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 38368306 - 38368250
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    ||||||||| |||| |||||||| | |||||||| |||||||||||||||| |||||    
T  38368306 ttttctcggtagtttactaccgaagttttcctcggcagttaactgcagccggtttca 38368250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 1044540 - 1044595
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    |||||||| ||||||||||||||| |||||||||||| ||||| ||||||| ||||    
T  1044540 tttcctcggcagttaactgcagccagatttcaaattcatcgacagttaactgccga 1044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 3403899 - 3403844
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||    
T  3403899 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 3403844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 41933622 - 41933673
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||||| |||||    
T  41933622 tcggcagttaactaccgaggtttttctcggtagttaactgcagccggtttca 41933673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 44680116 - 44680077
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  44680116 cggcagttaactaccgaggatttcctcggcagttaactgc 44680077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 48256566 - 48256613
Alignment:
Q  32 tctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||| || | |||||||| ||||||||||||||||    
T  48256566 tctcggcagttaactactgaagttttcctcggcagttaactgcagccg 48256613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 34154432 - 34154538
Alignment:
Q  64 cagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaac 161  Q
    |||||||||||||||| |||   ||||||||| | ||||||| |||| ||| |||||| |||| |||| | |||  |||||||||||  |||||||||||    
T  34154432 cagttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtattttacccgtgtttctcagccttatgaaatgtgtcaac 34154531  T
Q  162 aacaatt 168  Q
    |||||||    
T  34154532 aacaatt 34154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 37394297 - 37394223
Alignment:
Q  58 cctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccg-aggggcaaaaacgtatattact 130  Q
    ||||| |||||||||||| ||| ||||||||||||||||| ||||||| ||| || ||||||| ||||| |||||    
T  37394297 cctcggcagttaactgcatccggatttcaaattcctcgacagttaactgccgaagaggcaaaatcgtattttact 37394223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 41793438 - 41793392
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  41793438 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 41793392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 41800929 - 41800987
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||| ||| ||| ||||||| |||| ||||    
T  41800929 agatttcctcggcagttaactaccgaggttttcttcggcagctaactgccgccggtttc 41800987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 21015813 - 21015732
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||| || ||||  |||||||||||| ||| ||||| ||  | ||||| ||||||| ||||||||    
T  21015813 ctcggcagttaactaccgaggtttccctcagcagttaactgcacccgtatttctaaaacttcgacagttaactgccgagggg 21015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 21018004 - 21018049
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||| |||||| |||||||| ||||||| ||||||||    
T  21018004 tcggcagttaactgccgaggttttcctcggcagttaattgcagccg 21018049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 30723260 - 30723223
Alignment:
Q  21 gatgaagattttctcggcagttaactaccgaggctttc 58  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  30723260 gatgaagatttcctcggcagttaactaccgaggttttc 30723223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 40354679 - 40354638
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  40354679 ctcggcagttaactaccgaggttttcttcggcagttaactgc 40354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 44558694 - 44558637
Alignment:
Q  111 gggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||||||||  |||| |||||  ||||||||||||||||  ||||||||||||||||||    
T  44558694 gggcaaaagtgtattttacttgtgtgcctcagccttatgtaatgtgtcaacaacaatt 44558637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 20209323 - 20209371
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc 78  Q
    |||||||||||||||||||||| | ||| |||  |||||||||||||||    
T  20209323 tttctcggcagttaactaccgaagttttactcagcagttaactgcagcc 20209371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 23221669 - 23221721
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    ||||| |||| |||||||| | |||||||| |||||||||||||||| |||||    
T  23221669 ctcggtagtttactaccgaagttttcctcggcagttaactgcagccggtttca 23221721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 37015979 - 37015931
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||| || |||||||||||||||| | |||||||| |||||||||||    
T  37015979 agatttcctgggcagttaactaccgaagttttcctcggcagttaactgc 37015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 37395212 - 37395260
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaa 102  Q
    |||||||| || ||||||||||||| ||||||||||||||||| |||||    
T  37395212 tttcctcggcaattaactgcagccggatttcaaattcctcgacagttaa 37395260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 37563144 - 37563088
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||| ||| |||| ||||    
T  37563144 atttcctcggtagttaactaccgaggttttcctcggcagttaattgccgccggtttc 37563088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 39588142 - 39588026
Alignment:
Q  57 tcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaatg 154  Q
    |||||| ||||||||||||| || ||||| ||||||||| | ||||||| |||| |||||||||||||   |||||| |||| | || ||||||  |||     
T  39588142 tcctcggcagttaactgcagtcgaatttctaattcctcggcagttaactgccgagggggcaaaaacgtcatttactcgtgtgacacatccttatgcaata 39588043  T
Q  155 tgtcaacaacaattctc 171  Q
    ||  |||||||||||||    
T  39588042 tgagaacaacaattctc 39588026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 45971759 - 45971807
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    |||||||||||||||||| | |||| |||  ||||||||||||||||||    
T  45971759 tcggcagttaactaccgaagttttcttcgatagttaactgcagccgatt 45971807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 51683255 - 51683199
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaa 166  Q
    ||||||||||||||| |||||| |||  ||||||||||| |||||| | ||||||||    
T  51683255 ggggcaaaaacgtattttactcgtgtttctcagccttatcgaatgtatgaacaacaa 51683199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 115)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 7247864 - 7247999
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgt 135  Q
    |||||||||||||||| |||||||| |||||||||||||||| || |  ||||||||| | ||||||| |||||||| ||||| ||||| ||| || |||    
T  7247864 cagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattttattcgtgt 7247963  T
Q  136 gcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||||  |||||||||||||||||||||    
T  7247964 gcctcagccttatccaatgtgtcaacaacaattctc 7247999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 2432943 - 2433082
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggggcaaaaa-cgtatattactc 131  Q
    |||||||||||||||| ||| |||||||| |||||||||| | ||| || |  ||||||||||| ||||||| ||||||||  |||| ||||| ||||||    
T  2432943 tcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattttactc 2433042  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     ||||||||||||||||  |||||||||||||||||||||    
