View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15096_high_1 (Length: 1088)
Name: NF15096_high_1
Description: NF15096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15096_high_1 |
 | |
|
| [»] scaffold0425 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 717; Significance: 0; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 717; E-Value: 0
Query Start/End: Original strand, 12 - 1072
Target Start/End: Complemental strand, 8455582 - 8454522
Alignment:
| Q |
12 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataatctgaaa |
111 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
8455582 |
atatgtgaagaagtggcttgatgatcttaaacatgttgtttatgaagcagaccaactattagatgagatttctactgatgcaatgctaaataacctgaaa |
8455483 |
T |
|
| Q |
112 |
gctgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggataaactag |
211 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8455482 |
gcagaatctgaaccacttaccaccaatttattgggcttggtttcagctttatctagaaatccatttgaatctaggctcaatgaacaactggataaactag |
8455383 |
T |
|
| Q |
212 |
aacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggttgtcatc |
311 |
Q |
| |
|
|| ||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8455382 |
aatttcttgcaaagaaaaggaaagagttgagattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcaaaaaggttgtcatc |
8455283 |
T |
|
| Q |
312 |
cacagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgtt |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8455282 |
tacagctctcgtggatgagtcgagcatatatggtcgagatgttgataaggaaaaattaatcaagtttttacttgcaggcaatgatagtggcaaccaggtt |
8455183 |
T |
|
| Q |
412 |
ccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaag |
511 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| | |||| |||||||||||||| || |||||||| ||||||| |
|
|
| T |
8455182 |
ccaataatcagcatagtcggtttaggagggatgggtaaaaccacccttgctaagcttgtgtacaatgacaacaagataaaggagcattttgaacttaaag |
8455083 |
T |
|
| Q |
512 |
catgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatact |
611 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8455082 |
catgggtctatgtttcagaatcttttgatgttgttggactcaccaaagcaattctcaagtcgtttaattcttcagcagatggtgaagacttaaatctact |
8454983 |
T |
|
| Q |
612 |
acaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttctt |
711 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||| ||||||| ||| |
|
|
| T |
8454982 |
ccaacatcaactccaatacatgctaatgggcaagaaatatttgcttgttttagacgatatctggaacggggatgcggaacgttgggagttgttactactt |
8454883 |
T |
|
| Q |
712 |
ccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttac |
811 |
Q |
| |
|
||||||||||||||||||| |||||| |||||| | || ||||| ||||| |||||||| |||||| ||||| ||||||| || ||||||||||||||| |
|
|
| T |
8454882 |
ccctttaaccatggatcttttggaagtaagattgtcgtgacaacacgtgagaaggaggtggcagataatgtcctgaaatcgacagagttatttgatttac |
8454783 |
T |
|
| Q |
812 |
aacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaa |
911 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||||||||||||| || |||| || |||||||| ||||||||||||| |||| || || |
|
|
| T |
8454782 |
aacaattggacaaaagcaattgttggagtttatttgtgacacatgcttttcaaggaaagagtgtgtctgaatatccaaatcttgaatcagttggtagaaa |
8454683 |
T |
|
| Q |
912 |
aatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggag |
1011 |
Q |
| |
|
||||||| | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| || || |||| |||||| | ||||||||| |
|
|
| T |
8454682 |
aatagtggaaaagtgtggagggttgcctttagctataaaatcattgggccaacttctgcggaaaacattttctgaacatgaatggattaatatattggag |
8454583 |
T |
|
| Q |
1012 |
actgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
||||||||||||||||||||| | || |||| | |||||||||||||||||||||||| |
|
|
| T |
8454582 |
actgatatgtggcgtttatcaaaagtagatcacaacgttaactcagtactgagattgagtt |
8454522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 715; E-Value: 0
Query Start/End: Original strand, 6 - 1072
Target Start/End: Complemental strand, 8590663 - 8589597
Alignment:
| Q |
6 |
aagcatatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataat |
105 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8590663 |
aagcaaatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctactgatgcaatgctaaataag |
8590564 |
T |
|
| Q |
106 |
ctgaaagctgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggata |
205 |
Q |
| |
|
||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
8590563 |
ctgaaagctaaatctgaaccacttagcagcaatttattgggcttggtttcagctttaactacaaatccatttgaaaccaggctcaatgaacaactggata |
8590464 |
T |
|
| Q |
206 |
aactagaacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggtt |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8590463 |
aactagaacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccctgtgctagtaacgaaggcttagtcagttggaaaccttcaaaaaggtt |
8590364 |
T |
|
| Q |
306 |
gtcatccacagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaac |
405 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
8590363 |
gtcatctacagctcttgtggatgagtcgagcatatatggtagagatgttgataagaaaaaactaatcaagtttttacttgcaggcaatgatagtggcaac |
8590264 |
T |
|
| Q |
406 |
catgttccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatc |
505 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| |||||||| | |
|
|
| T |
8590263 |
cgcgttccaataatcagcatagtcggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagatagaagagcattttgagc |
8590164 |
T |
|
| Q |
506 |
ttaaagcatgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaa |
605 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
8590163 |
ttaaagcatgggtctatgtttctgaatcttttgatgttgttggactcaccaaagcaattatcaattcatttaattcttcagcagatggtgaagacttgaa |
8590064 |
T |
|
| Q |
606 |
tatactacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgtta |
705 |
Q |
| |
|
| |||| |||||| || | || |||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
8590063 |
tctactccaacatcaattgcagcacatactaacaggcaagaaatacttgcttgttttagacgatatctggaacgggaatgcagaatgttgggagcagtta |
8589964 |
T |
|
| Q |
706 |
cttcttccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttg |
805 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||| |||||| | || ||||| |||||||||||||||||| ||||||| | ||||||||||||||||||| |
|
|
| T |
8589963 |
ctacttccctttaaccatggattttctggaagtaagattgtcgtgacaacacgtgaaaaggaggtagcatatcatgttcttaaatccaccaagttatttg |
8589864 |
T |
|
| Q |
806 |
atttacaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattgg |
905 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||| || | || ||||||||||| |||||||||||||| ||| |
|
|
| T |
8589863 |
atttacaacaattggacaaaagcgattgttggagtttatttgtgacacatgcttttcaaggaaagaatgtgtgtgaatatccaaatcttgaatcaactgg |
8589764 |
T |
|
| Q |
906 |
caggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagata |
1005 |
Q |
| |
|
|| ||||||| || | |||||||||||| ||||||||||| |||||||| |||||||||| ||||| | ||| ||| ||||| |||| |||||| ||||| |
|
|
| T |
8589763 |
caagaaaatactggataagtgtggagggttgcctttagctgtaaaatcaatgggccaactcttgcgaagaaatttttctcaacatgagtggattaagata |
8589664 |
T |
|
| Q |
1006 |
ttggagactgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |||| ||| |||||||| |||||||| |||| |
|
|
| T |
8589663 |
ttggagactaatatgtggcgtttatcagatggggaacacagcataaactcagttctgagattaagtt |
