View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15105_low_10 (Length: 390)
Name: NF15105_low_10
Description: NF15105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15105_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 23 - 376
Target Start/End: Original strand, 47374773 - 47375137
Alignment:
| Q |
23 |
catcttcaatactttatatttttaattcacaagcaaaca---------ggtcgagtatttggtcttctcaagtcatgctctcaaagatatggattgatat |
113 |
Q |
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| T |
47374773 |
catcttcaatactttatatttttaattcacaagcaaacaccaaagataggtcgagtatttggtcttctcaagtcatgctctcaaagatatggattgatat |
47374872 |
T |
|
| Q |
114 |
gaattagaacatcatgtatcaacgttaatttctctatcatgacaaacgtcttggataaatgcttcttctcgagaaatttcctcaacagtgaacaataccg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
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| T |
47374873 |
gaattagaacatcatgtatcaacgttaatttctctatcatgacaaacgtcttggataaaagcttcttctcgaaaaatttcctcaacagtgaacaataccg |
47374972 |
T |
|
| Q |
214 |
attcaaagaaaacaactcaacgttcgaaggcaccctcgtagacttgaattccttcactaacaaggcaacataaaataagccatcctacttgacaaatcac |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47374973 |
attcaaagaaaacaactcaacgttcgaaggcaccctcgtagacttgaattccttcactaacaaggcaacataaaataagccatcctacttgacaaatcac |
47375072 |
T |
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| Q |
314 |
tgcatgtcatagcaag--cacctcgacaacaaaatgttcgttgaggatgatttttgttcttgtcc |
376 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47375073 |
tgcatgtcatagcaagcacacctcgacaacaaaatgttcgttgaggatgatttttgttcttgtcc |
47375137 |
T |
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