View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1509_low_18 (Length: 323)

Name: NF1509_low_18
Description: NF1509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1509_low_18
NF1509_low_18
[»] chr8 (55 HSPs)
chr8 (19-174)||(43732778-43732931)
chr8 (22-173)||(16024246-16024394)
chr8 (19-174)||(12022142-12022296)
chr8 (19-164)||(8815141-8815284)
chr8 (18-172)||(30365223-30365375)
chr8 (19-173)||(34196402-34196551)
chr8 (76-174)||(8671849-8671947)
chr8 (19-174)||(40632996-40633142)
chr8 (54-174)||(9933332-9933450)
chr8 (18-153)||(29937614-29937747)
chr8 (74-174)||(20472747-20472845)
chr8 (49-171)||(39449398-39449518)
chr8 (91-174)||(6453275-6453356)
chr8 (95-174)||(43826423-43826500)
chr8 (19-172)||(31738516-31738667)
chr8 (18-174)||(41103503-41103659)
chr8 (19-91)||(31543244-31543316)
chr8 (19-92)||(3726863-3726936)
chr8 (81-172)||(9434360-9434450)
chr8 (19-88)||(9718654-9718723)
chr8 (201-254)||(43732676-43732729)
chr8 (19-90)||(7503127-7503198)
chr8 (201-255)||(12022337-12022391)
chr8 (18-107)||(31543071-31543160)
chr8 (19-86)||(2248452-2248519)
chr8 (212-251)||(4247725-4247764)
chr8 (19-114)||(11785676-11785770)
chr8 (18-109)||(12022297-12022388)
chr8 (207-253)||(8815341-8815387)
chr8 (207-253)||(31543070-31543116)
chr8 (16-86)||(36309020-36309090)
chr8 (105-174)||(38198135-38198202)
chr8 (22-59)||(2412967-2413004)
chr8 (22-107)||(16653105-16653190)
chr8 (112-168)||(22591501-22591555)
chr8 (18-86)||(7394638-7394706)
chr8 (18-54)||(9718488-9718524)
chr8 (18-173)||(24243049-24243199)
chr8 (207-251)||(31543272-31543316)
chr8 (18-109)||(40990180-40990272)
chr8 (207-251)||(43732887-43732931)
chr8 (208-251)||(2248452-2248495)
chr8 (209-252)||(7394663-7394706)
chr8 (18-101)||(34634305-34634388)
chr8 (25-91)||(1281149-1281215)
chr8 (18-108)||(8815296-8815386)
chr8 (209-251)||(9718681-9718723)
chr8 (211-253)||(9933238-9933280)
chr8 (32-114)||(11033567-11033649)
chr8 (207-253)||(41103502-41103548)
chr8 (18-91)||(1027020-1027093)
chr8 (208-249)||(16024155-16024196)
chr8 (133-174)||(26167847-26167888)
chr8 (19-59)||(2481977-2482017)
chr8 (133-173)||(27483652-27483692)
[»] chr5 (71 HSPs)
chr5 (19-174)||(33744193-33744346)
chr5 (19-174)||(34980901-34981054)
chr5 (22-174)||(21581038-21581188)
chr5 (19-174)||(40305670-40305818)
chr5 (19-174)||(10204667-10204820)
chr5 (18-173)||(12035935-12036087)
chr5 (19-174)||(15986624-15986777)
chr5 (74-174)||(10043343-10043441)
chr5 (64-151)||(6597835-6597920)
chr5 (89-174)||(8551488-8551571)
chr5 (21-108)||(1657968-1658055)
chr5 (19-174)||(10043010-10043162)
chr5 (74-173)||(6382419-6382516)
chr5 (18-113)||(14245087-14245182)
chr5 (19-133)||(2183944-2184058)
chr5 (18-84)||(13634710-13634776)
chr5 (206-256)||(14245083-14245133)
chr5 (19-92)||(14245217-14245290)
chr5 (19-91)||(16938479-16938551)
chr5 (19-174)||(28279476-28279629)
chr5 (21-108)||(7544291-7544378)
chr5 (18-97)||(11436938-11437017)
chr5 (207-254)||(13634708-13634755)
chr5 (207-257)||(14245246-14245296)
chr5 (18-83)||(10476025-10476090)
chr5 (18-91)||(26414892-26414965)
chr5 (20-108)||(13634866-13634954)
chr5 (207-251)||(16938479-16938523)
chr5 (207-255)||(26414889-26414937)
chr5 (202-254)||(40305860-40305912)
chr5 (23-82)||(2550533-2550592)
chr5 (104-174)||(5688504-5688572)
chr5 (206-257)||(5688589-5688640)
chr5 (207-254)||(7544133-7544180)
chr5 (207-250)||(13634911-13634954)
chr5 (206-249)||(42681450-42681493)
chr5 (19-61)||(10476230-10476272)
chr5 (22-92)||(11757074-11757144)
chr5 (18-108)||(16938634-16938724)
chr5 (211-253)||(20147074-20147116)
chr5 (211-249)||(34980812-34980850)
chr5 (18-91)||(7544135-7544208)
chr5 (201-254)||(10204573-10204626)
chr5 (207-248)||(11757103-11757144)
chr5 (204-253)||(12035934-12035983)
chr5 (204-257)||(15986618-15986671)
chr5 (201-254)||(15986818-15986871)
chr5 (214-255)||(40815293-40815334)
chr5 (207-255)||(1658013-1658061)
chr5 (207-247)||(2550552-2550592)
chr5 (201-249)||(8551612-8551660)
chr5 (201-253)||(10043250-10043302)
chr5 (213-253)||(13298269-13298309)
chr5 (74-156)||(13839783-13839863)
chr5 (208-251)||(10476229-10476272)
chr5 (19-54)||(22023568-22023603)
chr5 (204-251)||(34981007-34981054)
chr5 (19-107)||(35176815-35176905)
chr5 (207-253)||(11436937-11436983)
chr5 (24-102)||(36363193-36363271)
chr5 (18-59)||(20147074-20147115)
chr5 (201-254)||(33744387-33744440)
chr5 (18-114)||(8502834-8502929)
chr5 (18-54)||(10072656-10072692)
chr5 (18-58)||(10204575-10204615)
chr5 (208-248)||(12600703-12600743)
chr5 (19-59)||(20409665-20409705)
chr5 (54-114)||(29002241-29002301)
chr5 (19-83)||(37551585-37551649)
chr5 (19-83)||(37654415-37654479)
chr5 (211-251)||(40305670-40305710)
[»] chr7 (77 HSPs)
chr7 (19-173)||(33519140-33519292)
chr7 (19-164)||(36267553-36267696)
chr7 (19-174)||(48881558-48881711)
chr7 (18-173)||(28074102-28074255)
chr7 (25-174)||(37620865-37621012)
chr7 (35-174)||(35422055-35422192)
chr7 (18-173)||(48015299-48015452)
chr7 (75-174)||(39646560-39646657)
chr7 (40-173)||(37925933-37926064)
chr7 (90-174)||(21857438-21857520)
chr7 (45-174)||(2087765-2087896)
chr7 (93-174)||(3215934-3216013)
chr7 (44-162)||(31364070-31364183)
chr7 (18-156)||(30592252-30592388)
chr7 (74-174)||(3143571-3143673)
chr7 (201-254)||(28074100-28074153)
chr7 (18-91)||(39856037-39856110)
chr7 (19-174)||(41496957-41497110)
chr7 (76-174)||(48013593-48013690)
chr7 (111-173)||(12670928-12670988)
chr7 (19-174)||(16833786-16833942)
chr7 (207-256)||(37925836-37925885)
chr7 (18-86)||(1051675-1051743)
chr7 (18-86)||(4833530-4833598)
chr7 (19-174)||(40196532-40196685)
chr7 (18-113)||(33519047-33519142)
chr7 (18-109)||(37925840-37925931)
chr7 (84-174)||(8122235-8122327)
chr7 (20-114)||(31571619-31571713)
chr7 (207-253)||(39856065-39856111)
chr7 (18-100)||(47391019-47391101)
chr7 (206-255)||(1051697-1051746)
chr7 (206-251)||(25887192-25887237)
chr7 (202-251)||(36267748-36267797)
chr7 (19-88)||(47390855-47390924)
chr7 (208-253)||(47391057-47391102)
chr7 (18-86)||(18231763-18231831)
chr7 (22-89)||(33655282-33655349)
chr7 (19-86)||(36267730-36267797)
chr7 (206-256)||(34228518-34228568)
chr7 (201-251)||(39646469-39646519)
chr7 (22-108)||(42306485-42306571)
chr7 (206-251)||(13770948-13770993)
chr7 (206-255)||(18231785-18231834)
chr7 (86-153)||(7791831-7791896)
chr7 (18-86)||(13425119-13425187)
chr7 (18-54)||(17853069-17853105)
chr7 (207-251)||(33519248-33519292)
chr7 (207-251)||(36267553-36267597)
chr7 (18-109)||(13771100-13771191)
chr7 (202-249)||(37926036-37926083)
chr7 (207-253)||(4833529-4833575)
chr7 (18-108)||(10315788-10315878)
chr7 (19-101)||(13770948-13771030)
chr7 (208-250)||(31571671-31571713)
chr7 (207-257)||(40282191-40282241)
chr7 (19-85)||(40282197-40282263)
chr7 (209-251)||(41496957-41496999)
chr7 (209-251)||(48881558-48881600)
chr7 (212-253)||(13771151-13771192)
chr7 (133-174)||(18063673-18063714)
chr7 (132-173)||(20393693-20393734)
chr7 (204-249)||(23116425-23116470)
chr7 (19-84)||(25887192-25887257)
chr7 (201-254)||(33519045-33519098)
chr7 (133-174)||(33655220-33655261)
chr7 (208-249)||(37620776-37620817)
chr7 (208-245)||(41008188-41008225)
chr7 (54-174)||(48093984-48094102)
chr7 (216-253)||(48881758-48881795)
chr7 (213-253)||(10315839-10315879)
chr7 (205-249)||(18127433-18127476)
chr7 (207-251)||(28074308-28074352)
chr7 (212-248)||(31364249-31364285)
chr7 (219-255)||(37417835-37417871)
chr7 (21-109)||(37620776-37620864)
chr7 (207-251)||(47390855-47390899)
[»] chr3 (65 HSPs)
chr3 (18-174)||(34641083-34641235)
chr3 (21-174)||(26135888-26136039)
chr3 (201-312)||(42771985-42772094)
chr3 (19-174)||(42772123-42772266)
chr3 (19-174)||(24253813-24253966)
chr3 (54-174)||(40858656-40858774)
chr3 (25-174)||(10943620-10943767)
chr3 (22-174)||(17474209-17474359)
chr3 (18-174)||(8432260-8432412)
chr3 (69-174)||(41414169-41414272)
chr3 (21-174)||(44412452-44412603)
chr3 (23-152)||(55428492-55428619)
chr3 (54-174)||(48683703-48683823)
chr3 (74-173)||(18086035-18086133)
chr3 (76-174)||(42699669-42699765)
chr3 (77-174)||(21090129-21090224)
chr3 (76-159)||(54985750-54985838)
chr3 (77-174)||(36727268-36727362)
chr3 (96-174)||(46978518-46978594)
chr3 (19-174)||(18654600-18654753)
chr3 (18-91)||(24560216-24560289)
chr3 (111-174)||(16884064-16884124)
chr3 (21-101)||(41110323-41110403)
chr3 (202-255)||(44412357-44412410)
chr3 (207-255)||(24560213-24560261)
chr3 (19-174)||(24560308-24560461)
chr3 (19-91)||(28582681-28582753)
chr3 (257-305)||(42770051-42770099)
chr3 (201-249)||(44412555-44412603)
chr3 (207-254)||(5903546-5903593)
chr3 (104-174)||(27197734-27197802)
chr3 (201-256)||(27197843-27197898)
chr3 (207-254)||(34641190-34641237)
chr3 (94-156)||(45663220-45663279)
chr3 (22-80)||(18654784-18654842)
chr3 (214-256)||(21773777-21773819)
chr3 (207-253)||(25655172-25655218)
chr3 (210-255)||(24253717-24253762)
chr3 (23-169)||(37807176-37807321)
chr3 (18-91)||(41110493-41110566)
chr3 (19-91)||(220569-220641)
chr3 (22-86)||(28581189-28581253)
chr3 (211-247)||(31664391-31664427)
chr3 (211-247)||(31931969-31932005)
chr3 (19-79)||(36568904-36568964)
chr3 (18-54)||(37102158-37102194)
chr3 (201-248)||(21090265-21090312)
chr3 (19-54)||(30200098-30200133)
chr3 (18-61)||(44412360-44412403)
chr3 (20-54)||(40858764-40858798)
chr3 (209-247)||(55428581-55428619)
chr3 (12-53)||(220401-220442)
chr3 (212-253)||(6803406-6803447)
chr3 (204-253)||(8432259-8432308)
chr3 (211-256)||(9312471-9312516)
chr3 (18-59)||(9312673-9312714)
chr3 (208-253)||(17474407-17474452)
chr3 (208-253)||(18654802-18654847)
chr3 (34-91)||(30200263-30200320)
chr3 (133-174)||(54996792-54996833)
chr3 (19-59)||(651929-651969)
chr3 (207-251)||(28582709-28582753)
chr3 (213-253)||(41110527-41110567)
chr3 (201-253)||(41414076-41414128)
chr3 (134-174)||(46204977-46205017)
[»] chr2 (59 HSPs)
chr2 (19-174)||(45257398-45257551)
chr2 (18-173)||(42813712-42813865)
chr2 (25-174)||(31061450-31061598)
chr2 (75-174)||(15085756-15085853)
chr2 (75-174)||(33265697-33265794)
chr2 (36-173)||(1052771-1052907)
chr2 (19-132)||(22356134-22356248)
chr2 (77-174)||(45098260-45098355)
chr2 (81-174)||(34187666-34187759)
chr2 (76-174)||(35325360-35325456)
chr2 (96-173)||(31928121-31928196)
chr2 (74-162)||(3094408-3094494)
chr2 (32-169)||(9313079-9313219)
chr2 (23-174)||(2380996-2381140)
chr2 (74-163)||(8554354-8554441)
chr2 (74-174)||(21502124-21502222)
chr2 (22-174)||(31795772-31795922)
chr2 (74-174)||(42296358-42296456)
chr2 (77-164)||(36052145-36052230)
chr2 (19-131)||(16713657-16713769)
chr2 (202-251)||(8554446-8554495)
chr2 (18-174)||(23748186-23748340)
chr2 (18-86)||(15224871-15224939)
chr2 (20-108)||(36046205-36046293)
chr2 (18-109)||(41778772-41778863)
chr2 (19-84)||(35736175-35736240)
chr2 (207-251)||(17379846-17379890)
chr2 (201-253)||(31061357-31061409)
chr2 (207-251)||(35736175-35736219)
chr2 (19-91)||(36347713-36347785)
chr2 (21-108)||(8426881-8426968)
chr2 (18-92)||(17380012-17380086)
chr2 (207-253)||(23748295-23748341)
chr2 (201-255)||(35736381-35736435)
chr2 (207-249)||(36046401-36046443)
chr2 (207-256)||(9426980-9427029)
chr2 (21-82)||(35531837-35531898)
chr2 (19-67)||(17379846-17379894)
chr2 (209-253)||(17380043-17380087)
chr2 (207-251)||(22356204-22356248)
chr2 (211-251)||(31795968-31796008)
chr2 (207-255)||(41778769-41778817)
chr2 (201-253)||(45257305-45257357)
chr2 (18-147)||(17331414-17331535)
chr2 (18-61)||(35736389-35736432)
chr2 (208-251)||(36347742-36347785)
chr2 (216-251)||(39732937-39732972)
chr2 (201-255)||(3094547-3094601)
chr2 (18-92)||(9631731-9631805)
chr2 (209-255)||(15224896-15224942)
chr2 (201-251)||(17334006-17334056)
chr2 (204-254)||(31795766-31795816)
chr2 (20-54)||(39821868-39821902)
chr2 (18-91)||(2241590-2241663)
chr2 (21-114)||(40022522-40022615)
chr2 (133-174)||(41778864-41778905)
chr2 (202-257)||(2380986-2381042)
chr2 (209-249)||(16713494-16713534)
chr2 (207-251)||(42296503-42296547)
[»] chr6 (47 HSPs)
chr6 (22-174)||(26318396-26318546)
chr6 (18-174)||(3841176-3841331)
chr6 (19-173)||(9051534-9051686)
chr6 (18-174)||(4097234-4097388)
chr6 (64-161)||(31799025-31799120)
chr6 (82-173)||(15353456-15353544)
chr6 (35-161)||(34176587-34176711)
chr6 (65-174)||(25468445-25468552)
chr6 (82-174)||(15323316-15323406)
chr6 (18-159)||(10293354-10293492)
chr6 (88-161)||(15373668-15373739)
chr6 (18-98)||(10818228-10818308)
chr6 (20-174)||(16737997-16738149)
chr6 (18-91)||(14515472-14515545)
chr6 (201-253)||(23090993-23091045)
chr6 (207-253)||(9721136-9721182)
chr6 (18-92)||(9721137-9721211)
chr6 (20-156)||(10818325-10818459)
chr6 (207-256)||(14515468-14515517)
chr6 (19-112)||(14515623-14515715)
chr6 (209-253)||(9051734-9051778)
chr6 (22-92)||(9719034-9719104)
chr6 (27-100)||(23091121-23091195)
chr6 (22-91)||(19278210-19278278)
chr6 (18-102)||(665840-665923)
chr6 (209-253)||(10818227-10818271)
chr6 (18-66)||(30487305-30487353)
chr6 (206-253)||(9719029-9719076)
chr6 (66-174)||(29692969-29693083)
chr6 (207-253)||(30487304-30487350)
chr6 (207-257)||(31849104-31849154)
chr6 (211-248)||(4097717-4097754)
chr6 (216-256)||(4097230-4097270)
chr6 (22-98)||(4097678-4097754)
chr6 (19-114)||(9298635-9298735)
chr6 (18-54)||(21606853-21606889)
chr6 (212-251)||(15323225-15323264)
chr6 (212-251)||(15353364-15353403)
chr6 (66-169)||(28477076-28477186)
chr6 (24-114)||(19278039-19278128)
chr6 (19-56)||(4097443-4097480)
chr6 (20-85)||(9719208-9719273)
chr6 (207-248)||(19278237-19278278)
chr6 (210-250)||(9719233-9719273)
chr6 (207-251)||(12811180-12811224)
chr6 (201-249)||(25468585-25468633)
chr6 (133-173)||(32926737-32926777)
[»] chr4 (85 HSPs)
chr4 (22-174)||(4437428-4437578)
chr4 (19-172)||(37761557-37761708)
chr4 (21-173)||(54576329-54576479)
chr4 (55-174)||(43961501-43961618)
chr4 (74-174)||(22186810-22186908)
chr4 (54-174)||(17182518-17182638)
chr4 (54-174)||(47846090-47846208)
chr4 (44-170)||(7977520-7977645)
chr4 (18-148)||(5825013-5825141)
chr4 (19-174)||(34995142-34995293)
chr4 (21-172)||(21694890-21695040)
chr4 (22-174)||(29993774-29993924)
chr4 (74-174)||(55080670-55080768)
chr4 (19-102)||(54935230-54935313)
chr4 (74-162)||(11089619-11089705)
chr4 (75-174)||(14539363-14539460)
chr4 (75-174)||(51329887-51329983)
chr4 (75-164)||(54001162-54001246)
chr4 (27-173)||(17938115-17938259)
chr4 (21-174)||(27735836-27735987)
chr4 (19-101)||(37711285-37711367)
chr4 (18-108)||(41174500-41174590)
chr4 (54-154)||(44145842-44145940)
chr4 (89-172)||(9030309-9030390)
chr4 (201-256)||(44145768-44145823)
chr4 (18-109)||(56135748-56135839)
chr4 (19-174)||(5730830-5730983)
chr4 (22-85)||(46007879-46007942)
chr4 (54-174)||(47433743-47433861)
chr4 (207-254)||(49735465-49735512)
chr4 (12-86)||(54935060-54935135)
chr4 (207-254)||(56135746-56135793)
chr4 (18-108)||(6938402-6938492)
chr4 (18-84)||(31348500-31348566)
chr4 (18-92)||(49735467-49735541)
chr4 (18-174)||(45741981-45742135)
chr4 (133-174)||(56135840-56135881)
chr4 (39-174)||(6891451-6891584)
chr4 (19-91)||(45132667-45132739)
chr4 (207-251)||(49735692-49735736)
chr4 (207-251)||(54320634-54320678)
chr4 (19-86)||(26166937-26167004)
chr4 (207-254)||(31348521-31348568)
chr4 (210-253)||(54935065-54935108)
chr4 (211-253)||(1968563-1968605)
chr4 (22-80)||(5731014-5731072)
chr4 (207-253)||(6938447-6938493)
chr4 (207-253)||(7977697-7977743)
chr4 (207-253)||(37711136-37711182)
chr4 (18-60)||(53260717-53260759)
chr4 (18-91)||(1968531-1968604)
chr4 (66-123)||(35543354-35543411)
chr4 (207-248)||(46007901-46007942)
chr4 (19-68)||(49735687-49735736)
chr4 (19-92)||(54320605-54320678)
chr4 (18-98)||(21695053-21695133)
chr4 (27-174)||(35248777-35248922)
chr4 (207-251)||(37711323-37711367)
chr4 (209-253)||(41174547-41174591)
chr4 (92-147)||(51075215-51075268)
chr4 (207-251)||(54935269-54935313)
chr4 (204-251)||(17182682-17182729)
chr4 (208-251)||(26166937-26166980)
chr4 (19-86)||(47433886-47433953)
chr4 (210-253)||(53260716-53260759)
chr4 (76-174)||(55510261-55510356)
chr4 (19-54)||(56135930-56135965)
chr4 (23-109)||(27735749-27735835)
chr4 (19-108)||(31348316-31348410)
chr4 (18-91)||(37711137-37711215)
chr4 (21-115)||(47846204-47846298)
chr4 (207-249)||(47846256-47846298)
chr4 (211-253)||(54320433-54320475)
chr4 (208-253)||(5731032-5731077)
chr4 (133-174)||(37711234-37711275)
chr4 (34-83)||(49735648-49735696)
chr4 (219-251)||(4437626-4437658)
chr4 (18-86)||(7977674-7977742)
chr4 (217-253)||(14539486-14539522)
chr4 (217-253)||(29798286-29798322)
chr4 (18-54)||(34111003-34111039)
chr4 (207-251)||(37761664-37761708)
chr4 (207-251)||(47433909-47433953)
chr4 (21-109)||(47846417-47846505)
chr4 (18-86)||(54320434-54320501)
[»] scaffold0012 (1 HSPs)
scaffold0012 (23-173)||(184698-184847)
[»] chr1 (63 HSPs)
chr1 (23-153)||(35512909-35513037)
chr1 (18-174)||(1085488-1085643)
chr1 (27-174)||(25268355-25268500)
chr1 (18-173)||(20607311-20607462)
chr1 (18-174)||(51303383-51303537)
chr1 (74-174)||(33643359-33643457)
chr1 (74-174)||(47071142-47071240)
chr1 (19-174)||(35927904-35928056)
chr1 (21-174)||(2506630-2506781)
chr1 (64-173)||(13386964-13387071)
chr1 (19-174)||(40709292-40709445)
chr1 (54-174)||(1344639-1344757)
chr1 (73-173)||(40287310-40287407)
chr1 (19-174)||(40094933-40095086)
chr1 (21-92)||(12234181-12234252)
chr1 (74-174)||(525156-525252)
chr1 (18-174)||(30010423-30010577)
chr1 (204-251)||(40709292-40709339)
chr1 (18-88)||(41498403-41498473)
chr1 (18-91)||(12234009-12234082)
chr1 (207-252)||(26324013-26324058)
chr1 (206-251)||(30010332-30010377)
chr1 (201-254)||(51303381-51303434)
chr1 (19-91)||(30010332-30010404)
chr1 (19-86)||(2858932-2858999)
chr1 (18-92)||(35349465-35349537)
chr1 (19-102)||(38509894-38509977)
chr1 (18-133)||(47261401-47261516)
chr1 (19-109)||(2470730-2470820)
chr1 (211-253)||(12234008-12234050)
chr1 (111-172)||(17622630-17622689)
chr1 (207-253)||(20607417-20607463)
chr1 (201-251)||(33643268-33643318)
chr1 (207-253)||(41498402-41498448)
chr1 (207-244)||(2859132-2859169)
chr1 (18-173)||(8529891-8530044)
chr1 (22-83)||(38510074-38510135)
chr1 (133-174)||(50079496-50079537)
chr1 (74-174)||(52707736-52707834)
chr1 (204-256)||(1085484-1085536)
chr1 (19-59)||(20607223-20607263)
chr1 (17-61)||(26324012-26324056)
chr1 (19-91)||(35349634-35349706)
chr1 (207-251)||(35349662-35349706)
chr1 (201-253)||(35927812-35927864)
chr1 (19-102)||(41498565-41498649)
chr1 (207-254)||(30010532-30010579)
chr1 (207-254)||(38510094-38510141)
chr1 (54-85)||(49832722-49832753)
chr1 (201-251)||(1085684-1085734)
chr1 (22-108)||(7444650-7444736)
chr1 (207-249)||(12234210-12234252)
chr1 (22-92)||(20576136-20576206)
chr1 (38-91)||(2859104-2859157)
chr1 (207-256)||(40094928-40094977)
chr1 (55-174)||(44210943-44211058)
chr1 (207-251)||(2858932-2858976)
chr1 (208-248)||(20576136-20576176)
chr1 (211-251)||(20607223-20607263)
chr1 (19-91)||(32951490-32951562)
chr1 (23-55)||(35512638-35512670)
chr1 (207-247)||(35512997-35513037)
chr1 (207-251)||(38509894-38509938)
[»] scaffold0007 (1 HSPs)
scaffold0007 (23-174)||(242307-242456)
[»] scaffold0240 (2 HSPs)
scaffold0240 (18-164)||(17641-17783)
scaffold0240 (210-256)||(17741-17787)
[»] scaffold0071 (1 HSPs)
scaffold0071 (74-173)||(52977-53074)
[»] scaffold0095 (1 HSPs)
scaffold0095 (49-171)||(8241-8361)
[»] scaffold0026 (5 HSPs)
scaffold0026 (74-173)||(1452-1549)
scaffold0026 (22-91)||(1175-1244)
scaffold0026 (18-107)||(1554-1643)
scaffold0026 (208-248)||(1175-1215)
scaffold0026 (201-253)||(1592-1644)
[»] scaffold0119 (1 HSPs)
scaffold0119 (74-174)||(37474-37572)
[»] scaffold0067 (3 HSPs)
scaffold0067 (19-154)||(39186-39320)
scaffold0067 (18-91)||(39362-39435)
scaffold0067 (207-253)||(39390-39436)
[»] scaffold0262 (1 HSPs)
scaffold0262 (18-102)||(16295-16379)
[»] scaffold1414 (1 HSPs)
scaffold1414 (92-164)||(402-473)
[»] scaffold0198 (2 HSPs)
scaffold0198 (22-107)||(3150-3235)
scaffold0198 (208-248)||(3150-3190)
[»] scaffold0096 (2 HSPs)
scaffold0096 (207-251)||(6584-6628)
scaffold0096 (19-86)||(6584-6651)
[»] scaffold0006 (1 HSPs)
scaffold0006 (111-174)||(81503-81564)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 43732931 - 43732778
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  43732931 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgattttttgaaaattga 43732832  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  43732831 attaacaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 43732778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 16024394 - 16024246
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    ||||||||| ||||||| |||||||||||| |||||||||  ||||| ||| |||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttcttttt-aaattacggacattataaaatgatttttagaaaattgaatt 16024296  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  16024295 aacaacatg--ataaatgatcatataatacttcaaaaacacttaatttattt 16024246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 12022142 - 12022296
Alignment:
Q  19 agggtgtgtttgaatggagggttt-aggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    |||||||||| | ||||||||||| || |||||| ||||||||| || ||| ||| ||||||||||||| | ||||||||||||||||||| ||||||||    
T  12022142 agggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacgaacattataaaatgatttttagaaaattg 12022241  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  12022242 aattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 12022296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 8815141 - 8815284
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| | |||| || |  ||| ||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  8815141 agggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggacattataaaatgatttttagaaaattga 8815240  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacactt 164  Q
    || |||||||||  ||||||||| ||||||||||||||||||||||    
T  8815241 atcaacaacatg--ataaatgattatataatacttcaaaaacactt 8815284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 30365375 - 30365223
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| ||||||| ||||| |||| | ||||||||| || ||  ||| |||||||||||||  |||||||| ||||||||||| ||||||||    
T  30365375 aagggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattacagacattatgaaatgatttttagaaaattg 30365276  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    |||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||    
T  30365275 aattaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatt 30365223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 34196551 - 34196402
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||| ||||| |||||||||||||||||||| ||| ||||| || ||| ||| |||||| ||||||  |||||||||||||||||||| |||||||||    
T  34196551 agggtgcgtttggatggagggtttaggaggggaaggg-ggggagggcttacttttcttttt-aaattacagacattataaaatgatttttagaaaattga 34196454  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||  | ||||| |||||||||||||||||||||||||| ||||||||    
T  34196453 attaacaaca--agataaacgatcatataatacttcaaaaacactt-atttattt 34196402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 8671849 - 8671947
Alignment:
Q  76 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||| |||| |||||||||    
T  8671849 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttcaaaaatacttaatttatttt 8671947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40632996 - 40633142
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| || ||| |||       ||||||| |||||||||||||| |||||| |||||||||    
T  40632996 agggtgtgtttgaatggagggtttaggaggggaagggagaggagggcttacttt-------taaattacggacattataaaataatttttagaaaattga 40633088  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||  |||||||||  ||||||| ||||||||||||| |||||||||    
T  40633089 attaacaacatg--ataaatgattgtataatatttcaaaaacacttaatttatttt 40633142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 9933450 - 9933332
