View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15108_high_26 (Length: 233)
Name: NF15108_high_26
Description: NF15108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15108_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 15154956 - 15155029
Alignment:
| Q |
149 |
ggaaaagtaatgctccttcatgttgtttttataaaagacatataaatcaacaaaagtgaatatatatgattcat |
222 |
Q |
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| T |
15154956 |
ggaaaagtaatactccttcatgttctttttataaaagacatataaatcaacaaaagtgaatatatatgattcat |
15155029 |
T |
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Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15154805 - 15154878
Alignment:
| Q |
1 |
tatcaatagaataattctattaacttatagttttcattgtataggtttaatttaattaaaagtttaagatcgatag |
76 |
Q |
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||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
15154805 |
tatcaatagaataattctattaactta--gttttcattatataggtttaatttaattaaaagtttaagatcgatag |
15154878 |
T |
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