View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1509_high_25 (Length: 250)
Name: NF1509_high_25
Description: NF1509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1509_high_25 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 35485066 - 35485307
Alignment:
| Q |
10 |
aagaatatttcaaaaatcaaactgaacaatttttctctgttcaattgattctctgaggaagataaatataaatagagctgcttgagctataaggttttca |
109 |
Q |
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| T |
35485066 |
aagaatatttcaaaaatcaaactgaacaatttttctctgttcaattgattctctgaggaagataaatataaatagagctgcttgagctataaggttttca |
35485165 |
T |
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| Q |
110 |
ctaccttgcatagaaacaccactaactaaccctaaacttatctcaaaaagaattattgagcttgttagaacaataagtgaatagttgatatttttagggg |
209 |
Q |
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| T |
35485166 |
ctaccttgcatagaaacaccactaactaaccctaaacttatctcaaaaagaattattgagcttgttagaacaataagtgaatagttgatatttttagggg |
35485265 |
T |
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| Q |
210 |
aataaacagttgaattgtt-agtgtgaaccacaatcatctgt |
250 |
Q |
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||||||||||||||||||| |||||||||||||||||||||| |
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| T |
35485266 |
aataaacagttgaattgttaagtgtgaaccacaatcatctgt |
35485307 |
T |
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