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 153  Q
    |||||||| |||||| ||| |||||||||| | |||||||||||||||||||||   ||||||||||||||||||||  |||||||||||||||||| ||    
T  9933450 ggaggggagggtttacttttcttttttaaaatttggacattataaaatgattttaaaaaaattgaattaacaacatg--ataaatgatcatataatattt 9933353  T
Q  154 caaaaacacttcatttatttt 174  Q
    |||||| |||| |||||||||    
T  9933352 caaaaatacttaatttatttt 9933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 29937747 - 29937614
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    |||| |||||||| |||||||||||| ||| |||||| |||| |     || ||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  29937747 aaggatgtgtttggatggagggtttaagagtggagggaagggaagaacatacttttctttttaaaattatggacattataaaatgatttttagaaaattg 29937648  T
Q  118 aattaacaacatgatataaatgatcatataatactt 153  Q
    |||||||||||||  |||||||||||||||||||||    
T  29937647 aattaacaacatg--ataaatgatcatataatactt 29937614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 20472747 - 20472845
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||  ||||||||||||| | |||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||    
T  20472747 cttttttaaattacagacattataaaataaattttagaaaattgaattaacaatatgatat--atgatcatataatacttcaaaaacacttgatttattt 20472844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 39449518 - 39449398
Alignment:
Q  49 ggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataa 148  Q
    ||||||||||||| || |||  |||||||||||| |||  ||| ||||||||| ||||||  ||||||||||||||||||||  || |||||||||||||    
T  39449518 ggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaattaacaacatg--attaatgatcatataa 39449421  T
Q  149 tacttcaaaaacacttcatttat 171  Q
    ||||||||||||| || ||||||    
T  39449420 tacttcaaaaacagttaatttat 39449398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 6453356 - 6453275
Alignment:
Q  91 cattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||||| |||||||||||||| ||||||  |||| | ||||||||||||||||||||||||| || ||||||    
T  6453356 cattataaaatgatttttagaaaattgaattaataacatg--ataagtaatcatataatacttcaaaaacacttaatatatttt 6453275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 43826500 - 43826423
Alignment:
Q  95 ataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||| |||||| |||||||||||||||||||||  ||||||||||||| |||||||||||||||||| | |||||||    
T  43826500 ataaaataatttttagaaaattgaattaacaacatg--ataaatgatcataaaatacttcaaaaacacttaacttatttt 43826423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 31738667 - 31738516
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa-aattg 117  Q
    |||||||||||| |||||||||||||||||||| |  |||||| ||||||  || | ||||||||||| ||||| |||||||| |||||||||| | ||     
T  31738667 agggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaat-attttttgaagagtta 31738569  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    |  ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||    
T  31738568 acatattaacatg--ataaatgatcatataatacttcaattacacttaatttatt 31738516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 41103503 - 41103659
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttt-attttccttttt-taaattatggacattataaaatgattttttgaaaat 115  Q
    ||||||||||||| |||||||||||||||||||| | ||||||| ||||| |||||| |||||  |||||||||||| ||| ||| | ||||   |||||    
T  41103503 aagggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaat 41103602  T
Q  116 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    | ||  || ||||||  ||||| ||||||||||||||||||  |||||| |||||||||    
T  41103603 taaaacaataacatg--ataaacgatcatataatacttcaatcacacttaatttatttt 41103659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31543316 - 31543244
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||  || ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  31543316 agggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggac 31543244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3726863 - 3726936
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    |||||||||||| |||||||||||||||||||| ||||  ||| |||||||||| | ||||||||||| |||||    
T  3726863 agggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggaca 3726936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 9434360 - 9434450
Alignment:
Q  81 aaattatggacattataaaa-tgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    |||||| ||| ||||||||| | ||||||  |||||||||||||||||||||||  |||||| |||||||||||||||| ||||| |||||||    
T  9434360 aaattacggatattataaaaataatttttaaaaaattgaattaacaacatgata--aatgataatataatacttcaaaaccacttaatttatt 9434450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 9718723 - 9718654
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatg 88  Q
    |||||||||||| || |||||||||||||| || |||||||||| ||||| ||| |||||||||||||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatg 9718654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 43732729 - 43732676
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  43732729 gtgagtcctcctctcccttcccctcctaaaccctcaatccaaacacacccttag 43732676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 7503198 - 7503127
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatgga 90  Q
    |||||||||||| || |||| ||| |||||||||||||||||| |||||| ||| | |||||||||||||||    
T  7503198 agggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatgga 7503127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 12022337 - 12022391
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  12022337 gtgagccctcccctcctttcccctcctaaaccctcaatccaaacacacccttaga 12022391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 31543071 - 31543160
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 107  Q
    |||||| |||||| |||||||||||| ||||||| ||||||||| |||||| ||| | ||||||||||| ||| | ||| ||||| ||||    
T  31543071 aagggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgttttt 31543160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 2248452 - 2248519
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    |||||||||||| || ||| ||||||||||||| |||||||||  ||| | |||||||||||||||||    
T  2248452 agggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaatta 2248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 4247725 - 4247764
Alignment:
Q  212 cctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  4247725 cctcccttcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 11785770 - 11785676
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 114  Q
    |||||||||||| |||||||||||||||||| | | || |||| |||||  ||| | ||||||||||| ||||||||| |||| ||||||| ||||    
T  11785770 agggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaat-attttttaaaaa 11785676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 12022388 - 12022297
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    ||||||||||||| || |||||||||||||||||  |||||||| || | | |||  |||||||||||| ||||| | ||||||| ||||||    
T  12022388 aagggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgttttttt 12022297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 8815341 - 8815387
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  8815341 cctcccctccctccccctcctaaaccctcaatccaaacacaccctta 8815387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 31543116 - 31543070
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||    
T  31543116 cctcccctcccttcccctcttaaaccctccatccaaacataccctta 31543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 36309090 - 36309020
Alignment:
Q  16 tcaagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||| || |||||| |||||||||||||||||||| ||||||||| |||||| ||| | | |||||||||    
T  36309090 tcaagagtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaatta 36309020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 38198135 - 38198202
Alignment:
Q  105 tttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||||  |||||| ||| |||||    
T  38198135 tttttaaaaattgaaataacaacatgatat--atgatcatataatacttcaatcacacttaattcatttt 38198202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 2412967 - 2413004
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggg 59  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  2412967 gtgtgtttggatggagggtttaggaggggaggggaggg 2413004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 16653190 - 16653105
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 107  Q
    ||||||||| ||| | |||||| ||||||| |||||| || |||||| ||| | ||||||||||| ||||||||| ||||| ||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgttttt 16653105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 22591501 - 22591555
Alignment:
Q  112 aaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatt 168  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||| | |||||||||    
T  22591501 aaattgaatgaacaacatgata--aatgatcatataatacttcaatagcacttcatt 22591555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 7394706 - 7394638
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    |||| |||||||| || ||||||||||||||||| ||||||||| |||| | |||  ||||||||||||    
T  7394706 aaggatgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaatta 7394638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 9718488 - 9718524
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  9718488 aagggtgtgtttggatggagggtttaggaggggaggg 9718524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 24243049 - 24243199
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| |||||| ||||| ||||| |||| |||| | |  ||| ||| | |||| |||||| | ||| ||||||||| | |||| |||||||    
T  24243049 aagggtgtgtttggatggagagtttaagagggaagggaaggg-atgacttacttttcattttgaaattacg-acactataaaatg-tcttttaaaaattg 24243145  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    || ||| |||||||||  |||||||||||||||||||||  |||||| ||| ||||    
T  24243146 aaataataacatgata--aatgatcatataatacttcaatcacacttaattaattt 24243199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 31543272 - 31543316
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||    
T  31543272 cctcccctcccttcccctcctaaaccctcaatcgaaacacaccct 31543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 40990180 - 40990272
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttat-tttccttttttaaattatggacattataaaatgatttttt 109  Q
    ||||||||||||| ||||||||||| ||||  ||  |||||||| ||||||| |||| |||||||| |||| |||| ||| ||||| ||||||    
T  40990180 aagggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttt 40990272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 43732887 - 43732931
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  43732887 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 2248495 - 2248452
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||||||| |||||  ||||||||||||||||||    
T  2248495 ctcccctcccttcccctcctaaactctcaatccaaacacaccct 2248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 7394663 - 7394706
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccctt 252  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||    
T  7394663 tcccctcccttcccctcctaaaccctcaatccaaacacatcctt 7394706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 34634388 - 34634305
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 101  Q
    ||||||||||||| |||||| ||||||||||||| |||| | || |||| |||||   ||||||||||| ||||| ||| ||||    
T  34634388 aagggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaat 34634305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 1281149 - 1281215
Alignment:
Q  25 tgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||| || ||||||||||||||||| |||| | || |||||| ||| ||||||||||||| ||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggac 1281215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 8815386 - 8815296
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||||||| || ||||||||||||||||  ||||||||| |||| | |||   ||||||||||| | ||| | ||||||| |||||    
T  8815386 aagggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgtttttt 8815296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 9718681 - 9718723
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  9718681 tcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 9933280 - 9933238
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||| ||| |||| |||||||||||||||||||||||||||    
T  9933280 ccctcctttctcctcctaaaccttcaatccaaacacaccctta 9933238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 11033649 - 11033567
Alignment:
Q  32 atggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 114  Q
    ||||||||||||||||| || |||||| |||| |||| ||| |  |||||||||||| | ||||| ||||| |||||| ||||    
T  11033649 atggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaa 11033567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 41103548 - 41103502
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||| ||||||||| |||||| || |||||||||||||||||    
T  41103548 cctcccctctcttcccctcctaaaccctccatccaaacacaccctta 41103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1027093 - 1027020
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| ||  ||||||||||| |||| ||||||| | |||| | ||| ||||||||||||| ||||    
T  1027093 aagggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggac 1027020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 16024196 - 16024155
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||||||| || |||||| ||||||||||||||||    
T  16024196 ctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 26167888 - 26167847
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  26167888 ataaatgatcatataatacttcaataactctttatttatttt 26167847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 2482017 - 2481977
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggg 59  Q
    ||||| |||||| |||||||||||||||||||| |||||||    
T  2482017 agggtatgtttggatggagggtttaggaggggaagggaggg 2481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 27483692 - 27483652
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  27483692 ataaattatcatataatacttcaataacactttatttattt 27483652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 33744193 - 33744346
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||| ||| || || ||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33744193 agggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggacattataaaatgattttttgaaaattga 33744292  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||  ||||||||||||||| | |||||||||||||| |||||||||    
T  33744293 attaacaacatg--ataaatgatcatatatttcttcaaaaacacttaatttatttt 33744346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 34981054 - 34980901
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||| |  ||| ||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  34981054 agggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaattatggacattataaaatgatttatagaaaattga 34980955  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
     |||||||||||  ||||||||| |||||||||||||||||||||| |||||||||    
T  34980954 gttaacaacatg--ataaatgattatataatacttcaaaaacacttaatttatttt 34980901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 21581188 - 21581038
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    ||||||||| |||||||||||||||||||| ||||||||    |   ||||| ||||||||||||||||| |||| |||| |||||| ||||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaagggaggggtgactaacttttctttttttaaattatggacgttatgaaataatttttagaaaattgaatt 21581089  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||  ||||||| |||||| ||||||||||||||||| |||||||||    
T  21581088 aacaacatg--ataaatgttcatatgatacttcaaaaacacttaatttatttt 21581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40305670 - 40305818
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| |||||||      ||| ||| |||||||||||||  ||||||||||||| |||||| |||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggagggc-----ttagttttcttttttaaattacagacattataaaataatttttagaaaattga 40305764  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||| |||  ||||||||||||||| |||||||||||| ||| |||||||||    
T  40305765 attaacaatatg--ataaatgatcatatagtacttcaaaaacccttaatttatttt 40305818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 10204820 - 10204667
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |  ||| ||||||||||||| ||||||||| |  ||| ||| ||||||||| |||  ||||||| ||||||||||||  ||||||||    
T  10204820 agggtgtgtttggaaagagagtttaggaggggaagggaggggaggacttacttttcttttttaatttacagacattaaaaaatgatttttaaaaaattga 10204721  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||  |  |||||||||||||||||||||||||||||||| |||||||||    
T  10204720 attaacaac--gtaataaatgatcatataatacttcaaaaacacttaatttatttt 10204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 12035935 - 12036087
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| || || |||||||||||||| ||||| ||| |  || |||| ||||||||||||||| |||||||||||| ||| || ||||||||    
T  12035935 aagggtgtgtttggatagatggtttaggaggggaagggagaggaggacttgtttttcttttttaaattatgaacattataaaattattattagaaaattg 12036034  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||| ||||||||  |||||| |||||||||||||| |||||||||| ||||||||    
T  12036035 aatt-acaacatg--ataaattatcatataatacttaaaaaacacttaatttattt 12036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 15986624 - 15986777
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |  ||||||||||||||||| ||||||||| |  ||| ||| ||||||||| |||  ||||||||||||||| ||||  ||||||||    
T  15986624 agggtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttacagacattataaaatgacttttaaaaaattga 15986723  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||  |  ||||||||||||||||||| |||||||||| |||||||||    
T  15986724 attaacaacat--ttaaaatgatcatataatactttaaaaacacttaatttatttt 15986777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 10043441 - 10043343
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||| |||    
T  10043441 cttttttaaattacgaatattataaaatgatttttagaaaattgaattaacaacat--tataaataatcatataatacttcaaaaacacttaatttcttt 10043344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 151
Target Start/End: Original strand, 6597835 - 6597920
Alignment:
Q  64 gtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatac 151  Q
    ||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  6597835 gtttacttttcttttttaaattacggacattgtaaaatgattttttgaaaattgaaataacaacatg--ataaatgatcatataatac 6597920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 8551488 - 8551571
Alignment:
Q  89 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||||  |||||| ||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||    
T  8551488 gacattataaaatgatttttaaaaaattaaattaacaacat--tataaatgatcatataatactttaaaaacacttaatttatttt 8551571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 1658055 - 1657968
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||| ||| | ||||||||||| ||||| ||||||||| |||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgtttttt 1657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 10043010 - 10043162
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    ||||||||||||||| ||||||||||||||  |   ||||| | |  ||| ||| |||| |||||||||  |||||| | ||| |||| | |||||||||    
T  10043010 agggtgtgtttgaatcgagggtttaggaggaaaaatgaggg-atgacttacttttctttcttaaattataaacattaaagaattatttctagaaaattga 10043108  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||  |||||||||||||||||| |||||||||| ||| |||||    
T  10043109 attaacaacatgata--aatgatcatataatactttaaaaacacttaattaatttt 10043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 6382516 - 6382419
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||| ||| ||| ||||||||||||||  ||||| |||||||||||||||||||||  ||||||| |||| | |||||||||||| |||| ||||||||    
T  6382516 cttttctaatttacggacattataaaatactttttagaaaattgaattaacaacatg--ataaatgttcatgtgatacttcaaaaagacttaatttattt 6382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 14245087 - 14245182
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 113  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| | |||| ||| ||||||||||||| ||||| | | ||||| ||||| ||||    
T  14245087 aagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaa 14245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 2184058 - 2183944
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||| ||||||| |  ||  || || ||||||| | | ||||||||| ||||||||||||||| | |||  ||||||||    
T  2184058 agggtgtgtttggatggagggtttaagaggggaagatagaagagggcttatttttcctctttaaattacggacattataaaatgttatttaaaaaattga 2183959  T
Q  119 attaacaacatgata 133  Q
    | |||||||||||||    
T  2183958 aataacaacatgata 2183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 13634710 - 13634776
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 84  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  13634710 aagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 14245133 - 14245083
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14245133 tcctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 14245083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 14245290 - 14245217
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||||| |||| | ||||||||||| |||||    
T  14245290 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggaca 14245217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 16938479 - 16938551
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||||| |||| ||||||||| ||| ||||    
T  16938479 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggac 16938551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 28279476 - 28279629
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| ||||||||||| ||| ||||  || || |||  |||| ||| | ||||||||||||||||||||| ||||| |||||  ||| || |    
T  28279476 agggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaa 28279575  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
      ||  ||||||  ||||||||||||||||||||||||  ||||||  ||||||||    
T  28279576 catattaacatg--ataaatgatcatataatacttcaatcacacttagtttatttt 28279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 7544378 - 7544291
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    |||||||||| |||||||||||||||||||| || |||||| |||||  ||| | ||||||||||| ||||| ||| ||||| |||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgtttttt 7544291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 11436938 - 11437017
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattata 97  Q
    ||||| ||||||| || ||||||||||||||||| ||||| ||| || ||| ||||||||||||||||| ||||| ||||    
T  11436938 aagggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatata 11437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 13634755 - 13634708
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  13634755 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 13634708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 14245246 - 14245296
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 257  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  14245246 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagaga 14245296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 10476025 - 10476090
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 83  Q
    |||||||||||||||| ||||||||||||||||| |||| | || |||||| ||| ||||||||||    
T  10476025 aagggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 26414892 - 26414965
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || |||||||||||||| || ||||||||| |||||| ||| | ||||||||||| ||||    
T  26414892 aagggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggac 26414965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 13634954 - 13634866