8589597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 691; E-Value: 0
Query Start/End: Original strand, 14 - 1072
Target Start/End: Complemental strand, 6948195 - 6947137
Alignment:
| Q |
14 |
atgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataatctgaaagc |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
6948195 |
atgtgaagaagtggcttgatgaacttaaacatgttgtctatgaggcagaccaactgttagatgagatttctactgatgcaatgctaaataagctgaaagc |
6948096 |
T |
|
| Q |
114 |
tgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggataaactagaa |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||| |
|
|
| T |
6948095 |
tgaatctgaaccacttaccaccaatttattgggcttggtttcagctttaactacaaatccatttgaatgtaggctcaatgaacagctcgataaactagaa |
6947996 |
T |
|
| Q |
214 |
cttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggttgtcatcca |
313 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||| | |
|
|
| T |
6947995 |
cttcttgcaaagaaaaagaaagagttgggattgggagaaagtccttgcgctagtaatgaaggcttagtcagttggaaaccttcaaaaagattgtcatcta |
6947896 |
T |
|
| Q |
314 |
cagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgttcc |
413 |
Q |
| |
|
|||||||| |||||||||| | ||||||||||||||||| |||||| || || |||| ||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
6947895 |
cagctctcatggatgagtcaaccatatatggtagagatgatgataaggacaagttaatcaagtttttacttgcaggcaatgacagtggcaaccaggttcc |
6947796 |
T |
|
| Q |
414 |
aataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaagca |
513 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| | || |||||||| |||||| || |
|
|
| T |
6947795 |
aataatcagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaatgacaacaagatagaggagcattttgaccttaaaaca |
6947696 |
T |
|
| Q |
514 |
tgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatactac |
613 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| | |
|
|
| T |
6947695 |
tgggtctacgtttcagaatcttttgatgttgttggactcaccaaagcaattctcaagtcatttaattcttcagcagatggtgaagacttgaatctactcc |
6947596 |
T |
|
| Q |
614 |
aacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttcttcc |
713 |
Q |
| |
|
||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6947595 |
aacatcaactccaacacatgttaatgggaaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttcttcc |
6947496 |
T |
|
| Q |
714 |
ctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttacaa |
813 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| || ||||| ||||||||||||| |||| ||||||| || ||||||||| ||||||||||||||||| |
|
|
| T |
6947495 |
ctttaaccatggatcttctggaagtaagattatcgtgacaactcgtgaaaaggaggcagcatatcatgttttaaaatccaccgagttatttgatttacaa |
6947396 |
T |
|
| Q |
814 |
caattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaaaa |
913 |
Q |
| |
|
|||||| | | |||| |||||||||||||||||| || |||||||||||||||| ||| |||||| ||| ||| |||||||||||||| ||||||| |
|
|
| T |
6947395 |
caattgaaaacaagccattgttggagtttatttgagacacatgcttttcaaggcatgcgtgtgtgtgacgatccaaaacttgaatcaattgggaggaaaa |
6947296 |
T |
|
| Q |
914 |
tagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggagac |
1013 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
6947295 |
tagtggacaagtgtggagggttgcctttagctataaaatcactgggccaacttttgcgaaaaaagttttctcaagatgaatggatgcagatattggagac |
6947196 |
T |
|
| Q |
1014 |
tgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
|||||||||||| |||| |||| ||||| ||| ||||| |||| ||||||||||||| |
|
|
| T |
6947195 |
tgatatgtggcgattattagacggggacaacaaaattaatccagtgctgagattgagtt |
6947137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 669; E-Value: 0
Query Start/End: Original strand, 12 - 1072
Target Start/End: Complemental strand, 6736918 - 6735858
Alignment:
| Q |
12 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataatctgaaa |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
6736918 |
atatgtgaagaagtggcttgatgaacttaaacatgttctttatgaagcagaccaactattggatgagatttctactgatgcaatgctaaataaggtgaaa |
6736819 |
T |
|
| Q |
112 |
gctgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggataaactag |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||| |
|
|
| T |
6736818 |
gctgaatctgaaccacttaccaccaatttattgggcttggtttcagctttaactacaaatccatttgaatgtaggctcaatgaacagctcgataaactag |
6736719 |
T |
|
| Q |
212 |
aacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggttgtcatc |
311 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6736718 |
aacttcttgcaaagcaaaagaaagatttgagattgggagaaggtcctagtgctagtaatgaaggcttagtcagttggaaaccttcaaaaaggttgtcatc |
6736619 |
T |
|
| Q |
312 |
cacagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgtt |
411 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| ||| |
|
|
| T |
6736618 |
tacagctctcctggatgagtcaagcatatatggtagagatgatgataaggaaaaactaatcaagtttttacttacaggcaatgacagtggcaaccaggtt |
6736519 |
T |
|
| Q |
412 |
ccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaag |
511 |
Q |
| |
|
|||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
6736518 |
ccaataattagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagataaagaagcattttgaacttaaag |
6736419 |
T |
|
| Q |
512 |
catgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatact |
611 |
Q |
| |
|
||||||||||||||| |||||||| |||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||| ||| |
|
|
| T |
6736418 |
catgggtctatgtttcagaatctttcgatgtttttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaagacttgaatcaact |
6736319 |
T |
|
| Q |
612 |
acaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttctt |
711 |
Q |
| |
|
|||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| || ||||| |||||||| | |||| ||| |
|
|
| T |
6736318 |
ccaacatcaactccaacacatgttaatgggaaagaaatacttgcttgttttagatgatatctggaatgggagtgtagaatattgggagcagctactactt |
6736219 |
T |
|
| Q |
712 |
ccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttac |
811 |
Q |
| |
|
|| ||||||||||||||||||||||| || ||||| || ||||| |||||||||||||||||| |||||| | ||||| ||| | ||||||||||||| |
|
|
| T |
6736218 |
ccgtttaaccatggatcttctggaagtaaaattatcgtgacaacacgtgaaaaggaggtagcatgtcatgttctaaaatcaaccgaattatttgatttac |
6736119 |
T |
|
| Q |
812 |
aacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaa |
911 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| || ||||| |||||||| ||||||| |||||||||| |||||||||||||||||| | ||| |
|
|
| T |
6736118 |
aacaattggaaaaaagcaattgttggagattatttgtgacacatgcgtttcaaggaaaaagtgtttgtgaatatccaaatcttgaatcaattgggaagaa |
6736019 |
T |
|
| Q |
912 |
aatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggag |
1011 |
Q |
| |
|
||||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| || || || |||| |||||| ||||||||||| |
|
|
| T |
6736018 |
aatagtggagaagtgtggagggttgcctctagctataaaatcattgggccaacttttgcgtaaaaaactttctgaacatgaatggattaagatattggag |
6735919 |
T |
|
| Q |
1012 |
actgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
6735918 |
actgatatgtggcgtttatcagatggggaccacaacattaactcagtactaagattgagtt |
6735858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 649; E-Value: 0
Query Start/End: Original strand, 12 - 1072
Target Start/End: Original strand, 6553539 - 6554599
Alignment:
| Q |
12 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataatctgaaa |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| | ||| |
