View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15109_low_1 (Length: 529)
Name: NF15109_low_1
Description: NF15109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15109_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 494; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 1 - 510
Target Start/End: Original strand, 7524633 - 7525142
Alignment:
| Q |
1 |
agcaatcgaatcacgataataatgaggcgcataaccactagaaccaaccgaaagcgaaatcacatgaaccccatcagcaacagcttcatccatagcagca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7524633 |
agcaatcgaatcacgataataatgaggcgcataaccattagaaccaaccgaaagtgaaatcacatgaaccccatcagcaacagcttcatccatagcagca |
7524732 |
T |
|
| Q |
101 |
agaatatcagaatcaaaacaaccaagtttccaacagattttataagcagcaattctagcttttgttgccattcccttagcttcgcctctagcgaaaccaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7524733 |
agaatatcagaatcaaaacaaccaagtttccaacagattttataagcagcaattctagcttttgttgccattcccttagcttcgcctctagcgaaaccaa |
7524832 |
T |
|
| Q |
201 |
acaaactagcattaccaacaactgatccagctgctgttgaagctgtatgtgttccatgtccttcagtatctctaggagatttggattccacagtttcatc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7524833 |
acaaactagcattaccaacaactgatccagctgctgttgaagctgtatgtgttccatgtccttcagtatctctaggagatttggattccacagtttcatc |
7524932 |
T |
|
| Q |
301 |
aataggtcgccgaagatatgcttcatagcctttataaaaagctttcgctccgataatcttggagttagagttacatgaagaagaaggaaaatctttacta |
400 |
Q |
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|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7524933 |
gataggtcgctgaagatatgcttcatagcctttataaaaagctttcgctccgataatcttggagttagagttacatgaagaagaaggaaaatctttacta |
7525032 |
T |
|
| Q |
401 |
atttcacattttcctttccaagaattcagactttttaatgaatttgaatcatcagatgttgaaaagcttctgagttcgggccatataccggtgtcaagga |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
7525033 |
atttcacattttcctttccaagaattcagactttttaatgaatttgaatcatcagatgttgaaaagcttctgagttcgggccatataccggtgtcaagga |
7525132 |
T |
|
| Q |
501 |
caccgacgat |
510 |
Q |
| |
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|||||||||| |
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| T |
7525133 |
caccgacgat |
7525142 |
T |
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