View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1510_high_6 (Length: 490)
Name: NF1510_high_6
Description: NF1510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1510_high_6 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 319 - 474
Target Start/End: Original strand, 4856091 - 4856246
Alignment:
| Q |
319 |
aatataagtgtgtatgtgtgagagagagcgcgtccatgtgtacgcataacgctaaaaattaatataattatttccctcaaaaattaaaatttctaggttt |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
4856091 |
aatataagtgtgtatgtgtgagagagagcgcgtccatgtgtgcgcataacgctacaaattaatataattgtttcccacaaaaattaaaatttctaggttt |
4856190 |
T |
 |
| Q |
419 |
gttattgtttaatacagtaaacatatatgtgtatcattagtaaacaagggacatat |
474 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4856191 |
gttattgtttaatacaggaaacatatatgtgtatcattagtaaacaagggacatat |
4856246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 4854255 - 4854400
Alignment:
| Q |
13 |
atactaactgtcattacataaatatgttctaactattttctaaccataactaatatacttgcacagtttccaatattatcttgctggtttttccatcaca |
112 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
4854255 |
atactaattgtcattacataaatatgttctaactattttctaaccataactaatatacttgcacagtttccaatattaccttgctgg-ttttccatcaca |
4854353 |
T |
 |
| Q |
113 |
caatcaattatactaacaagagtttaaaggcatacacacaaaaataa |
159 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4854354 |
caatcaattatactaacaagagtttaaacgcatacacacaaaaataa |
4854400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 158 - 310
Target Start/End: Complemental strand, 9388714 - 9388561
Alignment:
| Q |
158 |
aagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaa |
256 |
Q |
| |
|
|||| ||||||||||| ||| |||||||||||||||||||||||||||| | |||||||||||| |||| ||||| |||||| |||||||| ||||| |
|
|
| T |
9388714 |
aagaactatgttatttgtacctctaaaattgaacaaccaatgcaacaacctctaattttgtgaggagcacataaatcgaaatcagacaaaatatcattaa |
9388615 |
T |
 |
| Q |
257 |
aaatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
9388614 |
aaatagtaaataagttgttggttgtacaatttaattgttcacatatcattcctc |
9388561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 196 - 310
Target Start/End: Complemental strand, 10366681 - 10366566
Alignment:
| Q |
196 |
aatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttgtacaatttggttgt |
294 |
Q |
| |
|
||||||||||| ||||| ||| |||| |||| ||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
10366681 |
aatgcaacaacctttaactttatgaggagcacataaatcgaaatcaaataaaatatcattaaaaataacaaataagttgttggttgtacaatttgattgt |
10366582 |
T |
 |
| Q |
295 |
tcacgtatcattcctc |
310 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
10366581 |
tcacgtatcattcctc |
10366566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 52548025 - 52547962
Alignment:
| Q |
243 |
caaaatattattaaaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcatt |
306 |
Q |
| |
|
|||||||| ||| ||||| ||| |||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
52548025 |
caaaatatatttataaatataaaacaagttgttcgttgtacaaattggttgttcacgtatcatt |
52547962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 125; Significance: 4e-64; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 159 - 310
Target Start/End: Complemental strand, 901038 - 900886
Alignment:
| Q |
159 |
agagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaa |
257 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| |
|
|
| T |
901038 |
agagctatgttatttgtacatctaaaattggacaaccaatgcaacaacttttaattttgtgaggagcatggaaaacaaaatcatgcaaaatatcattaaa |
900939 |
T |
 |
| Q |
258 |
aatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
900938 |
aatagcaaataagttgttggttgtacaatttggttgttcacatatcattcctc |
900886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 160 - 311
Target Start/End: Complemental strand, 2250478 - 2250326
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaa |
258 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||||| || ||||||||||||||| || | |||||||||||||||||||||||| ||||||| |