T  2433043 gtgtgcctcagccttatgcaatgtgtcaacaacaattctc 2433082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 41579724 - 41579863
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt-tcaaattcctcgactgttaactaccgaggggcaaaaa-cgtatattactc 131  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| || |  ||||||||  |  |||||| |||||||| ||||| ||||| |||||     
T  41579724 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttactt 41579823  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||||||||  || ||||||||||||||||||    
T  41579824 atgtgcctcagccttatgcaacgtgtcaacaacaattctc 41579863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 29918337 - 29918477
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatatt 127  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||| | |||| ||||  ||| | ||||| | |||||||| ||||| ||||| ||    
T  29918337 tttctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtatttt 29918436  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||| |||||||||||||||||  ||| ||||||||||||||    
T  29918437 acttatgtgcctcagccttatgaaatatgtcaacaacaatt 29918477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 29929503 - 29929363
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatatt 127  Q
    |||||||||||||||||| ||||| |||||||| ||||||| ||||||| | |||  |||||||| || |||||||  |||||| |||||| | ||| ||    
T  29929503 tttctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatatttt 29929404  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||  ||||||||||||||||| ||||||||||||||||||    
T  29929403 acttgtgtgcctcagccttataaaatgtgtcaacaacaatt 29929363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 29967490 - 29967630
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatatt 127  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||| | |||| ||||  ||| | ||||| | |||||||| ||||| ||||| ||    
T  29967490 tttctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtatttt 29967589  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||| |||||||||||||||||  ||| ||||||||||||||    
T  29967590 acttatgtgcctcagccttatgaaatatgtcaacaacaatt 29967630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 29978657 - 29978517
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatatt 127  Q
    |||||||||||||||||| ||||| |||||||| ||||||| ||||||| | |||  |||||||| || |||||||  |||||| |||||| | ||| ||    
T  29978657 tttctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatatttt 29978558  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||  ||||||||||||||||| ||||||||||||||||||    
T  29978557 acttgtgtgcctcagccttataaaatgtgtcaacaacaatt 29978517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 6489403 - 6489267
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc-aaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| ||||  ||||||||| |    |||| |||| |||||||||||||| ||||||    
T  6489403 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggtttcttaattcctcggc----aactgccgagggggcaaaaacgtaaattact 6489308  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
      ||||||||| ||||||  |||||||||||| ||||||||    
T  6489307 tgtgtgcctcaaccttatgcaatgtgtcaacagcaattctc 6489267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 42756234 - 42756092
Alignment:
Q  32 tctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattac 129  Q
    |||||||||||||||  ||||| |||||||| |||||||||||| ||| ||||  ||||||||||| ||||||| | |||||| ||||||||||| ||||    
T  42756234 tctcggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttac 42756135  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||  || | ||||||  ||||||||||||||||| ||||    
T  42756134 tcatgtttctgaaccttatcaaatgtgtcaacaacaatcctct 42756092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 41805682 - 41805815
Alignment:
Q  41 ttaactaccgaggctttcctcgccagttaactgcagccgat-ttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattactcatgtgcc 138  Q
    |||||| |||||| |||||||| ||||||| |||||||| | || |||||| ||||| ||||||| ||||||  ||||||||||| ||||||  ||||||    
T  41805682 ttaactcccgaggttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcc 41805781  T
Q  139 tcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||||||  ||||||||| ||||||||||||    
T  41805782 tcagccttatgcaatgtgtcatcaacaattctct 41805815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 46345003 - 46344871
Alignment:
Q  41 ttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcc 138  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||  ||||||||||| ||||||| |||| ||||||||||  ||| |||||  ||||||    
T  46345003 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcc 46344904  T
Q  139 tcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||| ||||||  ||| |||||||| ||||||||    
T  46344903 tcaaccttatccaatttgtcaacatcaattctc 46344871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 52570565 - 52570701
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    ||||||||||||||||||||| ||| ||||  |||||||||||| || |||   ||||| ||| | ||||||| |||||||| |||||||||| ||| ||    
T  52570565 ctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccgaggggaaaaaacgtattttaatc 52570664  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||||||||||||||  ||||||||||| ||||||    
T  52570665 gtgtgcctcagccttatgcaatgtgtcaacgacaatt 52570701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 4002504 - 4002643
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactc 131  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||    ||||||| |||||||||||||  ||| | |||||    
T  4002504 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccgaggggcaaaagagtaaaatactc 4002603  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
     |||| | |||||||||  || |||| |||| ||||||||    
T  4002604 gtgtggcacagccttatgtaaagtgtaaacagcaattctc 4002643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 2743472 - 2743391
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  2743472 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 2743391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 6505973 - 6506090
Alignment:
Q  56 ttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaat 153  Q
    ||||||| |||||||||||||||| ||||  ||||||| | | ||||||| | |||||| |||||||||| ||||||| ||||||||||||||||| |||    
T  6505973 ttcctcggcagttaactgcagccggtttcttaattccttggcagttaacttctgaggggacaaaaacgtaaattactcgtgtgcctcagccttatacaat 6506072  T
Q  154 gtgtcaacaacaattctc 171  Q
    |||||||||  |||||||    
T  6506073 gtgtcaacagtaattctc 6506090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 41803072 - 41802939
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattact 130  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| |||||| ||| | ||||||| ||||| |||||||||||||| |||||    
T  41803072 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccgagtgggcaaaaacgtattttact 41802973  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaac 164  Q
    | | |  ||||||| |||  |||||||| |||||    
T  41802972 cgtatttctcagccatatgaaatgtgtcgacaac 41802939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 48250863 - 48251008
