View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15109_high_7 (Length: 296)
Name: NF15109_high_7
Description: NF15109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15109_high_7 |
 | |
|
| [»] chr1 (3 HSPs) |
| |
|
| [»] scaffold0059 (1 HSPs) |
| |
|
| [»] chr3 (12 HSPs) |
| |
|
| [»] scaffold0554 (1 HSPs) |
| |
|
| [»] chr6 (1 HSPs) |
| |
|
Alignment Details
Target: chr1 (Bit Score: 171; Significance: 7e-92; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 15 - 296
Target Start/End: Complemental strand, 15886224 - 15885941
Alignment:
| Q |
15 |
caaatttagaaagtccttagctctactactatccaacaaagttttcttttacttgcatggtttat---accatagaaggaagaggagtcgtaggtatcaa |
111 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| | |||||||||| ||||||||||| |
|
|
| T |
15886224 |
caaatttagaaagtccttagctctactacaatccaacaaagttttcttttgcttgcatggtttatcttaccatata-ggaagaggagcagtaggtatcaa |
15886126 |
T |
|
| Q |
112 |
gtacaagtcatcttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatac |
211 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||| |||||||| || ||| |||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
15886125 |
gtacaagtcatcttttcttttgacggtcgctccaaattgctcggtcatgtctaagtcctcacctttcgttccatcgggaagcctccaatcaaagtgatac |
15886026 |
T |
|
| Q |
212 |
aacatcaatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||||||| | || |||||||||| |
|
|
| T |
15886025 |
aacaacaatgcaagtgccaactcaacatttaccaaaccaaatgttatgcccgggcatattcttcttccagaaccaaaaggaatgt |
15885941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 85 - 296
Target Start/End: Original strand, 12609715 - 12609926
Alignment:
| Q |
85 |
agaaggaagaggagtcgtaggtatcaagtacaagtcatcttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattcca |
184 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| || ||| |||||||||||||| |
|
|
| T |
12609715 |
agaaggaagaggagctgtaggtatcaaatacaagtcatcttttcttttgacggtcgctccaaattgctcagtcatgtctaagtcctcacctttcattcca |
12609814 |
T |
|
| Q |
185 |
ttgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgc |
284 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || | |
|
|
| T |
12609815 |
ttgggaagcttccaatcaaagtgatacaacatcaatgcaagtgccaactcaacatttatcaaaccaaatgtgctacctggacatattcttcttccagcac |
12609914 |
T |
|
| Q |
285 |
cgaaaggaatgt |
296 |
Q |
| |
|
| || ||||||| |
|
|
| T |
12609915 |
caaagggaatgt |
12609926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 84 - 296
Target Start/End: Original strand, 12636810 - 12637022
Alignment:
| Q |
84 |
tagaaggaagaggagtcgtaggtatcaagtacaagtcatcttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattcc |
183 |
Q |
| |
|
|||||||||||||| | || |||||||||||||||||| ||||||||| | || | ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12636810 |
tagaaggaagaggaatagtgggtatcaagtacaagtcactttttcttttaacattagccccaaattgctcagtcatgtccaaatcctcacctttcattcc |
12636909 |
T |
|
| Q |
184 |
attgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcg |
283 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || |
|
|
| T |
12636910 |
attgggaagcctccaatcaaagtgatataacaacaatgcaagtgccaactcaacatttatcaaaccaaatgtgatgcctgggcatattcttcttcctgca |
12637009 |
T |
|
| Q |
284 |
ccgaaaggaatgt |
296 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
12637010 |
ccaaaaggaatgt |
12637022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 296
Target Start/End: Original strand, 61980 - 62174
Alignment:
| Q |
102 |
taggtatcaagtacaagtcatcttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatc |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || |||||||||| ||||||||||||||| || ||| ||||||||||||||||||| ||||||| |
|
|
| T |
61980 |
taggtatcaagtacaagtcatcttttcttttaactgtcactccaaatttctcagtcatgtccaagtcttcacatttcattccattgggaagcttccaatc |
62079 |
T |
|
| Q |
202 |
aaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
|||||||||||||| || || |||||||| ||||| | | |||||||||||| | ||||||| ||||||||| |||| || || |||||||||| |
|
|
| T |
62080 |
aaagtgatacaacaacattgcaagtgccagctcaagactcatcaaaccaaatttactgcctgggcatattctttttccagcaccaaaaggaatgt |
62174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 296
Target Start/End: Original strand, 23016905 - 23017083
Alignment:
| Q |
118 |
gtcatcttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatc |
217 |
Q |
| |
|
|||||||||||| | || || ||||||||||||||||||||||||| || ||| ||| |||||| ||||||| |||| ||||| |||||||||| | |
|
|
| T |
23016905 |
gtcatcttttctcctcattgtgactccaaattgctcagtcatgtccagttcgtcacatttgattccaccgggaagcttccagtcaaaatgatacaacaac |
23017004 |
T |
|
| Q |
218 |
aatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
