View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15101_low_20 (Length: 238)
Name: NF15101_low_20
Description: NF15101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15101_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 29576335 - 29576129
Alignment:
| Q |
15 |
cataggaaaagaaacactttcaatcaaaagaacaacacacatttgaatctacactataaatagattcttcttcaagtagaaattcaacttatttggtaac |
114 |
Q |
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| T |
29576335 |
cataggaaaagaaacactttcaatcaaaagaacaacacacatttgaatctacactataaatagattcttcttcaagtagaaattcaacttatttggtaac |
29576236 |
T |
|
| Q |
115 |
ttagcttattgatcaagctttaggtttgcgaagaagaataaccgagttgataacatcatccgttggatgaaaaattgtaagcacctcaaaatttaccata |
214 |
Q |
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| T |
29576235 |
ttagcttattgatcaagctttaggtttgcgaagaagaataaccgagttgataacatcatccgttggatgaaaaattgtaagcacctcaaaatttaccata |
29576136 |
T |
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| Q |
215 |
tcattct |
221 |
Q |
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||||||| |
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| T |
29576135 |
tcattct |
29576129 |
T |
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