|
|
| T |
2250478 |
gagctatgttatttgtatatctaaaattggataaccaatgcaataatttttaattttgtgaggagtacggaaatcaaaatcatgcaaaatatcattaaaa |
2250379 |
T |
 |
| Q |
259 |
atagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctca |
311 |
Q |
| |
|
||| |||||| |||||| |||||||||||| || ||||| |||||||||||| |
|
|
| T |
2250378 |
ataataaataaattgttgattgtacaatttgattcttcacatatcattcctca |
2250326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 15434564 - 15434413
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaa |
258 |
Q |
| |
|
||||| |||||||| ||||||||||| || |||| |||| |||||| ||||| ||| |||| |||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
15434564 |
gagctgtgttatttgtacatctaaaagtggacaattaatggaacaacctttaactttatgaggagcacagaaatcaaaatcaagcaaaatatcattaaaa |
15434465 |
T |
 |
| Q |
259 |
atagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
15434464 |
gtagcaaataagttgttggttgtacaatttggttgttcacatatcattcctc |
15434413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 30840064 - 30839962
Alignment:
| Q |
158 |
aagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaa |
256 |
Q |
| |
|
||||||||| |||||| ||||| |||||||| |||| ||||| |||||| ||||| |||||||| || | |||||| |||||| ||||||||||||||| |
|
|
| T |
30840064 |
aagagctatattatttgtacatataaaattggacaatcaatggaacaacctttaactttgtgaggagtacagaaatcgaaatcaagcaaaatattattaa |
30839965 |
T |
 |
| Q |
257 |
aaa |
259 |
Q |
| |
|
||| |
|
|
| T |
30839964 |
aaa |
30839962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 30839779 - 30839720
Alignment:
| Q |
251 |
tattaaaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
||||||||||||||| ||| |||||||| ||||||||| ||||||||| ||||||||||| |
|
|
| T |
30839779 |
tattaaaaatagcaagtaaattgttggtcgtacaatttagttgttcacatatcattcctc |
30839720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 33699997 - 33700099
Alignment:
| Q |
182 |
aaaattgaacaaccaatgcaacaacttttaattttgtgaga-gcatggaaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttg |
280 |
Q |
| |
|
||||||||||||| ||||||||| | ||| || ||||||| ||| | ||||||||||||| ||||||| | |||||| ||||| |||||||||||| |
|
|
| T |
33699997 |
aaaattgaacaactaatgcaacaccctttgataatgtgagaagcacgcaaatcaaaatcattaaaaatatattaaaaaattgcaaaagagttgttggttg |
33700096 |
T |
 |
| Q |
281 |
tac |
283 |
Q |
| |
|
||| |
|
|
| T |
33700097 |
tac |
33700099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 8317392 - 8317448
Alignment:
| Q |
229 |
aaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttgtacaa |
285 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||| |||||||||||||||||| |
|
|
| T |
8317392 |
aaatcaaaatcagtaaaaatatattaaaaaatagcaaaaaagttgttggttgtacaa |
8317448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 6494897 - 6494742
Alignment:
| Q |
158 |
aagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaa |
256 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
6494897 |
aagagctatgttatttgtacatctaaaattggacaaccaatgcaacaacttttaattttgtgaagagcacggaaaacaaaatcatgcaaaatatcattaa |
6494798 |
T |
 |
| Q |
257 |
aaatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctcaa |
312 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
6494797 |
aaatagcaaataagttattgattgtacaattttgttgttcacatatcattcctcaa |
6494742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 159 - 310
Target Start/End: Complemental strand, 38174773 - 38174621
Alignment:
| Q |
159 |
agagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaa |
257 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||| |||| |||||| |||||| |||||||||||||||| |
|
|
| T |
38174773 |
agagctatgttatttgtacatctaaaattggacaaccaatgcaacaacctttaactttgtgaggagcacagaaatcgaaatcaagcaaaatattattaaa |
38174674 |
T |
 |
| Q |
258 |
aatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
|||| ||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38174673 |