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtata 125  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||| || ||||||||||||  | ||||||| |||| |||||||||||||       
T  48250863 attttctcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaaacgtcat 48250962  T
Q  126 ttactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||| | ||||| | || ||||||  ||||||  |||||||||||||    
T  48250963 ttatttatgtggcacaaccttatgtaatgtgggaacaacaattctc 48251008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 600536 - 600683
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgta 123  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| |||||| ||  | ||| | |||||||  |||||| ||||||||||     
T  600536 agatttcctcggcagttaactaccgaggttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgagggcgcaaaaacgtc 600635  T
Q  124 tattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
      |||||| |||||| ||||||| || ||||||  |||||||||||||    
T  600636 atttactcgtgtgccgcagccttctacaatgtgggaacaacaattctc 600683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 11380513 - 11380374
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactca 132  Q
    ||||||| ||||||||||| | |||||| |||||||||||| ||  ||||  ||||||||| | ||||||| |||| ||||||||||||||| ||||||     
T  11380513 cggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaaacgtattttactcg 11380414  T
Q  133 tgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||  |||||||| |   ||||||||||||||||||||||    
T  11380413 tgtttctcagcctaaccaaatgtgtcaacaacaattctct 11380374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 46989617 - 46989480
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgag-gggcaaaaacgtatattactcatg 134  Q
    ||||||||||||||||| |||||||| ||||||||||||||| || |||||||| ||||   ||||||| ||||| ||||||||||||   |||||| |     
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaaacgtcatttactcgta 46989518  T
Q  135 tgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    || | || ||||||  ||||||| ||||||||||||||    
T  46989517 tgacacaaccttattaaatgtgtaaacaacaattctct 46989480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 55385211 - 55385074
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||| |||||| ||  | ||| | ||||||| |||| |||||||||||||  ||||||    
T  55385211 ctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcaattact 55385112  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    | |||||| || ||||||  ||||||  ||||||||||    
T  55385111 cgtgtgccacaaccttatgcaatgtgggaacaacaatt 55385074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 1835234 - 1835294
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||    
T  1835234 tagtttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 1835294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 19440329 - 19440193
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt-caaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactc 131  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| |||   ||||| ||| | ||||||| |||||| |||||||   ||| ||||||    
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgaggaggcaaaagtttattttactc 19440230  T
Q  132 atgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     ||||||||||| ||||  ||||| |||||| |||||    
T  19440229 gtgtgcctcagctttatgcaatgtatcaacagcaatt 19440193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 41844327 - 41844267
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||    
T  41844327 tagtttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 41844267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 19341593 - 19341700
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    |||||||||||||| |||| | ||||||||  |||||||||||||| |||||| ||||||||| | ||||||| |||||||| ||||||||||  |||||    
T  19341593 ctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaaacgtaacttact 19341692  T
Q  131 catgtgcc 138  Q
    | ||||||    
T  19341693 cgtgtgcc 19341700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 49219796 - 49219907
Alignment:
Q  39 agttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatattactcatgtg 136  Q
    ||||||||||| ||| |||||||| ||||||||||||||| |||||| ||||||||| | |||||||||||||| |||||||  |||| |||||  ||||    
T  49219796 agttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagttaactaccgaggaggcaaaattgtattttactagtgtg 49219895  T
Q  137 cctcagccttat 148  Q
     | |||||||||    
T  49219896 gcacagccttat 49219907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 52567840 - 52567697
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagg-ggcaaaaacgtatatt 127  Q
    |||||||||||||||||||| | | ||| |||| ||||||| ||||||||||||   ||||  ||| | ||||||| |||||  ||||||| ||||| ||    
T  52567840 tttctcggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtatttt 52567741  T
Q  128 actcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||| ||||||||||||||||  || || |||||||||||||||    
T  52567740 actcgtgtgcctcagccttatgcaacgtatcaacaacaattctc 52567697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 55205345 - 55205270
Alignment:
Q  98 gttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||| |||||||| |||||||||| ||||||||| ||||||||||||||  |||||||||||| |||||||||    
T  55205345 gttaactgccgaggggacaaaaacgtaaattactcatatgcctcagccttatgcaatgtgtcaacatcaattctct 55205270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 30256001 - 30256139
Alignment:
Q  32 tctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattac 129  Q
    |||| ||||||||||| ||||| |||||||| |||||||||||||||| |||   ||||||||| | |||||||||| ||||| ||   | |||| ||||    
T  30256001 tctcagcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactaccaagggggcatttatgtattttac 30256100  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |  ||||||||||| ||||  ||||||||||||||||||    
T  30256101 ttgtgtgcctcagctttatgaaatgtgtcaacaacaatt 30256139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 66942 - 66841
Alignment:
Q  65 agttaactgcagccgatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaa 163  Q
    ||||||||||||||| |||  ||| ||||| | ||||||| |||||||| ||||| ||||| |||||| |||| |||||||||||  |||||||||||||    
T  66942 agttaactgcagccggttttgaatacctcggcagttaactgccgagggggcaaaagcgtattttactcgtgtgtctcagccttatcaaatgtgtcaacaa 66843  T
Q  164 ca 165  Q
    ||    
T  66842 ca 66841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 9429848 - 9429929
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||| ||||||||  | ||||||||||||  ||||||||||||||| | ||||||| ||||||||    
T  9429848 ctcggcagttaactaccgaggttttcctcggtacttaactgcagccaaatttcaaattcctcggcagttaactgccgagggg 9429929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 24700795 - 24700718
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga 109  Q
    ||||||||||||||||||||| ||||||||  ||||||||||| || |||||| ||||||||||| ||||||| ||||    
T  24700795 ctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 34694433 - 34694514
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||||||||| |||||| ||| |||| ||||| ||||||||| |||||| ||||||||||| ||||||| ||||||||    
T  34694433 ctcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgacagttaactgccgagggg 34694514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 35743576 - 35743632
