View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15102_low_4 (Length: 309)
Name: NF15102_low_4
Description: NF15102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15102_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 19 - 293
Target Start/End: Original strand, 15116033 - 15116307
Alignment:
| Q |
19 |
ttaccggctgctatgaaagcaacaaagtcacctaattcaattcttagataagcaaatgaaccacctgcagctggaacttcaacggcaaattctgtgtaac |
118 |
Q |
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| T |
15116033 |
ttaccggctgctatgaaagcaacaaagtcacctaattcaattcttagataagcaaatgaaccacctgcagctggaacttcaacggcgaattctgtgtaac |
15116132 |
T |
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| Q |
119 |
aaaaaacagaaagcattgctgatattcctgaagctacataggataaaactattgctgctcctgcatggttatgagcttcttgaccagttagcacaaagat |
218 |
Q |
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| T |
15116133 |
aaaaaacagaaagcattgctgatattcctgaagctacataggataagactattgctgctcctgcatggttatgagcttcttgaccagttagcacaaagat |
15116232 |
T |
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| Q |
219 |
tcctgcaccaattactgcaccaaagccaaaccaaatcaagtcccaccaattgagacattttttcatttcattctc |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15116233 |
tcctgcaccaattactgcaccaaagccaaaccaaatcaagtcccaccaattgagacattttttcatttcattctc |
15116307 |
T |
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