aatatcaagtaagttattggttgtacaatttggttgttcacgtatcattcctc |
38174621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 158 - 310
Target Start/End: Original strand, 45849426 - 45849580
Alignment:
| Q |
158 |
aagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatc-aaaatcatgcaaaatattatta |
255 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| |||| |||| ||||||| |||||||||||||| |
|
|
| T |
45849426 |
aagagctatgttatttgtacatctaaaatttgacaatcaatgcaacaacttttaatgttgtgaggagcacataaattgaaaatcaagcaaaatattatta |
45849525 |
T |
 |
| Q |
256 |
aaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45849526 |
aaaatagcaaataaattattggttgtacaatttggttgttcacgtatcattcctc |
45849580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 22609930 - 22609829
Alignment:
| Q |
182 |
aaaattgaacaaccaatgcaacaacttttaattttgtgaga-gcatggaaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttg |
280 |
Q |
| |
|
||||||||||||| ||||||||| | ||| || ||||||| ||| | ||||||||||||| ||||||| |||||||| ||||| |||||||| ||| |
|
|
| T |
22609930 |
aaaattgaacaactaatgcaacaccctttgataatgtgagaagcacgcaaatcaaaatcattaaaaatatatttaaaaattgcaaaagagttgttgattg |
22609831 |
T |
 |
| Q |
281 |
ta |
282 |
Q |
| |
|
|| |
|
|
| T |
22609830 |
ta |
22609829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 44732493 - 44732537
Alignment:
| Q |
253 |
ttaaaaatagcaaataagttgttggttgtacaatttggttgttca |
297 |
Q |
| |
|
||||||||| |||||||||| |||||||||||| ||| ||||||| |
|
|
| T |
44732493 |
ttaaaaataacaaataagttattggttgtacaaattgattgttca |
44732537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 157 - 311
Target Start/End: Original strand, 26847674 - 26847829
Alignment:
| Q |
157 |
taagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattatta |
255 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||| |||| |
|
|
| T |
26847674 |
taagagctatgttatttgtacatctaaaattagacaaccaatgcaataacttttaattttgtgaggagcacggaaaacaaaatcatgcaaaatatcatta |
26847773 |
T |
 |
| Q |
256 |
aaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctca |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
26847774 |
aaaatagcaaataagttgttggttgtacaatttgattgttcacatatcattcctca |
26847829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 163 - 306
Target Start/End: Complemental strand, 40034876 - 40034732
Alignment:
| Q |
163 |
ctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaata |
261 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| |||| |||| |||||| ||||||||| |||||||||||||||||| |
|
|
| T |
40034876 |
ctatgttatttgtacatttaaaattggacaaccaatgcaacaacttttaattttatgaggagcacggaaattaaaatcatgtaaaatattattaaaaata |
40034777 |
T |
 |
| Q |
262 |
gcaaataagttgttggttgtacaatttggttgttcacgtatcatt |
306 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
40034776 |
ataaataagttgttggttgtacaatttgaatgttcacatatcatt |
40034732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 175 - 310
Target Start/End: Complemental strand, 2043870 - 2043732
Alignment:
| Q |
175 |
tacatctaaaattgaacaaccaatgcaaca--acttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaatagcaaataagt |
271 |
Q |
| |
|
|||||||||||||| |||| |||||||||| |||||||| ||||| || |||| ||||| |||||| |||||||| |||||| ||||||||||||| |
|
|
| T |
2043870 |
tacatctaaaattggacaatcaatgcaacacaacttttaactttgtaaggagcacataaatcgaaatcaatcaaaatatcattaaagatagcaaataagt |
2043771 |
T |
 |
| Q |
272 |
tgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
||||||||||||||||| ||| || || ||||||||||| |
|
|
| T |
2043770 |
tgttggttgtacaatttagttatttacatatcattcctc |
2043732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 30075021 - 30074962
Alignment:
| Q |
158 |
aagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttg |
217 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30075021 |
aagagctatgttatttgtacatctaaaattggacaaccaatgcaacaacttttaattttg |
30074962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 8914002 - 8913946
Alignment:
| Q |
165 |
atgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag |
221 |
Q |
| |
|
||||||||| |||| ||||||||||||| ||||||||||| |||||| ||||||| |
|
|
| T |
8914002 |
atgttatttgtacaatcaaaattgaacaactaatgcaacaacctttaatattgtgag |
8913946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 33152453 - 33152575
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaaaa |
258 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
33152453 |
gagctatgttatttgtacatctaaaattggacaaccaatgcaacaacttttaattttgtgaggagcacggaaatcaaaatcatgcaaaatatcattaaaa |
33152552 |
T |
 |
| Q |
259 |
atagcaaataagttgttggttgt |
281 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
33152553 |
atagcaaataagttgttggttgt |
33152575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 3684885 - 3684733
Alignment:
| Q |
158 |
aagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaa |
256 |
Q |
| |
|
|||||||||||||| | |||||||||||||| | || |||||||||||| ||||| |||||||| |||| ||||| |||||| |||||||||||||| |
|
|
| T |
3684885 |
aagagctatgttatatgtacatctaaaattggataatcaatgcaacaacctttaactttgtgaggagcacaaaaatcgaaatcagacaaaatattattaa |
3684786 |
T |
 |
| Q |
257 |
aaatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcct |
309 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||||||||| ||| |||||| |
|
|
| T |
3684785 |
aaatagcaaatatattgttggttttacaatttagttgttcacatattattcct |
3684733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 2728695 - 2728600
Alignment:
| Q |
158 |
aagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatatta |
252 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||| ||||| ||||| |||||| ||||||||||| |
|
|
| T |
2728695 |
aagagctatgttatttgtacatttaaaattggacaaccaatgcaacaacctttaactttgtgaggagcacataaatcgaaatcaagcaaaatatta |
2728600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 2728315 - 2728255
Alignment:
| Q |
251 |
tattaaaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctca |
311 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||| |
|
|
| T |
2728315 |
tattaaaaatagcaagtaagttgttggttgtataatttagttgttcacatatcattcctca |
2728255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 12842431 - 12842304
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaa |
258 |
Q |
| |
|
|||| ||||||||| |||| | |||||| |||||| ||| ||||||| |||||| ||||||| | |||| |||||||||||| |||| | |||||||| |
|
|
| T |
12842431 |
gagcaatgttatttgtacaaccaaaattcaacaactaatacaacaacctttaatattgtgaggaacatgcaaatcaaaatcactaaaaaaaatattaaaa |
12842332 |
T |
 |
| Q |
259 |
a-tagcaaataagttgttggttgtacaa |
285 |
Q |
| |
|
| ||||||| |||||||||||||||||| |
|
|
| T |
12842331 |
aatagcaaagaagttgttggttgtacaa |
12842304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 2933707 - 2933581
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaaaa |
258 |
Q |
| |
|
|||| ||||||||| |||| | ||||||||||||| |||| ||||| ||||||| |||||| |||| | |||||||||||| |||| || | |||| |
|
|
| T |
2933707 |
gagcaatgttatttgtacaaccaaaattgaacaactaatgtaacaatttttaatattgtgaggagcgcgcaaatcaaaatcactaaaaaaatattaaaaa |
2933608 |
T |
 |
| Q |
259 |
atagcaaataagttgttggttgtacaa |
285 |
Q |
| |
|
|||| ||| ||||||||||||||||| |
|
|
| T |
2933607 |
atagtaaaatagttgttggttgtacaa |
2933581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 4734112 - 4734241
Alignment:
| Q |
157 |
taagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattatt- |
254 |
Q |
| |
|
||||||| ||||||||| || | |||||||||||| ||||||||||||||||| |||||| ||||| | ||||||||||| |||| | |||| |
|
|
| T |
4734112 |
taagagcaatgttatttgtataatcaaaattgaacaatttatgcaacaacttttaatattgtgaggagcacgccaatcaaaatca-ctaaaagaatatta |
4734210 |
T |
 |
| Q |
255 |
aaaaatagcaaataagttgttggttgtacaa |
285 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |
|
|
| T |
4734211 |
aaaaatagcaaaatagttgttggttgtacaa |
4734241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 48150609 - 48150577
Alignment:
| Q |
253 |
