View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1509R-Insertion-20 (Length: 188)
Name: NF1509R-Insertion-20
Description: NF1509R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1509R-Insertion-20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 27297853 - 27298032
Alignment:
| Q |
9 |
ccaagtttctctaattgtgcctcaaatatctttgattgagggctttatgttttcctggttctgaagagagacttgcataaacaattttaatgtatcctca |
108 |
Q |
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| T |
27297853 |
ccaagtttctctaattgtgcctcaaatatctttgattgagggctttatgttttcctggttctgaagagagacttgcataaacaattttaatgtatcctca |
27297952 |
T |
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| Q |
109 |
agtgtttgtgttctaggttcttgaggattttgtcaatactgttggtaaggatattgaggcttctgaaaattagggttacc |
188 |
Q |
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| T |
27297953 |
agtgtttgtgttctaggttcttgaggattttgtcaatactgttgctaaggatattgaggcttctgaaaattagggttacc |
27298032 |
T |
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