View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15101_high_7 (Length: 408)
Name: NF15101_high_7
Description: NF15101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15101_high_7 |
 | |
|
| [»] scaffold0400 (2 HSPs) |
| | |
|
| [»] scaffold0365 (2 HSPs) |
| | |
|
| [»] scaffold0289 (3 HSPs) |
| | |
|
Alignment Details
Target: scaffold0400 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 398
Target Start/End: Complemental strand, 13365 - 12972
Alignment:
| Q |
19 |
taatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtca |
118 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
13365 |
taataaatgaagtttcttcacagctacaacttgacctgaaggcaactctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtca |
13266 |
T |
|
| Q |
119 |
aactcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttgt |
215 |
Q |
| |
|
|| || |||||||| || ||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
13265 |
aaatcttctgtggcttcgattatgttctcatataccatttttccatcaaagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgt |
13166 |
T |
|
| Q |
216 |
attcttgtgat--tgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcaccaa |
313 |
Q |
| |
|
|||||| | | |||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||| || ||||| | ||||||||||| |||| |
|
|
| T |
13165 |
attctttttttcttgaagtgtggtagaaaaggtatgagaacccataaacaaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaa |
13066 |
T |
|
| Q |
314 |
aattttgttagttttatgactat---------gaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
|||||||||||| |||||||||| |||| || |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
13065 |
aattttgttagtcttatgactatgaaagttatgaaagtttccacctgatgttgagcaaggctctagaccagagacattaccacacaagcctttg |
12972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 18 - 398
Target Start/End: Complemental strand, 7066 - 6684
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||| || ||||| | ||||||||||| ||||||||| |
|
|
| T |
7066 |
gtaatgaatggagtttcttcaccgctacaacttgtcctgtggggaactctgctttgtaaacacttccgtgtcctcctatcccaatgagatgcttgttgtc |
6967 |
T |
|
| Q |
118 |
aaac---tcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
|||| || || ||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| |
|
|
| T |
6966 |
aaactcttcagttgcttcaacaatgttctcatacaccaattttccatcaaagctccatattgcaaatagattttcagtttgaaattctcctgcagtcttg |
6867 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
||||| ||||| |||||||||| | |||||||||||||| ||||||| |||||||||| |||||| ||| |||||||| || |||||||| | ||||| |
|
|
| T |
6866 |
tattcttttgtgcttgaagttcgacataaaaggcatgagaggccataaagaaataatgctgacaatagagtgcctagagtgatgggtaaaacaaccacca |
6767 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
|||| | ||||| |||||||||||||| || |||||| ||||||||||||| | || |||||| |||||||||||||||||| |
|
|
| T |
6766 |
aaatgtgtttagtcttatgactatgaaagttaccacctaatgttgagcaaggctctaagccagag---ttaccacacaagcctttg |
6684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 398
Target Start/End: Complemental strand, 14008 - 13615
Alignment:
| Q |
19 |
taatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtca |
118 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
14008 |
taataaatgaagtttcttcacagctacaacttgacctgaaggcaactctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtca |
13909 |
T |
|
| Q |
119 |
aactcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttgt |
215 |
Q |
| |
|
|| || |||||||| || ||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
13908 |
aaatcttctgtggcttcgattatgttctcatataccatttttccatcaaagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgt |
13809 |
T |
|
| Q |
216 |
attcttgtgat--tgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcaccaa |
313 |
Q |
| |
|
|||||| | | |||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||| || ||||| | ||||||||||| |||| |
|
|
| T |
13808 |
attctttttttcttgaagtgtggtagaaaaggtatgagaacccataaacaaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaa |
13709 |
T |
|
| Q |
314 |
aattttgttagttttatgactat---------gaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
|||||||||||| |||||||||| |||| || |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
13708 |
aattttgttagtcttatgactatgaaagttatgaaagtttccacctgatgttgagcaaggctctagaccagagacattaccacacaagcctttg |
13615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 18 - 398
Target Start/End: Complemental strand, 7710 - 7328
