View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1509R-Insertion-15 (Length: 320)
Name: NF1509R-Insertion-15
Description: NF1509R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1509R-Insertion-15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 7 - 320
Target Start/End: Complemental strand, 34885545 - 34885232
Alignment:
| Q |
7 |
caacatcgtcggcattaaacactactccggcaccatcaccggtcgcgaaatcctcggcttaatccgcgaacctttaaacccatacgattccaacgccatc |
106 |
Q |
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| T |
34885545 |
caacatcgtcggcattaaacactactccggcaccatcaccggtcgcgaaatcctcggcttaatccgcgaacctttaaacccatacgattccaacgccatc |
34885446 |
T |
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| Q |
107 |
aaagtcctcaacactcaaacgctccaagtcggttacatcgaacgctccgtcgcctccgctctcgctcctctcctcgacgctcacatcatccacgtcgaag |
206 |
Q |
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| T |
34885445 |
aaagtcctcaacactcaaacgctccaagtcggttacatcgaacgcgccgttgcctccgctctcgctcctctcctcgacgctcacatcatccacgtcgaag |
34885346 |
T |
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| Q |
207 |
ccatcgttcaaccccgctctaacaataacaaattccgtatcccttgtcagattcatatcttcgctcatcaatcttcttttgatgctgttcatgacgcttt |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34885345 |
ccatcgttcaaccccgctctaacaataacaaattccgtatcccttgtcagattcatatcttcgctcatcaatcttcttttgatgctgttcatgacgcttt |
34885246 |
T |
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| Q |
307 |
taacggttccaatg |
320 |
Q |
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|||||||||||||| |
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| T |
34885245 |
taacggttccaatg |
34885232 |
T |
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