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  35743576 atttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccgatttc 35743632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 34691699 - 34691620
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg 111  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||  | ||||||| | ||||||| ||||||    
T  34691699 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgagg 34691620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 36817515 - 36817582
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcg 94  Q
    |||| ||||||||||||||||||||| ||||||||  |||||||||||||| || |||||||||||||    
T  36817515 atttcctcggcagttaactaccgaggatttcctcgatagttaactgcagccggagttcaaattcctcg 36817582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 51696571 - 51696654
Alignment:
Q  89 tcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||| | |||||||||||||||| |||||| ||| ||||||| |||||| |||||||||  |||||| ||||||||||||||    
T  51696571 tcctcggcagttaactaccgagggggcaaaaaagtaaattactcgtgtgccacagccttatcaaatgtggcaacaacaattctc 51696654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 2647698 - 2647744
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  2647698 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 2647744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 14398614 - 14398468
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtata 125  Q
    |||| |||| ||||||||| |||||| || ||||| ||||||||||||||| || ||||||||||||| | ||||||  |||||| |  |||| |||| |    
T  14398614 atttcctcgacagttaacttccgaggattccctcggcagttaactgcagccggaattcaaattcctcggcagttaaccgccgaggagataaaatcgtaaa 14398515  T
Q  126 ttactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
     ||||| |||| | |||||||||  || |||| ||||||||||||||    
T  14398514 atactcgtgtgacacagccttatgtaaagtgtaaacaacaattctct 14398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 34049154 - 34049108
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  34049154 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 34049108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 43476266 - 43476220
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  43476266 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 43476220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 48246486 - 48246440
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  48246486 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccg 48246440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 54389869 - 54389823
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  54389869 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 54389823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 55267481 - 55267375
Alignment:
Q  67 ttaactgcagccgatttca-aattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaac 164  Q
    |||||||||||||||||   ||||| ||| | |||||||  ||||||| |||||||||| ||||||| |||| |||||||||||  || |||||||||||    
T  55267481 ttaactgcagccgatttttgaattcttcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgtctcagccttatgcaacgtgtcaacaac 55267382  T
Q  165 aattctc 171  Q
    |||||||    
T  55267381 aattctc 55267375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 14043894 - 14043947
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||||||| |||| | |||||||| ||||||||||||||||||||    
T  14043894 tttctcggcagttaactgccgaagttttcctcggcagttaactgcagccgattt 14043947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 45101847 - 45101984
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    ||||||||||||||||| | |    ||||| ||||||||||||||| | |||  |||||||| ||  |||||| ||||||||  |||||||||| |||||    
T  45101847 ctcggcagttaactaccaaagaaaacctcggcagttaactgcagccggtttttgaattcctcaacaattaactgccgaggggataaaaacgtattttact 45101946  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
     |||||||||| ||||||  |||||||| |||||||||    
T  45101947 tatgtgcctcaaccttatgaaatgtgtcgacaacaatt 45101984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 46697792 - 46697739
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  46697792 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 46697739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 49196448 - 49196565
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattact 130  Q
    |||| |||||||||| || || ||||||||  ||||||||||| ||| ||||  ||||||||||| |||| ||| ||||||| ||||||||||| |||||    
T  49196448 ctcgacagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttact 49196547  T
Q  131 catgtgcctcagccttat 148  Q
    | |||  |||||||||||    
T  49196548 cgtgtttctcagccttat 49196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 49609457 - 49609384
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaacta 105  Q
    ||||||||||||||||||||| ||| |||| || |||||||| |||| |||||||||||||||||  |||||||    
T  49609457 ctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaatttcaaattcctcgacaattaacta 49609384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 13896876 - 13896920
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc 78  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  13896876 tcggcagttaactaccgaggttttcctcgacagttaactgcagcc 13896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 19454348 - 19454464
Alignment:
Q  57 tcctcgccagttaactgcagccgatttca-aattcctcgactgttaactaccgag-gggcaaaaacgtatattactcatgtgcctcagccttatagaatg 154  Q
    |||||| |||||||||||| |||||||   ||||||||  | ||||||| ||||| |||||||| ||||| |||||| |||| |||| ||||||  ||||    
T  19454348 tcctcggcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatg 19454447  T
Q  155 tgtcaacaacaattctc 171  Q
    | |||||||||||||||    
T  19454448 tatcaacaacaattctc 19454464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 20918010 - 20918148
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga--ggggcaaaaacgtatattac 129  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||| |||||  ||||| ||| | ||||| |  |||  |||||||||| |||| ||||    
T  20918010 ctcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaattgtcgaggggggcaaaaatgtattttac 20918109  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaacaacaattc 169  Q
     | | |  |||||||||||  |||||||||||||||||||    
T  20918110 -cgtatttctcagccttatcaaatgtgtcaacaacaattc 20918148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 20926972 - 20927110
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga--ggggcaaaaacgtatattac 129  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||| |||||  ||||| ||| | ||||| |  |||  |||||||||| |||| ||||    
T  20926972 ctcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaattgtcgaggggggcaaaaatgtattttac 20927071  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaacaacaattc 169  Q
     | | |  |||||||||||  |||||||||||||||||||    
T  20927072 -cgtatttctcagccttatcaaatgtgtcaacaacaattc 20927110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 50477260 - 50477208
Alignment:
Q  27 gattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  50477260 gatttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 50477208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 13743345 - 13743286
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| |||||||||||||||| ||||||||||||||| | ||||||| ||||||||    