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||| || ||||| | ||||||||||| ||||||||| |
|
|
| T |
7710 |
gtaatgaatggagtttcttcaccgctacaacttgtcctgtggggaactctgctttgtaaacacttccgtgtcctcctatcccaatgagatgcttgttgtc |
7611 |
T |
|
| Q |
118 |
aaac---tcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
|||| || || ||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| |
|
|
| T |
7610 |
aaactcttcagttgcttcaacaatgttctcatacaccaattttccatcaaagctccatattgcaaatagattttcagtttgaaattctcctgcagtcttg |
7511 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
||||| ||||| |||||||||| | |||||||||||||| ||||||| |||||||||| |||||| ||| |||||||| || |||||||| | ||||| |
|
|
| T |
7510 |
tattcttttgtgcttgaagttcgacataaaaggcatgagaggccataaagaaataatgctgacaatagagtgcctagagtgatgggtaaaacaaccacca |
7411 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
|||| | ||||| |||||||||||||| || |||||| ||||||||||||| | || |||||| |||||||||||||||||| |
|
|
| T |
7410 |
aaatgtgtttagtcttatgactatgaaagttaccacctaatgttgagcaaggctctaagccagag---ttaccacacaagcctttg |
7328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 398
Target Start/End: Original strand, 14532279 - 14532664
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
14532279 |
gtaatgagtgaagtttcttcacagcaacaacttgacctgtaggcaactctgctttgtaaacacttccatgccctccaaccccaatgagatgcttgttgtc |
14532378 |
T |
|
| Q |
118 |
aaa---ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
||| || |||||||| |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
14532379 |
aaaatcttctgtggcttcgataatggtctcgtacaccatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgcgtggttg |
14532478 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
| ||| ||||| |||||||| | | |||||| |||||| ||| ||| |||| ||||| ||||||| |||||||||||| | |||||||||||||||| |
|
|
| T |
14532479 |
tcttcttttgtgcttgaagtttgacaaaaaaggtatgagatcccgtaagcaaaaaatgccaacaatagagtacctagagtgaggggtaaaactagcacca |
14532578 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
|||| ||| |||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
14532579 |
aaatattgctagtcttatgactatgaaagttgccacctgatgttgagcaacacactaggccagagacattaccacacaagcctttg |
14532664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 22 - 398
Target Start/End: Original strand, 14522162 - 14522543
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaa- |
120 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |
|
|
| T |
14522162 |
tgaatggagtttcttcacagctaccacttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattcttgttgtcaaaa |
14522261 |
T |
|
| Q |
121 |
--ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttgtatt |
218 |
Q |
| |
|
|| |||||||| || || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| || |
|
|
| T |
14522262 |
tcttctgtggcttcgatgatattctcatacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtctt |
14522361 |
T |
|
| Q |
219 |
c--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcaccaaaat |
316 |
Q |
| |
|
| ||||| ||||||| | | || || |||||| |||||||||||||||||||||||||| || |||||||| | | |||||||||||||||||| |
|
|
| T |
14522362 |
cttttgtgcttgaagtgcaacaaaattggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaat |
14522461 |
T |
|
| Q |
317 |
tttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
||||||||||||||||||||| || || |||||||||||||||||||| | ||| |||||||||||||| |||||||||||| |
|
|
| T |
14522462 |
tttgttagttttatgactatggaagtttccacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
14522543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 18 - 398
Target Start/End: Complemental strand, 15011578 - 15011193
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
15011578 |
gtaatgagtgaagtttcttcacagctacaacttgacctgtaggcagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtc |
15011479 |
T |
|
| Q |
118 |
aaactcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
||| || |||||||| || ||||||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||| | |||||| |
|
|
| T |
15011478 |
aaaatcttctgtggcttcgattatgttctcatacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtacaggcttg |
15011379 |
T |
|
| Q |
215 |
tattctt--gtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
||||||| ||| |||||||||| | |||||| |||||| ||||||||||| ||||||||||| || || |||||||| | | || ||||||||||| |
|
|
| T |
15011378 |