|
|
| T |
6553539 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaggcagaccaactattagatgagatttctactgatgcaatgataaataagcaaaaa |
6553638 |
T |
|
| Q |
112 |
gctgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggataaactag |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6553639 |
gctgaatctgaaccacttaccaccaatttattgggtttcgtttcagctttaactacaaatccatttgaatgtaggctcaatgaacaactggataaactag |
6553738 |
T |
|
| Q |
212 |
aacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggttgtcatc |
311 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
6553739 |
aacttcttgcaaagcaaaagaaagatttgagattgggagaaggtcctagtgctagtaatgaaggcttagtcagttggaaaccttcaaaaaggttgtcgtc |
6553838 |
T |
|
| Q |
312 |
cacagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgtt |
411 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||| ||||||||||||| ||||||||| ||||||||| ||| |
|
|
| T |
6553839 |
tacagctctcgtggatgagtcaagcatatatggtagggatgttgataaggaaaaattaatcaagtttttacttgaaggcaatgacggtggcaaccgggtt |
6553938 |
T |
|
| Q |
412 |
ccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaag |
511 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
6553939 |
ccaataatcagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagataaagaagcattttgaacttaaag |
6554038 |
T |
|
| Q |
512 |
catgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatact |
611 |
Q |
| |
|
||||||||||||||| |||||||| |||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||| |||| || ||| |
|
|
| T |
6554039 |
catgggtctatgtttcagaatctttcgatgtttttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaatacttggatcaact |
6554138 |
T |
|
| Q |
612 |
acaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttctt |
711 |
Q |
| |
|
|||||| |||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| || ||||| |||||||| | |||| ||| |
|
|
| T |
6554139 |
ccaacatcaactccaagacatgctaatgggaaagaaatacttgcttgttttagatgatatatggaatgggagtgtagaatattgggagcagctactactt |
6554238 |
T |
|
| Q |
712 |
ccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttac |
811 |
Q |
| |
|
|| ||||||||||||||||||||||| | |||||| || ||||| |||||||||||||||||| |||||| | ||||| ||||| ||||||||||||| |
|
|
| T |
6554239 |
ccgtttaaccatggatcttctggaagtatgattatcgtgacaacacgtgaaaaggaggtagcatgtcatgttctaaaatcaaccaaattatttgatttac |
6554338 |
T |
|
| Q |
812 |
aacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaa |
911 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| || |||||||||||||| ||||||| ||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
6554339 |
aacaattggaaaaaagcaattgttggagattatttgtgacacatgcttttcaaggaaaaagtgtgtgtgaatatccaaatcttgaaacaattgggaggaa |
6554438 |
T |
|
| Q |
912 |
aatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggag |
1011 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||| |||||| ||| ||||| || || || |||| |||||| ||||||||||| |
|
|
| T |
6554439 |
aatagtggacaagtgtggagggttgcctttagctataaaatcattggcacaacttctgcataaaaaaatttctgaacatgaatggattaagatattggag |
6554538 |
T |
|
| Q |
1012 |
actgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
6554539 |
actgatatgtggcgtttatcagatggggaccacaacattaactcagtactaagattgagtt |
6554599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 632; E-Value: 0
Query Start/End: Original strand, 9 - 1072
Target Start/End: Original strand, 6479080 - 6480143
Alignment:
| Q |
9 |
catatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataatctg |
108 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |
|
|
| T |
6479080 |
catatatgtgaagaagtggcttgataaacttaaacatgttgtttatgaagcagaccaactattagatgagatatctactgatgcaatgctaaataagctg |
6479179 |
T |
|
| Q |
109 |
aaagctgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggataaac |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6479180 |
aaagctgaatctgaaccacttaccaccaatttattgggcgtggtttcagctttaactacaaatccatttgaatctaggctcaatgaacaactggataaac |
6479279 |
T |
|
| Q |
209 |
tagaacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggttgtc |
308 |
Q |
| |
|
||||| ||||||||| ||||||| | ||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
6479280 |
tagaatttcttgcaatgcaaaagtaggtgttgggattggcagaaggtcccagtgctagtaatgaaggcttagtcagttggaaaccttcaaaaagattgtc |
6479379 |
T |
|
| Q |
309 |
atccacagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccat |
408 |
Q |
| |
|
||| || ||||||||||||||||| ||||||||||| ||||||||||| || ||| |||| || || |||||||||||||||||||| ||||| | ||| |
|
|
| T |
6479380 |
atctacggctctcgtggatgagtccagcatatatggcagagatgttgacaaggaagaacttatcaaatttttacttgcaggcaatgacagtggaacccag |
6479479 |
T |
|
| Q |
409 |
gttccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatctta |
508 |
Q |
| |
|
||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| | || |||||||| |||| |
|
|
| T |
6479480 |
gttccgataatcagcatagttggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaacaacaacaagatagaggaacattttgaactta |
6479579 |
T |
|
| Q |
509 |
aagcatgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatat |
608 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||| |||| || |
|
|
| T |
6479580 |
aagcatgggtctatgtttcagaatcttatgatgttgttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaatacttggatca |
6479679 |
T |
|
| Q |
609 |
actacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttactt |
708 |
Q |
| |
|
||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||| | |||||||| |||||| |
|
|
| T |
6479680 |
actccaacatcaactccaacacatgttaatgggaaagaaatacttgcttgttttagatgatatctggaatgggaatgtagagtattgggagcagttacta |
6479779 |
T |
|
| Q |
709 |
cttccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatt |
808 |
Q |
| |
|
||||| |||||||||||||||| |||||| |||||||| || ||||| |||||||||||||| ||| |||||||| |||||||||||| ||||| |||| |
|
|
| T |
6479780 |
cttccatttaaccatggatcttttggaagtaagattatcgtgacaacacgtgaaaaggaggtggcatatcatgtcgtgaaatccaccatgttatgtgatc |
6479879 |
T |
|
| Q |
809 |
tacaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcag |
908 |
Q |
| |
|
||| ||||||| ||||| |||||||||| |||||||| || ||||||||||||||||| |||| |||||| |||| ||| ||||||||||||||||| |
|
|
| T |
6479880 |
tacgtcaattggtcaaaagtgattgttggagattatttgtgactcatgcttttcaaggcaagagtgtgtgtgactatccaaaacttgaatcaattggcag |
6479979 |
T |
|
| Q |
909 |
gaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattg |
1008 |
Q |
| |
|
||||||| || ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
6479980 |
gaaaataatggacaagtgtgaagggttgcctttagctataatatcattgggccaacttttgcggaaaaagttttctcaagatgaatggatgaagatattg |
6480079 |
T |
|
| Q |
1009 |
gagactgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| ||||| |||| ||||||||||||| |
|
|
| T |
6480080 |
gagactgatatgtggcgtttatcagacgtggacaacaaaattaatccagtgctgagattgagtt |
6480143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 12 - 1072
Target Start/End: Original strand, 6519263 - 6520323
Alignment:
| Q |
12 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataatctgaaa |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||| |
|
|
| T |
6519263 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctactgatgcaatgatatataagttgaaa |
6519362 |
T |
|
| Q |
112 |
gctgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggataaactag |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| | ||||| |
|
|
| T |
6519363 |
gctgaatctgaaccacttaccaccaatttatttggctgggtttcagctttaactggaaatccatttgaatctaggctcaataaactactggagacactag |
6519462 |
T |
|
| Q |
212 |
aacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggttgtcatc |
311 |
Q |
| |
|
|| ||||||| | |||| ||||| | ||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| || | |||||||| |
|
|
| T |
6519463 |
aatctcttgcacaacaaacgaaaaggctgggattggaagttggtccttgtgctagtaatgaaggcttagtcagttggaaaccttcaaaacgattgtcatc |
6519562 |
T |
|
| Q |
312 |
cacagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgtt |
411 |
Q |
| |
|
||| |||| ||||||||||| ||| ||| ||||||||||||| |||| ||||||||| | || |||||||||||| |||| ||||| ||||| ||| |
|
|
| T |
6519563 |
tacatctcttgtggatgagtcaagcttatgtggtagagatgttcataaggaaaaactagtgaaacttttacttgcagacaataccagtggtaaccaggtt |
6519662 |
T |
|
| Q |
412 |
ccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaag |
511 |
Q |
| |
|
|||||||||||| |||| ||||||||||| ||||| ||||||||||||||| | | || |||| ||||||| || ||| | |||||||| ||||||| |
|
|
| T |
6519663 |
ccaataatcagcatagtgggtttaggaggaatgggtaaaaccacccttgctcaacatgtctacaatgacaacatgacaaagaagcattttgaacttaaag |
6519762 |
T |
|
| Q |
512 |
catgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatact |
611 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||| |||| || ||| |
|
|
| T |
6519763 |
catgggtctatgtttcagaatcttttgatgatgttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaatacttggatcaact |
6519862 |
T |
|
| Q |
612 |
acaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttctt |
711 |
Q |
| |
|
|||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||| | | ||||| ||||| |||||| ||| |
|
|
| T |
6519863 |
ccaacatcaactccaacacctgctaatggcaaagaaatacttgcttgttttagatgatatctggaatgggaaggtagaatactgggataagttactactt |
6519962 |
T |
|
| Q |
712 |
ccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttac |
811 |
Q |
| |
|
|| |||||||||||||||||||||| |||||||| || ||||| ||||||||| ||||||||||||||||| |||| |||||| ||||| || |||||| |
|
|
| T |
6519963 |
ccgcttaaccatggatcttctggaagtaagattatcgtgacaacacgtgaaaagaaggtagcagatcatgtcctgaactccaccgagttaattcatttac |
6520062 |
T |
|
| Q |
812 |
aacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaa |
911 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||| || |||||||||||||||| ||| |||||| |||| ||| |||||| | ||||||| ||| |
|
|
| T |
6520063 |
atcaattggacaaaagcaattgttggagtttatttgagacacatgcttttcaaggcatgcgtgtgtgtgactatccaaaacttgaaacgattggcatgaa |
6520162 |
T |
|
| Q |
912 |
aatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggag |
1011 |
Q |
| |
|
||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
6520163 |
aatagtggacaagtgtggtgggttgcctttagctataaaatcattgggccaacttttgcgaaaaaagttttctcaagatgaatggatggagatattggag |
6520262 |
T |
|
| Q |
1012 |
actgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
6520263 |
actgatatgtggcgtttatcagacagagaccacaccattaactcagtattgagattgagtt |
6520323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 415 - 1072
Target Start/End: Original strand, 6448286 - 6448948
Alignment:
| Q |
415 |
ataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaagcat |
514 |
Q |
| |
|
||||||||| |||| ||| | || |||||||| || ||||| |||||||||||| | |||| |||||| |||||| || |||||||| |||||| | | |
|
|
| T |
6448286 |
ataatcagcatagtgggtctgggtgggatgggtaagaccacttttgctaagcttgtgtacaatcacaacatgataaaggagcattttgaacttaaatctt |
6448385 |
T |
|
| Q |
515 |
gggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatactaca |
614 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| ||| |||| || |
|
|
| T |
6448386 |
gggtctatgtttcagaatattttgatgttgttggactcaccaaagcaatcctaaagtcatttaattcttcagcagatggtgaagacttgaatctactcca |
6448485 |
T |
|
| Q |
615 |
acataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttcttccc |
714 |
Q |
| |
|
|||| |||| ||||||||||||| | ||||||||||| ||||||||||| || |||||||||||| |||||||| ||||||||| | |||| ||||| |
|
|
| T |
6448486 |
acatgaactgcaacacatactaacaagaaagaaatactttcttgttttagacgacatctggaacgggaatgcagaacgttgggagcaggtactgcttccg |
6448585 |
T |
|
| Q |
715 |
tttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtc-----ttgaaatccaccaagttatttgattt |
809 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
6448586 |
tttaaccatggatcttctggaagtaagattattgtgacaacacgtgaaaaggaggtagcatatcatgtcctgaaatgaaatccaccaagttatttgattt |
6448685 |
T |
|
| Q |
810 |
acaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcagg |
909 |
Q |
| |
|
||| |||||||| |||||||||||||||||||| ||| | || ||||||||||| || || |||| ||||||||||| || ||||||||||||||| ||| |
|
|
| T |
6448686 |
acaccaattggacaaaagcaattgttggagtttgtttttgacacatgcttttcatggaaagagtgtgtgtgaatatccaattcttgaatcaattggtagg |
6448785 |
T |
|
| Q |
910 |
aaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattgg |
1009 |
Q |
| |
|
|||||| |||||| |||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||||| ||||||||| |
|
|
| T |
6448786 |
aaaatattgaacatgtgtggagggttgcctttagctataaaatcactgggccaacatttgcggaaaaagttttctcaagatgaatggatgaagatattgg |
6448885 |
T |
|
| Q |
1010 |
agactgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
6448886 |
agactgatatgtggcgtttatcagacagagaccattccattaactcagtactgagattgagtt |
6448948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 322 - 1034
Target Start/End: Complemental strand, 5299349 - 5298640
Alignment:
| Q |
322 |
gtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgttccaataatca |
421 |
Q |
| |
|
|||||||| |||||||||||||| ||||||| ||| ||||| || ||| || ||||||||| | | || ||| |||| ||| ||| |||||||||| |
|
|
| T |
5299349 |
gtggatgaatcgagcatatatggcagagatggtgacaaagaggaagtaaccaaatttttactttccgacatagatgctggcgaccgtgtaccaataatca |
5299250 |
T |
|
| Q |
422 |
gcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaagcatgggtcta |
521 |
Q |
| |
|
|| |||| ||| |||| || ||||| ||||||||||||||| | |||| | |||| |||||| |||| | | || ||||| || ||||| |||||||| |
|
|
| T |
5299249 |
gcatagtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatacagaaacagtttgaactaaaagcctgggtcta |
5299150 |
T |
|
| Q |
522 |
tgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatactacaacataaa |
621 |
Q |
| |
|
||||| ||| ||||| ||||||||||||| || ||||||||| ||||||| | ||||| ||||||||||||||||| ||| |||| |||||| || |
|
|
| T |
5299149 |
tgtttcggaaacttttaatgttgttggacttaccaaagcaattttacggtcatttcactcttcggcagatggtgaagacttgaatctactccaacatcaa |
5299050 |
T |
|
| Q |
622 |
ctccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttcttccctttaacc |
721 |
Q |
| |
|
| || || | ||||| || |||||||| |||||||||| |||||| |||||||||| ||| ||||||||||||| ||||| ||||| |||||| |
|
|
| T |
5299049 |
ttgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaaca |
5298950 |
T |
|
| Q |
722 |
atggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttacaacaattgga |
821 |
Q |
| |
|
|||||||| | ||||| |||||||| || || || ||||| ||||||||||| |||| || |||| |||||||| | || |||| | |||||| | |
|
|
| T |
5298949 |
atggatctaccggaagtaagattattgtgaccacacgtgacaaggaggtagc--atca-gttatgaagtccaccaaacttcttcatttgaagcaattgaa |
5298853 |
T |
|
| Q |
822 |
taaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaaaatagtgaac |
921 |
Q |
| |
|
|| || | ||||||||| | ||||| | || |||||||| |||| || || ||||||||| |||||||||||||||||||| |||||| || | |
|
|
| T |
5298852 |
gaagagtgaatgttggagtatgtttgtgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaa |
5298753 |
T |
|
| Q |
922 |
aagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggagactgatatgt |
1021 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||| ||||||| | || ||||| | ||| || ||||| ||| ||| || ||||||||||||| ||| ||| |
|
|
| T |
5298752 |
aagtgtggagggttgcctctagctgtaaaagcattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgt |
5298653 |
T |
|
| Q |
1022 |
ggcgtttatcaga |
1034 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
5298652 |
ggtgtttatcaga |
5298640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 397 - 1072
Target Start/End: Complemental strand, 5250712 - 5250040
Alignment:
| Q |
397 |
agtggcaaccatgttccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatc |
496 |
Q |
| |
|
|||||||| ||||| |||||||||||| |||| ||| | || || ||||| || ||||| |||||| |||||||| |||||||| ||| ||| | || | |
|
|
| T |
5250712 |
agtggcaatcatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgcgtacaacgaccacaggatgcaggagc |
5250613 |
T |
|
| Q |
497 |
attttgatcttaaagcatgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtga |
596 |
Q |
| |
|
||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||| | |||||| | |||||| |||||| ||| |
|
|
| T |
5250612 |
attttgaacttaaagcttgggtctatgtttcagaaacttttgatgttgttggactcaccaaagcaattatgagctcatttcactcttcaacagatgctga |
5250513 |
T |
|
| Q |
597 |
agacttaaatatactacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgg |
696 |
Q |
| |
|
||| || ||| |||| ||| || |||| | || | ||||| || |||||||| | |||||||| |||||| ||||||| ||| || ||||||||| |
|
|
| T |
5250512 |
agagttcaatctactccaatatcaactgcggcagagactaacaggtaagaaatatcttcttgttttggatgatgtctggaatgggagtgtggaatgttgg |
5250413 |
T |
|
| Q |
697 |
gagctgttacttcttccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccacca |
796 |
Q |
| |
|
|||| ||||| |||||||| |||||||||| ||||||| || ||||| || ||||| ||| | |||||||| || ||| | || |||| ||||||| |
|
|
| T |
5250412 |
gagcgcttactacttcccttatgccatggatctactggaagtaaaattattgttacaacacgtaacaaggaggtggc--atc-tatcatgaagtccacca |
5250316 |
T |
|
| Q |
797 |
agttatttgatttacaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttga |
896 |
Q |
| |
|
|| || ||||| | ||||| | | || | ||||||||| | ||||| | ||||||||| | || | | || ||||||||| ||||||||| |
|
|
| T |
5250315 |
aggagcttaatttagagaaattgaaggagagtgaatgttggagtatgtttgtgagacatgctttttacggaaggaatgcaagtgaatatccaaatcttga |
5250216 |
T |
|
| Q |
897 |
atcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattgg |
996 |
Q |
| |
|
||| ||||| | |||||| | ||||||||||||| |||| |||||| ||||| | ||||| | || ||||| | ||||||| ||||| ||||||| |
|
|
| T |
5250215 |
atctattggtaagaaaattataggcaagtgtggagggttgccattagctgtaaaaactttgggaaatctcttgcgaagaaagttttctcaacgtgattgg |
5250116 |
T |
|
| Q |
997 |
attcagatattggagactgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||| | || | |||||| ||||||||||||||||||| |
|
|
| T |
5250115 |
gttaagatattggagacagatatgtggcgtttatcagagggcgagagtaacattaattcagtactgagattgagtt |
5250040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 322 - 1031
Target Start/End: Original strand, 8568359 - 8569065
Alignment:
| Q |
322 |
gtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgttccaataatca |
421 |
Q |
| |
|
|||||||| || |||||||||||||||||| ||||||| | ||| |||| || | ||| ||| || ||||||| ||||||||||||| |||| | |
|
|
| T |
8568359 |
gtggatgaatcttgcatatatggtagagatgatgataaaaataaaataatcaattatttgcttttagacaatgatggtggcaaccatgtgagcgtaataa |
8568458 |
T |
|
| Q |
422 |
gcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaagcatgggtcta |
521 |
Q |
| |
|
| | || ||| |||| |||||||| || |||||||||||| |||| |||| ||| |||||||| | | || ||||| |||||||| |||||| | |
|
|
| T |
8568459 |
gtattgtgggtctaggtgggatgggtaagaccacccttgctcgacttgtctacaatgaccacaagatagagaagcaatttgaacttaaagcttgggtcca |
8568558 |
T |
|
| Q |
522 |
tgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatactacaacataaa |
621 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| |||||| || ||||||| |||| ||| | || ||||||||||| || ||| || | || |
|
|
| T |
8568559 |
tgtttcagaatcttttgatgttgttggactcaccaaaacaattctcaggtcatttcattcctcatctgacggtgaagacttggatccactcaaatgtcaa |
8568658 |
T |
|
| Q |
622 |
ctccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttcttccctttaacc |
721 |
Q |
| |
|
|| ||||| ||| ||| ||||| || | ||||||||| |||||||||||||||| ||| ||| |||| |||||||| |||||| ||||| ||||| | |
|
|
| T |
8568659 |
ctacaacagatattaacaggcaaaaagtttttgcttgttctagatgatatctggaatgggaatgaggaattttgggagcagttactacttccatttaatc |
8568758 |
T |
|
| Q |
722 |
atggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttacaacaattgga |
821 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||| ||||| ||| | || || || | ||| ||||||| || | || ||||| | |||||||| |
|
|
| T |
8568759 |
atggatcttcaggaagtaagattattgtgacaacacgtgacaagcatgttgc--atta-gtcatgaaatctgagcagcaacttcatttaaagcaattgga |
8568855 |
T |
|
| Q |
822 |
taaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaaaatagtgaac |
921 |
Q |
| |
|
| | ||||||||||||||||||| | |||||||||||||| || | || || |||||||| |||||||||||| ||||| | ||| || || | |
|
|
| T |
8568856 |
ggagaaagattgttggagtttatttgtgaaacatgcttttcaaggaaagaatgtgtttgaatatccaaatcttgaatcgattggaaagaagattgtagaa |
8568955 |
T |
|
| Q |
922 |
aagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggagactgatatgt |
1021 |
Q |
| |
|
|||||||||||| ||||||||||| | ||| ||||||| | || |||| | ||| ||| |||||| ||| ||| | | ||||||||||||||||||| |
|
|
| T |
8568956 |
aagtgtggagggttgcctttagctgtgaaaacattggggaatctcttgcaaagaaaattttctcaaggtgaatggtctaacatattggagactgatatgt |
8569055 |
T |
|
| Q |
1022 |
ggcgtttatc |
1031 |
Q |
| |
|
||| |||||| |
|
|
| T |
8569056 |
ggcatttatc |
8569065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 400 - 737
Target Start/End: Original strand, 4388426 - 4388763
Alignment:
| Q |
400 |
ggcaaccatgttccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcatt |
499 |
Q |
| |
|
|||||||| || |||||||||||| |||| ||| | || || ||||| || ||||| |||||| |||||| | |||| ||| || ||| ||||| |||| |
|
|
| T |
4388426 |
ggcaaccaagtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaatgaccgcaggatgaaagagcatt |
4388525 |
T |
|
| Q |
500 |
ttgatcttaaagcatgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaaga |
599 |
Q |
| |
|
|||| |||||||| |||||||| |||| ||| ||||||||||||||||||| || |||||||||| | ||||||| | |||||| || ||| |||||| |
|
|
| T |
4388526 |
ttgaacttaaagcttgggtctacgtttcagaaacttttgatgttgttggacttaccaaagcaattctgaggtcatttcactcttcaacacatgctgaaga |
4388625 |
T |
|
| Q |
600 |
cttaaatatactacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggag |
699 |
Q |
| |
|
|| ||| | || |||||| || | || |||| ||||| || |||||||| |||||||||||||||||| ||||||| ||| ||| ||| |||||||| |
|
|
| T |
4388626 |
gtttaatctgctccaacatcaattgcagcacaaactaactggtaagaaatatttgcttgttttagatgatgtctggaatgggaatgaggaaggttgggag |
4388725 |
T |
|
| Q |
700 |
ctgttacttcttccctttaaccatggatcttctggaag |
737 |
Q |
| |
|
| ||||| |||||| | |||||||||| ||||||| |
|
|
| T |
4388726 |
