View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15109_low_2 (Length: 513)

Name: NF15109_low_2
Description: NF15109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15109_low_2
NF15109_low_2
[»] chr5 (18 HSPs)
chr5 (1-262)||(13855930-13856191)
chr5 (294-512)||(13856221-13856438)
chr5 (1-231)||(10105802-10106032)
chr5 (1-239)||(10212236-10212474)
chr5 (1-231)||(10109215-10109445)
chr5 (1-252)||(10209672-10209923)
chr5 (1-231)||(10102717-10102948)
chr5 (1-139)||(12104608-12104746)
chr5 (9-211)||(12109329-12109533)
chr5 (8-150)||(9674763-9674908)
chr5 (92-231)||(9660199-9660338)
chr5 (360-489)||(13865455-13865580)
chr5 (96-168)||(10215906-10215978)
chr5 (92-142)||(37278735-37278785)
chr5 (1-50)||(10215979-10216028)
chr5 (87-146)||(3467667-3467726)
chr5 (203-238)||(10215869-10215904)
chr5 (10-60)||(10219135-10219185)
[»] chr1 (11 HSPs)
chr1 (17-191)||(10542321-10542496)
chr1 (84-197)||(42202383-42202496)
chr1 (84-197)||(42211251-42211364)
chr1 (92-222)||(45151998-45152128)
chr1 (87-222)||(45316380-45316515)
chr1 (83-192)||(2176315-2176424)
chr1 (84-194)||(42409594-42409704)
chr1 (87-156)||(43014361-43014430)
chr1 (92-172)||(42217251-42217331)
chr1 (86-146)||(42417640-42417700)
chr1 (94-197)||(51795024-51795127)
[»] chr8 (5 HSPs)
chr8 (87-231)||(31555089-31555233)
chr8 (87-231)||(31878236-31878380)
chr8 (9-196)||(31558209-31558396)
chr8 (94-141)||(13568429-13568476)
chr8 (87-145)||(4042245-4042303)
[»] chr7 (5 HSPs)
chr7 (87-231)||(3647026-3647170)
chr7 (96-231)||(3649484-3649619)
chr7 (96-231)||(3657601-3657736)
chr7 (92-145)||(3641211-3641264)
chr7 (104-151)||(19523283-19523330)
[»] chr3 (3 HSPs)
chr3 (87-226)||(21884021-21884160)
chr3 (92-197)||(46446219-46446324)
chr3 (90-139)||(35717255-35717304)
[»] chr4 (6 HSPs)
chr4 (83-197)||(25698804-25698918)
chr4 (87-231)||(17889422-17889566)
chr4 (106-156)||(36790854-36790904)
chr4 (106-151)||(49588194-49588239)
chr4 (101-141)||(20918685-20918725)
chr4 (102-146)||(46362544-46362588)
[»] chr6 (1 HSPs)
chr6 (106-151)||(33891611-33891656)
[»] chr2 (4 HSPs)
chr2 (96-156)||(26568347-26568407)
chr2 (106-151)||(5900544-5900589)
chr2 (114-151)||(43633443-43633480)
chr2 (106-142)||(2341338-2341374)


Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 13855930 - 13856191
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccgtgtg 100  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||  || || ||||||||||| |  ||||||| ||||| |||    
T  13855930 tgtctgatagagtcccacatcaaccaattcataaactaaactatgcagttcacatataaaaagaaaggacctctacctcttacaagcacggagccgagtg 13856029  T
Q  101 ttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctcttcac 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13856030 atgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctcttcac 13856129  T
Q  201 agagggctttgcaattttagttcaatattttcctattctaatcttgctctttctaagcaggc 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13856130 agagggctttgcaattttagttcaatattttcctattctaatcttgctctttctaagcaggc 13856191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 294 - 512
Target Start/End: Original strand, 13856221 - 13856438
Alignment:
Q  294 accatcatgaacgtgataaatttcaactctttcattttaatttatgctacctaacacactcatttgtatttgttgaaattcaaataaatcctactaaaat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13856221 accatcatgaacgtgataaatttcaactctttcattttaatttatt-tacttaacacactcatttgtatttgttgaaagtcaaataaatcctactaaaat 13856319  T
Q  394 acgtagataccacataaagttggtagaactctgtgaagtttaaccaatatataatagtgtgtgttaggtagtgtgatattaacatttattcatttcagta 493  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  13856320 acgtagataccacataaagttggtagaactctgtgaagtttaaccaatatataatagagtgtgttaggtagtgtgatattaacatttattcatttcatta 13856419  T
Q  494 gttgtatcattttcttctc 512  Q
    |||||||||||||||||||    
T  13856420 gttgtatcattttcttctc 13856438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 10105802 - 10106032