tattcttttgtgcttgaagttcgacacaaaaggtatgagatcccataaacaattaatgctaacagtagagggcctagagtgagggatagaactagcacca |
15011279 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
||||||||||||| |||||| |||||| |||||||| |||||||||||||| | ||| ||||||||||||||||| ||||||||| |
|
|
| T |
15011278 |
aaattttgttagtcttatgataatgaaatttgccaccagatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15011193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 18 - 398
Target Start/End: Complemental strand, 15037597 - 15037213
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
15037597 |
gtaatgaatgaagtttcttcacagctacaacttgacctgtgggcaactctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtc |
15037498 |
T |
|
| Q |
118 |
aaa---ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
||| || |||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||| || |||||| |
|
|
| T |
15037497 |
aaaatcttcagtggcttcgataatgttctcatacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtgctggcttg |
15037398 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
| ||| ||||| |||||||||| | || ||| |||||| ||||||||||| ||||||||||||| || || ||||| | | || ||||||||||| |
|
|
| T |
15037397 |
tgttcttttgtgcttgaagttcgaca-aagaggtatgagatcccataaacaatcaatgctaacaatagagggccgagagtgagggatagaactagcacca |
15037299 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||| |||||||||||||| | ||| ||||||||||||||||| ||||||||| |
|
|
| T |
15037298 |
aaattttgttagtattatgactatgaaaggtgccacccgatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15037213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 18 - 398
Target Start/End: Complemental strand, 15002685 - 15002300
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
15002685 |
gtaatgagtgaagtttcttcacagctacaacttgacctgtaggcagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtc |
15002586 |
T |
|
| Q |
118 |
aaa---ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
||| || |||||||| || |||||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||| || |||||| |
|
|
| T |
15002585 |
aaaatcttctgtggcttcgattatgttctcgtacaccatttttccatcaaagctccatatttcaaatagattttcaattttcaattcttgtgcaggcttg |
15002486 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
||||| ||||| |||||||||| | |||||| |||||| ||||||||||| ||||||||||||| || || ||||| | | || ||||||||||| |
|
|
| T |
15002485 |
tattcttttgtgcttgaagttcgacaaaaaaggtatgagatcccataaacaatcaatgctaacaatagagggccgagagtgagggatagaactagcacca |
15002386 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||| |||||||||||||| | ||| ||||| ||||||||||||||||||||| |
|
|
| T |
15002385 |
aaattttgttagtattatgactatgaaaggtgccacccgatgttgagcaaggctctaggccagaaacattaccacacaagcctttg |
15002300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 18 - 394
Target Start/End: Complemental strand, 15017693 - 15017312
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||| |
|
|
| T |
15017693 |
gtaataaatgaagtttcttcacagctacaacttgacctgaaggcaactctgctttgtaaacacttgcatgtcctccaaccccaatgagatgtttgttgtc |
15017594 |
T |
|
| Q |
118 |
aaa---ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
||| || |||||||| || ||||||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||| || |||||| |
|
|
| T |
15017593 |
aaaatcttccgtggcttcgattatgttctcatacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttg |
15017494 |
T |
|
| Q |
215 |
tattct--tgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
|||||| |||| |||||||||| | |||| | |||||| ||||||||||| ||||||||||| || || ||||||||| | | || |||||||||| |
|
|
| T |
15017493 |
tattcttctgtgcttgaagttcgacaaaaaaagtatgagatcccataaacaattaatgctaacagtagaggacctagagtgagtgatagaactagcaccc |
15017394 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcc |
394 |
Q |
| |
|
|||||||||| || |||||| ||||||| |||||||| ||| |||||||||| | ||| ||||||| ||||||||||||||| |
|
|
| T |
15017393 |
aaattttgtttgtcttatgattatgaaacttgccaccagatattgagcaaggctctaggccagagatattaccacacaagcc |
15017312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 18 - 398
Target Start/End: Complemental strand, 15033030 - 15032651
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||| |
|
|
| T |
15033030 |
gtaatgaatgaagtttcttcacagctacaacttgacctgtgggcaactctgctttgtaaacacttccatgtcctccaaccccaaggagatgcttgtcgtc |
15032931 |
T |
|
| Q |
118 |
aaa---ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
||| || |||||||| || |||||||| |||| |||||| |||||||||||||||||| |||| ||||||||| |||||||||||| || |||||| |