ttaaaaatagcaaataagttgttggttgtacaa |
285 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
48150609 |
ttaaaaatagcaaataagttgtcggttgtacaa |
48150577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 33538327 - 33538176
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaa |
258 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||||||||||| || ||||||||||||||| || | |||||||||||||||||||||||| ||||||| |
|
|
| T |
33538327 |
gagctatgttatttgtacatttaaaattggacaaccaatgcaataatttttaattttgtgaggagtacggaaatcaaaatcatgcaaaatatcattaaaa |
33538228 |
T |
 |
| Q |
259 |
atagcaaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
33538227 |
atagtaaataagttgttggttgtacaatttgatttttcacatatcattcctc |
33538176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 40611646 - 40611590
Alignment:
| Q |
229 |
aaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttgtacaa |
285 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||| |||||||||||||||||| |
|
|
| T |
40611646 |
aaatcaaaatcaataaaaatatattaaaaaatagcaaaaaagttgttggttgtacaa |
40611590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 164 - 310
Target Start/End: Complemental strand, 29396592 - 29396445
Alignment:
| Q |
164 |
tatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaatag |
262 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||| |||| ||||| |||||| |||||||| ||||||||||| |
|
|
| T |
29396592 |
tatgttatttgtacatctaaaattggacaaccaatgcaacaacctttaactttgtgaggagcacaaaaatcgaaatcaatcaaaatatcattaaaaatag |
29396493 |
T |
 |
| Q |
263 |
caaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
29396492 |
caaataagttgttggttgtacaatttggctgttcacatatcattcctc |
29396445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 161 - 304
Target Start/End: Complemental strand, 22996123 - 22995981
Alignment:
| Q |
161 |
agctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaaaaa |
259 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||| ||||| ||||| |||||| |||||||||||||||||| |
|
|
| T |
22996123 |
agctatgttatttgtacatctaaaattggacaaccaatgtaacaacctttaactttgtgaggagcacataaatcgaaatcaggcaaaatattattaaaaa |
22996024 |
T |
 |
| Q |
260 |
tagcaaataagttgttggttgtacaatttggttgttcacgtatca |
304 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
22996023 |
tagcaa--aagttgttggttatacaatttggttgttcacatatca |
22995981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 161 - 304
Target Start/End: Original strand, 23792277 - 23792419
Alignment:
| Q |
161 |
agctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaaaaa |
259 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||| ||||| ||||| |||||| |||||||||||||||||| |
|
|
| T |
23792277 |
agctatgttatttgtacatctaaaattggacaaccaatgtaacaacctttaactttgtgaggagcacataaatcgaaatcaggcaaaatattattaaaaa |
23792376 |
T |
 |
| Q |
260 |
tagcaaataagttgttggttgtacaatttggttgttcacgtatca |
304 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
23792377 |
tagcaa--aagttgttggttatacaatttggttgttcacatatca |
23792419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 18141530 - 18141382
Alignment:
| Q |
164 |
tatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaatag |
262 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||| ||||||| ||||| |||||||| || | ||||| |||||| | ||||||||||||||||||| |
|
|
| T |
18141530 |
tatgttatttgtacatttaaaattggacaaccaatacaacaacctttaactttgtgaggagtacataaatcgaaatcaagtaaaatattattaaaaatag |
18141431 |
T |
 |
| Q |
263 |
caaataagttgttggttgtacaatttggttgttcacgtatcattcctca |
311 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
18141430 |
aaaataagttgctggttgtacgatttggttgttcacatatcattcctca |
18141382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 21203236 - 21203381
Alignment:
| Q |
168 |
ttatttatacatctaaaattgaacaaccaatgcaacaacttttaatttt------gtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaat |
260 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||||||||| ||||| ||| || || | ||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
