View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15095_low_4 (Length: 296)
Name: NF15095_low_4
Description: NF15095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15095_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 21 - 281
Target Start/End: Complemental strand, 22807309 - 22807049
Alignment:
| Q |
21 |
agattgtatgcatatggaattggtgttgtttatgcatgaatgtttagcaagggtgaaagaggaaagcataagttgttttgcagaagtgattaattggtaa |
120 |
Q |
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| T |
22807309 |
agattgtatgcatatggaattggtgctgtttatgcatgaatggttagcaagggtgaaagaggaaagcataagttgtttttcagaagtgattaattggtaa |
22807210 |
T |
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| Q |
121 |
ttaagctgttttaataagttattttatagcttaattctgtttaggttggtactggaattgattgtgaggattatagccgagttttatggaaaattagtta |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22807209 |
ttaagctgttttaataagttattttatagcttaattctgtttaggttggtactggaattgattgtgaggattatagccgagttttatggaaaattagtta |
22807110 |
T |
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| Q |
221 |
aaaattcatatggcagtgcaggtgttaatcaggtcatagcagttgctgtgtagcccatact |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22807109 |
aaaattcatatggcagtgcaggtgttaatcaggtcatagcagttgctgtgtagcccatact |
22807049 |
T |
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