|
|
| T |
15032930 |
aaaatcttcagtggcttcgattatgttctcgtacaccattttgccatcaaagctccatatttcaaacagattttcaatttgaaattcttgtgcaggcttg |
15032831 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
||||| ||| | ||||| |||| | |||||| |||||| | |||| ||||||||||| || || |||||||| | | || ||||||||||| |
|
|
| T |
15032830 |
tattcttttgcgcttgaaattcgacacaaaaggtatgagatc------acaattaatgctaacagtagagggcctagagtgagggatagaactagcacca |
15032737 |
T |
|
| Q |
313 |
aaattttgttagttttatgactatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
||||||||||||| |||||| ||||||| |||||||| |||||||||||||| | ||| ||||||||||||||||| ||||||||| |
|
|
| T |
15032736 |
aaattttgttagtcttatgattatgaaatttgccaccagatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15032651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 14468381 - 14468190
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
14468381 |
gtaatgaatggagtttcttcacagctacaacttgacctgtaggcaactctgctttgtaaacacttccatgtcctccaaccccaatgagatgcttgttgtc |
14468282 |
T |
|
| Q |
118 |
aaac---tcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctg |
206 |
Q |
| |
|
|||| || |||||||||| |||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
14468281 |
aaactcttctgtggcttcaacaatgttttcatacacaatttttccatcaaaactccatattgaaaatagattttcagtgtgtgattcttctg |
14468190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 14483329 - 14483153
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
14483329 |
gtaatgaatggagtttcttcacagctacaacctgtcctgtaggcaactctgctttgtaaacacttccatgtcctccaaccccaatgagatgcttgttgtc |
14483230 |
T |
|
| Q |
118 |
aaactc---ggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcag |
191 |
Q |
| |
|
||| || |||||||| ||||||||||| |||| |||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
14483229 |
aaaatcttttgtggcttcgataatgttctcgtacaccatttttcaatcaaaactccatattgaaaatagattttcag |
14483153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 332
Target Start/End: Complemental strand, 14504560 - 14504241
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |
|
|
| T |
14504560 |
gtaatgaatggagtttcttcacagctacaacctgtcctgtaggcaactctgctttgtaaacacttccatgtcctccaaccccgatgagatgtttgttgtc |
14504461 |
T |
|
| Q |
118 |
aaac---tcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
|||| || |||||||| | ||| || ||||||| ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||| |||| |
|
|
| T |
14504460 |
aaactcttctgtggcttctacaatattttcatacaccatttttccatcaaaactccatattgaaaatagattttcagtgtgtgattcttctgcaaccttg |
14504361 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcacca |
312 |
Q |
| |
|
|||| ||||| | |||||||| | | | | |||| ||||||| |||||||||||||||| | | | |||||||| || ||||||| || ||||| |
|
|
| T |
14504360 |
gattcttttgtgttcgaagttcgaaatagataataggagatcccataaccaaataatgctaacaaaaaaatgcctagagtgatgggtaaaattaccacca |
14504261 |
T |
|
| Q |
313 |
aaattttgttagttttatga |
332 |
Q |
| |
|
| |||||||||| |||||| |
|
|
| T |
14504260 |
attttttgttagtcttatga |
14504241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 15041161 - 15041076
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagat |
107 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || |||||||| |||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
15041161 |
tgaatggagtttcttcacagctaccacttgaccagtaggcaactctgctttgtaatcacttccatgtactccaaccccaatgagat |
15041076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 15041029 - 15040937
Alignment:
| Q |
308 |
caccaaaattttgttagttttatga--ctatgaaaattgccacctgatgttgagcaaggttttagaccagagacattaccacacaagcctttg |
398 |
Q |
| |
|
|||||||||| ||||||| |||||| |||||||| |||||||| |||||||||||| | | ||| ||||||||||||||||||||||||||| |
|
|
| T |
15041029 |
caccaaaattgtgttagtattatgagactatgaaagttgccaccagatgttgagcaatgctctaggccagagacattaccacacaagcctttg |
15040937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 332
Target Start/End: Complemental strand, 14468145 - 14468062
Alignment:
| Q |
249 |
gagagcccataaacaaataatgctaacaatatagtacctagagttataggtaaaactagcaccaaaattttgttagttttatga |
332 |
Q |
| |
|
|||| ||||||| |||||||||||||||| | | | |||||||| || ||||||| || |||||| |||||||||| |||||| |
|
|
| T |
14468145 |
gagatcccataaccaaataatgctaacaaaaaaatgcctagagtgatgggtaaaattaccaccaattttttgttagtcttatga |
14468062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 169; Significance: 2e-90; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 17027467 - 17027226
