View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15097_low_14 (Length: 207)
Name: NF15097_low_14
Description: NF15097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15097_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 41830025 - 41830204
Alignment:
| Q |
14 |
caaaggtattgtaatgaaaccaccaagtataccaatcaaggttcatatataaattctgaaggtttgactaaaaaatgggaccccaattaggagaaattga |
113 |
Q |
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| T |
41830025 |
caaaggtattgtaatgaaaccaccaagtctaccaatcaaggttcatatataaattctgaaggtttgactaaaaaatgggaccccaattaggagaaattga |
41830124 |
T |
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| Q |
114 |
ggg-aaaaaatgatatagccgtaggaacacaaatattattggatcagaatgaaaaatcaagaaaataaaaaggaggaaac |
192 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41830125 |
gggaaaaaaatgatatagccgtaggaacacaaatattattggatcagaatgaaaaatcaagaaaataaaaaggaggaaac |
41830204 |
T |
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