T  13743345 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 13743286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 13747718 - 13747796
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg 111  Q
    |||||||||||||||| |||| |||||||  ||||||||||||||| |||||||||||| ||| | ||||||| ||||||    
T  13747718 ctcggcagttaactac-gaggttttcctcagcagttaactgcagccggatttcaaattcatcggcagttaactgccgagg 13747796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 28611097 - 28611236
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatatta 128  Q
    ||||||||||||||||||||  | |||||||| ||||||||||||||| | |||  |||| |||| | ||||||| |||| |||||||||   ||| |||    
T  28611097 ttctcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatatttta 28611196  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    ||  |||| |||||||||||  ||||||| || |||||||    
T  28611197 cttgtgtgtctcagccttatgaaatgtgtaaagaacaatt 28611236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 41137770 - 41137651
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| ||||||||||||||| |||||||||||||||| | ||||||| | || || |||||||| ||| |||||  |||| | || ||||||  ||    
T  41137770 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgctgatggagcaaaaacatattttactagtgtggcacaaccttatcaaa 41137671  T
Q  153 tgtgtcaacaacaattctct 172  Q
    ||||  ||||||||||||||    
T  41137670 tgtgggaacaacaattctct 41137651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 41844363 - 41844414
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  41844363 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 41844414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 44227186 - 44227139
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccga 80  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  44227186 ctcggcagttaactaccgaggttttcctcggcagttaactccagccga 44227139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 4004802 - 4004848
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  4004802 ctcggcagttaagtaccgaggttttcctcggcagttaactgcagccg 4004848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 7839500 - 7839611
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    |||||||||||||||||||||   ||||||  |||||||||||||| | |||  ||||||||||| ||| ||| |||| |||||||||||||| ||||||    
T  7839500 ctcggcagttaactaccgagg--atcctcggtagttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaaacgtaaattact 7839597  T
Q  131 catgtgcctcagcc 144  Q
    | |||  |||||||    
T  7839598 cgtgtatctcagcc 7839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 14402991 - 14403109
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    |||||||| ||||||||| | |||| ||||||||||||||| | ||||||| |||| |||||||||  ||| | ||||| |||| | |||||||||  ||    
T  14402991 tttcctcggcagttaactaccgccggatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtggcacagccttatgtaa 14403090  T
Q  153 tgtgtcaacaacaattctc 171  Q
     |||| |||||||||||||    
T  14403091 agtgtaaacaacaattctc 14403109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 23443131 - 23443245
Alignment:
Q  59 ctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtg 156  Q
    |||| |||||||||||||||| | ||||||||||||| | ||||||| |||| |||| |||| ||||| |||||  |||| | |||||||||  ||||||    
T  23443131 ctcggcagttaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtgtcacagccttatcaaatgtg 23443230  T
Q  157 tcaacaacaattctc 171  Q
      |||||||||||||    
T  23443231 ggaacaacaattctc 23443245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 30943268 - 30943222
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||    
T  30943268 atttcctcggcagttaactaccgaggttttcctcggcagttaactgc 30943222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 43478829 - 43478875
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||    
T  43478829 ctcggcagttaactaccgaagttttcctcggcagttaactgcagccg 43478875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 43568933 - 43568863
Alignment:
Q  98 gttaactaccgaggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaatt 168  Q
    |||||||||  | |||||||| ||||| |||||| |||  |||||||||||| ||||||||||||||||||    
T  43568933 gttaactactcaagggcaaaagcgtattttactcgtgtttctcagccttataaaatgtgtcaacaacaatt 43568863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 49140846 - 49140892
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||||    
T  49140846 ctcggcagttaactactgaggttttcctcggcagttaactgcagccg 49140892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 49144448 - 49144506
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||| ||| ||||||||||| |||| ||||    
T  49144448 agatttcctcggcagttaactaccgaggttttcttcggcagttaactgccgccggtttc 49144506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 50216879 - 50216993
Alignment:
Q  59 ctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtg 156  Q
    |||| |||||||||||||||| ||||  ||||||||| | ||||||| || | |||||||||||||  ||||||| |||||| || ||||||  ||||||    
T  50216879 ctcggcagttaactgcagccggatttttaattcctcggcagttaactgccaatggggcaaaaacgtcaattactcgtgtgccacaaccttatcaaatgtg 50216978  T
Q  157 tcaacaacaattctc 171  Q
      |||||||||||||    
T  50216979 ggaacaacaattctc 50216993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 42165244 - 42165191
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  42165244 agatttcctcggcagttaactaccgaggttttcctcggcaattaactgccgccg 42165191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 55207662 - 55207803
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattact 130  Q
    ||||||||||||||||| ||| | |||| | |||||||||||| || | |||  ||||| ||| | ||||||| |||| |||||||||  |||| |||||    
T  55207662 ctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggcagttaactgccgatggggcaaaagagtattttact 55207761  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    | |||  ||||||| |||  |||||||||||| |||||||||    
T  55207762 cgtgtttctcagccatatgaaatgtgtcaacatcaattctct 55207803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 2062463 - 2062415
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc 78  Q
    ||||||||||||||||| |||| | |||||||| |||||||||||||||    
T  2062463 tttctcggcagttaactgccgaagttttcctcgacagttaactgcagcc 2062415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 2745229 - 2745285
Alignment:
Q  58 cctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||| ||||||||||||||||| |||||||||||||  | ||||||||||||||||    
T  2745229 cctcgacagttaactgcagccgaatttcaaattcctcagcagttaactaccgagggg 2745285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 3501897 - 3501945
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  3501897 ggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 3501945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 3953209 - 3953265
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||| |||| ||||    
T  3953209 atttcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttc 3953265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 6745320 - 6745376
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||| | ||||||||||| |||| ||||    
T  6745320 atttcctcggcagttaactaccgaggttttccttggcagttaactgccgccggtttc 6745376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 8156587 - 8156531
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||| |||| ||||    