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||||| || ||||||||||||||||| ||||||||| || ||| ||| | ||||||||||| | ||| ||| ||||| |||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgtttttt 13634866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 16938523 - 16938479
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  16938523 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 16938479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 26414937 - 26414889
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  26414937 cctcccctcccttctcctcctaaaccctcaatccaaacacacccttaga 26414889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 40305860 - 40305912
Alignment:
Q  202 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  40305860 tgagttctcccctcccttctcctcctaaaccctcaatccaaacacacccttag 40305912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  23 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaa 82  Q
    |||||||| || ||||||||||||||||| ||||||||| |||||| ||| |||||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 5688572 - 5688504
Alignment:
Q  104 ttttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||| |||||||||||||||||||||||  |  |||| |||||||||||||||||||||| || ||||||    
T  5688572 tttttagaaaattgaattaacaacatgattga--tgatgatataatacttcaaaaacacttaatctatttt 5688504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 5688589 - 5688640
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 257  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||| |||||    
T  5688589 tcctcccttcccttcccctcctaaaccctcaatccaaacacaccctaagaga 5688640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 7544180 - 7544133
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||    
T  7544180 cctcccctcccttcccttcctaaaccctcaatccaaacacacccttag 7544133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 13634911 - 13634954
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccc 250  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  13634911 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 42681493 - 42681450
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  42681493 tcctcccctcctttcccctcttaaaccctcaatccaaacacacc 42681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 10476272 - 10476230
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggagggga 61  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  10476272 agggtgtgtttggatggagggtttaggaggggaagggagggga 10476230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 11757144 - 11757074
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||| |||||||||||| ||||||| ||||||||| ||||||  || | ||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggaca 11757074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 16938724 - 16938634
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||||||| |||||||||||||||| |||  |||||||| ||||||  || | |||||||||||  |||| ||| ||||| |||||    
T  16938724 aagggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgtttttt 16938634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 20147074 - 20147116
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacaccctta 20147116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 34980850 - 34980812
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34980850 ccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 7544135 - 7544208
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || |||||||||||| |||| ||||||||| || | | ||| ||||||||||||| ||||    
T  7544135 aagggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggac 7544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 10204626 - 10204573
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||| |||| |||||||||||||| |||||| || ||||||||||||||||||    
T  10204626 gtgagccctcacctcccttcccctcctaaaccctcgatccaaacacacccttag 10204573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 11757103 - 11757144
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  11757103 cctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 12035983 - 12035934
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||| ||||||||||||| |||||| || |||||||||||||||||    
T  12035983 agtcctcctctcccttcccctcctaaaccatctatccaaacacaccctta 12035934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 15986671 - 15986618
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 257  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||||| |||||    
T  15986671 agtcctcccctcccttcccctcctaaaccctctttccaaacacaccctaagaga 15986618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 15986818 - 15986871
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||| ||||| || |||||||||| |||||| |||||||||||||||||||||    
T  15986818 gtgagccctcctcttccttcccctcctaaaccctcaatccaaacacacccttag 15986871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 40815334 - 40815293
Alignment:
Q  214 tcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  40815334 tcccttcccctcctaaatcttcaatccaaacacacccttaga 40815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 1658013 - 1658061
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||||||||||||||||| |||||| || ||||||||||||| |||||    
T  1658013 cctcccctcccttcccctcctaaaccctccatccaaacacacctttaga 1658061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 2550552 - 2550592
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacaca 247  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  2550552 cctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 8551612 - 8551660
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  8551612 gtgagaccccccctctcttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 10043302 - 10043250
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||| ||||||||||||||||| |||||| |||||| ||| |||||||||    
T  10043302 gtgagtcatcccctcccttcccctcataaaccatcaatctaaatacaccctta 10043250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 13298309 - 13298269
Alignment:
Q  213 ctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  13298309 ctcccctcccctcttaaacattcaatccaaacacaccctta 13298269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 13839783 - 13839863
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaa-ttgaattaacaacatgatataaatgatcatataatacttcaa 156  Q
    ||||||||||||||||||| ||||||||| | ||||||||| ||||| ||| ||||||||| | |  |||||||||||||||||    
T  13839783 cttttttaaattatggacactataaaatg-tattttgaaaagttgaaataataacatgatagaca--atcatataatacttcaa 13839863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 251
Target Start/End: Original strand, 10476229 - 10476272
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||||||| |||||| || |||||||||||||||    
T  10476229 ctcccctcccttcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 22023603 - 22023568
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    |||||||||||| |||||||||||||||||||||||    
T  22023603 agggtgtgtttggatggagggtttaggaggggaggg 22023568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 34981007 - 34981054
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||||||||||||| || ||  |||||||||||    
T  34981007 agtcctcccctcccttcccctcttaaaccctccattaaaacacaccct 34981054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 35176905 - 35176815
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaagg--tttattttccttttttaaattatggacattataaaatgatttt 107  Q
    ||||||||||||  || ||||||||| |||||||||| ||||   |  |||| ||| ||||||||||||||||||| ||||||||| ||||    
T  35176905 agggtgtgtttggttgtagggtttagaaggggagggggggggggagaatttacttttcttttttaaattatggacactataaaatgctttt 35176815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 11436983 - 11436937
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||| ||||||||||||| |||||| ||||||||||||| ||||||    
T  11436983 cctcctctcccttcccctcctaaaccctcaatccaaacacgccctta 11436937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 36363271 - 36363193
Alignment:
Q  24 gtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 102  Q
    ||||||| |||||||||||||||||||| |||||| ||  ||| | ||| | ||||||||||| ||| | |||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatg 36363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 20147115 - 20147074
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggg 59  Q
    ||||||||||||| || ||||||||||||||||| |||||||    
T  20147115 aagggtgtgtttggattgagggtttaggaggggaagggaggg 20147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 33744387 - 33744440
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||| ||||||||||||||  ||| |||||| |||||||||| ||||||||||    
T  33744387 gtgagccctcccctcccttcatctcctaaaccctcaatccaaatacacccttag 33744440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 8502834 - 8502929
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 114  Q
    ||||||||||||| ||||| |||||| || ||||  ||| |||| |||| | ||| | ||||||||||| ||||||||| |||| ||||||| ||||    
T  8502834 aagggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaat-attttttaaaaa 8502929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 10072656 - 10072692
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  10072656 aagggtgtgtttggatggagggtttaagaggggaggg 10072692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 10204575 - 10204615
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggagg 58  Q
    ||||||||||||| || ||||||||||||||||| ||||||    
T  10204575 aagggtgtgtttggatcgagggtttaggaggggaagggagg 10204615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 12600703 - 12600743
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||| ||||||||| |||||||| |||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacac 12600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 20409665 - 20409705
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggg 59  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  20409665 agggtatgtttggatggagggttttggaggggaggggaggg 20409705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 29002241 - 29002301
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 114  Q
    |||||||| |||||| ||| | ||||||||||||| ||| ||||||||| |||||| ||||    
T  29002241 ggaggggagggtttacttttcatttttaaattatgaacactataaaatgttttttttaaaa 29002301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 37551649 - 37551585
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 83  Q
    |||||||||||| |||||||||||| ||||| | ||||| ||| |||||| ||| | ||||||||    
T  37551649 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 37654479 - 37654415
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 83  Q
    |||||||||||| |||||||||||| ||||| | ||||| ||| |||||| ||| | ||||||||    
T  37654479 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 40305710 - 40305670
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||| |||||| || |||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 33519292 - 33519140
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||| |||||||||  |||||||||||||||||||| |||||||||    
T  33519292 agggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattga 33519193  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  33519192 attaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttattt 33519140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 36267553 - 36267696
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||||||||||||| ||| ||||||||||||||||| |||||||||    
T  36267553 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaatgatttttagaaaattga 36267652  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacactt 164  Q
    || ||||| |||  ||||||||||||||||||||||||||||||||    
T  36267653 atcaacaatatg--ataaatgatcatataatacttcaaaaacactt 36267696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 48881558 - 48881711
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||||||||||||| |||||||||||||| |||||  |||||||||    
T  48881558 agggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataattttcagaaaattga 48881657  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||  ||||||||| ||||||| ||||||||| |||| |||||||||    
T  48881658 attaacaacatg--ataaatgattatataatgcttcaaaaatacttaatttatttt 48881711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 28074102 - 28074255
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| || || |||||||||||||| |||||||||    | | ||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  28074102 aagggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatgatttttagaaaattg 28074201  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||    
T  28074202 aattaacaacctg--ataaatgatcatataatacttcaaaaacacttaatttattt 28074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 25 - 174
Target Start/End: Complemental strand, 37621012 - 37620865
Alignment:
Q  25 tgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaac 124  Q
    |||||| |||||||||||  || |||| ||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  37621012 tgtttggatggagggtttgagaagggaagggaggggagggtttgcttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatc 37620913  T
Q  125 aacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||  ||||| ||| ||||||||||||||||||| || |||||||||    
T  37620912 aacatg--ataaaagattatataatacttcaaaaacatttaatttatttt 37620865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 174
Target Start/End: Complemental strand, 35422192 - 35422055
Alignment:
Q  35 gagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatat 134  Q
    ||||||||||||||| |   ||| ||| |||||| ||| |||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||   ||    
T  35422192 gagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaacat--aat 35422095  T
Q  135 aaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||| ||||||| ||||||||||||||||| |||||||||    
T  35422094 aaataatcatatgatacttcaaaaacacttaatttatttt 35422055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 48015452 - 48015299
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    |||||| |||||| |||||||| ||||||||||| |||||  ||  | ||| ||| | |||||||||||  ||| ||||||||| |||||| ||||||||    
T  48015452 aagggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagactttataaaataatttttggaaaattg 48015353  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||  |||||||||||||||||  ||||||||||||| ||||||||    
T  48015352 aattaacaacatg--ataaatgatcatataatttttcaaaaacacttaatttattt 48015299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 39646657 - 39646560
Alignment:
Q  75 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  ||  ||||| ||||||||||||||||||| || |||||||||    
T  39646657 ttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatg--attgatgatgatataatacttcaaaaacagttaatttatttt 39646560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 37926064 - 37925933
Alignment:
Q  40 tttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatg 139  Q
    ||||||| |||| ||||||||| |  | ||||| ||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||  ||  |||    
T  37926064 tttaggaagggaagggaggggaggactcatttttcttttctaaattacggacattataaaatgatgtttagaaaattgaattaacaacatg--attgatg 37925967  T
Q  140 atcatataatacttcaaaaacacttcatttattt 173  Q
    || |||||||||||||||||||||| || |||||    
T  37925966 atgatataatacttcaaaaacacttaatctattt 37925933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 21857520 - 21857438
Alignment:
Q  90 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||| ||||||||||||| |||||||||    
T  21857520 acattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatacaatatttcaaaaacacttaatttatttt 21857438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 2087765 - 2087896
Alignment:
Q  45 gaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgat--ataaatgatc 142  Q
    ||||||| ||||| | |||  ||| ||| ||||||||||||| ||| |||||||||| ||||||  |||| |||||||||||||||||  |||| |||||    
T  2087765 gaggggaagggagagaaagacttacttttcttttttaaattacggatattataaaataatttttaaaaaaatgaattaacaacatgataaataattgatc 2087864  T
Q  143 atataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||| |  |||||||||    
T  2087865 atataatacttcaaaaacattaaatttatttt 2087896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 3215934 - 3216013
Alignment:
Q  93 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||||||||||||||||||||| ||| |||| |||||||||    
T  3215934 ttataaaatgatttttagaaaattgaattaacaatatg--ataaatgatcatataatacttcataaatacttgatttatttt 3216013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 31364070 - 31364183
Alignment:
Q  44 ggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatca 143  Q
    |||||||| |||||||||  | ||| ||| ||||| ||||||| ||||||||||||||||||||  ||||||||||| |||     || |||||||||||    
T  31364070 ggaggggaagggaggggagagcttacttttcttttctaaattacggacattataaaatgattttaagaaaattgaatcaac-----gacataaatgatca 31364164  T
Q  144 tataatacttcaaaaacac 162  Q
    |||||||||||||||||||    
T  31364165 tataatacttcaaaaacac 31364183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 30592252 - 30592388
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    |||||||| |||| ||||||| |||||||||| | |||| |||| || ||| ||| |||||||||||||  |||| |||||||||||||||  |||||||    
T  30592252 aagggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattg 30592351  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaa 156  Q
    || |||  | |||  |||||| |||||||||||||||||    
T  30592352 aaataatcatatg--ataaataatcatataatacttcaa 30592388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 3143673 - 3143571
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaac-aacatgat-ataaatgatcatataatacttcaaaaacacttcatttat 171  Q
    |||||||||||||  ||||||||||||| ||||||  |||||||||||||  ||||  || ||||||||||||||||||||||||||| |||| ||||||    
T  3143673 cttttttaaattaatgacattataaaataatttttaaaaaattgaattaattaacaaaatgataaatgatcatataatacttcaaaaaaacttaatttat 3143574  T
Q  172 ttt 174  Q
    |||    
T  3143573 ttt 3143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 28074153 - 28074100
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28074153 gtgagttctcccctcccttcccctcctaaaccttcaatccaaacacacccttag 28074100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 39856110 - 39856037
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||    
T  39856110 aagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 39856037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 41496957 - 41497110
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| ||||||||| | |||| |||   ||||||||||| ||||| ||  ||||| |||||| |||||| |    
T  41496957 agggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatg-ttttttaaaaattta 41497055  T
Q  119 a-ttaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |  ||  ||||||  ||||||||||||||||| ||||||  |||||| |||||||||    
T  41497056 acatattaacatg--ataaatgatcatataattcttcaatcacacttaatttatttt 41497110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 48013690 - 48013593
Alignment:
Q  76 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatat-aatacttcaaaaacacttcatttatttt 174  Q
    ||||||||| |  ||| ||||||||| |||||| |||||||||||||||||||||  |||||||||||||| |||  ||||||||||||| |||||||||    
T  48013690 tttttaaatcacagactttataaaataatttttagaaaattgaattaacaacatg--ataaatgatcatatgaatttttcaaaaacacttaatttatttt 48013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 12670928 - 12670988
Alignment:
Q  111 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||    
T  12670928 aaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaattcattt 12670988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 16833942 - 16833786
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatgga---cattataaaatgattttttgaaaat 115  Q
    |||||||||||| ||| ||| |||| ||||||| || ||| || |  ||| ||| |||||| ||||||  ||   |||||||| || ||||||  |||||    
T  16833942 agggtgtgtttggatgcaggatttaagaggggaaggaaggagaggagttacttttctttttaaaattacagacttcattataatataatttttataaaat 16833843  T
Q  116 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||| ||||||  |||||||||||| ||||||||||||||||||| |||| ||||    
T  16833842 tgaattaataacatg--ataaatgatcatgtaatacttcaaaaacacttaatttttttt 16833786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 37925885 - 37925836
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37925885 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 37925836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 1051743 - 1051675
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||||||| || ||||||||||||||||| |||||| || | |||||||| |||||||||||||    
T  1051743 aagggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaatta 1051675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 4833530 - 4833598
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    |||||| |||||| |||||||||||||||||||| ||||||||| |||||| ||| | |||||||||||    
T  4833530 aagggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaatta 4833598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40196532 - 40196685
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| ||||||||||| |||||||| ||||| ||| |||||| ||| | ||||| ||||| ||||| ||||||||| ||| |  ||| || |    
T  40196532 agggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaa 40196631  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
      || |||| ||  |||||  |||||||||||||||||  |||||| |||||||||    
T  40196632 catatcaacctg--ataaacaatcatataatacttcaatcacacttaatttatttt 40196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 33519047 - 33519142
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 113  Q
    ||||| ||||||| ||||||| |||||||||||| ||||||||| || | | |||  |||||||||||| | ||| ||||||||| ||||||||||    
T  33519047 aagggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaa 33519142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 37925840 - 37925931
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| |||| | |||  |||||||||||| | ||| | ||||||| ||||||    
T  37925840 aagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttt 37925931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 8122327 - 8122235
Alignment:
Q  84 ttatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcata----taatacttcaaaaacacttcatttatttt 174  Q
    |||| ||||||||||||| |||||| ||||||||||||||||| |||  |||||| ||||||    |||||||||||||||| || |||||||||    
T  8122327 ttatagacattataaaataatttttagaaaattgaattaacaagatg--ataaattatcatataattaatacttcaaaaacaattaatttatttt 8122235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 31571713 - 31571619
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 114  Q
    ||||||||||| || ||||||||||||||||| | |||||||  ||||| ||| ||||||||||||| ||||  ||||| ||| |||||| ||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaa 31571619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 39856065 - 39856111
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  39856065 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 39856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 47391101 - 47391019
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaa 100  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||  ||||  ||| | ||||||||||| ||||| |||||||    
T  47391101 aagggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaa 47391019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 1051697 - 1051746
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  1051697 tcctctcctcccttcccctcctaaaccctcaatccaaacacacccttaga 1051746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 25887237 - 25887192
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  25887237 tcctcccctcccttcccctcataaaccctcaatccaaacacaccct 25887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 36267748 - 36267797
Alignment:
Q  202 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  36267748 tgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 47390855 - 47390924