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17027467 |
gtaatgaatggagtttcttcacagctacaacttgtccaataggcaactctgcttggtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
17027368 |
T |
|
| Q |
118 |
aaac---tcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
17027367 |
aaactcttcggtggcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggcttg |
17027268 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagc |
254 |
Q |
| |
|
||||| |||| ||||||||| | |||||||||||||||||| |
|
|
| T |
17027267 |
tattcttttgtcattgaagttagatagaaaaggcatgagagc |
17027226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 17557959 - 17557718
Alignment:
| Q |
18 |
gtaatgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17557959 |
gtaatgaatggagtttcttcacagctacaacttgtccaataggcaactctgcttggtaaacacttccatgacctccaaccccaatgagatacttgttgtc |
17557860 |
T |
|
| Q |
118 |
aaac---tcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgtcggcttg |
214 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
17557859 |
aaactcttcggtggcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggcttg |
17557760 |
T |
|
| Q |
215 |
tattc--ttgtgattgaagttcggtagaaaaggcatgagagc |
254 |
Q |
| |
|
||||| |||| ||||||||| | |||||||||||||||||| |
|
|
| T |
17557759 |
tattcttttgtcattgaagttagatagaaaaggcatgagagc |
17557718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 5106 - 5275
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaac |
121 |
Q |
| |
|
|||||||||||| || ||||| || ||||| |||| ||||| |||||||||||||||||||| || |||| | |||||||||| ||||| |||||| |
|
|
| T |
5106 |
tgaatggagttttttaacagcaactacttgacctgagggcaactctgctttgtaaacacttccttgcgctcctagtccaatgagatgcttgtcatcaaac |
5205 |
T |
|
| Q |
122 |
tcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagatttt |
188 |
Q |
| |
|
|| ||||||||||||||||||||||||| |||||| |||||||| |||||||| | ||||| ||||| |
|
|
| T |
5206 |
tcttctgtggcttcaataatgttctcatacaccattttcccatcaaaactccatatagtaaatacatttt |
5275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 13939 - 14108
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaac |
121 |
Q |
| |
|
|||||||||||| || ||||| || ||||| |||| ||||| |||||||||||||||||||| || |||| | |||||||||| ||||| |||||| |
|
|
| T |
13939 |
tgaatggagttttttaacagcaactacttgacctgagggcaactctgctttgtaaacacttccttgcgctcctagtccaatgagatgcttgtcatcaaac |
14038 |
T |
|
| Q |
122 |
tcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagatttt |
188 |
Q |
| |
|
|| ||||||||||||||||||||||||| |||||| |||||||| |||||||| | ||||| ||||| |
|
|
| T |
14039 |
tcttctgtggcttcaataatgttctcatacaccattttcccatcaaaactccatatagtaaatacatttt |
14108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 17766 - 17817
Alignment:
| Q |
137 |
atgttctcatacatcatttttccatcaaagctccatattgcaaatagatttt |
188 |
Q |
| |
|
||||||||||||| |||||| |||||||| |||||||||| ||||| ||||| |
|
|
| T |
17766 |
atgttctcatacaccattttcccatcaaaactccatattgtaaatacatttt |
17817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 15664780 - 15664949
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaac |
121 |
Q |
| |
|
|||||||||||| || ||||| || ||||| ||||| ||||| | |||||||||||||||||| || |||| | |||||||||| ||||| |||||| |
|
|
| T |
15664780 |
tgaatggagttttttaacagcaactacttgacctgtgggcaactttgctttgtaaacacttccttgcgctcctgctccaatgagatgcttgtcatcaaac |
15664879 |
T |
|
| Q |
122 |
tcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagatttt |
188 |
Q |
| |
|
|| || |||||||||||||||||||||| |||||| |||||||| |||||||||| ||||| ||||| |
|
|
| T |
15664880 |
tcttccgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttt |
15664949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 15676614 - 15676783
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaac |
121 |
Q |
| |
|
|||||||| ||| || ||||| || ||||| |||| | ||||||||||||||||||| |||| || |||| || |||||||||| ||||| |||||| |
|
|
| T |
15676614 |
tgaatggaattttttaacagcaactacttgacctgaatgcaaatctgctttgtaaacttttccttgcgctcctactccaatgagatgcttgtcatcaaac |
15676713 |
T |
|
| Q |
122 |
tcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagatttt |
188 |
Q |
| |
|
|| ||||||||||| ||||||||||||| |||||| |||||||| |||||||||| ||||| ||||| |
|
|
| T |
15676714 |
tcttatgtggcttcaattatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttt |
15676783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 17825679 - 17825805