| | ||| ||||||||||||||| ||||||| ||||| | || || |||||||||||||| | || |||||||||| |
|
|
| T |
23017005 |
atcgcaagggccaactcaacatttctcaaaccgaatgtactcccagggcatattcttcttccaccaccaaaaggaatgt |
23017083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 296
Target Start/End: Original strand, 23036036 - 23036191
Alignment:
| Q |
141 |
ctccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatt |
240 |
Q |
| |
|
||||||||| |||||||||||||| || ||| ||| |||||| | |||||| |||| ||||| |||||||||| || | ||| |||| |||| ||| |
|
|
| T |
23036036 |
ctccaaattcgtcagtcatgtccaattcttcacttttgattccacttggaagcttccagtcaaaatgatacaacaacatcgcaagggccatgtcaatatt |
23036135 |
T |
|
| Q |
241 |
tatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
| ||||||||||||| | ||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
23036136 |
tctcaaaccaaatgtgctccctgggcatattcttcttccggcaccaaaaggaatgt |
23036191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 23148625 - 23148779
Alignment:
| Q |
142 |
tccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacattt |
241 |
Q |
| |
|
|||||||| ||||||||| |||| || ||||| | |||||| |||||||| |||| ||||| |||||||||| || || || |||| ||||| |||| |
|
|
| T |
23148625 |
tccaaattcctcagtcatatccatttcttcacctgttattccactgggaagcttccagtcaaaatgatacaacaacattgctagggccagctcaatattt |
23148724 |
T |
|
| Q |
242 |
atcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
||||||||||| | | ||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
23148725 |
ctcaaaccaaatatgctccctgggcatattcttcttccggcaccaaaaggaatgt |
23148779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 22941693 - 22941570
Alignment:
| Q |
156 |
tcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgt |
255 |
Q |
| |
|
||||||||||||| || |||||| |||||||||| |||||||||||||||||| || ||||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
22941693 |
tcatgtccaaatcttcatttttcatctcattgggaagtttccaatcaaagtgatacatcaacaatgcaagtgggtactcaacattgaccaaaccaaatgt |
22941594 |
T |
|
| Q |
256 |
tatgcctggacatattcttcttcc |
279 |
Q |
| |
|
|| || ||||| ||||||||||| |
|
|
| T |
22941593 |
tactcccggacacattcttcttcc |
22941570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 23145787 - 23145941
Alignment:
| Q |
142 |
tccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacattt |
241 |
Q |
| |
|
|||||||| ||||||||| |||| || ||||| | |||||| | |||||| |||| ||||| |||||||| | || || ||| ||| ||||| |||| |
|
|
| T |
23145787 |
tccaaattcctcagtcatatccatttcttcacctgttattccactaggaagcttccagtcaaaatgatacaataacattgcaaggaccagctcaatattt |
23145886 |
T |
|
| Q |
242 |
atcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||| || || |||||||||| |
|
|
| T |
23145887 |
gtcaaaccaaatgtgctccctggacatattcttcttccagcaccaaaaggaatgt |
23145941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 296
Target Start/End: Original strand, 22971783 - 22971972
Alignment:
| Q |
107 |
atcaagtacaagtcatcttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagt |
206 |
Q |
| |
|
||||| |||| ||||||||||||| | | | | |||||||| |||||||||| ||||||||| ||| |||||||||| |||||| |||||||||||| |
|
|
| T |
22971783 |
atcaaatacatgtcatcttttcttataacagaagctccaaatagctcagtcatatccaaatcctcacatttcattccaccaggaagcttccaatcaaagt |
22971882 |
T |
|
| Q |
207 |
gatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
|| |||| | || | ||||| || ||||||||| || |||| | | ||||||||||| ||||||||||| || || || ||||||| |
|
|
| T |
22971883 |
gagacaataagaaagcaagtgtcagttcaacatttgccataccatagttaatgcctggacaaattcttcttccagcaccaaatggaatgt |
22971972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 296
Target Start/End: Original strand, 23038945 - 23039062
Alignment:
| Q |
179 |
attccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttc |
278 |
Q |
| |
|
|||||| | |||||| |||| ||||| |||||||||| || || ||| |||| ||||| | || ||||||||||||| | ||||| ||||||||||||| |
|
|
| T |
23038945 |
attccacttggaagcttccagtcaaaatgatacaacaacattgcaagggccagctcaatacttctcaaaccaaatgtgctccctgggcatattcttcttc |
23039044 |
T |
|
| Q |
279 |
cggcgccgaaaggaatgt |
296 |
Q |
| |
|
|||| || |||||||||| |
|
|
| T |
23039045 |
cggcaccaaaaggaatgt |
23039062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 294
Target Start/End: Original strand, 23024140 - 23024291
Alignment:
| Q |
143 |
ccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacattta |
242 |
Q |
| |
|
||||||| ||||||||||||||| || ||| ||| |||||||| |||||| |||||||||| || ||||||| | || ||| || | ||||||| || |
|
|
| T |
23024140 |
ccaaatttctcagtcatgtccaattcttcacttttgattccattaggaagcttccaatcaaaatggtacaacaactttgcaagggctagctcaacacttc |
23024239 |
T |
|
| Q |
243 |
tcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaat |
294 |
Q |
| |