T  8156587 atttcctcggcagttaactgccgaggttttcctcggcagttaactgccgccggtttc 8156531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 8475910 - 8475854
Alignment:
Q  23 tgaagattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||| ||| ||| ||||||||||||||||| |||||||| ||||||||||| ||||    
T  8475910 tgaagttttcctcagcagttaactaccgaggttttcctcggcagttaactgccgccg 8475854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 32060276 - 32060352
Alignment:
Q  97 tgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    ||||||||| |||| || |||||||||| ||||||| | ||||||||||||||  ||||||| || |||||||||||    
T  32060276 tgttaactatcgagtggacaaaaacgtaaattactcgtatgcctcagccttatgcaatgtgttaaaaacaattctct 32060352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 36134267 - 36134311
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaa 70  Q
    |||||||||||||||||||||||||||| |||||| | |||||||    
T  36134267 agattttctcggcagttaactaccgaggttttccttggcagttaa 36134311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 36812911 - 36812848
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg--atttcaaattcctcg 94  Q
    |||||||||| |||||||||| ||||||||  |||||||||||||||   ||||||||||||||    
T  36812911 ctcggcagtttactaccgaggttttcctcggtagttaactgcagccggattttcaaattcctcg 36812848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 42760210 - 42760254
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  42760210 cggcagttaactaccgaggttttcctcggcagttaactacagccg 42760254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 36134397 - 36134354
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  36134397 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 36134354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 41612399 - 41612438
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  41612399 cggcagttaactaccgaggatttcctcggcagttaactgc 41612438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 44490413 - 44490341
Alignment:
Q  98 gttaactaccgagg-ggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    |||||||||||||| ||||||||||||| ||| || |||| |||||||||||  | | |||||||||||||||||    
T  44490413 gttaactaccgaggaggcaaaaacgtattttattcgtgtgtctcagccttat--attatgtcaacaacaattctc 44490341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 48888811 - 48888768
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccg 48888768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 50953354 - 50953295
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||||||| ||||||||||||||| ||||||||||||||   | ||||||||||||||||    
T  50953354 tttcctcggcagttaactgcagccggatttcaaattcctatgcagttaactaccgagggg 50953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 51402397 - 51402436
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaact 72  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  51402397 ctcggcagttaactaccgaggttttcctcgacagttaact 51402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 2271312 - 2271358
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||||| || ||||| ||||||||||||||||    
T  2271312 ctcggcagttaactcccgaggattccctcggcagttaactgcagccg 2271358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 2950440 - 2950394
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  2950440 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 2950394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 2967917 - 2967975
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| ||||||||||||||||||||| |||| ||| ||| ||||||| |||| ||||    
T  2967917 agatttcctcggcagttaactaccgaggttttcttcggcagctaactgccgccggtttc 2967975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 4004927 - 4004885
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagtt 68  Q
    |||||| ||||||||||||||||||||| |||||||| |||||    
T  4004927 agatttcctcggcagttaactaccgaggttttcctcgacagtt 4004885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 6143745 - 6143699
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||    
T  6143745 ctcggcagttaactgccgaagttttcctcggcagttaactgcagccg 6143699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 7837587 - 7837525
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||| |||||| || ||||||  |||| |||||||||||  ||||||||||||||||||||||    
T  7837587 ggggaaaaaacttaaattacttgtgtgtctcagccttatgcaatgtgtcaacaacaattctct 7837525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 16484455 - 16484501
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||    
T  16484455 ctcggcagttaactcccgaagttttcctcggcagttaactgcagccg 16484501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 35743503 - 35743537
Alignment:
Q  8 tagtttttagaatgatgaagattttctcggcagtt 42  Q
    |||||||||||||||||||||||| ||||||||||    
T  35743503 tagtttttagaatgatgaagatttcctcggcagtt 35743537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 43571715 - 43571821
Alignment:
Q  64 cagttaactgcagccga-tttcaaattcctcgactgttaactaccgagggg-caaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaac 161  Q
    ||||||||||||||||| |||  ||||||||  | ||||||| |||||||| ||||||| ||| |||||  ||| ||| | ||||||  |||||||||||    
T  43571715 cagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttacttgtgtacctgaaccttatgtaatgtgtcaac 43571814  T
Q  162 aacaatt 168  Q
    |||||||    
T  43571815 aacaatt 43571821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 46406590 - 46406636
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  46406590 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 46406636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 47070549 - 47070495
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccga 80  Q
    ||||||||||||||||||||||| || | ||||||||  |||||||| |||||||    
T  47070549 agattttctcggcagttaactacggatgttttcctcggaagttaactacagccga 47070495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 49138688 - 49138642
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  49138688 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 49138642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 49268845 - 49268915
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaac 103  Q
    |||||||||||||||||| | |||||||| |||||||||||| || |||||  |||||||| || ||||||    
T  49268845 tcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctccacagttaac 49268915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 54392027 - 54392073
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  54392027 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 54392073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 1293451 - 1293410
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgc 74  Q
    |||||||||||||| |||||| |||||||| |||||||||||    
T  1293451 ctcggcagttaactcccgaggttttcctcggcagttaactgc 1293410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 4008315 - 4008368
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| |||||||||||||| |||||| ||| |||| ||||||||||| ||||    
T  4008315 agatttcctcggcagttaactcccgaggtttttctcgacagttaactgccgccg 4008368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 11270280 - 11270329
Alignment:
Q  30 tttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||| |||| | |||||| | ||||||||||||||||    
T  11270280 tttctcggcagttaactgccgaagttttccttggcagttaactgcagccg 11270329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 44227124 - 44227063