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccgtgtg 100  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||||||  |||||||| ||| || | |||||| |  || ||||||| |||||||||    
T  10105802 tgtctgacaaagtcccacatcgcccagttcataaactaaactatgcagctttcatataaaatgaaaggatctctactttttttaagcacggagccgtgtg 10105901  T
Q  101 ttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctcttcac 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||| ||||||||||| |     
T  10105902 atgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcataattagcggcatacgctagtttttggaagagtcctctttat 10106001  T
Q  201 agagggctttgcaattttagttcaatatttt 231  Q
     ||||||| ||||| ||||||||||| ||||    
T  10106002 tgagggctctgcaaatttagttcaatttttt 10106032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 10212474 - 10212236
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccgtgtg 100  Q
    |||||||||| |||| ||||| |||||| ||||||||||||||||| | ||||||||||| ||| |  ||||||||||||   | | ||| |||||||||    
T  10212474 tgtctgataatgtcccacatctaccaatgcataaactaaactatgctgatcacatataaaatgaaatgacctctacctccaataggtacggagccgtgtg 10212375  T
Q  101 ttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctcttcac 200  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  | ||||||||||||| ||||||||||| ||||||||| ||||    
T  10212374 atgatcacatagcgaactattctttcgccttttactaaagaatactgtgtgagtgtcacaattagcggcatacgctagtttttggaagagtcctcctcac 10212275  T
Q  201 agagggctttgcaattttagttcaatattttcctattct 239  Q
     || |||| |||||||||||| |||||||||| ||||||    
T  10212274 cgaaggctctgcaattttagtacaatattttcttattct 10212236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 10109215 - 10109445
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaa-agcacgaagccgtgt 99  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||||  || || |||||| |||  | || | |||| ||||||||    
T  10109215 tgtctgataaagtcccacatcgcccaattcataaactaaactatgcagcttgcatataaaaagatagaacctct-ccttgtaaagatcacggagccgtgt 10109313  T
Q  100 gttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctcttca 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||| ||||||||||| |    
T  10109314 gatgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattagcggcatacgctagtttttggaagagtcctcttta 10109413  T
Q  200 cagagggctttgcaattttagttcaatatttt 231  Q
      ||||||| ||||||||||||| ||| ||||    
T  10109414 tggagggctctgcaattttagttaaatttttt 10109445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 10209923 - 10209672
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccgtgtg 100  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||  ||||||||  || || |||| | | |  | ||| |||| |||||||||    
T  10209923 tgtctaataaagtcccacatcgcccaattcataaactaaactatgcagcttgcatataaaaagataggacctatccttgttaaaatcacggagccgtgtg 10209824  T
Q  101 ttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctcttcac 200  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | || || |||||||  |||||||||| ||||| ||||| |     
T  10209823 atgaacacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaatgagtggcatacgttagtttttggaagagttctctttat 10209724  T
Q  201 agagggctttgcaattttagttcaatattttcctattctaatcttgctcttt 252  Q
     ||||||| |||||||||||||||||  ||| |||||| |||||||||||||    
T  10209723 ggagggctctgcaattttagttcaatgattttctattccaatcttgctcttt 10209672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 10102717 - 10102948
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagc--acgaagccgtg 98  Q
    |||| |||||| ||| |||||||||||||||||||||||||||||| ||| || ||||||  || |  ||||| | ||  |||||    ||| ||| |||    
T  10102717 tgtcggataaactcccacatcgaccaattcataaactaaactatgctgcttacttataaaacgaaaagacctc-agcttgttaaaatttacggagctgtg 10102815  T
Q  99 tgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctcttc 198  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||    
T  10102816 tgatgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattagcggcatacactagtttttggaagagtcctcttc 10102915  T
Q  199 acagagggctttgcaattttagttcaatatttt 231  Q
