View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15108_low_16 (Length: 317)
Name: NF15108_low_16
Description: NF15108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15108_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 300
Target Start/End: Complemental strand, 47502803 - 47502508
Alignment:
| Q |
15 |
atgaaacccatcaagattgctgcccacccctgcacaactcctattcaaccatgacaaatgttaattgcaactcgccatttaatgaatgta--------ac |
106 |
Q |
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| T |
47502803 |
atgaaacccatcaagattgctgcccacccctgcacaactcctattcaaccatgacaaatgttaattgcaactcgccatttaatgaatgtaattatgtaac |
47502704 |
T |
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| Q |
107 |
acnnnnnnnnnnnnnnccaatgatgttataagattgaaggtgatcataat---ctttcaactacataaatttaaacagctaaaaccatggttaatcatct |
203 |
Q |
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|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47502703 |
acttttttttttctt-ccaatgatgttataagattgaaggtgatcataataatctttcaactacataaatttaaacagctaaaaccatggttaatcatct |
47502605 |
T |
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| Q |
204 |
ccaaattcaagattaatgaagttcaacttaaagaattgttgtgaccgtgaatgtgcaaaaaattgtgtactatatttgtattgattagtgaagattg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47502604 |
ccaaattcaagattaatgaagttcaacttaaagaattgttgtgaccgtgaatgtgcaaaaaattgtgtactatatttgtattgattagtgaagattg |
47502508 |
T |
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