View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15096_high_8 (Length: 266)
Name: NF15096_high_8
Description: NF15096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15096_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 45783969 - 45783726
Alignment:
| Q |
1 |
ttgaggatattacttatcatattatatcacaacaagaaaaatcatggcaggaccagtatcaatgaggtgtcaagttgcattggttcttgtattggttgtg |
100 |
Q |
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| T |
45783969 |
ttgaggatattacttatcatattatatcacaa---gaaaaatcatggcaggaccagtatcaatgaggtgtcaagttgcattggttcttgtattggttgtg |
45783873 |
T |
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| Q |
101 |
gcattggggaccaaaatggaaatgggtgaggcacaaactacttgtccaactcagcttagcaatctgaatgtttgtgcaccatttgttgttcctggttcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45783872 |
gcattggggaccaaaatggaaatgggtgaggcacaaactacttgtccaactcagcttagcaatctgaatgtttgtgcaccatttgttgttcctggttcac |
45783773 |
T |
|
| Q |
201 |
ccaacactaacccaagtcctgattgctgcactgcacttcaatcaacc |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45783772 |
ccaacactaacccaagtcctgattgctgcactgcacttcaatcaacc |
45783726 |
T |
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