    |  ||||||| ||||| ||||||||||||||||    
T  10102916 attgagggctctgcaaatttagttcaatatttt 10102948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 12104746 - 12104608
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccgtgtg 100  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||  || || |||||||| || |  ||||| | |||||||||    
T  12104746 tgtctaataaagtcccacatcgaccaattcataaactaaattatgcagctcacatataaaaagataggacctctacttcttgtaagcatggagccgtgtg 12104647  T
Q  101 ttgatcacatagcgaactattctttcgccttttactaaa 139  Q
     ||||||||||||||||||||||||||||||||||||||    
T  12104646 atgatcacatagcgaactattctttcgccttttactaaa 12104608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 12109533 - 12109329
Alignment:
Q  9 aaagtccaacatcgaccaattcataaact-aaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccgtgtgttgatca 107  Q
    ||||||| |||||||||||| |||||||| |||||| ||  |||| ||||||| ||| |  ||||||||||||   ||||||| |||||  || ||||||    
T  12109533 aaagtcccacatcgaccaatgcataaactgaaactaagcttctcatatataaaatgaaatgacctctacctccaataagcacggagccgcctgatgatca 12109434  T
Q  108 catagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgg-gagagtcctcttcacagaggg 206  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  | ||| | ||||||| |||||||||||  |||||| ||||||  |||||    
T  12109433 catagcaaactattctttcgccttttactaaagaataccgtgtgagcgtcacaatttgtggcatacgctagtttttggaaagagtcatcttcattgaggg 12109334  T
Q  207 ctttg 211  Q
    |||||    
T  12109333 ctttg 12109329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 9674908 - 9674763
Alignment:
Q  8 taaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccg---tgtgttga 104  Q
    |||||||| |||||  ||||| ||||| ||||||||||| ||||||||||||| | | || ||||||||||  |||||||||| |||||   |||| |||    
T  9674908 taaagtcccacatcctccaatgcataagctaaactatgctgctcacatataaaattaaagaacctctacctttttaaagcacggagccgccgtgtgatga 9674809  T
Q  105 tcacatagcgaactattctttcgccttttactaaagaataccgtgt 150  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  9674808 tcacaaagtgaactattctttcgccttttactaaagaataccgtgt 9674763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 9660338 - 9660199
Alignment:
Q  92 agccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagt 191  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||  | |||||| |||||  | ||||||||| |||||    
T  9660338 agccttgtgatgatcacatagcgaactattattttgccttttactaaagaatactgtgtgaacgtcacaattagcagcatatgccagtttttggaagagt 9660239  T
Q  192 cctcttcacagagggctttgcaattttagttcaatatttt 231  Q
    ||| ||||  ||| ||| ||||||||||||||||||||||    
T  9660238 cctattcatggagtgctctgcaattttagttcaatatttt 9660199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 360 - 489
Target Start/End: Original strand, 13865455 - 13865580
Alignment:
Q  360 tatttgttgaaattcaaataaatcctactaaaatacgtagataccacataaagttggtagaactc-tgtgaagtttaaccaatatataatagtgtgtgtt 458  Q
    |||||||| |||||||||| ||||||||||||||| |||||| ||||||||| ||| || |||||  ||||| ||||||||  ||||||||   ||||||    
T  13865455 tatttgttaaaattcaaattaatcctactaaaatatgtagattccacataaatttgctataactcaagtgaattttaacca--atataata--atgtgtt 13865550  T
Q  459 aggtagtgtgatattaacatttattcatttc 489  Q
    |||||||||||| |||||| |||||||||||    
T  13865551 aggtagtgtgatgttaaca-ttattcatttc 13865580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 10215978 - 10215906
Alignment:
Q  96 gtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcgg 168  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||| ||| | ||||||||    
T  10215978 gtgtgttgatcacatagtaaactattcttttgccttttactaaagaataccttgtgagtgttacaattagcgg 10215906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 37278785 - 37278735
Alignment:
Q  92 agccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaa 142  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  37278785 agccgtgtgatgagcacataacgaactattctttcgccttttactaaagaa 37278735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10216028 - 10215979
Alignment:
Q  1 tgtctgataaagtccaacatcgaccaattcataaactaaactatgcagct 50  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  10216028 tgtctgataaagtcccacatcgaccaattcagaaactaaactatggagct 10215979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 3467726 - 3467667
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaatacc 146  Q
    |||| ||||||||| ||| | || ||| ||||||||||||||||||||||||||||||||    
T  3467726 cacgcagccgtgtgatgagctcaaagcaaactattctttcgccttttactaaagaatacc 3467667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 10215904 - 10215869
Alignment:
Q  203 agggctttgcaattttagttcaatattttcctattc 238  Q
    |||||| |||||||||||||||||||||||||||||    
T  10215904 agggctctgcaattttagttcaatattttcctattc 10215869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 10219185 - 10219135
Alignment:
Q  10 aagtccaacatcgaccaattcataaactaaactatgcagctcacatataaa 60  Q
    |||||| ||||| |||||||||||||||||||||||| ||| || ||||||    
T  10219185 aagtcccacatcaaccaattcataaactaaactatgctgcttacttataaa 10219135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 10542321 - 10542496
Alignment:
Q  17 acatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctcct-taaagcacgaagccgtgtgttgatcacatagcga 115  Q
    |||||||| ||| ||| |||| ||||| || ||||||||||||| ||| || || |||| |   | ||||||||| ||||||||| ||||||||||||||    
T  10542321 acatcgactaatacatcaacttaactaagctgctcacatataaaatgaaaggacatctaacagttataaagcacggagccgtgtgatgatcacatagcga 10542420  T
Q  116 actattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagt 191  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||    
T  10542421 actattctttcgccttttactaaagaataccgtgtgagcgttacaattagcggcatacgctagtttttggaagagt 10542496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 42202496 - 42202383
Alignment:
Q  84 aagcacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagttttt 183  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |  |||||||||||| |||||||||    
T  42202496 aagcacggagccgtgtgttgatgacatagcgaactattctttcgccttttactaaagaataccgtgtcagcgtcacatttagcggcatacgctagttttt 42202397  T
Q  184 gggagagtcctctt 197  Q
    || |||||| ||||    
T  42202396 ggaagagtcttctt 42202383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 42211364 - 42211251
Alignment:
Q  84 aagcacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagttttt 183  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |  |||||||||||| |||||||||    
T  42211364 aagcacggagccgtgtgttgatgacatagcgaactattctttcgccttttactaaagaataccgtgtcagcgtcacatttagcggcatacgctagttttt 42211265  T
Q  184 gggagagtcctctt 197  Q
    || |||||| ||||    
T  42211264 ggaagagtcttctt 42211251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 45151998 - 45152128
Alignment:
Q  92 agccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagt 191  Q
    ||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| || ||  |  |||||||||||| ||||||||||| |||||    
T  45151998 agccgtgtgataatgacatagcgaactattctttcgccttttactaaagaataccgtgtcagtgtcacatttagcggcatacgctagtttttggaagagt 45152097  T
Q  192 cctcttcacagagggctttgcaattttagtt 222  Q
    |||||| || ||||||| |||||| ||||||    
T  45152098 cctctttacggagggctctgcaatattagtt 45152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 45316515 - 45316380
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttggg 186  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| | |||  || ||| ||||||||  ||||||||||     
T  45316515 cacggagccgtgtgatgatgacatagcgaactattctttcgccttttactaaagaataccgtgtcaacgtcacttttaacggcatacgttagtttttgga 45316416  T
Q  187 agagtcctcttcacagagggctttgcaattttagtt 222  Q
    |||| |||||| |  ||||||| |||||| ||||||    
T  45316415 agagccctcttaattgagggctctgcaatattagtt 45316380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 83 - 192
Target Start/End: Complemental strand, 2176424 - 2176315
Alignment:
Q  83 aaagcacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttt 182  Q
    |||||||| || |||||| | || |||||||||||||||||||||||||||||||||||||||||||| || ||  |  |||||||||||| ||||||||    