|
|||||||||| | | |||||||||||||||| ||| || || |||||||| |
|
|
| T |
23024240 |
gcaaaccaaatatgctccctggacatattcttcgtcccgcaccaaaaggaat |
23024291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 22916974 - 22916873
Alignment:
| Q |
175 |
tttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattctt |
274 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||| || ||||| ||||| ||||||| ||| | ||| |||||||| | |||||||| |||||| |
|
|
| T |
22916974 |
tttcattgcattgggaagtttccaatcaaagtgatacatcaacaatgcaagtgaaaactcaatattgaccaatccaaatgtgacccctggacacattctt |
22916875 |
T |
|
| Q |
275 |
ct |
276 |
Q |
| |
|
|| |
|
|
| T |
22916874 |
ct |
22916873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 23032581 - 23032735
Alignment:
| Q |
142 |
tccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacattt |
241 |
Q |
| |
|
|||||||| |||||||||||| | || ||| | | ||||||| |||||| |||| ||||| |||||||||| || | || |||| ||||| |||| |
|
|
| T |
23032581 |
tccaaattcctcagtcatgtctagttctgcacttctgattccatcaggaagcgtccagtcaaaatgatacaacaacatcgcgagggccagctcaatattt |
23032680 |
T |
|
| Q |
242 |
atcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||||| || || ||||||| |
|
|
| T |
23032681 |
ctcaaaccaaatgtactccctgggcatattcttcttccggcaccaaagggaatgt |
23032735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 22946270 - 22946370
Alignment:
| Q |
141 |
ctccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatt |
240 |
Q |
| |
|
|||||||| |||||||||||||||||||| || |||||||||| ||||| ||||||||||||| |||| | ||| | ||||| || ||||||||| |
|
|
| T |
22946270 |
ctccaaatagctcagtcatgtccaaatcctcatttttcattccaccaggaagtttccaatcaaagtggcacaataacaaagcaagtgtcagctcaacatt |
22946369 |
T |
|
| Q |
241 |
t |
241 |
Q |
| |
|
| |
|
|
| T |
22946370 |
t |
22946370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 22831755 - 22831815
Alignment:
| Q |
195 |
tccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgt |
255 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
22831755 |
tccaatcaaagtgatacatcaacaatgcaagtgggtactcaacattgaccaaaccaaatgt |
22831815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0554 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0554
Description:
Target: scaffold0554; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 6910 - 6733
Alignment:
| Q |
119 |
tcatcttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatca |
218 |
Q |
| |
|
||||| |||||| | || ||||||||||||| ||| ||||||||||| || ||| ||| |||||| |||||| |||| ||||| |||||||||| || |
|
|
| T |
6910 |
tcatcctttcttctcattgtaactccaaattcctctgtcatgtccaattcttcacttttgattccacatggaagcttccagtcaaaatgatacaacaaca |
6811 |
T |
|
| Q |
219 |
atgaaagtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
| ||| |||| |||||||||| ||||||||||| | | ||||| || ||||||||||| || || |||||||||| |
|
|
| T |
6810 |
tcgcaagcgccagctcaacatttctcaaaccaaatatacttcctgggcaaattcttcttccagcaccaaaaggaatgt |
6733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 296
Target Start/End: Original strand, 21779662 - 21779834
Alignment:
| Q |
124 |
ttttcttttgatggtaactccaaattgctcagtcatgtccaaatccccacctttcattccattgggaagcctccaatcaaagtgatacaacatcaatgaa |
223 |
Q |
| |
|
||||||||| || || ||||| |||| ||||||||||||||| || ||| ||| || ||| | |||||| |||| ||||| |||||||||| || | | |
|
|
| T |
21779662 |
ttttcttttcattgtgactccgaattcctcagtcatgtccaattcttcacttttgatcccacttggaagcttccagtcaaaatgatacaacaacatcgca |
21779761 |
T |
|
| Q |
224 |
agtgccaactcaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgt |
296 |
Q |
| |
|
|| | | ||||| |||| ||||||||||||| | ||||| ||||||||||||||||| || || ||||||| |
|
|
| T |
21779762 |
agggtcgtctcaatatttctcaaaccaaatgtgctccctgggcatattcttcttccggcaccaaatggaatgt |
21779834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 41317229 - 41317195
Alignment:
| Q |
176 |
ttcattccattgggaagcctccaatcaaagtgata |
210 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
41317229 |
ttcattccattgggaagcttccaatcaaagtgata |
41317195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 41329269 - 41329236
Alignment:
| Q |
177 |
tcattccattgggaagcctccaatcaaagtgata |
210 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |
|
|
| T |
41329269 |
tcattccattgggaagcttccaatcaaagtgata |
41329236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 5594310 - 5594250
Alignment:
| Q |
195 |
tccaatcaaagtgatacaacatcaatgaaagtgccaactcaacatttatcaaaccaaatgt |
255 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
5594310 |
tccaatcaaagtgatacatcaacaatgcaagtgggtactcaacattgaccaaaccaaatgt |
5594250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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