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatg 88  Q
    |||||||||||| || ||||| ||||||||||| ||||| ||| |||||| ||| |||||||||||||||    
T  47390855 agggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatg 47390924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 47391057 - 47391102
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||||||||||| || |||||||||||||||||    
T  47391057 ctcccctcccttcccctcttaaaccctccatccaaacacaccctta 47391102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 18231831 - 18231763
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||| | |||| ||| | |||||||||||    
T  18231831 aagggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaatta 18231763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 33655349 - 33655282
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatgg 89  Q
    ||||||||| || ||||||||||||||||| | |||| || |||||| ||| ||||||||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgg 33655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 36267797 - 36267730
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    |||||||||||| || ||||||||||||||||| ||||||||| || | |||||  ||||||||||||    
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaatta 36267730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 34228518 - 34228568
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||| ||||    
T  34228518 tcctcccctcccttctcctcctaaaccttcaattcaaacacaccctaagag 34228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 39646519 - 39646469
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||| |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  39646519 gtgattcctcccctcccttcctctcctaaaccgtcaatccaaacacaccct 39646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 42306571 - 42306485
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||| || |||||||||||||||||   ||||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgtttttt 42306485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 13770993 - 13770948
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||    
T  13770993 tcctcccctcccttcccctcctaaatcctcaatccaaacacaccct 13770948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 18231785 - 18231834
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||||    
T  18231785 tcctcccctcccttcccctcctaaacgctccatccaaacacacccttaga 18231834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 7791896 - 7791831
Alignment:
Q  86 atggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 153  Q
    ||||||| ||||||||  |||||||||||||||| ||| ||||||  |||||| ||||||||||||||    
T  7791896 atggacactataaaatacttttttgaaaattgaaataaaaacatg--ataaataatcatataatactt 7791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 13425119 - 13425187
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||||||| || ||||||||||||||||| || || ||| ||||||||||   |||||||||||    
T  13425119 aagggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaatta 13425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 17853105 - 17853069
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17853105 aagggtgtgtttggatggagggtttaggaggggaggg 17853069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 33519248 - 33519292
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  33519248 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 33519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 36267597 - 36267553
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  36267597 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 13771191 - 13771100
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    ||||||||||||  || ||||||||||||||||| |||||| ||  ||||| ||| | ||||||||||| ||||  ||||| ||| ||||||    
T  13771191 aagggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgttttttt 13771100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 37926036 - 37926083
Alignment:
Q  202 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  37926036 tgagtcctcccctcccttcccttcctaaatcttcaatcctaacacacc 37926083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 4833575 - 4833529
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||||| |||||| || ||||||||| |||||||    
T  4833575 cctcccctcccttcccctcctaaaccctccatccaaacataccctta 4833529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 10315878 - 10315788
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||| ||||||| ||||| |||||||||||||| ||||| ||  | |||||||| | |||||||| || ||||| ||| ||||| |||||    
T  10315878 aagggcgtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgtttttt 10315788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 13770948 - 13771030
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 101  Q
    |||||||||||| || |||| |||||||||||| ||||||||| | |||| ||    ||||||||||| ||||| ||||||||    
T  13770948 agggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaat 13771030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 31571671 - 31571713
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccc 250  Q
    |||||||| ||||||||| |||||| |||||||||||||||||    
T  31571671 ctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 40282241 - 40282191
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 257  Q
    ||||| ||||||||||||| |||||| |||||||||||| ||||| |||||    
T  40282241 cctcctctcccttcccctcctaaaccctcaatccaaacataccctaagaga 40282191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 40282197 - 40282263
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatt 85  Q
    ||||| |||||| || ||||||||||||||||| ||||| ||| |||||  ||| ||||||||||||    
T  40282197 agggtatgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 41496999 - 41496957
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  41496999 tcccctcccttcccctcctaaaccctccatccaaacacaccct 41496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 48881600 - 48881558
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  48881600 tcccctcccttcccctcctaaaccctccatccaaacacaccct 48881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 13771151 - 13771192
Alignment:
Q  212 cctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||| |||||| |||||| |||||||||||||    
T  13771151 cctcccttcccctcctaaaccctcaatctaaacacaccctta 13771192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 18063673 - 18063714
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  18063673 ataaatgatcatataatacttcaatcacacttaatttatttt 18063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 20393734 - 20393693
Alignment:
Q  132 tataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||||||||||||||  |||||| ||||||||    
T  20393734 tataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 23116425 - 23116470
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||    
T  23116425 agtcctcccctcccttcccctcgtaaaccctcggtccaaacacacc 23116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 25887192 - 25887257
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 84  Q
    |||||||||||| || ||||||||| ||||||| ||||||||| | ||| |||| ||||| |||||    
T  25887192 agggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaat 25887257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 33519098 - 33519045
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||| ||||||||||||||||||| |||| | || |||||||||| |||||||    
T  33519098 gtgagccctcccctcccttcccctcctaaaacctccatccaaacactcccttag 33519045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 33655220 - 33655261
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  33655220 ataaatgatcatataatacttcaatcacacttaatttatttt 33655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 37620817 - 37620776
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||||||||||  ||||| ||||||||||||||||    
T  37620817 ctcccctcccttcccctcccaaaccctcaatccaaacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 41008225 - 41008188
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaaca 245  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  41008225 ctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 48094102 - 48093984
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 153  Q
    |||||||| | |||| ||| ||||||||||||| | ||  ||||||||  |||||  | ||||||| ||| || ||||||  ||||||||||||||||||    
T  48094102 ggaggggaggatttacttttcttttttaaattacgaacgctataaaatcttttttatagaattgaaataataaaatgata--aatgatcatataatactt 48094005  T
Q  154 caaaaacacttcatttatttt 174  Q
     ||  |||||| |||||||||    
T  48094004 taaccacacttaatttatttt 48093984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 48881758 - 48881795
Alignment:
Q  216 ccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacaccctta 48881795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 10315839 - 10315879
Alignment:
Q  213 ctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||| ||||||||| |||||||||| ||||||    
T  10315839 ctcccttcccctcctaaaccttccatccaaacacgccctta 10315879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 18127433 - 18127476
Alignment:
Q  205 gtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||| |||||||||||||||| || |||||||||||||    
T  18127433 gtcctcccctcacttcccctcttaaaccatc-atccaaacacacc 18127476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 28074308 - 28074352
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||| |||||| ||| |||||| ||||||||||||||||||    
T  28074308 cctccccttccttcctctcctaaaccctcaatccaaacacaccct 28074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 31364249 - 31364285
Alignment:
Q  212 cctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||||||||| |||||| |||||||||||||||    
T  31364249 cctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 37417835 - 37417871
Alignment:
Q  219 tcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  37417835 tcccctcctaaaccctcaatccaaacacacccttaga 37417871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 37620776 - 37620864
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    |||||||||| || |||||||| |||||||| |||||||||  ||| | |||   |||| |||||||| ||| | ||||||||||||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgatttttt 37620864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 47390899 - 47390855
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||| ||||||||||||| ||| || ||||||||||||||||||    
T  47390899 cctccactcccttcccctcctaacccctcaatccaaacacaccct 47390855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 7e-49; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 34641235 - 34641083
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||||||||||||| ||||||||||||||||  ||| ||||||||    
T  34641235 aagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatga--tttagaaaattg 34641138  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  34641137 aattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 34641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 26136039 - 26135888
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 120  Q
    |||||| |||||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  26136039 ggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttttgaaaattgaat 26135940  T
Q  121 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||| |||  |||||| || |||||||||||||||||||||| |||||||||    
T  26135939 taacaatatg--ataaataattatataatacttcaaaaacacttaatttatttt 26135888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 42772094 - 42771985
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagagagttttctgcttctgctttctcaccttcagctgcagaaccttct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  42772094 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacctttagag--ttttctgcttccgctttctcaccttcagctgcagaaccttct 42771997  T
Q  301 ttaccgtttcat 312  Q
    ||||||||||||    
T  42771996 ttaccgtttcat 42771985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 42772266 - 42772123
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||||||||||||||||||||          ||||||||||| ||| ||| || |||||| |||||||||||||||||||||||||||||||    
T  42772266 agggtgtgtttgaatggagggtttaggag----------gggaaggtttactttgcttcttaaaattacggacattataaaatgattttttgaaaattga 42772177  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  42772176 attaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 42772123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 24253966 - 24253813
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| ||||||||||||| |||||| ||||||| | | |||| ||| ||||||||||||| |||||||||||||||| |||| |||| ||||    
T  24253966 agggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatgagttttagaaagttga 24253867  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||||    
T  24253866 attaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatttt 24253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 40858774 - 40858656
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 153  Q
    |||||||| |||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  40858774 ggaggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacatg--ataaatgatcatataatactt 40858677  T
Q  154 caaaaacacttcatttatttt 174  Q
    ||||||||||  |||||||||    
T  40858676 caaaaacactaaatttatttt 40858656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 10943620 - 10943767
Alignment:
Q  25 tgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaac 124  Q
    |||||| |||||||||||| |||||||  ||||| |||| |||| ||| |||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  10943620 tgtttggatggagggtttaagaggggaaaggaggagaagatttaattttcttttttaaattatagatattataaaatgatttttagaaaattgaattaac 10943719  T
Q  125 aacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||   |||||| || |||||||||||||||||||||| |||||||||    
T  10943720 aacat--aataaataattatataatacttcaaaaacacttaatttatttt 10943767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 17474209 - 17474359
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    ||||||||| || ||||||||||||||| | |  | || || ||||| ||| ||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaattgaatt 17474308  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||| |||  |||||| |||| |||||||||||||||||||| |||||||||    
T  17474309 aacaatatg--ataaataatcaaataatacttcaaaaacacttaatttatttt 17474359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 8432260 - 8432412
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    |||||||||||||||||||||||||| ||||||| | ||||||| |  ||| |||  |||||| |||||  ||||||||||||||||||||  |||||||    
T  8432260 aagggtgtgtttgaatggagggtttacgaggggaagagaggggaggacttacttt--tttttttaattacagacattataaaatgatttttacaaaattg 8432357  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||  |||||| ||  ||||||||||||||||||||| ||| |||||    
T  8432358 aattaacaacatg--ataaataattttataatacttcaaaaacacttaattcatttt 8432412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 41414272 - 41414169
Alignment:
Q  69 ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatt 168  Q
    ||||| |||||||||| | ||||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||||||||||||||| ||| |||    
T  41414272 ttttctttttttaaatcagggacattataaaatgatttttagaaaattgagttaacaacatg--ataaatgatcatataatacttcaaaaacgcttgatt 41414175  T
Q  169 tatttt 174  Q
    ||||||    
T  41414174 tatttt 41414169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 44412603 - 44412452
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 120  Q
    |||||||||| || || |||||  ||||||| ||||||||| |  | | |||  |||||||||||| | ||| | |||||||||||||||||||||||||    
T  44412603 ggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatgattttttgaaaattgaat 44412504  T
Q  121 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  44412503 taacaacatg--ataaatcatcatataatacttcaaaaacacttaatttatttt 44412452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 55428619 - 55428492
Alignment:
Q  23 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 122  Q
    |||||||| || ||||||||||||||||| ||||||||| | |||| ||| ||| ||||||||| |||||||| || ||||||||| |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggacattacaagatgatttttagaaaattgaatta 55428520  T
Q  123 acaacatgatataaatgatcatataatact 152  Q
    ||||| ||  ||||||||||||||||||||    
T  55428519 acaacgtg--ataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 48683823 - 48683703
Alignment:
Q  54 ggaggggaaggtttattttc-cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatact 152  Q
    |||||||| ||||||||||  ||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||   |||||||||||||||||| |    
T  48683823 ggaggggagggtttattttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaacat-tgataaatgatcatataatatt 48683725  T
Q  153 tcaaaaacacttcatttatttt 174  Q
    |||||||||||| |||||||||    
T  48683724 tcaaaaacacttaatttatttt 48683703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 18086035 - 18086133
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||  |||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||    
T  18086035 cttttttaaattacagacattataaaatgttttttagaaaattgaattaacaacataata-aaatgatcataaaatacttcaaaaacacttaatttattt 18086133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 42699669 - 42699765
Alignment:
Q  76 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||| ||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 42699765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 21090129 - 21090224
Alignment:
Q  77 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  21090129 ttttaaattacagatattataaaacgattttttgaaaattgaattaacaacatgatat--attatcatataatacttcaaaaacacttaatttatttt 21090224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 54985750 - 54985838
Alignment:
Q  76 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatata-----aatgatcatataatacttcaaaaa 159  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||||| |     ||||||||||||||||||||||||    
T  54985750 tttttaaattacggacattataaattgatttttagaaaattgaattaacaatatgataaatgaataatgatcatataatacttcaaaaa 54985838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 36727362 - 36727268
Alignment:
Q  77 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||| | |||||||||||| |||||  ||||||| | |||||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  36727362 ttttaaattacgaacattataaaataattttaagaaaattaacttaacaacatg--ataaattatcatataatacttcaaaaacactt-atttatttt 36727268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 46978594 - 46978518
Alignment:
Q  96 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||  |||||| ||||||||||||||||  |||||| ||||||||||||||||||| || |||||||||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgata--aatgattatataatacttcaaaaacatttaatttatttt 46978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 18654600 - 18654753
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa-aattg 117  Q
    |||||||||||| |||||||||||||||||| | | || |||| ||||||  || | ||||||||||| ||||  |||||||| |||||||||| | ||     
T  18654600 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaat-attttttgaagagtta 18654698  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |  ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||||    
T  18654699 acatattaacatg--ataaatgatcatataatacttcaattacacttaatttatttt 18654753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 24560216 - 24560289
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| ||  |||||||||||||||| ||||||||| ||||| |||| ||||||||||||| ||||    
T  24560216 aagggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 24560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 16884064 - 16884124
Alignment:
Q  111 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  16884064 aaaattgaat-aacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 16884124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 41110323 - 41110403
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 101  Q
    |||||||||| ||||||| |||||||||||| |||||| ||||||||| ||| | ||||||||||| ||||| ||| ||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaat 41110403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 44412410 - 44412357
Alignment:
Q  202 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    |||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||    
T  44412410 tgagtcctcccctctcttcccctcctaaaccctcaattcaaacacacccttaga 44412357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 24560261 - 24560213
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  24560261 cctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 24560213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 24560461 - 24560308
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| ||||||||||||||||||||  ||| ||||  ||||| ||| | |||||||||||  |||| ||| ||||| |||||  ||| || |    
T  24560461 agggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaa 24560362  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
      ||  ||||||  ||||| ||||||||||||||||||  ||| || |||||||||    
T  24560361 catattaacatg--ataaacgatcatataatacttcaatcacatttaatttatttt 24560308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 28582753 - 28582681
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||| |  |||| |||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||    
T  28582753 agggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 28582681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 42770099 - 42770051
Alignment:
Q  257 agttttctgcttctgctttctcaccttcagctgcagaaccttctttacc 305  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  42770099 agttttcttcttccgctttctcacctttagctgcagaaccttctttacc 42770051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 44412555 - 44412603
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  44412555 gtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacacc 44412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 5903593 - 5903546
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||    
T  5903593 cctcccctgccttcccctcttaaatcctcaatccaaacacacccttag 5903546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 27197734 - 27197802
Alignment:
Q  104 ttttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||| | |||| |||||||||    
T  27197734 tttttagaaaattgaattaacaacatg--atagatgatcatataatactttaaatatacttaatttatttt 27197802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 27197843 - 27197898
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||||||||||  || ||||| |||||||||||||||| |||||||||||||||||    
T  27197843 gtgagtcctcctttctcttcctctcttaaaccttcaattcaaacacacccttagag 27197898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 34641190 - 34641237
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||    
T  34641190 cctcccctcccttcccctcctaaaccctccatccaaacacacccttag 34641237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 45663220 - 45663279
Alignment:
Q  94 tataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaa 156  Q
    |||||||| ||||||||||||||||| ||||||||||  |||||||||| |||||||||||||    
T  45663220 tataaaat-attttttgaaaattgaaataacaacatg--ataaatgatcttataatacttcaa 45663279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 18654842 - 18654784
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttcctttttt 80  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||| |||| |||||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttt 18654784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 21773819 - 21773777
Alignment:
Q  214 tcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  21773819 tcccttcccctcctaaaccttcaatccaaacatacccttagag 21773777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 25655172 - 25655218
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||    