cgcttactacttcccctatgccatggatctactggaag |
4388763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 688 - 956
Target Start/End: Complemental strand, 5280933 - 5280668
Alignment:
| Q |
688 |
gaatgttgggagctgttacttcttccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttga |
787 |
Q |
| |
|
||||||||||| | |||||| ||||||||||| |||||||||| |||||| |||||||| || || || ||||| || |||||||||| || || ||| |
|
|
| T |
5280933 |
gaatgttgggaacagttactacttccctttaatcatggatcttttggaagtaagattattgtgaccacacgtgacaaagaggtagcag--ca-gtaatga |
5280837 |
T |
|
| Q |
788 |
aatccaccaagttatttgatttacaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatct |
887 |
Q |
| |
|
||||| || | || || |||| | |||||||| ||||| || |||||| ||||||||| | ||||||||||| || |||| || ||||||||| |
|
|
| T |
5280836 |
aatcctcccaaatagttcatttgaagcaattggaggaaagcgatggttggaatttatttgtgagacatgcttttcacggaaaaaatgcaagtgaatatcc |
5280737 |
T |
|
| Q |
888 |
aaatcttgaatcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcatt |
956 |
Q |
| |
|
|||||||||||||||||| | |||||| || |||||||||||||||| |||||||||| | |||||||| |
|
|
| T |
5280736 |
aaatcttgaatcaattgggaagaaaattgtaaacaagtgtggagggccgcctttagctctgaaatcatt |
5280668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 593 - 1034
Target Start/End: Original strand, 6591013 - 6591451
Alignment:
| Q |
593 |
gtgaagacttaaatatactacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatg |
692 |
Q |
| |
|
||||||||||| | ||||| |||| | || | ||||| ||| ||| |||||||||||||||||||||||||| ||||||| | ||| | || ||||| |
|
|
| T |
6591013 |
gtgaagacttagaaatactccaacgtcaattacaacagatagtaactggcaagaaatacttgcttgttttagacaatatctgtagcggaaaagcggaatg |
6591112 |
T |
|
| Q |
693 |
ttgggagctgttacttcttccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatcc |
792 |
Q |
| |
|
||||||| || |||| ||||| |||| |||||||||||||||||| ||||| ||||| ||||||| ||| ||||| ||||| |||| || || |||| |
|
|
| T |
6591113 |
ttgggagatgctactacttccgtttagccatggatcttctggaagtaagatgatggtgacaacgcatgacaaggaagtagc--atca-atcatgggatcc |
6591209 |
T |
|
| Q |
793 |
accaagttatttgatttacaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatc |
892 |
Q |
| |
|
||| || || |||||||| | |||||||| | || | | ||||||||||||||| | ||||||||| ||| | || || |||||||| || || |
|
|
| T |
6591210 |
acccagctagttgatttaaatcaattggaggagagtgactcttggagtttatttgtgagatatgcttttcgaggtagggatgtgtttgaatatccaactc |
6591309 |
T |
|
| Q |
893 |
ttgaatcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatga |
992 |
Q |
| |
|
||| || || |||| ||||||||| | |||||||| ||| | ||||||||| ||||| || |||| |||||||||| ||||| || || | || |
|
|
| T |
6591310 |
ttgtattgataggcaagaaaatagtagaaaagtgtggggggattcctttagctctaaaaacaatggggcaacttttgcaaaaaaaattctctgtaaccga |
6591409 |
T |
|
| Q |
993 |
ttggattcagatattggagactgatatgtggcgtttatcaga |
1034 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
6591410 |
atggatgaagatattggagactgatatgtggcatttatcaga |
6591451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 400 - 755
Target Start/End: Complemental strand, 5268596 - 5268241
Alignment:
| Q |
400 |
ggcaaccatgttccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcatt |
499 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||| | || || ||||| || |||||||||||| | || | | |||| ||| | | ||| || || ||| |
|
|
| T |
5268596 |
ggcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccacccttgctcaactcgtgtacaatgaccaaaggatcaaggagaatt |
5268497 |
T |
|
| Q |
500 |
ttgatcttaaagcatgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaaga |
599 |
Q |
| |
|
|| | | |||||| ||||||||||||| ||| |||||||| | | ||||| || |||||||||| | ||||||| | | |||||||||||||||||| |
|
|
| T |
5268496 |
ttaaacataaagcctgggtctatgtttcggaaatttttgatggtctcggacttactaaagcaattctgaggtcatttgacttttcagcagatggtgaaga |
5268397 |
T |
|
| Q |
600 |
cttaaatatactacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggag |
699 |
Q |
| |
|
||| ||| |||| |||||| | | || || ||||| |||||||||||||||||| |||| |||||| ||||||| ||| || ||||||||||||| |
|
|
| T |
5268396 |
cttgaatttactccaacatcagttgcagcagggactaacaggcaagaaatacttgctttttttggatgatgtctggaatgggagtgaagaatgttgggag |
5268297 |
T |
|
| Q |
700 |
ctgttacttcttccctttaaccatggatcttctggaagcaagattatggtaacaac |
755 |
Q |
| |
|
| ||| | |||||||| |||||||||| ||||||| || ||||| || ||||| |
|
|
| T |
5268296 |
cgcttattacttcccttattccatggatctgctggaagtaaaattattgtgacaac |
5268241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 878 - 1072
Target Start/End: Complemental strand, 5268121 - 5267927
Alignment:
| Q |
878 |
gtgaatatctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaa |
977 |
Q |
| |
|
||||||| | |||||||||||||||||| | ||||||||| | |||||||||||| | ||||||||| ||||| | ||||| | || ||||| | ||| |
|
|
| T |
5268121 |
gtgaatacccaaatcttgaatcaattggaaagaaaatagtagataagtgtggagggttacctttagctgtaaaaactttgggaaatctcttgcgaagaaa |
5268022 |
T |
|
| Q |
978 |
gtttactcaagatgattggattcagatattggagactgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
|| ||||| |||| ||| || ||||||||||||| |||||||||||||||||||| | ||| | |||||| ||||||||||||||||||| |
|
|
| T |
5268021 |
attctctcaacatgaatgggttaagatattggagacagatatgtggcgtttatcagaaggtgacattaacattaattcagtactgagattgagtt |
5267927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 573 - 977
Target Start/End: Complemental strand, 8471928 - 8471527
Alignment:
| Q |
573 |
atttaattcttcagcagatggtgaagacttaaatatactacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatc |
672 |
Q |
| |
|
|||| ||||||| ||| || |||||||||| ||||||| |||| |||| ||| | ||| ||||||||||||| || | |||||| | |||||| || |
|
|
| T |
8471928 |
atttgattcttctgcaaatagtgaagacttggatatactccaacggcaactgcaagaaatattaatgggcaagaactatctacttgttgtggatgatgtc |
8471829 |
T |
|
| Q |
673 |
tggaacggggatgcagaatgttgggagctgttacttcttccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtag |
772 |
Q |
| |
|
||||| | ||| ||| |||||||| |||||| |||||||||||||||||||||||| || |||||||| || ||||| || || || ||||||| |
|
|
| T |
8471828 |
tggaaactgaatgaggaaagttgggagaagttactacttccctttaaccatggatcttctacgagtaagattattgtgacaacacgcgacaaagaggtag |
8471729 |
T |
|
| Q |
773 |
cagatcatgtcttgaaatccaccaagttatttgatttacaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaag |
872 |
Q |
| |
|
|| ||| |||||| || |||||||||||||| |||||||||| || || | ||||||||||||||| | | |||||||| ||||||| |
|
|
| T |
8471728 |
cattaattgt---gaaatctacaaagttatttgatttgaaacaattggagaagagtgactgttggagtttattttccagtcttgcttttcctggcaaaaa |
8471632 |
T |
|
| Q |
873 |
tgagtgtgaatatctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcgg |
972 |
Q |
| |
|
| | ||||| | |||||||||||||||||||| || || || | |||||||||||||||||||||||| | ||| ||||||| | ||||||||| |
|
|
| T |
8471631 |
attgagcgaatacccaaatcttgaatcaattggcaaaaatattgtagataagtgtggagggctgcctttagctgtgaaaacattgggaaaccttttgcgg |
8471532 |
T |
|
| Q |
973 |
aaaaa |
977 |
Q |
| |
|
||||| |
|
|
| T |
8471531 |
aaaaa |
8471527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 8479979 - 8480045
Alignment:
| Q |
18 |
gaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttct |
84 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
8479979 |
gaagaattgacttgatgaacttaaacatgttgtttatgaagcaaaccaactattacatgagatttct |
