View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15097_high_4 (Length: 407)
Name: NF15097_high_4
Description: NF15097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15097_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 397
Target Start/End: Original strand, 4024204 - 4024601
Alignment:
| Q |
1 |
atgaacatgagagagaaaacaaagacaagaacgttcactatggctttgtgtgtgtaagttgagttgctttgtac--tccattcattcattcattgctaca |
98 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||| |
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| T |
4024204 |
atgaccatgagagagaaaacaaagacaagaacgttcactatggctttgtgtgtgtaagttgagttgctttgtaccattca-tcattcattcattgctaca |
4024302 |
T |
|
| Q |
99 |
agtttggtcatcatttcaagctatccattgccaatgacaaccaactcatgtgggctctactaacactttctttggttttggttatttttaaatttcaata |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
4024303 |
agtttggtcatcatttcaagctatccattgccaatgacaaccaactcatgtgggctctactaacactttcttttgttttggttatttttaaatttcaata |
4024402 |
T |
|
| Q |
199 |
gtacaaactattcaatgcacttcttcactcaatttaatttttcattattttcttccttcaataataatggtgtaatgaccctctccctctaaaaagtttt |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
4024403 |
gtacaaactattcaatgcacttcttcactcaatttaatttttcattattttcttccttcaacaataatggtgtaatgaccctctccctctaaaaagtttt |
4024502 |
T |
|
| Q |
299 |
atgacataactccctttcttcctcaacaaaatatagtaaaattaatcacttacactttatttagataattagttatttacacctttatcttgttcatct |
397 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
4024503 |
atgacataactccctttcttcctcaacaaaatatagtaaaattaatcacttacactttatttagataattagttatttacacatttatcttgttcatct |
4024601 |
T |
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