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||| ||||| |||||| ||| |||||| |||||  ||||||| |||||||||||||    
T  44227124 ggggcaaaatcgtattttactcgtgttcctcagtcttatcaaatgtgtgaacaacaattctc 44227063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 50604420 - 50604469
Alignment:
Q  34 tcggcagttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||| |||||    
T  50604420 tcggcagttaactgccgaggttttcctcggtagttaactgcagctgattt 50604469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 4015119 - 4015167
Alignment:
Q  24 gaagattttctcggcagttaactaccgaggctttcctcgccagttaact 72  Q
    |||| ||| |||||||||||||| |||||| |||||||| |||||||||    
T  4015119 gaagttttcctcggcagttaacttccgaggttttcctcggcagttaact 4015167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 10492872 - 10492924
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    |||||||||||||| |||| | |||||||| ||||||| |||||||| |||||    
T  10492872 ctcggcagttaactgccgaagttttcctcggcagttaattgcagccggtttca 10492924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 16851197 - 16851145
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    ||||| |||| |||||||| | |||||||| ||||||||| ||||||||||||    
T  16851197 ctcggtagtttactaccgaagttttcctcggcagttaactacagccgatttca 16851145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 34712760 - 34712804
Alignment:
Q  35 cggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||| |||||| ||||||||  |||||||||||||||    
T  34712760 cggcagttaactgccgaggttttcctcgggagttaactgcagccg 34712804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 45507402 - 45507446
Alignment:
Q  39 agttaactaccgaggctttcctcgccagttaactgcagccgattt 83  Q
    |||||||| |||||| ||||||||  |||||||||||||||||||    
T  45507402 agttaactgccgaggttttcctcggtagttaactgcagccgattt 45507446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 46347725 - 46347769
Alignment:
Q  38 cagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    ||||||| || ||||| |||||||| |||||||||||||||||||    
T  46347725 cagttaattatcgaggttttcctcggcagttaactgcagccgatt 46347769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 50957687 - 50957727
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcg 94  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  50957687 tttcctcggcagttaactgcagccggatttcaaattcctcg 50957727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 17345 - 17431
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagggg 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  17345 atttcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 17431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 3951 - 3820
Alignment:
Q  41 ttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactcatgtgcct 139  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||  ||||||||||| ||||||| ||||||||  ||||  ||| |||||  |||||||    
T  3951 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaaaatattttacttgtgtgcct 3852  T
Q  140 cagccttatagaatgtgtcaacaacaattctc 171  Q
    || ||||||  ||| |||||||| ||||||||    
T  3851 caaccttatccaatttgtcaacatcaattctc 3820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 5345 - 5218
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttcaaattcctcgactgttaactaccgaggggcaaaaacgtatattactca 132  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||| | ||||| | |||||||            |||||||     
T  5345 ctcggcagttaactaccgaggttttcctcggtagttaactgcagccggtttcaaattcttcggcagttaattgccgaggg-----------aattactcg 5257  T
Q  133 tgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  5256 tgtgcctcagccttatacaatgtgtcaacagcaattctc 5218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 905 - 824
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||||| | | ||||||| ||||||||    
T  905 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggg 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 5405 - 5354
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  5405 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 5354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 936 - 892
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaact 72  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||    
T  936 atttcctcggcagttaactaccgaggttttcctcggcagttaact 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 22477 - 22396
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccgagggg 113  Q
    ||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||||||||| | ||||||| ||||||||    
T  22477 ctcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggg 22396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 15954 - 16034
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagc-cgatttcaaattcctcgactgttaactaccgaggg 112  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||| | ||||||| |||||||    
T  15954 ctcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgaggg 16034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 11353 - 11235
Alignment:
Q  55 tttcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttatagaa 152  Q
    ||||||||  ||||||||||||||| | ||||||||||||| | ||||||| |||| |||| |||| ||||| |||||  |||| | |||||||||  ||    
T  11353 tttcctcggaagttaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcaaa 11254  T
Q  153 tgtgtcaacaacaattctc 171  Q
    ||||  |||| ||||||||    
T  11253 tgtgggaacagcaattctc 11235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 20111 - 20253
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccga-tttcaaattcctcgactgttaactac-cgaggggc-aaaaacgtatattac 129  Q
    ||||||||| ||||||||||| |||||||| |||||||||| |||||| |||  ||||||||| | ||||||| |   || ||| ||||||||| |||||    
T  20111 ctcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaactgctaaagaggcaaaaaacgtaaattac 20210  T
Q  130 tcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    || |||| |||||||||||  ||||||| |||| |||||||||    
T  20211 tcgtgtgtctcagccttatgcaatgtgtaaacatcaattctct 20253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 1723 - 1785
Alignment:
Q  110 ggggcaaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctct 172  Q
    |||||||||||||| ||||||| ||||||||||||||||  |||||||||||| |||||||||    
T  1723 ggggcaaaaacgtaaattactcgtgtgcctcagccttatgcaatgtgtcaacatcaattctct 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 4394 - 4479
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg 112  Q
    |||| ||||||||||||||||||||| ||||||||  | |||||||||||| || ||||||||||||| | ||||||| |||||||    
T  4394 atttcctcggcagttaactaccgaggatttcctcggtatttaactgcagccggagttcaaattcctcggcagttaactgccgaggg 4479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 433 - 573
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgaggg-gcaaaaacgtatattact 130  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||||| ||||   ||||| ||| | ||||||| ||||||| |||||| ||||| |||||    
T  433 ctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtattttact 532  T
Q  131 catgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    | |||  ||||| |||||  ||||||| |||| ||||||||    
T  533 cgtgtttctcagtcttatcaaatgtgtaaacatcaattctc 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 18099 - 17964
Alignment:
Q  39 agttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtg 136  Q
    |||||||| |||||| ||| |||| ||||||||||||||| | |||| ||||||||| | |||||||  ||| |||||||||||||| ||||||| ||||    
T  18099 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtg 18000  T
Q  137 cctcagccttatagaatgtgtcaacaacaattctct 172  Q
    || || | ||||  ||||||  |||| |||||||||    
T  17999 ccacaactttatcaaatgtgggaacatcaattctct 17964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 18285 - 18335
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    |||||||||||||||||||||||||||| |||| ||| |||| ||||||||    
T  18285 agattttctcggcagttaactaccgaggttttcttcgacagtaaactgcag 18335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 54745 - 54880
Alignment:
Q  39 agttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtg 136  Q
    |||||||| |||||| ||| |||| ||||||||||||||| | |||| ||||||||| | |||||||  ||| |||||||||||||| ||||||| ||||    
T  54745 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtg 54844  T
Q  137 cctcagccttatagaatgtgtcaacaacaattctct 172  Q
    || || | ||||  ||||||  |||| |||||||||    
T  54845 ccacaactttatcaaatgtgggaacatcaattctct 54880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 54559 - 54509
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcag 76  Q
    |||||||||||||||||||||||||||| |||| ||| |||| ||||||||    
T  54559 agattttctcggcagttaactaccgaggttttcttcgacagtaaactgcag 54509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 25960 - 25886
Alignment:
Q  98 gttaactaccgaggggc-aaaaacgtatattactcatgtgcctcagccttatagaatgtgtcaacaacaattctc 171  Q
    ||||||||||||||| | |||||| || ||||||| | ||||||||||||||  |||||||||||||||||||||    
T  25960 gttaactaccgagggcccaaaaacataaattactcgtatgcctcagccttatgcaatgtgtcaacaacaattctc 25886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 872 - 779
Alignment:
Q  57 tcctcgccagttaactgcagccg-atttcaaattcctcgactgttaactaccga-ggggcaaaaacgtatattactcatgtgcctcagccttat 148  Q
    |||||| |||||||||||||||| ||||| ||||| ||| | ||||| |||||| |||||||||||||| ||||||| |||||| || ||||||    
T  872 tcctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtgccacaaccttat 779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 417 - 473
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  417 atttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttc 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 7301 - 7444
Alignment:
Q  31 ttctcggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg-ggcaaaaacgtatatta 128  Q
    ||||||||||||||||||||||| ||| |||| ||||| | ||||||| | |||  ||||||||  |  ||||||  | ||| ||||||||| ||| |||    
T  7301 ttctcggcagttaactaccgaggtttttctcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaaggaggcaaaaacatatttta 7400  T
Q  129 ctcatgtgcctcagccttatagaatgtgtcaac-aacaattctc 171  Q
    ||||||||||||| ||||||  ||| ||||||| ||||||||||    
T  7401 ctcatgtgcctcaaccttatgaaatttgtcaactaacaattctc 7444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 15616 - 15667
Alignment:
Q  28 attttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||| ||||    
T  15616 attttctcggcagttaactaccaaggttttcctcggcagttaactgccgccg 15667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 232831 - 232878
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccga 80  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  232831 ctcggcagttaactaccgaggttttcctcggcagttaattgcagccga 232878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 12387 - 12433
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  12387 ctcggcagttaactaccgaggttttcatcggcagttaactgcagccg 12433  T

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Target: scaffold0199; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 10726 - 10680
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| || ||||| ||||||||||| ||||    
T  10726 ctcggcagttaactaccgaggtttccctcggcagttaactgccgccg 10680  T

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Target: scaffold0101 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 36533 - 36579
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  36533 ctcggcagttaactaccgaggttttcctcggcagttaattgcagccg 36579  T

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Target: scaffold0101; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 41014 - 41072
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    |||||| |||||||||||||| |||||| |||||||| ||||||||||| |||| ||||    
T  41014 agatttcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttc 41072  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 50121 - 50075
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  50121 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccg 50075  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 65392 - 65343
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatt 82  Q
    |||||||||||||| |||| | |||||||| |||||||||||||||||||    
T  65392 ctcggcagttaactgccgaagttttcctcgacagttaactgcagccgatt 65343  T

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Target: scaffold0513 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 8270 - 8194
Alignment:
Q  36 ggcagttaactaccgaggctttcctcgccagttaactgcagcc-gatttcaaattcctcgactgttaactaccgagg 111  Q
    |||||||||||||||||| |||| ||  |||||||||||| || |||||||||||||| | | ||||||| ||||||    
T  8270 ggcagttaactaccgaggttttcttcagcagttaactgcatccggatttcaaattccttggcagttaactgccgagg 8194  T

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Target: scaffold0293 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 721 - 772
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttc 84  Q
    ||||||||||||||||||||| |||||| | ||||||||||| |||| ||||    
T  721 ctcggcagttaactaccgaggttttcctgggcagttaactgccgccggtttc 772  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 84654 - 84608
Alignment:
Q  33 ctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    ||||||||||||||||||||| |||||||| || |||||||| ||||    
T  84654 ctcggcagttaactaccgaggttttcctcggcacttaactgccgccg 84608  T

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Target: scaffold0634 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 7499 - 7446
Alignment:
Q  26 agattttctcggcagttaactaccgaggctttcctcgccagttaactgcagccg 79  Q
    |||||| ||||||||||||||||||||| ||||||||  ||| |||||| ||||    
T  7499 agatttcctcggcagttaactaccgaggttttcctcggtagtcaactgccgccg 7446  T

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Target: scaffold0260 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 11832 - 11792
Alignment:
Q  55 tttcctcgccagttaactgcagcc-gatttcaaattcctcg 94  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  11832 tttcctcggcagttaactgcagccggatttcaaattcctcg 11792  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 68456 - 68400
Alignment:
Q  29 ttttctcggcagttaactaccgaggctttcctcgccagttaactgcagccgatttca 85  Q
    ||||||||| |||| |||||||| | ||||||||  ||||||||||||||| |||||    
T  68456 ttttctcggtagtttactaccgaagttttcctcggtagttaactgcagccggtttca 68400  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 235969 - 235933
Alignment:
Q  37 gcagttaactaccgaggctttcctcgccagttaactg 73  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  235969 gcagttaactaccgaggttttcctcggcagttaactg 235933  T

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