8480045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 5281586 - 5281466
Alignment:
| Q |
5 |
aaagcatatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataa |
104 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||||||| ||| ||||| ||||||||| | || ||||||||| |||| || ||| || ||||| |
|
|
| T |
5281586 |
aaagcacatatgtaaagaagtggcttgatgatcttaaacatgctgtatatgaggcagaccaaattttcgatgagattgctactgacgcacaactgaataa |
5281487 |
T |
|
| Q |
105 |
tctgaaagctgaatctgaacc |
125 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
5281486 |
gctgaaagatgaatctgaacc |
5281466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 5299652 - 5299587
Alignment:
| Q |
16 |
gtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatt |
81 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||| ||||||||||| ||||| || ||||||||| |
|
|
| T |
5299652 |
gtgaagaagtggcttggtgatcttaaacatgttgtgtatgaagcagatcaacttttggatgagatt |
5299587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 878 - 1072
Target Start/End: Original strand, 4388907 - 4389101
Alignment:
| Q |
878 |
gtgaatatctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaa |
977 |
Q |
| |
|
|||| |||| |||||||| ||||||||||| |||||| || | ||||||| |||| | || |||||| ||||| | ||||| | || ||||| | ||| |
|
|
| T |
4388907 |
gtgagtatccaaatcttgtatcaattggcaagaaaattgtagataagtgtgtagggtttccattagctgtaaaaacgttgggaaatctcttgcgaagaaa |
4389006 |
T |
|
| Q |
978 |
gtttactcaagatgattggattcagatattggagactgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
|| ||||| ||| ||| || |||||||||||| |||||||||| ||||||||| | ||| | | |||||| ||||||||||||||||||| |
|
|
| T |
4389007 |
attctctcaacgtgaatgggttaggatattggagaccgatatgtggcatttatcagaaggtgacaataacattaattcagtactgagattgagtt |
4389101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 879 - 1041
Target Start/End: Complemental strand, 7750088 - 7749926
Alignment:
| Q |
879 |
tgaatatctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaag |
978 |
Q |
| |
|
|||||||| |||||| || || || |||| ||||||||| | |||||||| ||| ||||||||||| || || ||||||| ||| | |||| || || |
|
|
| T |
7750088 |
tgaatatccaaatctcgagtcgatcggcaagaaaatagtagaaaagtgtggggggttgcctttagctctagaaacattggggcaattattgcaaaacaaa |
7749989 |
T |
|
| Q |
979 |
tttactcaagatgattggattcagatattggagactgatatgtggcgtttatcagacagggac |
1041 |
Q |
| |
|
|| | || ||| |||||| | ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7749988 |
ttctgtgaaactgaatggattaaaatattggagactgatatgtggcgtttatcagacggggac |
7749926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 473 - 746
Target Start/End: Complemental strand, 7750494 - 7750218
Alignment:
| Q |
473 |
acaacgacaacaagataaaagatcattttgatcttaaagcatgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtc |
572 |
Q |
| |
|
|||||||| |||||||| | || || ||||| |||||||| ||||||||||||| |||||||||||| ||||| ||||| ||||||||| || | |
|
|
| T |
7750494 |
acaacgaccacaagatacatgagcaatttgaacttaaagcttgggtctatgtttcagaatcttttgatcttgttcatctcacccaagcaattctcaggga |
7750395 |
T |
|
| Q |
573 |
atttaattcttcag---cagatggtgaagacttaaatatactacaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgat |
669 |
Q |
| |
|
|||| ||||||||| | || |||||||| | | ||||| |||| | || | ||||| | |||| |||||||| ||||||||||||||||| || |
|
|
| T |
7750394 |
atttcattcttcagaaacgtatagtgaagacatggaaatactccaacgtcaattgcaacagagactagctggcaagaagtacttgcttgttttagacaat |
7750295 |
T |
|
| Q |
670 |
atctggaacggggatgcagaatgttgggagctgttacttcttccctttaaccatggatcttctggaagcaagattat |
746 |
Q |
| |
|
|||||||||| | ||| |||||| || || | |||| ||||| |||| | ||||||| |||||||| ||| |||| |
|
|
| T |
7750294 |
atctggaacgagaatgtggaatgtaggaagaagctactacttccatttagcaatggatcctctggaagtaagcttat |
7750218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 785 - 977
Target Start/End: Original strand, 6838772 - 6838964
Alignment:
| Q |
785 |
tgaaatccaccaagttatttgatttacaacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaata |
884 |
Q |
| |
|
||||||| || |||||||||||||| |||||||||| || || | |||||||||||||| || | ||||||||| ||||||| || | ||||| |
|
|
| T |
6838772 |
tgaaatctacaaagttatttgatttgaaacaattggagaagagtgacagttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaata |
6838871 |
T |
|
| Q |
885 |
tctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaa |
977 |
Q |
| |
|
| ||| |||||||||||||||| || || || | |||||||||||| ||||||||||| | ||| ||||||| | || ||||||||||| |
|
|
| T |
6838872 |
cccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaa |
6838964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 834 - 917
Target Start/End: Complemental strand, 6265825 - 6265742
Alignment:
| Q |
834 |
ttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaaaatagt |
917 |
Q |
| |
|
||||||||||||||| | |||||||||||||||| | || || |||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
6265825 |
ttggagtttatttgtgagatatgcttttcaaggcaagaatgtgtttgaatatccaaatcttgaattgattggcaagaaaatagt |
6265742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 5251101 - 5250981
Alignment:
| Q |
5 |
aaagcatatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataa |
104 |
Q |
| |
|
||||||| || |||||||||||||||||||| ||||||||| || ||||| | ||||| || |||||||||||| | || |||||| || || || |
|
|
| T |
5251101 |
aaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaa |
5251002 |
T |
|
| Q |
105 |
tctgaaagctgaatctgaacc |
125 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
5251001 |
gctgaaagctgaatctcaacc |
5250981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 439 - 546
Target Start/End: Complemental strand, 5281185 - 5281078
Alignment:
| Q |
439 |
gggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaagcatgggtctatgtttttgaatcttttg |
538 |
Q |
| |
|
|||||||| || |||||||||||| |||||| | | |||||| | | || ||||| |||||||| | |||||| ||||||||||||| |||| ||||| |
|
|
| T |
5281185 |
gggatgggtaagaccacccttgctgagcttgtgtataacgacgatagaattaaagagcattttgaacataaagcttgggtctatgtttcagaattttttg |
5281086 |
T |
|
| Q |
539 |
atgttgtt |
546 |
Q |
| |
|
||| |||| |
|
|
| T |
5281085 |
atgctgtt |
5281078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 999 - 1073
Target Start/End: Original strand, 6722154 - 6722228
Alignment:
| Q |
999 |
tcagatattggagactgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagttt |
1073 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||| | || ||| ||||||| | ||||| ||||||||||| |
|
|
| T |
6722154 |
tcagatattggagactgatttgtggtgtttatcagagggtgagaacaacattaaccccgtactaagattgagttt |
6722228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 834 - 959
Target Start/End: Complemental strand, 6169025 - 6168900
Alignment:
| Q |
834 |
ttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtggaggg |
933 |
Q |
| |
|
||||||||||||||| | ||||||||| |||||| | | || |||||||| |||||||||||| ||||| | ||||||||| | || ||||| ||| |
|
|
| T |
6169025 |
ttggagtttatttgtaagacatgcttttgaaggcaggaatatgtttgaatatccaaatcttgaatcgattggtatgaaaatagtagaaaaatgtgggggg |
6168926 |
T |
|
| Q |
934 |
ctgcctttagctataaaatcattggg |
959 |
Q |
| |
|
|||||| ||| ||||| ||||||| |
|
|
| T |
6168925 |
tcgccttttgctctaaaaacattggg |
6168900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 834 - 959
Target Start/End: Complemental strand, 6245421 - 6245296