T  25655172 cctcccctcccttctcctcttcaaccctcaatccaaacacaccctta 25655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 24253762 - 24253717
Alignment:
Q  210 cccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  24253762 cccctccctttccctcctaaaccctcaatccaaacacacccttaga 24253717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 37807321 - 37807176
Alignment:
Q  23 tgtgtttgaatggagggtttagga-ggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat- 120  Q
    |||||||||||||||||||||||| ||||| | ||||  || ||||| ||| | |||||||||| |||||| ||| ||||| |||||| |||| | |||     
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatg-ttttttaaaaagttaata 37807223  T
Q  121 taacaacatgatataaatgatcatataatacttcaaaaacacttcattt 169  Q
    ||  ||||||  ||||| ||||||||||||||||||  |||||| ||||    
T  37807222 tattaacatg--ataaacgatcatataatacttcaatcacacttaattt 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 41110566 - 41110493
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || ||||||||  ||||||| ||||| |||||||||| ||| | ||||||||||| ||||    
T  41110566 aagggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggac 41110493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 220641 - 220569
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||| |||||| ||||||||||||||||| || |||||||||   |||| ||| ||||||||||||| ||||    
T  220641 agggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggac 220569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 28581189 - 28581253
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||| ||||||||||||| || ||| ||||||||| |||||| ||| | |||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaatta 28581253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacaca 247  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacaca 247  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 36568904 - 36568964
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttt 79  Q
    |||||||||||| |||||||||||||||| |||  ||||||||  |||||||||| |||||    
T  36568904 agggtgtgtttggatggagggtttaggagtggaatggaggggagagtttattttcattttt 36568964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 37102158 - 37102194
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37102158 aagggtgtgtttggatggagggtttaggaggggaggg 37102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 21090265 - 21090312
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||||| |||||||||| ||| |||||| |||||||||||||||    
T  21090265 gtgagtcctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 30200098 - 30200133
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    |||||||||||| |||||||||||||||||||||||    
T  30200098 agggtgtgtttggatggagggtttaggaggggaggg 30200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 44412360 - 44412403
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggagggga 61  Q
    |||||||||||||||| ||||||||||||||||| | |||||||    
T  44412360 aagggtgtgtttgaattgagggtttaggaggggaagagagggga 44412403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 40858798 - 40858764
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||| |||||||||||||||||||||||    
T  40858798 gggtgtgtttggatggagggtttaggaggggaggg 40858764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 55428581 - 55428619
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacaca 247  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  55428581 tcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 220401 - 220442
Alignment:
Q  12 atcatcaagggtgtgtttgaatggagggtttaggaggggagg 53  Q
    ||||| |||||||| |||| ||||||||||||||||||||||    
T  220401 atcattaagggtgtatttggatggagggtttaggaggggagg 220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 6803406 - 6803447
Alignment:
Q  212 cctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||| ||||||||| |||||||||||||||||||||| ||||    
T  6803406 cctctcttcccctcctaaaccttcaatccaaacacacactta 6803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 8432308 - 8432259
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||| ||||||||| |||||| || || ||||||||||||||    
T  8432308 agtcctcccctctcttcccctcgtaaaccctccattcaaacacaccctta 8432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 9312516 - 9312471
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||||||||||||| ||||||| |||||||||||| ||||| ||||    
T  9312516 ccctcccttcccctattaaaccctcaatccaaacataccctaagag 9312471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 9312714 - 9312673
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggg 59  Q
    ||||| ||||||| || |||||||||||||||||||||||||    
T  9312714 aagggagtgtttggattgagggtttaggaggggaggggaggg 9312673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 17474407 - 17474452
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||||| | |||| |||||||||||||| |||||    
T  17474407 ctcccctcccttcccctcctcaaccctcaatccaaacacatcctta 17474452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 18654802 - 18654847
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||||| |||||| ||||| ||||||||| ||||    
T  18654802 ctcccctcccttcccctcctaaaccctcaattcaaacacactctta 18654847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 30200320 - 30200263
Alignment:
Q  34 ggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||| |||||||||| ||||||| | |||||| ||| ||||||||||||| ||||    
T  30200320 ggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggac 30200263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 54996792 - 54996833
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||||||||  |||||||||| |||||    
T  54996792 ataaatgatcatataatacttcaatcacacttcattcatttt 54996833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 651969 - 651929
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggg 59  Q
    ||||||||||||  |||||||||||||| ||||||||||||    
T  651969 agggtgtgtttgggtggagggtttaggaagggaggggaggg 651929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 28582709 - 28582753
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||| | ||| ||||||||||||||    
T  28582709 cctcccctcccttcccctcctaaatcctcagtccaaacacaccct 28582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 41110527 - 41110567
Alignment:
Q  213 ctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  41110527 ctcccttcccctcacaaaccctcaatccaaacacaccctta 41110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 41414128 - 41414076
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||| ||||||||||||| ||||| |||||| |||||| ||||| |||||||    
T  41414128 gtgagccctcccctccctttccctcctaaaccctcaatctaaacataccctta 41414076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 46205017 - 46204977
Alignment:
Q  134 taaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||||||||||  |||||| |||||||||    
T  46205017 taaatgatcatataatacttcaatcacacttaatttatttt 46204977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 45257551 - 45257398
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| ||||||| ||||||| |||| |||||| || |||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  45257551 agggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaattga 45257452  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  45257451 attaacaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 45257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 42813865 - 42813712
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| ||| |||||||||||||||| | ||||||| || ||||||| ||||||||||||| | ||||||||||||||||||| ||||||||    
T  42813865 aagggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaattg 42813766  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||| ||  |||||| |||||||||||||| ||||| | || ||||||||    
T  42813765 aattaacaacctg--ataaataatcatataatactttaaaaatatttgatttattt 42813712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 174
Target Start/End: Complemental strand, 31061598 - 31061450
Alignment:
Q  25 tgtttgaatggagggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaa 123  Q
    |||||| || |||||||||||||||||  |||||||| | |||| ||||| ||||||||||||  ||||||||||| ||| |||||||||||||||||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggatttacttttctttttttaaattacagacattataaagtgactttttgaaaattgaattaa 31061499  T
Q  124 caacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||  |||||||||||||||||| ||||||||||||| |||||||||    
T  31061498 caacatg--ataaatgatcatataatatttcaaaaacacttaatttatttt 31061450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 15085756 - 15085853
Alignment:
Q  75 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||    
T  15085756 tttttaaaattacggacattataaaatgatttttagaaaattgaattaacaacttg--ataaatgatcatataatacttcaaaaacacttaatttatttt 15085853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 33265794 - 33265697
Alignment:
Q  75 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  33265794 ttttttaaattatgaacaatgtaaaatgattttttgaaaattgaattaacaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 33265697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 1052771 - 1052907
Alignment:
Q  36 agggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatat 134  Q
    ||||||||||||| ||  |||||||||| |||| ||||| ||||||||||||| || |||||||||| |||||| |||||||||||||||||||||  ||    
T  1052771 agggtttaggaggagaatggaggggaagatttacttttctttttttaaattatcgatattataaaataatttttagaaaattgaattaacaacatg--at 1052868  T
Q  135 aaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||| ||||||| |||||||||| || ||||||||    
T  1052869 aaatgatcgtataatatttcaaaaacatttaatttattt 1052907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 22356248 - 22356134
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca-ttataaaatgattttttgaaaattg 117  Q
    |||||||||||| || |||| |||||||||||| ||||||||| |||| ||||| ||||||||||||| ||||| |||||||||||||||| ||||||||    
T  22356248 agggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggacatttataaaatgatttttagaaaattg 22356149  T
Q  118 aattaacaacatgat 132  Q
    ||||||||| |||||    
T  22356148 aattaacaaaatgat 22356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 45098355 - 45098260
Alignment:
Q  77 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||  |||||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  45098355 ttttaaattacagacattataaaatggtttttgaaaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 45098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 34187759 - 34187666
Alignment:
Q  81 aaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgat--catataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||   |||||||||||||||||||||| |||||||||    
T  34187759 aaattatggacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgattatatataatacttcaaaaacacttaatttatttt 34187666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 35325456 - 35325360
Alignment:
Q  76 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||  ||||||||||||| ||||||  ||||||||||||| |||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  35325456 tttttaaattaacgacattataaaataatttttaaaaaattgaattaataacatgata--aatgatcatataatacttcaaaaatacttaatttatttt 35325360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 31928121 - 31928196
Alignment:
Q  96 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgata--aatgatcatataatacttcaaaaacacttaatttattt 31928196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 3094408 - 3094494
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacac 162  Q
    ||||||||||||| | || ||||||||||||| || |||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  3094408 cttttttaaattacgaacgttataaaatgattcttagaaaattgaattaacaacatg--ataaataatcatataatacttcaaaaacac 3094494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 9313219 - 9313079
Alignment:
Q  32 atggagggtttaggaggggaggggaggggaaggt-ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatg 130  Q
    |||||||||||||||||||| | |||| || ||  ||| ||| | |||||||||||  |||||||||||||||||||| |||||||||||||||||| ||    
T  9313219 atggagggtttaggaggggatgagaggagaggggcttacttttcctttttaaattacagacattataaaatgatttttcgaaaattgaattaacaacttg 9313120  T
Q  131 at--ataaatgatcatataatacttcaaaaacacttcattt 169  Q
    ||  || |  |||||||| ||||||||||||||||| ||||    
T  9313119 ataaatgatcgatcatattatacttcaaaaacacttaattt 9313079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 2380996 - 2381140
Alignment:
Q  23 tgtgtttgaatggagggtttaggagggga-ggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    |||||||| || ||||||||||||||||| |||||||||| |  | ||||| |||||||||| |||      |||||||||| |||| ||||||||||||    
T  2380996 tgtgtttggatagagggtttaggaggggaaggggaggggaggactcatttttcttttttaaaatat------tataaaatgaattttagaaaattgaatt 2381089  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
     ||||||||||  |  |||| |||||||||||||||||||||| |||||||||    
T  2381090 gacaacatgattga--tgatgatataatacttcaaaaacacttaatttatttt 2381140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 8554354 - 8554441
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacact 163  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||||||||| ||||  |||||||||| || |||||||||||||||||    
T  8554354 ctttttcaaattacggacattataaaataattttttaaaaattgaattaacatcatg--ataaatgatcgtacaatacttcaaaaacact 8554441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 21502222 - 21502124
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||| || ||| |||||||||| |||||  |||||||| |||||||||| ||||  |||| |||||||||||||||||||||||| ||||||||    
T  21502222 cttttttaaactacggatattataaaataattttaagaaaattgcattaacaacaagata--aatggtcatataatacttcaaaaacacttaatttattt 21502125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 31795772 - 31795922
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    ||||||||| |||||||||||| |||| || ||||||||| |  ||| ||| | ||||||||||| ||||| ||| ||| | |||||| |||| | || |    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaat 31795871  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||  ||||| ||||||||||||||||||  |||||| |||||||||    
T  31795872 aacaacatg--ataaacgatcatataatacttcaatcacacttaatttatttt 31795922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 42296358 - 42296456
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||| ||| |||||||||||| |||| ||||| ||||||||||||||   |||||||||||||||||| || |||||||||| ||| ||||    
T  42296358 cttttttaaattacggatattataaaatgaattttagaaaaatgaattaacaacat--aataaatgatcatataataatttaaaaacacttaattcattt 42296455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 36052145 - 36052230
Alignment:
Q  77 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 164  Q
    ||||||||||   ||||||||||||||||||| ||||||||||||||||||||   ||| |||||||||| |||||||||||||||||    
T  36052145 ttttaaattacatacattataaaatgatttttagaaaattgaattaacaacat--catacatgatcatatgatacttcaaaaacactt 36052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 16713769 - 16713657
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||  ||| |||||| ||  | || |||| |||||| ||| || ||| |||||||||| |||||| |||||||||    
T  16713769 agggtgtgtttggatggagggtttaggaaaggaagggaggagagagcttgtttttctttttaaaactacggatattataaaataatttttagaaaattga 16713670  T
Q  119 attaacaacatga 131  Q
    ||||| |||||||    
T  16713669 attaataacatga 16713657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 8554446 - 8554495
Alignment:
Q  202 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  8554446 tgagtcctcccctccattcccctcttaaactttcaatccaaacacaccct 8554495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 23748340 - 23748186
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||| | ||| | |||||||| || ||||| ||| |||||  ||||  ||| ||     
T  23748340 aagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagtta 23748241  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |  ||  ||||||  ||||| ||| ||||||||||||||  |||||| |||||||||    
T  23748240 acatattaacatg--ataaacgataatataatacttcaatcacacttgatttatttt 23748186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 15224939 - 15224871
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||||||| ||  |||||||||||||||| ||||||||| |||||| ||| |||||||||||||    
T  15224939 aagggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaatta 15224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 36046205 - 36046293
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||||| ||||||||||||||||||||   |||||||  ||||||||| | ||||||||||| ||||| || |||||| |||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgtttttt 36046293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 41778772 - 41778863
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    ||||||||||||| || |||||||||| |||| | ||||||||| |||||| |||  |  ||||||||||||||| ||||||||| ||||||    
T  41778772 aagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgttttttt 41778863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 35736175 - 35736240
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 84  Q
    |||||||||||| || ||||||||||||||||| ||||||||| || ||| ||| |||||||||||    
T  35736175 agggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 17379890 - 17379846
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  17379890 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 17379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 31061409 - 31061357
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||| |||||| ||| |||||||| |||||||||||||||||||||||||||    
T  31061409 gtgagccctcccatcctttcccctcctaaaccttcaatccaaacacaccctta 31061357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 35736219 - 35736175
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  35736219 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 35736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 36347785 - 36347713
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||| || ||||||||||||||||| |||| ||||  ||||| ||| ||||||||||||| ||||    
T  36347785 agggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggac 36347713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 8426881 - 8426968
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||| ||||||||||| ||||||||||||| |||| |||| |||||| |||   ||||||||||| ||||| ||| ||||| |||||    
T  8426881 ggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgtttttt 8426968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 17380086 - 17380012
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||||||| || ||||||||||||||||| | ||||||| |||||  ||| | ||||||||||| |||||    
T  17380086 aagggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggaca 17380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 23748295 - 23748341
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||    
T  23748295 cctcccctcccttcccctcctaaaccctccatccaaacacaccctta 23748341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 35736381 - 35736435
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||| |||||||||||||| |||| |||||| || |||||||||||||||||||    
T  35736381 gtgagccctcccctcccttcacctcctaaaccctccatccaaacacacccttaga 35736435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 36046401 - 36046443
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 9427029 - 9426980
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||| |||||||||||||| ||||| ||||||||||||||||| ||||||    
T  9427029 cctctcctcccttcccctcctaaactttcaatccaaacacaccattagag 9426980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 35531898 - 35531837
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaa 82  Q
    |||||||||| ||| ||| |||||||||||||||||||||| ||||||  |||| |||||||    
T  35531898 ggtgtgtttggatgaaggttttaggaggggaggggaggggagggtttagattccatttttaa 35531837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 17379846 - 17379894
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttt 67  Q
    |||||||||||| || ||||||||||||||||| ||||||||| |||||    
T  17379846 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttt 17379894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 17380043 - 17380087
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||    
T  17380043 tcccctcacttcccctcctaaaccctcaatccaaacacaccctta 17380087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 22356204 - 22356248
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||    
T  22356204 cctcccctcccttcccctcctaaatcctcaatccaaacacaccct 22356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 31795968 - 31796008
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  31795968 ccctcccttcccctcctaaaccttcaatccaaacaaaccct 31796008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 41778817 - 41778769
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||||    
T  41778817 cctcccctccctttcccttctaaaccctcaatccaaacacacccttaga 41778769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 45257357 - 45257305
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||| ||| |||||||| |||||  ||||||||||||||||||||    
T  45257357 gtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccctta 45257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 17331414 - 17331535
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| |  ||||||| |||||||||  |||||||| |||||| ||| ||||||||| | |  | ||||||||||||||      |||| ||    
T  17331414 aagggtgtgtttgcaaagagggttaaggaggggaaaggaggggagggtttacttttcttttttaattcactggcattataaaatgat------aaaaatg 17331507  T
Q  118 aattaacaacatgatataaatgatcatata 147  Q
    |||||| ||||||  |||||||||||||||    
T  17331508 aattaataacatg--ataaatgatcatata 17331535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35736432 - 35736389
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggagggga 61  Q
    ||||||||||||| ||||||||||||||||| || |||||||||    
T  35736432 aagggtgtgtttggatggagggtttaggaggtgaagggagggga 35736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 251
Target Start/End: Original strand, 36347742 - 36347785
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||    
T  36347742 ctcccttcccttcccctcctaaaccctcaatccaaacacaccct 36347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 39732937 - 39732972
Alignment:
Q  216 ccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39732937 ccttcccctctcaaaccttcaatccaaacacaccct 39732972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 3094547 - 3094601
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||||| ||||||||||| || || |||||| |||||||||||||||| |||||    
T  3094547 gtgagtcttcccctccctttccttcctaaaccctcaatccaaacacaccgttaga 3094601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 9631805 - 9631731
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||||||| |||||||||||||||||| | |||||  || |||| | ||| | ||||||||||| |||||    
T  9631805 aagggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggaca 9631731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 15224896 - 15224942
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacacccttaga 255  Q
    ||||||||||||||||| |||||| |  |||||||||||||||||||    
T  15224896 tcccctcccttcccctcctaaacccttgatccaaacacacccttaga 15224942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 17334006 - 17334056
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||| |||||||||| |||||| ||||| |||| |||||||    
T  17334006 gtgagtcctccccttccttcccctcctaaaccctcaattcaaaaacaccct 17334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 31795816 - 31795766
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||| |||| |||||| || |||||||||||| |||||    
T  31795816 agtcctcccctcccttcacctcataaaccctccatccaaacacactcttag 31795766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 39821902 - 39821868
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||| |||||||||||||||||||||||    
T  39821902 gggtgtgtttggatggagggtttaggaggggaggg 39821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 2241663 - 2241590
