View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15101_high_12 (Length: 327)
Name: NF15101_high_12
Description: NF15101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15101_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 16 - 320
Target Start/End: Complemental strand, 9570556 - 9570245
Alignment:
| Q |
16 |
acttgcgtcgttaaaatagaatatattctctcaactcaact-----tgtattttttgtaaacacccaacaaaattgtatataaagttatcagttagttgg |
110 |
Q |
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| T |
9570556 |
acttgcgtcgttaaaatagaatatattctctcaactcaactaaacttgtattttttgtaaacacccaacaaaattgtatataaagttatcagttagttgg |
9570457 |
T |
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| Q |
111 |
gagtccctatccaaactcaactctttctccctctctctcacactcataagcatgtattaatgcataaaccaacaagcgtacatacacaccaaaaaccaaa |
210 |
Q |
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| T |
9570456 |
gagtccctatccaaactcaactctttccccctctctctcacactcataagcatgtattaatgcataaaccaacaggcgtacatacacaccaaaaaccaaa |
9570357 |
T |
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| Q |
211 |
agggcgaaggtatgtttccctttgactcaagaactagaatatgatgataaacaaataaat--aaacacnnnnnnnaaccaatcaataatatttcttctag |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| |
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| T |
9570356 |
agggcgaaggtatgtttccctttgactcaagaactagaatatgatgataaacagataaataaaaacactttttttaaccaatcaataatatttcttctag |
9570257 |
T |
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| Q |
309 |
ccagtataatct |
320 |
Q |
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|||||| ||||| |
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| T |
9570256 |
ccagtagaatct |
9570245 |
T |
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