T  2176424 aaagcacggagacgtgtgataatgacatagcgaactattctttcgccttttactaaagaataccgtgtcagtgtcacatttagcggcatacgctagtttt 2176325  T
Q  183 tgggagagtc 192  Q
    ||| ||||||    
T  2176324 tggaagagtc 2176315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 42409594 - 42409704
Alignment:
Q  84 aagcacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagttttt 183  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |  ||| || |||||  ||||||||    
T  42409594 aagcacggagctgtgtgatgatgacatagcgaactattctttcgccttttactaaagaataccgtgtcagcgtcacatttaacgacatacgttagttttt 42409693  T
Q  184 gggagagtcct 194  Q
    || ||||||||    
T  42409694 ggaagagtcct 42409704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 43014430 - 43014361
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgt 156  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43014430 cacggagccgtgtgatgagcacatagcgaactattctttcgccttttactaaagaataccgtgtgtgcgt 43014361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 42217331 - 42217251
Alignment:
Q  92 agccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcata 172  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||| || || ||  |||||||||||    
T  42217331 agccgtgtgatgacgacatagcgaactattctttcgccttttactaaagaatactgtgtcagggtcgcatttagcggcata 42217251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 42417640 - 42417700
Alignment:
Q  86 gcacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaatacc 146  Q
    ||||| ||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  42417640 gcacggagctgtgtgatgatgacatagcgaattattctttcgccttttactaaagaatacc 42417700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 51795024 - 51795127
Alignment:
Q  94 ccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcc 193  Q
    ||||||| |||| ||||||| ||||||| |||||||||||||||||||||| ||| | | |||  |  || ||||||||  ||||||||||| ||||||     
T  51795024 ccgtgtgatgatgacatagcaaactattgtttcgccttttactaaagaatagcgtatcaacgtcacattttgcggcatatgctagtttttggaagagtca 51795123  T
Q  194 tctt 197  Q
    ||||    
T  51795124 tctt 51795127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 31555233 - 31555089
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttggg 186  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| |||||||||||     
T  31555233 cacggagccgtgtgatgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattagcggcatacgctagtttttgga 31555134  T
Q  187 agagtcctcttcacagagggctttgcaattttagttcaatatttt 231  Q
    |||||| |||| |  ||||||| |||||| |||||| ||| ||||    
T  31555133 agagtcttctttattgagggctctgcaatattagtttaatttttt 31555089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 31878236 - 31878380
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttggg 186  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| |||||||||||     
T  31878236 cacggagccgtgtgatgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattagcggcatacgctagtttttgga 31878335  T
Q  187 agagtcctcttcacagagggctttgcaattttagttcaatatttt 231  Q
    |||||| |||| |  ||||||| |||||| |||||| ||| ||||    
T  31878336 agagtcttctttattgagggctctgcaatattagtttaatttttt 31878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 31558396 - 31558209
Alignment:
Q  9 aaagtccaacatcgaccaattcataaactaaactatgcagctcacatataaattgacagcacctctacctccttaaagcacgaagccgtgtgttgatcac 108  Q
    ||||||| |||||| ||||| |||||||  ||| | || |||  |||||||| ||| ||||| |||||||  |  ||||| | ||||||||| |||||||    
T  31558396 aaagtcccacatcggccaatgcataaacccaaccaagctgcttgcatataaactgaaagcacttctaccttttataagcatggagccgtgtgatgatcac 31558297  T
Q  109 atagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctct 196  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||  |||||||| | ||||||||||    
T  31558296 atagcgaactattctttcgccttttactaaagaataccgtgtgaacgtcacaattagcggcatacgttagtttttagaagagtcctct 31558209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 13568476 - 13568429
Alignment:
Q  94 ccgtgtgttgatcacatagcgaactattctttcgccttttactaaaga 141  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  13568476 ccgtgtgataatcacatagcgaactattctttcgccttttactaaaga 13568429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 4042303 - 4042245
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaatac 145  Q
    |||| ||||||||| ||| | || ||| |||||||||||||||||| ||||||||||||    
T  4042303 cacgcagccgtgtgatgagctcaaagcaaactattctttcgcctttgactaaagaatac 4042245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 3647026 - 3647170
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttggg 186  Q
    |||| ||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||      
T  3647026 cacggagccgtgtgatgatgacatagcaaactattctttcgccttttactaaagaataccgtgtcagcgtcactattagcggcatacactagtttttgaa 3647125  T
Q  187 agagtcctcttcacagagggctttgcaattttagttcaatatttt 231  Q
    || |||||||| |  ||||||| |||||| ||||| |||| ||||    
T  3647126 agggtcctctttattgagggctctgcaatgttagtgcaatgtttt 3647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 3649484 - 3649619
Alignment:
Q  96 gtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctc 195  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |  | |||| |||||||  ||||||||||| || ||||||    
T  3649484 gtgtgatgatgacatagcgaactattctttcgccttttactaaagaataccgtgttagcatcacaattatcggcatatgctagtttttggaagggtcctc 3649583  T
Q  196 ttcacagagggctttgcaattttagttcaatatttt 231  Q
    || |  ||||||| |||||| |||||||||| ||||    
T  3649584 ttaattgagggctctgcaatattagttcaatttttt 3649619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 3657601 - 3657736
Alignment:
Q  96 gtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagtcctc 195  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||  | | ||||||||||||||||||||||| ||  || ||    
T  3657601 gtgtgatgatgacatagcgaactattctttcgccttttactaaagaataccgtgtcagcgtcacaaatagcggcatacactagtttttggaaggatcatc 3657700  T
Q  196 ttcacagagggctttgcaattttagttcaatatttt 231  Q
    || |  |||| || |||||| |||||||||| ||||    
T  3657701 tttatcgaggactctgcaatattagttcaatttttt 3657736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 3641211 - 3641264
Alignment:
Q  92 agccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaatac 145  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  3641211 agccgtgtgatgatgacatagcgaactattctttcgccttttactaaagaatac 3641264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 19523330 - 19523283
Alignment:
Q  104 atcacatagcgaactattctttcgccttttactaaagaataccgtgtg 151  Q
    |||||| ||||||  ||||||||||||||||||||||||| |||||||    
T  19523330 atcacagagcgaataattctttcgccttttactaaagaattccgtgtg 19523283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 9e-28; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 87 - 226
Target Start/End: Complemental strand, 21884160 - 21884021
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttggg 186  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  ||   ||||||||||  || ||||||      
T  21884160 cacggagccgtgtgatgagcacatagcgaactattctttcgccttttactaaagaataccgtgtgcgcgtcacttaaagcggcatacgttaatttttgaa 21884061  T
Q  187 agagtcctcttcacagagggctttgcaattttagttcaat 226  Q
    |||||||| ||||| ||||||| |||||| | ||||||||    
T  21884060 agagtccttttcaccgagggctctgcaatataagttcaat 21884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 46446219 - 46446324
Alignment:
Q  92 agccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttgggagagt 191  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||| |||||    
T  46446219 agccttgtgatgatgacatagcgaactattctttcgccttttactaaagaataccgtgtcagcgttactatttttggcatacgctagtttttggaagagt 46446318  T
Q  192 cctctt 197  Q
    | ||||    
T  46446319 cttctt 46446324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 35717304 - 35717255
Alignment:
Q  90 gaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaa 139  Q
    ||||||||||| ||| |||||||| ||||||| ||||| |||||||||||    