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||| |||||||| ||| |||||||||| |||||  | ||||||  ||||||||| | ||||||||||||||||    
T  2241663 aaggatgtgtttggatgaagggtttaggtggggaaagaaggggagagtttatttttcatttttaaattatggac 2241590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 40022615 - 40022522
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 114  Q
    |||||| ||| |||||||||||| |||| || ||||||||| ||||||  || | |||||||||||  |||| ||| ||||| |||||| ||||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaa 40022522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 41778905 - 41778864
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  41778905 ataaatgatcatataatacttcaatcacacttaatttatttt 41778864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 2381042 - 2380986
Alignment:
Q  202 tgagtcctcccctccc-ttcccctcttaaaccttcaatccaaacacacccttagaga 257  Q
    |||||||||||||||| |||||||| |||||| || ||||||||||| ||| |||||    
T  2381042 tgagtcctcccctccccttcccctcctaaaccctctatccaaacacatcctaagaga 2380986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 16713534 - 16713494
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  16713534 tcccttcccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 42296503 - 42296547
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||| |||||||||||||| ||| || ||||||||||||||||||    
T  42296503 cctctcctcccttcccctcctaatccctcaatccaaacacaccct 42296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 26318546 - 26318396
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    ||||||||| |||||| ||||||||||| | ||||||||||| |||| ||| |||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaatt 26318447  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  26318446 aacaacatg--ataattgatcatataatacttcaaaaacacttaatttatttt 26318396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 3841331 - 3841176
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttga--aaat 115  Q
    ||||||||||||| ||| |||||||||||||||| |  |  |||||  ||| ||| ||||||||||||| |||||||||||||||||||||| |  ||||    
T  3841331 aagggtgtgtttggatgaagggtttaggaggggaagaaaatggaagacttacttttcttttttaaattacggacattataaaatgatttttttacaaaat 3841232  T
Q  116 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||| ||||||  |||||| |||||||||||||||||||||| |||||||||    
T  3841231 tgaattaacaa-atgata--aatgatgatataatacttcaaaaacacttaatttatttt 3841176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 9051534 - 9051686
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||| ||||| || |||| |||||||||| |  ||||| || |||||| |||  |||||||||||| ||| ||||||||||||||||| |||||||||    
T  9051534 agggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacggatattataaaatgatttttagaaaattga 9051633  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||  ||||||||||||||  ||||| |||||||||| ||||||||    
T  9051634 attaacaacatg--ataaatgatcatatgctactttaaaaacacttaatttattt 9051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 4097234 - 4097388
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| || ||||||||||||||||| || ||  ||  ||||| |||  |||||| ||| | ||||||||||||||  ||||| ||||||||    
T  4097234 aagggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggacattataaaatattttttagaaaattg 4097333  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||| |||||||||    
T  4097334 aattaacaacatg--ataaatgatcatacaatacttccaaaacacttaatttatttt 4097388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 31799120 - 31799025
Alignment:
Q  64 gtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaaca 161  Q
    ||||| ||| ||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaaca 31799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 15353544 - 15353456
Alignment:
Q  82 aattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||    
T  15353544 aattacggacattataaaatgatttttagaaaattgaattaacaacat--tataaatgatcatataatacatcaaaaacactt-atttattt 15353456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 34176587 - 34176711
Alignment:
Q  35 gagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatat 134  Q
    ||||||||||||||||| |||||||||||  ||| ||| ||||||||||||| | | |||||||| ||||||||  |||||||||||||||| ||   ||    
T  34176587 gagggtttaggaggggatgggaggggaagacttacttttcttttttaaattacgaaaattataaattgatttttaaaaaattgaattaacaatat--aat 34176684  T
Q  135 aaatgatcatataatacttcaaaaaca 161  Q
    |||||||||||||||| ||||||||||    
T  34176685 aaatgatcatataatatttcaaaaaca 34176711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 25468445 - 25468552
Alignment:
Q  65 tttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 164  Q
    |||| ||| |||||||||||||||||||||||||||| |||||  ||||||| | |||||||| ||  ||||||||| ||||||||||||||||||||||    
T  25468445 tttacttttcttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtg--ataaatgattatataatacttcaaaaacactt 25468542  T
Q  165 catttatttt 174  Q
     |||||||||    
T  25468543 aatttatttt 25468552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 15323406 - 15323316
Alignment:
Q  82 aattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||| ||| |||||||| |||||||||    
T  15323406 aattacggacattataaaatgatttttagaaaattgaattaacaacatg--acaaatgatcatataatacatcagaaacacttaatttatttt 15323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 10293492 - 10293354
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    |||||||| |||| ||| ||||||||||||| || |||||||||  | ||| ||| |||||| ||||||  || ||||||||||||||||| ||||| ||    
T  10293492 aagggtgt-tttggatgaagggtttaggaggagaagggaggggagagcttacttttctttttcaaattacagatattataaaatgatttttagaaaactg 10293394  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaa 159  Q
    |||| |||||||   |||||| ||||||||||||||||||||    
T  10293393 aattgacaacat--cataaataatcatataatacttcaaaaa 10293354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 15373668 - 15373739
Alignment:
Q  88 ggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaaca 161  Q
    ||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||| |||||||||    
T  15373668 ggacattataaaatgatttttagaaaattgaattaacaacatg--acaaatgatcatataatacatcaaaaaca 15373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 10818228 - 10818308
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataa 98  Q
    ||||||||||||| || ||||||||||||||||| |||||||||  ||||||||| ||||||||||||| ||||| |||||    
T  10818228 aagggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataa 10818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 16737997 - 16738149
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttga-aaattga 118  Q
    ||||||||||| |||||||||||| ||| ||| | ||||||||| |||| ||| | ||||||||||||||| | ||| ||||| |||||||| ||||| |    
T  16737997 gggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatg-ttttttgataaattaa 16738095  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    | ||| ||||||||||  | ||||||||||||||| || |||||||  ||||||||    
T  16738096 aataataacatgatat--acgatcatataatacttaaataacacttactttatttt 16738149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14515472 - 14515545
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| ||||| |||| ||||||||||||| ||||    
T  14515472 aagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 14515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 23091045 - 23090993
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23091045 gtgagccctcccctcccttcccctcctaaaccttcaatccaaacacaccctta 23090993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 9721182 - 9721136
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  9721182 cctcccctcccttcccctcctaaaccttcaatccaaacacaccctta 9721136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 9721137 - 9721211
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||||||| || || |||||||||||||| ||||||||| |||||||||| | ||||||||||| |||||    
T  9721137 aagggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggaca 9721211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 10818459 - 10818325
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaa 119  Q
    ||||||||||| || ||| ||||||||||||  ||||||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||||  || ||| |     
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaac 10818360  T
Q  120 ttaacaacatgatataaatgatcatataatacttcaa 156  Q
     ||  ||||||  ||||||||||||||||||||||||    
T  10818359 atattaacatg--ataaatgatcatataatacttcaa 10818325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 14515517 - 14515468
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14515517 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 14515468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 14515715 - 14515623
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa 112  Q
    |||||||||||| |||||||||||||||||||| || | |||| ||||||  || | ||||||||||||| ||| |||||||| ||||||||||    
T  14515715 agggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaat-attttttgaa 14515623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 9051734 - 9051778
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacaccctta 9051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 9719034 - 9719104
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||| || ||||||||||||||||| ||||||||| | |||||||| | ||||||||||| |||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggaca 9719104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 23091195 - 23091121
Alignment:
Q  27 tttgaatggagggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaa 100  Q
    |||| |||||||||||||||||||| ||||||||| || ||| ||||| |||||||||||| ||| |||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggatattataaaa 23091121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 19278278 - 19278210
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||| || ||| ||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggtttatttt-cttttttaaattacggac 19278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 665840 - 665923
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 102  Q
    ||||||||||||| ||| |||||||||||||||| | ||||||| |||| ||||| | ||||||||||||| | ||||| |||||    
T  665840 aagggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatg 665923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 10818271 - 10818227
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  10818271 tcccctcccttcccctcctaaaccctcaatccaaacacaccctta 10818227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 30487305 - 30487353
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtt 66  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  30487305 aagggtgtgtttggatggagggtttaggaggggaagggaggggagggtt 30487353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 9719076 - 9719029
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  9719076 tcctcccctcccttcccctcctaaaccctcaatccaaacacacgctta 9719029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 29693083 - 29692969
Alignment:
Q  66 ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaaca-----tgat-ataaatgatcatataatacttcaaaaa 159  Q
    ||||||| |||||||||||||  ||||||||||||| ||| || ||||| | ||||||||| |     | || |||||||||||| ||||||||||||||    
T  29693083 ttatttttcttttttaaattacagacattataaaataattcttagaaaaataaattaacaaaagaaaatcatgataaatgatcatgtaatacttcaaaaa 29692984  T
Q  160 cacttcatttatttt 174  Q
    ||||| |||| ||||    
T  29692983 cacttaatttgtttt 29692969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 30487350 - 30487304
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||    
T  30487350 cctcccctcccttcccctcctaaaccctccatccaaacacaccctta 30487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 31849154 - 31849104
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagaga 257  Q
    |||||||||||||||||||||||||| ||||||| ||||||| || |||||    
T  31849154 cctcccctcccttcccctcttaaaccctcaatcctaacacactctaagaga 31849104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 4097717 - 4097754
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4097717 ccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 4097270 - 4097230
Alignment:
Q  216 ccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacacccttagag 4097230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 4097754 - 4097678
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataa 98  Q
    ||||||||| || ||||||||| ||||||| ||||||| | |||| | ||| ||||||||||||| ||||| |||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataa 4097678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 9298735 - 9298635
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggagggga-----ggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 113  Q
    |||||||||||| ||| |||| |||||||||||     |||||||||| |||||| ||| |  |||||||||| ||||||||| ||||| |||||| |||    
T  9298735 agggtgtgtttggatgaaggggttaggaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgtttttttaaaa 9298636  T
Q  114 a 114  Q
    |    
T  9298635 a 9298635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 21606853 - 21606889
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21606853 aagggtgtgtttggatggagggtttaggaggggaggg 21606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 15323264 - 15323225
Alignment:
Q  212 cctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  15323264 cctcccttcccctcctaaaccctcaatccaaacacaccct 15323225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 15353403 - 15353364
Alignment:
Q  212 cctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  15353403 cctcccttcccctcctaaaccctcaatccaaacacaccct 15353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 28477186 - 28477076
Alignment:
Q  66 ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaaca------tgat-ataaatgatcatataatacttcaaaa 158  Q
    ||||||| |||||||||||||  ||||||||||||| ||| || ||||| | ||||||||| |      | || |||||||||||| |||||||||||||    
T  28477186 ttatttttcttttttaaattacagacattataaaataattcttagaaaaataaattaacaaaagaaaaatcatgataaatgatcatgtaatacttcaaaa 28477087  T
Q  159 acacttcattt 169  Q
    |||||| ||||    
T  28477086 acacttaattt 28477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 19278039 - 19278128
Alignment:
Q  24 gtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 114  Q
    ||||||| |||||||||||||||||||| || ||| ||  ||||| ||| | |||||||||||  |||| |||||||| ||||||| ||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaat-attttttaaaaa 19278128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 4097480 - 4097443
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggagggga 56  Q
    |||||||||| | |||||||||||||||||||||||||    
T  4097480 agggtgtgttaggatggagggtttaggaggggagggga 4097443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 9719273 - 9719208
Alignment:
Q  20 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatt 85  Q
    ||||||||||| || ||||||||| ||||||| | ||||||  |||||| ||| ||||||||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaatt 9719208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 19278237 - 19278278
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    ||||||||||||||||||| |||||  |||||||||||||||    
T  19278237 cctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 9719233 - 9719273
Alignment:
Q  210 cccctcccttcccctcttaaaccttcaatccaaacacaccc 250  Q
    |||||| ||||||||| |||||| |||||||||||||||||    
T  9719233 cccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 12811180 - 12811224
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||    
T  12811180 cctcccctctcttcccatcctaaaccctcaatccaaacacaccct 12811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 25468585 - 25468633
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    |||| |||| ||||||||| |||||||||||| | ||||||||||||||    
T  25468585 gtgaatccttccctcccttaccctcttaaaccattaatccaaacacacc 25468633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 32926777 - 32926737
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  32926777 ataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 4437428 - 4437578
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    ||||||||| ||||||||||||||| || | ||||||||| |  ||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||    
T  4437428 gtgtgtttggatggagggtttaggatggaaagggaggggatgacttatttttcttttttaaattatggatattataaaatgatttttaaaaaattgaatt 4437527  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  4437528 aacaacatg--ataattgatcatataatacttcaaaaacacttgatttatttt 4437578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 37761708 - 37761557
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| ||||||| ||||  |||||| ||||||||| || ||  ||| ||||||||||||||||||||||| ||||||||||| |||||||||    
T  37761708 agggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggacattatgaaatgatttttagaaaattga 37761609  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    ||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||    
T  37761608 attaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatt 37761557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 54576329 - 54576479
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 120  Q
    |||||||||| ||||||||||||| |||||| ||||||||| || ||| ||| |||||||| |||| ||||||||||||||||||| | |||||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatgatttatagaaaattgaat 54576428  T
Q  121 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||| ||  ||||||||| ||||||||||||||||||| || ||||||||    
T  54576429 taacaacgtg--ataaatgattatataatacttcaaaaacatttaatttattt 54576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 43961618 - 43961501
Alignment:
Q  55 gaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttc 154  Q
    ||||||| || ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||    
T  43961618 gaggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaacatg--ataaatgatcatataatacttc 43961521  T
Q  155 aaaaacacttcatttatttt 174  Q
    |||||||||| |||||||||    
T  43961520 aaaaacacttaatttatttt 43961501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 22186908 - 22186810
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||    
T  22186908 cttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgattatataatacttcaaaaacactttatttattt 22186811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 17182518 - 17182638
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttg--aaaattgaattaacaacatgatataaatgatcatataatac 151  Q
    |||||||||| |||| ||| |||||||||||||| ||| ||||||||||||||||||  |||||||||||||||| ||||||  ||||||||||||||||    
T  17182518 ggaggggaagatttacttttcttttttaaattattgacgttataaaatgattttttgcaaaaattgaattaacaatatgata--aatgatcatataatac 17182615  T
Q  152 ttcaaaaacacttcatttatttt 174  Q
    ||||||||||||| |||||||||    
T  17182616 ttcaaaaacacttaatttatttt 17182638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 47846090 - 47846208
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 153  Q
    ||||||||  ||||| ||| |||||||||||| ||||||||||||||| ||||||  ||||||||||||| ||||||  |||||| ||||||||||||||    
T  47846090 ggaggggagagtttacttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatg--ataaataatcatataatactt 47846187  T
Q  154 caaaaacacttcatttatttt 174  Q
    ||||||||||| |||||||||    
T  47846188 caaaaacacttaatttatttt 47846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 7977520 - 7977645
Alignment:
Q  44 ggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatc 142  Q
    |||||| | ||||||||| || ||| ||||| |||||||||||| | |||||||||||| || |||||||||||||||||||||||||  ||||||||||    
T  7977520 ggagggaaagggaggggagggcttacttttctttttttaaattacgaacattataaaataatattttgaaaattgaattaacaacatg--ataaatgatc 7977617  T
Q  143 atataatacttcaaaaacacttcattta 170  Q
    ||||||||||||||||||| || |||||    
T  7977618 atataatacttcaaaaacaattaattta 7977645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 5825141 - 5825013
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| |||||||||||||||| ||| | | || || | |||| ||| ||||||| |||||  |||||||||||||||||||| ||||||||    
T  5825141 aagggtgtgtttggatggagggtttaggagaggaagtggggagaggatttacttttcttttttgaattacagacattataaaatgatttttagaaaattg 5825042  T
Q  118 aattaacaacatgatataaatgatcatataa 148  Q
    |||||||||||||  ||||||||||||||||    
T  5825041 aattaacaacatg--ataaatgatcatataa 5825013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 34995293 - 34995142
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||  || |||||||||||| |||| | ||||| |||  ||| ||| ||||||||||||| ||| ||||| ||||||||||| |||||||||    
T  34995293 agggtgtgtttagattgagggtttaggaagggaagtgagggtaagacttacttttcttttttaaattacggatattatcaaatgatttttagaaaattga 34995194  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||  ||||||  |||||| ||| ||||||||||||||||||||| |||||||||    
T  34995193 atta--aacatg--ataaataatcttataatacttcaaaaacacttaatttatttt 34995142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 21694890 - 21695040
Alignment:
Q  21 ggtgtgtttgaatgg--agggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||||||  |||||||||||||||| |||| |||| || ||| ||| ||||||||||||| ||||| ||||||||| |||||   |||||||    
T  21694890 ggtgtgtttgaatggggagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattga 21694989  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    | |||||| |||||   |||||||||||||||||||||  |||||| |||||||    
T  21694990 aataacaaaatgat---aatgatcatataatacttcaatcacacttaatttatt 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 29993774 - 29993924
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 121  Q
    ||||||||| ||  |||||||||||||||| | ||| ||| |  |  |||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  29993774 gtgtgtttggattaagggtttaggaggggaagtgagtggaggactcgtttttcttttttaaattacggacactataaaatgatttttagaaaattgaatt 29993873  T
Q  122 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||  ||  ||||| ||||||||||||||||| |||| || ||||||    
T  29993874 aacaacatg--attgatgatgatataatacttcaaaaatacttaatctatttt 29993924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 55080768 - 55080670
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||| | |||||||||||| |||||| ||||||| |||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||    
T  55080768 cttttttaaattacgaacattataaaataatttttagaaaatttaattaacaacatg--ataaatgatcataaaatacttcaaaaacacttaacttattt 55080671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 54935313 - 54935230
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 102  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||||||| | ||||||||||| ||||| ||| |||||    
T  54935313 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatg 54935230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 11089705 - 11089619
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacac 162  Q
    ||||||||||||| |||| |||||||||  ||||| ||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  11089705 cttttttaaattacggactttataaaatattttttagaaaattgaattaacaacat--cataaatgatcatatattacttcaaaaacac 11089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 14539460 - 14539363
Alignment:
Q  75 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||| ||||||| | ||||||||||||| || || ||||||| |||||| ||||| |||  ||||||||||||||||||||||||||||| |||||||||    
T  14539460 ttttataaattacgaacattataaaatgtttgttagaaaattaaattaagaacataata--aatgatcatataatacttcaaaaacacttaatttatttt 14539363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 51329983 - 51329887
Alignment:
Q  75 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||| ||| |||||||||| |||| | ||||||||||||||||| |||  ||||||||| ||||||||||||||||| |||| |||||||||    
T  51329983 ttttttaaattagggatattataaaataatttatagaaaattgaattaacaaaatg--ataaatgattatataatacttcaaaaa-acttaatttatttt 51329887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 54001162 - 54001246
Alignment:
Q  75 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 164  Q
    |||||||||||| |||||||||||||| ||||||  |||||||||||   ||||||  ||||||||||||||||||||||||||||||||    
T  54001162 ttttttaaattacggacattataaaataatttttaaaaaattgaatt---aacatg--ataaatgatcatataatacttcaaaaacactt 54001246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 17938115 - 17938259
Alignment:
Q  27 tttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaa 126  Q
    |||| ||||||||||||||||||||  |||||| |  ||||| ||| | |||||||||||||||||||||  |||| |||||  ||| || || ||| ||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  127 catgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||  ||||| ||||||||||||||||||  |||||| ||||||||    
T  17938215 catg--ataaacgatcatataatacttcaatcacacttaatttattt 17938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 27735987 - 27735836
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 120  Q
    |||||||||| |||||||||||||||||||| ||||||  | |||| ||||| | ||||||||||| ||||| ||||||||| |||||  | | ||        
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  121 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||||    
T  27735887 tattaacatg--ataaatgatcatataatacttcaatcacacttaatttatttt 27735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 37711367 - 37711285
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 101  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||||  || | ||||||||||| ||||| ||||||||    
T  37711367 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaat 37711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 41174590 - 41174500
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||| | ||||||| ||| ||||| ||| ||||| |||||    
T  41174590 aagggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggttttt 41174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 44145940 - 44145842
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 153  Q
    |||||||| || |||  |||||||||||| |||  ||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||| ||||||||    
T  44145940 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcat--tataaatgatcatgtaatactt 44145843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 9030390 - 9030309
Alignment:
Q  89 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    |||||||||||||||||||| ||||||| |||||| || |||  ||||||||| ||||||||||| |||||||||| |||||||    
T  9030390 gacattataaaatgatttttagaaaatttaattaataaaatg--ataaatgattatataatactttaaaaacacttaatttatt 9030309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 44145823 - 44145768
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  44145823 gtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccctaagag 44145768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 56135748 - 56135839
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| |||| |||||  |||||||||||| | ||| | ||||||| ||||||    
T  56135748 aagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgttttttt 56135839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 5730830 - 5730983
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa-aattg 117  Q
    |||||||||||| |||||||||||||||||| | | || |||| ||||||  || | ||||||||||| ||||  |||||||| |||||||||| | ||     
T  5730830 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaat-attttttgaagagtta 5730928  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |  ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||||    
T  5730929 acatattaacatg--ataaatgatcatataatacttcaattacacttaatttatttt 5730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatt 85  Q
    ||||||||| || ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 47433743 - 47433861
Alignment:
Q  54 ggaggggaagg-tttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatact 152  Q
    ||||||||||| |||| ||| | |||||||||||||||||||||  |||| |||||  |||||| || ||| |||||   ||||| ||||||||||||||    
T  47433743 ggaggggaagggtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacat---ataaacgatcatataatact 47433839  T
Q  153 tcaaaaacacttcatttatttt 174  Q
    ||||  |||||| |||||||||    
T  47433840 tcaatcacacttaatttatttt 47433861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 49735512 - 49735465
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  49735512 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 49735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 54935060 - 54935135
Alignment:
Q  12 atcatcaagggtgtgtttgaatggagggtttaggaggggagggga-ggggaaggtttattttccttttttaaatta 86  Q
    ||||| ||||||||||||| || ||||||||||||||||| |||| ||||| |||||| ||| |||||||||||||    
T  54935060 atcattaagggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaatta 54935135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 56135793 - 56135746
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  56135793 cctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 56135746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 6938492 - 6938402
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||||||| ||||| |||||| |||||||  |||||||| |||| | ||| | ||||||||||| ||| ||||||||||| |||||    
T  6938492 aagggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgtttttt 6938402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 31348566 - 31348500
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 84  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  31348566 aagggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 49735467 - 49735541
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| |||| | ||| | ||||||||||| |||||    
T  49735467 aagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggaca 49735541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 45742135 - 45741981
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| ||| |||||||||| ||| | |||||||||  ||||| ||| | ||||||||||| ||||| ||| ||||| |||||  ||| ||     
T  45742135 aagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagtta 45742036  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |  ||  ||||||  ||||| ||||||||||||||||||  ||| || |||||||||    
T  45742035 acatattaacatg--ataaacgatcatataatacttcaatcacatttaatttatttt 45741981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 56135881 - 56135840
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  56135881 ataaatgatcatataatacttcaaaaacacttaatttatttt 56135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 6891584 - 6891451
Alignment:
Q  39 gtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaat 138  Q
    ||||||||||||| | |||||||  ||||  ||| | ||||||||||||||||| ||| || || ||||   |||||| || ||| |||||  ||||||     
T  6891584 gtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacat--tataaac 6891487  T
Q  139 gatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||  |||||| |||||||||    
T  6891486 gatcatataatacttcaatcacacttaatttatttt 6891451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 45132739 - 45132667
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||||| ||| ||||||||||||| | |||| || |||||| ||| ||||||||||||| ||||    
T  45132739 agggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggac 45132667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 49735692 - 49735736
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  49735692 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 54320634 - 54320678
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  54320634 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 54320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 26166937 - 26167004
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    |||||||||||| || |||||||||||||||||  ||||||||  |||| |||| |||||||||||||    
T  26166937 agggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaatta 26167004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 31348521 - 31348568
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||    
T  31348521 cctcccctcccttcccctcctaaactctcaatccaaacacacccttag 31348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 54935108 - 54935065
Alignment:
Q  210 cccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  54935108 cccctcccttcccctcctaaaccctcaatccaaacacaccctta 54935065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 1968563 - 1968605
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  1968563 ccctcccttcccctcctaaaccctcaatccaaacacaccctta 1968605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 5731072 - 5731014
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttcctttttt 80  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||| |||| |||||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttt 5731014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 6938447 - 6938493
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||    
T  6938447 cctcccctccattcccctcataaaccttccatccaaacacaccctta 6938493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 7977697 - 7977743
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||    
T  7977697 cctcccctcctttcccctcataaaccctcaatccaaacacaccctta 7977743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 37711182 - 37711136
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||||    
T  37711182 cctcccttcccttcccctcctaaaccctcaatccaaacacaccctta 37711136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 53260717 - 53260759
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggagggg 60  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  53260717 aagggtgtgtttggatggagggtttaggaggggaagggagggg 53260759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1968604 - 1968531
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || ||||||||||||||||| ||||||| |  ||||| ||| | ||||||||||| ||||    
T  1968604 aagggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggac 1968531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 35543354 - 35543411
Alignment:
Q  66 ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaa 123  Q
    ||||||| ||||||||||||| | |||||||||||| ||||||  |||||||||||||    
T  35543354 ttatttttcttttttaaattaggaacattataaaataatttttaaaaaattgaattaa 35543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 46007901 - 46007942
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  46007901 cctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 49735736 - 49735687
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttta 68  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||||||    
T  49735736 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 54320678 - 54320605
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    |||||||||||| || ||||||||||||||||| ||||||||| |||||  |||   ||||||||||| |||||    
T  54320678 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggaca 54320605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 21695133 - 21695053
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataa 98  Q
    ||||||||||||| || | ||||||| ||||||| || || ||| |||||| ||| || |||||||||||||||| |||||    
T  21695133 aagggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataa 21695053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 35248922 - 35248777
Alignment:
Q  27 tttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaa 126  Q
    |||| |||||||||||||||| ||  ||||||||| |||||| ||| |  |||||||||||||||| |  | |||  |||||| ||| || |  ||  ||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  127 catgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||  |||||| |||||||||||||||||  |||||| |||||||||    
T  35248822 catg--ataaataatcatataatacttcaatcacacttaatttatttt 35248777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 37711323 - 37711367
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  37711323 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 41174547 - 41174591
Alignment:
Q  209 tcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||| |||||| || |||||||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccctta 41174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 51075268 - 51075215
Alignment:
Q  92 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatata 147  Q
    |||||||||| ||||||  ||||||||||||||||||||  |||||||||||||||    
T  51075268 attataaaataatttttaaaaaattgaattaacaacatg--ataaatgatcatata 51075215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 54935269 - 54935313
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  54935269 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 17182682 - 17182729
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||| ||| |||||||| |||||| ||||||||||||||||||    
T  17182682 agtcctcccttcctttcccctcataaaccctcaatccaaacacaccct 17182729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 26166980 - 26166937
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||    
T  26166980 ctcccctccattcccctcctaaaccctcaatccaaacacaccct 26166937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 47433953 - 47433886
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||||||  | || |||||||||||||| ||||| ||| |||||| ||| |||||||||||||    
T  47433953 agggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaatta 47433886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 53260759 - 53260716
Alignment:
Q  210 cccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||| |||||| || |||||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccctta 53260716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 55510356 - 55510261
Alignment:
Q  76 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||| | ||| |||||||| |||||   ||||||||| ||||||||||||   ||||||||||||||||||||   |||||| |||||||||    
T  55510356 tttttaaattacgaacactataaaat-attttaaaaaaattgaaataacaacatgatg--aatgatcatataatacttcagtcacacttaatttatttt 55510261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 56135965 - 56135930
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    |||||||||||| |||||||||||||||||||||||    
T  56135965 agggtgtgtttggatggagggtttaggaggggaggg 56135930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 27735749 - 27735835
Alignment:
Q  23 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    |||||||| || ||||||||||||||||| |||| | || |||||| ||| | ||||||||||| ||||  ||||| ||| ||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgttttttt 27735835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 31348316 - 31348410
Alignment:
Q  19 agggtgtgtttgaatggagggtttag-----gaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    |||||||||||| |||||||||||||     ||||||| ||||||| | |||||| ||| | ||||||||||| ||||| ||| ||||| |||||    
T  31348316 agggtgtgtttggatggagggtttagtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgtttttt 31348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 37711137 - 37711215
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggag-----gggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || |||||||||||||     |||| ||||||||| ||||| |||| ||||||||||||| ||||    
T  37711137 aagggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggac 37711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 47846298 - 47846204
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 115  Q
    |||||||||| || ||||||||| |||| || |||| |||| |||||| |||  |||||||||||||| ||| | |||| || |||||| |||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaat 47846204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 47846256 - 47846298
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  47846256 cctcccatcccttctcctcttaaaccctcaatccaaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 54320475 - 54320433
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||    
T  54320475 ccctccctttccctcctaaaccctcaatccaaacacaccctta 54320433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 5731032 - 5731077
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||||| |||||| ||||| ||||||||| ||||    
T  5731032 ctcccctcccttcccctcctaaaccctcaattcaaacacactctta 5731077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 37711275 - 37711234
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  37711275 ataaatgatcatataatacttcaatcacacttaatttatttt 37711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 49735696 - 49735648
Alignment:
Q  34 ggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 83  Q
    |||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  49735696 ggagggtttaggaggggaagggagggg-aggtttagttttcttttttaaa 49735648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 4437626 - 4437658
Alignment:
Q  219 tcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||| |||||||||||||||||||||||||    
T  4437626 tcccctcctaaaccttcaatccaaacacaccct 4437658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 7977742 - 7977674
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||||||| || ||||||||| |||||||  |||||||| |||| | |||  ||||||||||||    
T  7977742 aagggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaatta 7977674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 14539486 - 14539522
Alignment:
Q  217 cttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    |||||||||||||||| |||||||||||||| |||||    
T  14539486 cttcccctcttaaaccctcaatccaaacacaacctta 14539522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 29798322 - 29798286
Alignment:
Q  217 cttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  29798322 cttcccctcctaaaccatcaatccaaacacaccctta 29798286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 34111039 - 34111003
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggg 54  Q
    ||||||||||||  |||||||||||||||||||||||    
T  34111039 aagggtgtgtttagatggagggtttaggaggggaggg 34111003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 37761664 - 37761708
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||||||| ||||| | || |||||||||||||||    
T  37761664 cctcccctcccttccccttttaaatcctccatccaaacacaccct 37761708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 47433909 - 47433953
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||| ||||||||||||| |||||| |||| |||||||||||||    
T  47433909 cctcctctcccttcccctcctaaaccgtcaacccaaacacaccct 47433953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 47846505 - 47846417
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    |||||||||| || ||||||||| |||| || ||||  |||||||||| |||  |||||||||||||| ||| | |||| || ||||||    
T  47846505 ggtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaattatgaacaatgtaaagtgttttttt 47846417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 54320434 - 54320501
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    ||||||||||||| || ||||||||||||||| | |||| |||| |||||  ||| |||||||||||||    
T  54320434 aagggtgtgtttggattgagggtttaggagggaaaggga-gggagggtttgattttcttttttaaatta 54320501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 184847 - 184698
Alignment:
Q  23 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 122  Q
    |||||||| |||||||||||||||||| | |||| |||| |||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggacattataaaatgatttttttaaaattgaatta 184748  T
Q  123 acaacatgatataaatgatcatataatacttc-aaaaacacttcatttattt 173  Q
    ||||||||||||  || ||||||||||||||| |||||||||| ||||||||    
T  184747 acaacatgatat--attatcatataatacttcaaaaaacacttaatttattt 184698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 35513037 - 35512909
Alignment:
Q  23 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 122  Q
    |||||||| |||||||||||||||||||| ||||||||| || ||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggacattataaaatgatttttagaaaattgaatta 35512938  T
Q  123 acaacatgatataaatgatcatataatactt 153  Q
    ||||||||  |||||||||||||||||||||    
T  35512937 acaacatg--ataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 1085488 - 1085643
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaatt 116  Q
    ||||||||||||| |||||||||||||||||||   |||||||| |  ||| |||||||||||||||||| |||||||| |||||||||||| |||||||    
T  1085488 aagggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacggacattagaaaatgatttttagaaaatt 1085587  T
Q  117 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||| ||||| ||||  |||||||||||||||||||||||||||||||| |||||||||    
T  1085588 gaactaacagcatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 1085643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 25268500 - 25268355
Alignment:
Q  27 tttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaa 126  Q
    |||| ||||||||||||| |||||| | ||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||| ||| |||||    
T  25268500 tttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaa 25268401  T
Q  127 catgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    | ||  |||||||||||||||||||||||||||||||| |||||||||    
T  25268400 cgtg--ataaatgatcatataatacttcaaaaacacttaatttatttt 25268355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 20607462 - 20607311
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttatt-ttccttttttaaattatggacattataaaatgattttttgaaaatt 116  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||| | ||  |||||| |||||||||||||||||||||||||||||||||||    
T  20607462 aagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttactatttttttttttaattatggacattataaaatgattttttgaaaatt 20607363  T
Q  117 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
     ||||   ||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  20607362 aaatt---aacatgatat--attatcatataatacttcaaaaacacttaatttattt 20607311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 51303383 - 51303537
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| || ||||||||||||||||||||||||||| || | | |||  ||||||| ||||   ||| | |||||||||||||| |||||||    
T  51303383 aagggtgtgtttggattgagggtttaggaggggaggggaggggagggctcacttttattttttatattaccaacaatgtaaaatgatttttttaaaattg 51303482  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  51303483 aattaacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 51303537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 33643457 - 33643359
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||| || |||  || ||||||||||||||||||||||||||||| ||||||||    
T  33643457 cttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatg--atgaatgatcatataatacttcaaaaacacttaatttattt 33643360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 47071240 - 47071142
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||| |||| ||||||||||||| | ||||||    
T  47071240 cttttttaaattacggacattataaaatgatttttagaaaatttaattaacaacatg--ataaatgatcataaaatatttcaaaaacacttaacttattt 47071143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 35928056 - 35927904
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| || ||||| |||| |||||| |||  |||| | |||| ||| |||||||||||||  ||  ||||||||| |||||  |||||||||    
T  35928056 agggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattacagattttataaaataatttta-gaaaattga 35927958  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||||||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  35927957 attaacaacatgata--aatgatcatataatacttcaaaaatacttaatttatttt 35927904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 2506781 - 2506630
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 120  Q
    |||||||||| |||||| |||||| || ||| |||||| || |  ||| ||| |||||||||||||  || |||||||||| ||||||  ||||| ||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaaatcgaat 2506682  T
Q  121 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||| || |||  ||||||||||||||||||||||||||||| |||||||||    
T  2506681 taacaatataata--aatgatcatataatacttcaaaaacacttaatttatttt 2506630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 13386964 - 13387071
Alignment:
Q  64 gtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacact 163  Q
    ||||| ||| ||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||   |||||||||    
T  13386964 gtttacttttctttttttaattatggacatcataaaacgatttttagaaaattgaattaacaacatg--ataaatgatcatataatacacaaaaaacact 13387061  T
Q  164 tcatttattt 173  Q
    | ||||||||    
T  13387062 taatttattt 13387071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40709292 - 40709445
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| ||  | |||||| ||||||| ||||| ||| |  ||| ||| ||||||||||||| | | |||||||||| |||||| ||||||| |    
T  40709292 agggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaa 40709391  T
Q  119 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |||||| | |||  |||||||||||||||||||||||||||||||| |||| ||||    
T  40709392 attaacgatatg--ataaatgatcatataatacttcaaaaacacttaatttctttt 40709445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 1344757 - 1344639
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 153  Q
    |||||||||  |||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||  |||||||||  |||||| | |||||| ||| |    
T  1344757 ggaggggaaaatttatttttcttttttaaattacggacattgtaaaatgatttttagaaaattgaaccaacaacatg--ataaataaacatatattacat 1344660  T
Q  154 caaaaacacttcatttatttt 174  Q
    ||||||||||| |||| ||||    
T  1344659 caaaaacacttaatttttttt 1344639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 40287310 - 40287407
Alignment:
Q  73 ccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    |||||||||||||| ||||||| | |||||| |||| ||||||||||||||||| || |||  |||||| |||||||||||||||||||||| |||||||    
T  40287310 ccttttttaaatta-ggacattgtgaaatgagttttagaaaattgaattaacaaaatcata--aatgattatataatacttcaaaaacacttaatttatt 40287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40094933 - 40095086
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 118  Q
    |||||||||||| |||||||||||||||||||| || |||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||| | |||| | |    
T  40094933 agggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatg-ttttataaaaagtta 40095031  T
Q  119 attaa-caacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |  ||  ||||||  ||||| ||||||||||||||||||  |||||| |||||||||    
T  40095032 acaaattaacatg--ataaacgatcatataatacttcaatcacacttaatttatttt 40095086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 12234252 - 12234181
Alignment:
Q  21 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||| ||| | ||||||||||| |||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggaca 12234181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 525156 - 525252
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    ||||||||||||| |||||| ||||||| |||||| |||| |||||||||||| ||||||  |||||| ||||||||||||||| | |||| ||||||||    
T  525156 cttttttaaattacggacat-ataaaataatttttagaaa-ttgaattaacaatatgata--aatgattatataatacttcaaacaaacttaatttattt 525251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 30010577 - 30010423
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||| ||| | |||| |||||| ||||| ||  ||||| |||||  | | ||     
T  30010577 aagggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagtta 30010478  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    |  ||  |||||  |||||| ||||||||||||||||||  |||||| |||||||||    
T  30010477 acatattaacat--tataaacgatcatataatacttcaaccacacttaatttatttt 30010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 40709339 - 40709292
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  40709339 agtcctcctctcccttcccctcttaaaccttaaatccaaacacaccct 40709292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 41498403 - 41498473
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatg 88  Q
    ||||||||||||| || ||||||||||||||||| | ||||||| |||||| ||| | |||||||||||||    
T  41498403 aagggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatg 41498473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 12234009 - 12234082
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || ||||||||||||||||| ||||||| | || ||| ||| ||||||||||||| ||||    
T  12234009 aagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggac 12234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 26324058 - 26324013
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctt 252  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  26324058 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctt 26324013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 30010377 - 30010332
Alignment:
Q  206 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  30010377 tcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 30010332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 51303434 - 51303381
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  51303434 gtgagccctcccctcccctcccctcctaaaccctcaatccaaacacacccttag 51303381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 30010332 - 30010404
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||| || ||||||||||||||||| ||||||||| | |||| ||| ||| ||||||||| ||||    
T  30010332 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggac 30010404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 2858932 - 2858999
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    |||||||||||| |||||||||||||||||| | ||||||||| |||||| ||| | ||| |||||||    
T  2858932 agggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaatta 2858999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 35349465 - 35349537
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||||||| |||||||||||| ||||||||||  ||||| |||||| ||| | ||||||||||| |||||    
T  35349465 aagggtgtgtttggatggagggtttaagaggggaggg--ggggagggtttacttttcatttttaaattacggaca 35349537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 38509894 - 38509977
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 102  Q
    |||||||||||| || ||||||||||||||||| ||||| ||| |||| | ||| | ||||||||||| ||||| ||| |||||    
T  38509894 agggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatg 38509977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 47261516 - 47261401
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| |||| || ||||| |||||| | ||||| | |||||| ||| |||||||||| || ||||| ||||||||   |||||  ||||||    
T  47261516 aagggtgtgtttggatgggggatttagaaggggaagagagggtagggtttaattttcttttttaaagtacggacactataaaatacatttttttaaattg 47261417  T
Q  118 aattaacaacatgata 133  Q
    || ||| |||||||||    
T  47261416 aaataaaaacatgata 47261401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 2470730 - 2470820
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 109  Q
    |||||||||||| |||||||||||||||||||| | ||  ||| |||||  ||| | ||||||||||| | ||| ||||||||| ||||||    
T  2470730 agggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgttttttt 2470820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 12234050 - 12234008
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  12234050 ccctcccttcccctcctaaaccctcaatccaaacacaccctta 12234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 17622689 - 17622630
Alignment:
Q  111 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 172  Q
    ||||||||||||| |||||||||  | ||||||||||||||||| ||||||||| |||||||    
T  17622689 aaaattgaattaataacatgata--agtgatcatataatacttctaaaacacttaatttatt 17622630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 20607417 - 20607463
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||    
T  20607417 cctcccctcccttcccctcctaaaccctccatccaaacacaccctta 20607463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 33643318 - 33643268
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||| |||| |||||||||||| ||||||||||||| |||||||||||    
T  33643318 gtgagtcatcccttcccttcccctcctaaaccttcaatctaaacacaccct 33643268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 41498448 - 41498402
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  41498448 cctcccctcacttcccctcctaaaccctcaatccaaacacaccctta 41498402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 2859132 - 2859169
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaac 244  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  2859132 cctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 8530044 - 8529891
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa-tt 116  Q
    |||| |||||||| ||| || ||||||||||||| |||||| ||| ||||| ||| | ||||||||||| ||||| ||| |||| ||||||| |||| ||    
T  8530044 aaggatgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaat-attttttaaaaagtt 8529946  T
Q  117 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
     |  ||  ||||||   |||| ||||||||||||||||||  |||||| ||||||||    
T  8529945 aacatattaacatg--gtaaacgatcatataatacttcaatcacacttaatttattt 8529891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 38510135 - 38510074
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 83  Q
    ||||||||| ||  |||||||||||||||| ||||||||| |||||| ||| ||||||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaa 38510074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 50079496 - 50079537
Alignment:
Q  133 ataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  50079496 ataaatgatcatataatactttaaaaacacttaatttatttt 50079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 52707834 - 52707736
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||   ||||||| |||| ||||||| |||| |  | |||||||||||||  |||||| ||||||||||||||||| || | ||||||||    
T  52707834 cttttttaaattaccaacattatcaaataatttttttaaaaatttaataacaacatgata--aatgatgatataatacttcaaaaatacataatttattt 52707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 1085536 - 1085484
Alignment:
Q  204 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    ||||||||||||| | |||||| |||||| || ||||||||||||||||||||    
T  1085536 agtcctcccctccatccccctcctaaaccctccatccaaacacacccttagag 1085484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 20607223 - 20607263
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggg 59  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  20607223 agggtgtgtttgaattgagggtttaggaggggaagggaggg 20607263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 26324012 - 26324056
Alignment:
Q  17 caagggtgtgtttgaatggagggtttaggaggggaggggagggga 61  Q
    |||||||||||||| || ||||||||||||||||| |||||||||    
T  26324012 caagggtgtgtttggattgagggtttaggaggggaagggagggga 26324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 35349706 - 35349634
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||| ||  |||||||| ||||||| ||||||||| |||||| ||| | ||||||||||| ||||    
T  35349706 agggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggac 35349634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 35349662 - 35349706
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||    
T  35349662 cctcccctcccttcccctcataaacccttaatccaaacacaccct 35349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 35927864 - 35927812
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||| |||||||||| |||||||| |||| | ||||||||||||||||||||    
T  35927864 gtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccctta 35927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 41498649 - 41498565
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggagggg-aggggaggggaaggtttattttccttttttaaattatggacattataaaatg 102  Q
    |||||||||||| |||||| |||||||||||| | ||||||||| | |||| ||| | ||||||||||| ||||| ||| |||||    
T  41498649 agggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatg 41498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 30010532 - 30010579
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||||  |||||| || ||||||||||||||||||    
T  30010532 cctcccctcccttccccttctaaaccctccatccaaacacacccttag 30010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 38510094 - 38510141
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttag 254  Q
    ||||||||||||||||||| |||||| | ||||||||||||| |||||    
T  38510094 cctcccctcccttcccctcctaaacccttaatccaaacacactcttag 38510141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 85
Target Start/End: Complemental strand, 49832753 - 49832722
Alignment:
Q  54 ggaggggaaggtttattttccttttttaaatt 85  Q
    ||||||||||||||||||||||||||||||||    
T  49832753 ggaggggaaggtttattttccttttttaaatt 49832722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 1085684 - 1085734
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||| || |||||||||||||| |||||| || |||||||||||||||    
T  1085684 gtgagtcatctcctcccttcccctcctaaaccctctatccaaacacaccct 1085734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 7444736 - 7444650
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 108  Q
    ||||||||| ||| || |||||| | |||| | ||||||| |||||| ||| | |||| |||||| ||||| |||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgattttt 7444650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 12234210 - 12234252
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 249  Q
    ||||||||||||||||||| |||||| || |||||||||||||    
T  12234210 cctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 20576136 - 20576206
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 92  Q
    ||||||||| || ||||||||||||||||| |||||||||  |||||  || | ||||||||||| |||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggaca 20576206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 2859157 - 2859104
Alignment:
Q  38 ggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||||| ||||||||| |||||| |||  |||||||||||| ||||    
T  2859157 ggtttaggaggggaagggaggggagggtttacttttattttttaaattacggac 2859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 40094977 - 40094928
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||||||| |||||||||| |||||| || ||||||||||||||| ||||    
T  40094977 cctccccttccttcccctcctaaaccctccatccaaacacaccctaagag 40094928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 44210943 - 44211058
Alignment:
Q  55 gaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttc 154  Q
    ||||||| |||||| ||| | ||||||||||||||||   || ||||| | | |  |||||| || |||||||||||||  || ||||||||||||||||    
T  44210943 gaggggagggtttacttttcgtttttaaattatggacc--atgaaatgttctctaaaaaattaaaataacaacatgata--aacgatcatataatacttc 44211038  T
Q  155 aaaaacacttcatttatttt 174  Q
    ||  |||||| |||||||||    
T  44211039 aatcacacttaatttatttt 44211058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 2858976 - 2858932
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||| ||||| |||||| || |||||||||||||||    
T  2858976 cctcccctccctttccctcctaaaccctccatccaaacacaccct 2858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 20576176 - 20576136
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  20576176 ctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 20607263 - 20607223
Alignment:
Q  211 ccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||||||||||||| |||||| ||||| ||||||||||||    
T  20607263 ccctcccttcccctcctaaaccctcaattcaaacacaccct 20607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 32951562 - 32951490
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    |||||||||||| || ||| ||||||||| ||| |||||||||  ||||| ||| | ||||||||||| ||||    
T  32951562 agggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggac 32951490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 35512638 - 35512670
Alignment:
Q  23 tgtgtttgaatggagggtttaggaggggagggg 55  Q
    |||||||| ||||||||||||||||||||||||    
T  35512638 tgtgtttggatggagggtttaggaggggagggg 35512670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 35512997 - 35513037
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacaca 247  Q
    ||||||||||||||||||| |||||| || |||||||||||    
T  35512997 cctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 38509938 - 38509894
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||    
T  38509938 cctcctctcccttcccctcctaaaccctctatccaaacacaccct 38509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 174
Target Start/End: Complemental strand, 242456 - 242307
Alignment:
Q  23 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 122  Q
    |||||||| ||||| ||||||  |||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaaattgaatta 242357  T
Q  123 acaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    || |||||  ||||||||| |||||||| |||||||| ||||||||||||||    
T  242356 acgacatg--ataaatgatgatataataattcaaaaatacttcatttatttt 242307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 17783 - 17641
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||  |||||| ||| |||||||||||||   | ||||||||||||||||||||||||||    
T  17783 aagggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattacaaatattataaaatgattttttgaaaattg 17686  T
Q  118 aattaacaacatgatataaatgatcatataatacttcaaaaacactt 164  Q
    ||||| |||||||  |||||| |||||||||||||||||| ||||||    
T  17685 aattagcaacatg--ataaataatcatataatacttcaaatacactt 17641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 17741 - 17787
Alignment:
Q  210 cccctcccttcccctcttaaaccttcaatccaaacacacccttagag 256  Q
    |||||||||||| ||| |||||| || ||||||||||||||||||||    
T  17741 cccctcccttccactcctaaaccctccatccaaacacacccttagag 17787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 53074 - 52977
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||| || |||||    
T  53074 cttttttaaattatgggcattatgaaatgattttttgaaaattgaactaacaacatg--ataaatgatcatataatatttcaaaaacacttaatgtattt 52977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 8361 - 8241
Alignment:
Q  49 ggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataa 148  Q
    ||||||||||||| || |||  |||||||||||| |||  ||| ||||||||| ||||||  ||||||||||||||||||||  || |||||||||||||    
T  8361 ggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaattaacaacatg--attaatgatcatataa 8264  T
Q  149 tacttcaaaaacacttcatttat 171  Q
    ||||||||||||| || ||||||    
T  8263 tacttcaaaaacagttaatttat 8241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 1452 - 1549
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||| |  |||||||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||| ||||| |||| ||||||||    
T  1452 cttttttaaactgcggacattatagaatgatttttagaaaattgaattaacaacttg--ataaatgatcatataatacttaaaaaatacttaatttattt 1549  T

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Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 1175 - 1244
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||| || ||||||||||||||||| | |||||||  ||||| ||| ||||||||||||| ||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggac 1244  T

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Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 1643 - 1554
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 107  Q
    |||||||||||||||| ||||||||||||| |||  |||||||| || | | |||  |||||||||||| | ||| | ||||||| ||||    
T  1643 aagggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgttttt 1554  T

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Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 1215 - 1175
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||| ||||||||| |||||| |||||||||||||||    
T  1215 ctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0026; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 1592 - 1644
Alignment:
Q  201 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||| |||||||||| |||| ||| |||||| ||||| ||||||||||||||    
T  1592 gtgagccctcccctccattcctctcctaaaccctcaattcaaacacaccctta 1644  T

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Target: scaffold0119 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 37572 - 37474
Alignment:
Q  74 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 173  Q
    |||||||||||||  |||| ||||| ||||||||| ||||| | |||||||||||||  |||| ||||||||||| ||||||||||||||| ||||||||    
T  37572 cttttttaaattacagacaatataagatgatttttagaaaacttaattaacaacatg--ataagtgatcatataacacttcaaaaacacttgatttattt 37475  T

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Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 39186 - 39320
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggagggga-ggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 117  Q
    |||||||||||| ||||||||||||||||||||   || ||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||||  ||| ||     
T  39186 agggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagtta 39285  T
Q  118 aattaacaacatgatataaatgatcatataatacttc 154  Q
    |  ||  ||||||  ||||||||||||||||||||||    
T  39286 acatattaacatg--ataaatgatcatataatacttc 39320  T

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Target: scaffold0067; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 39435 - 39362
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 91  Q
    ||||||||||||| || |||||||||| |||| | ||||||||| |||||| ||| ||||||||||||| ||||    
T  39435 aagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggac 39362  T

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Target: scaffold0067; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 39390 - 39436
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccctta 253  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  39390 cctcccctccctttcccttctaaaccctcaatccaaacacaccctta 39436  T

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Target: scaffold0262 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 16295 - 16379
Alignment:
Q  18 aagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 102  Q
    |||||| |||||| |||||||||||||||||| |  |||||||| |||||| ||| | ||||||||||||| ||| ||| |||||    
T  16295 aagggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatg 16379  T

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Target: scaffold1414 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 473 - 402
Alignment:
Q  92 attataaaatgattttttgaaaattgaa-ttaacaacatgatataaatgatcatataatacttcaaaaacactt 164  Q
    ||||||||||||||||| ||||||| || |||||| |||||||  |||||| ||| ||||||||||||||||||    
T  473 attataaaatgatttttagaaaattaaaattaacagcatgata--aatgataataaaatacttcaaaaacactt 402  T

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Target: scaffold0198 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  22 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 107  Q
    ||||||||| || ||| ||||||||||||| |||||||||  ||||| ||| |||||||||||||  |||| ||| ||||| ||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

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Target: scaffold0198; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 3190 - 3150
Alignment:
Q  208 ctcccctcccttcccctcttaaaccttcaatccaaacacac 248  Q
    |||||||||||||||||| |||||  |||||||||||||||    
T  3190 ctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 6628 - 6584
Alignment:
Q  207 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 251  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||    
T  6628 cctcccctcccttctcctcctaaaacttcaatccaaacacaccct 6584  T

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Target: scaffold0096; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 6584 - 6651
Alignment:
Q  19 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 86  Q
    |||||||||||| || || | ||||||||| || ||||||||| |||||| ||| |||||||||||||    
T  6584 agggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaatta 6651  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 81503 - 81564
Alignment:
Q  111 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 174  Q
    ||||||||| ||| |||||||||  |||||||||||||||||||||  | |||| |||||||||    
T  81503 aaaattgaaataataacatgata--aatgatcatataatacttcaatcatacttgatttatttt 81564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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