View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1510_high_19 (Length: 327)
Name: NF1510_high_19
Description: NF1510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1510_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 322
Target Start/End: Original strand, 26037039 - 26037342
Alignment:
| Q |
19 |
taaacgctccacagcttgtctcactaataactcagatttactatccaacgcagaagttgcttcgtccagaatcaatatagaagaattttgatagaaagcc |
118 |
Q |
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| T |
26037039 |
taaacgctccacagcttgtctcactaataactcagatttactatccaacgcagaagttgcttcgtccagaatcaatatagaagaattttgatagaaagcc |
26037138 |
T |
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| Q |
119 |
cttgcaatagccagtctgtaagtttgagaaaggaagtaacatatcaaatttgaatgatatttcataaatattcaaaacattaaatctgttcttcacatca |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
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| T |
26037139 |
cttgcaatagccagtctgtaagtttgagaaaggaagtaacatatcaaatttgaatgatatttcataaatattcaaaacattaaatttgtccttcacatca |
26037238 |
T |
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| Q |
219 |
atcatagctaccaaaagctctttccaaacagaacaaaattagctgttaattcatggtttatagaacagaatgaaatttgaatttgaaaatttacctttgc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26037239 |
atcatagctaccaaaagctctttccaaacagaacaaaattagctgttaattcatggtttatagaacagaatgaaatttgaatttgaaaatttacctttgc |
26037338 |
T |
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| Q |
319 |
ttct |
322 |
Q |
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|||| |
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| T |
26037339 |
ttct |
26037342 |
T |
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