T  35717304 gaagccgtgtgatgagcacatagcaaactattatttcgtcttttactaaa 35717255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 25698804 - 25698918
Alignment:
Q  83 aaagcacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttt 182  Q
    |||||||| ||| ||||| ||||||||||| | ||||||||||||||||||| |||||||||||||||||||||    ||||||||||||| ||||||||    
T  25698804 aaagcacggagctgtgtgatgatcacatagtggactattctttcgccttttattaaagaataccgtgtgagcgtcataattagcggcatacgctagtttt 25698903  T
Q  183 tgggagagtcctctt 197  Q
    ||| ||| |||||||    
T  25698904 tggaagaatcctctt 25698918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 17889422 - 17889566
Alignment:
Q  87 cacgaagccgtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattagcggcatacactagtttttggg 186  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||  |||  |||||||||| ||| ||||||      
T  17889422 cacggagccgtgtgatgagcacatagcgaactattctttcgccttttactaaagaataccgtgtgcacgtcactaaaagcggcatacgctaatttttgaa 17889521  T
Q  187 agagtcctcttcacagagggctttgcaattttagttcaatatttt 231  Q
    ||||||||| | |  ||||| | |||||| |||||| ||||||||    
T  17889522 agagtcctccttaatgagggttctgcaatattagtttaatatttt 17889566  T

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Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 36790854 - 36790904
Alignment:
Q  106 cacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgt 156  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36790854 cacaaagcgaactattctttcgccttttactaaagaataccgtgtgagcgt 36790904  T

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Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 49588239 - 49588194
Alignment:
Q  106 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 151  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  49588239 cacaaagcgaactattctttcgccttttactaaagaataccgtgtg 49588194  T

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Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 20918685 - 20918725
Alignment:
Q  101 ttgatcacatagcgaactattctttcgccttttactaaaga 141  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  20918685 ttgatcacatagcaaactattctttcgccttttactaaaga 20918725  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 46362588 - 46362544
Alignment:
Q  102 tgatcacatagcgaactattctttcgccttttactaaagaatacc 146  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||    
T  46362588 tgatgacatagcgaactattatttcgctttttactaaagaatacc 46362544  T

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Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 33891611 - 33891656
Alignment:
Q  106 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33891611 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 33891656  T

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Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 26568347 - 26568407
Alignment:
Q  96 gtgtgttgatcacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgt 156  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26568347 gtgtgatgagcacatagcgaactattcttttgccttttactaaagaataccgtgtgcgcgt 26568407  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 5900544 - 5900589
Alignment:
Q  106 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 151  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  5900544 cacaaagcgaactattctttcgccttttactaaagaataccgtgtg 5900589  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 151
Target Start/End: Complemental strand, 43633480 - 43633443
Alignment:
Q  114 gaactattctttcgccttttactaaagaataccgtgtg 151  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43633480 gaactattctttcgccttttactaaagaataccgtgtg 43633443  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 2341374 - 2341338
Alignment:
Q  106 cacatagcgaactattctttcgccttttactaaagaa 142  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  2341374 cacaaagcgaactattctttcgccttttacaaaagaa 2341338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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