Alignment:
| Q |
834 |
ttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtggaggg |
933 |
Q |
| |
|
||||||||||||||| | ||||||||| |||||| | | || |||||||| |||||||||||| ||||| | ||||||||| | || ||||| ||| |
|
|
| T |
6245421 |
ttggagtttatttgtaagacatgcttttgaaggcaggaatatgtttgaatatccaaatcttgaatcgattggtatgaaaatagtagaaaaatgtgggggg |
6245322 |
T |
|
| Q |
934 |
ctgcctttagctataaaatcattggg |
959 |
Q |
| |
|
|||||||||| | ||| ||||||| |
|
|
| T |
6245321 |
tcgcctttagctctgaaaacattggg |
6245296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 669; Significance: 0; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 669; E-Value: 0
Query Start/End: Original strand, 12 - 1072
Target Start/End: Original strand, 6578 - 7638
Alignment:
| Q |
12 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaactattagatgagatttctaccgatgcaatgctaaataatctgaaa |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| | ||| |
|
|
| T |
6578 |
atatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaggcagaccaactattagatgagatttctactgatgcaatgataaataagcaaaaa |
6677 |
T |
|
| Q |
112 |
gctgaatctgaaccacttaccaccaatttattgggcatggtttcagctttaactagaaatccatttgaatctaggctcaatgaacaactggataaactag |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6678 |
gctgaatctgaaccacttaccaccaatttattgggtttggtttcagctttaactacaaatccatttgaatgtaggctcaatgaacaactggataaactag |
6777 |
T |
|
| Q |
212 |
aacttcttgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtcagttggaaaccttcacaaaggttgtcatc |
311 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6778 |
aacttcttgcaaagcaaaagaaagatttgagattgggagaaggtcctagtgctagtaatgaaggcttagtcagttggaaaccttcaaaaaggttgtcatc |
6877 |
T |
|
| Q |
312 |
cacagctctcgtggatgagtcgagcatatatggtagagatgttgataaagaaaaactaataaagtttttacttgcaggcaatgatagtggcaaccatgtt |
411 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||| ||||||||||||| ||||||||| ||||||||||| ||| |
|
|
| T |
6878 |
tacagctctcgtggatgagtcaagcatatatggtagggatgttgataaggaaaaaataatcaagtttttacttgaaggcaatgacagtggcaaccaggtt |
6977 |
T |
|
| Q |
412 |
ccaataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaag |
511 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||| | |||||||| ||||||| |
|
|
| T |
6978 |
ccaataatcagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaaagacaacaagataaagaagcattttgaacttaaag |
7077 |
T |
|
| Q |
512 |
catgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagacttaaatatact |
611 |
Q |
| |
|
||||||||||||||| |||||||| |||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||| ||| |
|
|
| T |
7078 |
catgggtctatgtttcagaatctttcgatgtttttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaagacttgaatcaact |
7177 |
T |
|
| Q |
612 |
acaacataaactccaacacatactaatgggcaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttctt |
711 |
Q |
| |
|
|||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||| || ||||| |||||||| | |||| ||| |
|
|
| T |
7178 |
ccaacatcaactccaacacatgttaatgggaaagaaatacttgcttgttttagatgatatatggaatgggagtgtagaatattgggagcagctactactt |
7277 |
T |
|
| Q |
712 |
ccctttaaccatggatcttctggaagcaagattatggtaacaacgcgtgaaaaggaggtagcagatcatgtcttgaaatccaccaagttatttgatttac |
811 |
Q |
| |
|
|| ||||||||||||||||||||||| || ||||| || ||||| |||||||||||||||||| |||||| | ||||| ||||| ||||||||||||| |
|
|
| T |
7278 |
ccgtttaaccatggatcttctggaagtaaaattatcgtgacaacacgtgaaaaggaggtagcatgtcatgttctaaaatcaaccaaattatttgatttac |
7377 |
T |
|
| Q |
812 |
aacaattggataaaagcaattgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaa |
911 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| || |||||||||||||| ||||||| ||||||||||| |||||||||| ||||||| | ||| |
|
|
| T |
7378 |
aacaattggaaaaaagcaattgttggagattatttgtgacacatgcttttcaaggaaaaagtgtgtgtgaatatccaaatcttgaaacaattgggaagaa |
7477 |
T |
|
| Q |
912 |
aatagtgaacaagtgtggagggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggag |
1011 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||| |||||| |||| | ||| ||| || || |||| |||||| ||||||||||| |
|
|
| T |
7478 |
aatagtggacaagtgtggagggttgcctttagctataaaatcattggcacaacttctgcgtagaaaattttctgaacatgaatggattaagatattggag |
7577 |
T |
|
| Q |
1012 |
actgatatgtggcgtttatcagacagggaccacaccattaactcagtactgagattgagtt |
1072 |
Q |
| |
|
|| || |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7578 |
accgacatgtggcgtttatcagacggggatcacaccattaactcagtactgagattgagtt |
7638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 3e-17; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 41068423 - 41068482
Alignment:
| Q |
5 |
aaagcatatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagcagaccaa |
66 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41068423 |
aaagcatatatgtgaagaattggcttgatgaacttaaacatgttgtt--tgaagcagaccaa |
41068482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 41068553 - 41068617
Alignment:
| Q |
219 |
tgcaaagcaaaagaaaaagttgggattgggagaaggtccttgtgctaggaatgaaggcttagtca |
283 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
41068553 |
tgcaaagcaaaagaaagagttgggattgggagaaggtcctaacgctagtaatgaaggcttagtca |
41068617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 830 - 1024
Target Start/End: Original strand, 6573214 - 6573408
Alignment:
| Q |
830 |
attgttggagtttatttgttacgcatgcttttcaaggcaaaagtgagtgtgaatatctaaatcttgaatcaattggcaggaaaatagtgaacaagtgtgg |
929 |
Q |
| |
|
||||||||||||||||||| | |||||||||| ||| |||| || || ||| |||| |||||||||||| ||||||| | | || || |||| ||||| |
|
|
| T |
6573214 |
attgttggagtttatttgtgaaacatgcttttcgaggaaaaaatgtgtttgactatccaaatcttgaatcgattggcaaggagattgtagacaaatgtgg |
6573313 |
T |
|
| Q |
930 |
agggctgcctttagctataaaatcattgggccaacttttgcggaaaaagtttactcaagatgattggattcagatattggagactgatatgtggc |
1024 |
Q |
| |
|
|||| |||||||||| | ||| ||||||| | || |||| | ||| ||| |||| | ||| ||| || |||||||||| ||||||||||||| |
|
|
| T |
6573314 |
agggttgcctttagccgtgaaaacattggggaatctcttgcaaagaaaattttctcagggtgaatggtttaagatattggaaactgatatgtggc |
6573408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 413 - 602
Target Start/End: Original strand, 6572800 - 6572989
Alignment:
| Q |
413 |
caataatcagcgtagtcggtttaggagggatggggaaaaccacccttgctaagcttgcgcacaacgacaacaagataaaagatcattttgatcttaaagc |
512 |
Q |
| |
|
||||||||||| |||| ||||| || ||||||||||| |||||||||||| |||||| |||| ||| | | ||| | | || ||||| |||||||| |
|
|
| T |
6572800 |
caataatcagcatagtgggtttgggtgggatggggaagaccacccttgctcagcttgtctacaatgaccagaggatggagaaacagtttgaccttaaagc |
6572899 |
T |
|
| Q |
513 |
atgggtctatgtttttgaatcttttgatgttgttggactcacgaaagcaattcacaagtcatttaattcttcagcagatggtgaagactt |
602 |
Q |
| |
|
|||||| |||| | |||| ||||||| |||||||||||| ||| |||||| | |||||| |||||| ||||| ||||||||||| |
|
|
| T |
6572900 |
ttgggtccatgtctcaaaatcatttgatgctgttggactcaccaaaacaattcttaggtcattccattcttttgcagacggtgaagactt |
6572989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 19936232 - 19936185
Alignment:
| Q |
37 |
cttaaacatgttgtttatgaagcagaccaactattagatgagatttct |
84 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
19936232 |
cttaaacatgttgtttatgaagcaaaccaactattacatgagatttct |
19936185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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