Alignment:
| Q |
65 |
tctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaactcg---gtggcttcaataatgttctcatacatcatttttccat |
161 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || ||||||| || | ||||| ||| ||||||| |||||| |||||||||| |||||| ||| |
|
|
| T |
17825679 |
tctgctttgtaaacacttccatgccctccaactccgatgagatgtttatcatcaaaatcgtctgtggcttgaataatattctcatacaccattttgtcat |
17825778 |
T |
|
| Q |
162 |
caaagctccatattgcaaatagatttt |
188 |
Q |
| |
|
|||| |||||||| | ||||||||||| |
|
|
| T |
17825779 |
caaaactccatatggtaaatagatttt |
17825805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 14606478 - 14606321
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaa- |
120 |
Q |
| |
|
||||||||| || |||||||| || ||||| ||||| |||| | ||||||||| ||||||||||| |||||||| |||||||||| || | ||||| |
|
|
| T |
14606478 |
tgaatggagctttttcacagcaactacttgacctgtgtgcaactttgctttgtagacacttccatgccctccaactccaatgagatgtttttcatcaaaa |
14606379 |
T |
|
| Q |
121 |
--ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattg |
176 |
Q |
| |
|
|| |||||||| | |||||||||||||| | ||||||||||||| ||||||||| |
|
|
| T |
14606378 |
tcttctgtggcttccaaaatgttctcatacaaaaattttccatcaaagttccatattg |
14606321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 16025655 - 16025498
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaa- |
120 |
Q |
| |
|
||||||||| || |||||||| || ||||| ||||| |||| | ||||||||| ||||||||||| |||||||| |||||||||| || | ||||| |
|
|
| T |
16025655 |
tgaatggagctttttcacagcaactacttgacctgtgtgcaactttgctttgtagacacttccatgccctccaactccaatgagatgtttttcatcaaaa |
16025556 |
T |
|
| Q |
121 |
--ctcggtggcttcaataatgttctcatacatcatttttccatcaaagctccatattg |
176 |
Q |
| |
|
|| |||||||| | |||||||||||||| | ||||||||||||| ||||||||| |
|
|
| T |
16025555 |
tcttctgtggcttccaaaatgttctcatacaaaaattttccatcaaagttccatattg |
16025498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 17849102 - 17848933
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaac |
121 |
Q |
| |
|
|||||||||||| |||||||| || ||||| ||||| ||| | ||||||||||||||||| || ||||| || || ||||||| || | ||||| |
|
|
| T |
17849102 |
tgaatggagttttttcacagccactacttgacctgtgtccaacacggctttgtaaacacttccctgccctcctactccgatgagatgtttatcatcaaaa |
17849003 |
T |
|
| Q |
122 |
tcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagatttt |
188 |
Q |
| |
|
|| |||||||||||||| ||||||||| ||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
17849002 |
tcttctgtggcttcaataatactctcatacaccatttttccatcaaaactccatatggtaaatagatttt |
17848933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 31103189 - 31103055
Alignment:
| Q |
32 |
ttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaa---ctcggtgg |
128 |
Q |
| |
|
||||||||||| ||||| |||||||||||| ||||| ||||||||| |||| |||| |||||| ||||||||||| |||| ||||| ||| || | |
|
|
| T |
31103189 |
ttcttcacagcaacaaccaatcctgtaggcaactctgccttgtaaacatttccttgacttccaactccaatgagatatttgtcatcaaaattctcagtag |
31103090 |
T |
|
| Q |
129 |
cttcaataatgttctcatacatcatttttccatca |
163 |
Q |
| |
|
||||||| || || ||| |||||||||| |||||| |
|
|
| T |
31103089 |
cttcaatgatattttcaaacatcattttcccatca |
31103055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 16103463 - 16103293
Alignment:
| Q |
22 |
tgaatggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgttgtcaaac |
121 |
Q |
| |
|
||||||||| || |||||||| || ||||| || || |||| | ||||||||| ||||||||||| || ||||| ||||| |||| || | ||||| |
|
|
| T |
16103463 |
tgaatggagctttttcacagcaactacttggcccgtgtgcaactttgctttgtagacacttccatgccccccaacaccaattagatgtttctcatcaaaa |
16103364 |
T |
|
| Q |
122 |
tcg---gtggcttcaataatgttctcatacatcatttttccatcaaagctccatattgcaaatagattttc |
189 |
Q |
| |
|
|| |||||||| | |||||| ||| ||| ||||||||||||||| ||||||||| ||||| |||||| |
|
|
| T |
16103363 |
tcttctgtggcttccacaatgttttcaaacacaatttttccatcaaagttccatattgtaaatacattttc |
16103293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 16173128 - 16173040
Alignment:
| Q |
25 |
atggagtttcttcacagctacaacttgtcctgtaggcaaatctgctttgtaaacacttccatgacctccaaccccaatgagatacttgt |
113 |
Q |
| |
|
|||||| || |||||||| || ||||| ||||| | || |||||||||||||||||||| || |||||||| ||||| ||||| |||| |
|
|
| T |
16173128 |
atggagctttttcacagcaactacttgacctgtgtgtaactctgctttgtaaacacttccttgccctccaactccaataagatatttgt |
16173040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University