View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1509-Insertion-14 (Length: 150)
Name: NF1509-Insertion-14
Description: NF1509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1509-Insertion-14 |
 | |
|
| [»] chr7 (1 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 116; Significance: 2e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 32709433 - 32709572
Alignment:
| Q |
11 |
cagactattcttaccttacggctaaactctcgattgctatgactgattttcctttagaaccagaaggttaacgctaaaaagaaaatgaagattcatctat |
110 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32709433 |
cagactattcttaccttacggccaaactctggattactatgactgatttttctttagaaccataaggttaacgctaaaaagaaaatgaagattcatctat |
32709532 |
T |
|
| Q |
111 |
cttctttctatcaaagtaaatttttaccagtccatcatag |
150 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
32709533 |
cttctttctatcatagtaaatttttaccagtccatcatag |
32709572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University