21203236 |
ttatttgtacatttaaaattggacaaccaatgcaacaacctttaactttaactttgtaaggatcatagaaatcaaaatcaagcaaaacattattaaaaat |
21203335 |
T |
 |
| Q |
261 |
agcaaataagttgttggttgtacaatttggttgttcacgtatcatt |
306 |
Q |
| |
|
| ||| |||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
21203336 |
atcaagtaagttgttgattgtacaatttggttgttcacatatcatt |
21203381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 22957083 - 22956978
Alignment:
| Q |
208 |
tttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcatt |
306 |
Q |
| |
|
|||||||||||||| |||| ||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
22957083 |
tttaattttgtgaggagcacataaatcgaaatcaagtaaaatattattaaaaatagcaagtaagttgttggttgtacaatttggttatttacatatcatt |
22956984 |
T |
 |
| Q |
307 |
cctcaa |
312 |
Q |
| |
|
||||| |
|
|
| T |
22956983 |
tctcaa |
22956978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 23831309 - 23831414
Alignment:
| Q |
208 |
tttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcatt |
306 |
Q |
| |
|
|||||||||||||| |||| ||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
23831309 |
tttaattttgtgaggagcacataaatcgaaatcaagtaaaatattattaaaaatagcaagtaagttgttggttgtacaatttggttatttacatatcatt |
23831408 |
T |
 |
| Q |
307 |
cctcaa |
312 |
Q |
| |
|
||||| |
|
|
| T |
23831409 |
tctcaa |
23831414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 7045131 - 7045254
Alignment:
| Q |
159 |
agagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaaa |
257 |
Q |
| |
|
||||||||||||| | |||| |||||||| ||||||||||||||||||| ||| ||||||| ||||| ||||||||| ||| |||||||| ||||| |
|
|
| T |
7045131 |
agagctatgttatgtgtacaactaaaatttgacaaccaatgcaacaacttataagtttgtgaggagcacagaaatcaaattcaaacaaaatatatttaaa |
7045230 |
T |
 |
| Q |
258 |
aatagcaaataagttgttggttgt |
281 |
Q |
| |
|
||||| |||| | ||||||||||| |
|
|
| T |
7045231 |
aatagtaaatgaattgttggttgt |
7045254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 310
Target Start/End: Original strand, 9961152 - 9961297
Alignment:
| Q |
166 |
tgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgaga-gcatggaaatcaaaatcatgcaaaatattattaaaaatagca |
264 |
Q |
| |
|
|||||||| |||| |||||||||||||| |||| |||| | | ||| |||||||| ||| | ||||| |||||| ||||| || | |||||||||| |
|
|
| T |
9961152 |
tgttatttgtacaactaaaattgaacaattaatgtaacaccatataacattgtgagaagcacgtaaatcgaaatcaatcaaaaaatattaaaaaatagca |
9961251 |
T |
 |
| Q |
265 |
aataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
||||||||||||||||||||| | ||||||| ||||||||||| |
|
|
| T |
9961252 |
aataagttgttggttgtacaaacgagatgttcacatatcattcctc |
9961297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 6266426 - 6266549
Alignment:
| Q |
159 |
agagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaaa |
257 |
Q |
| |
|
||||| ||||||||| |||| ||||||||||||||| || ||||||| |||||| |||||| ||||| | ||||| |||||| |||| || | ||| |
|
|
| T |
6266426 |
agagcaatgttatttgtacaactaaaattgaacaacttatacaacaacctttaatattgtgaggagcacgcaaatcgaaatcactaaaaaaatattaaaa |
6266525 |
T |
 |
| Q |
258 |
aatagcaaataagttgttggttgt |
281 |
Q |
| |
|
||||||||| ||||||||||||| |
|
|
| T |
6266526 |
aatagcaaaatagttgttggttgt |
6266549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 284
Target Start/End: Complemental strand, 33029769 - 33029650
Alignment:
| Q |
166 |
tgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattattaaaa-atagc |
263 |
Q |
| |
|
||||||||||||| | ||||||| ||||| || |||||| | | ||| |||||| ||||||| ||||| |||||| ||||| || ||||||| ||||| |
|
|
| T |
33029769 |
tgttatttatacaaccaaaattggacaactaacgcaacaccatataacattgtgatgagcatgtaaatcgaaatcaatcaaaaaat-attaaaacatagc |
33029671 |
T |
 |
| Q |
264 |
aaataagttgttggttgtaca |
284 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
33029670 |
agataagttgttggttgtaca |
33029650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 34576144 - 34576271
Alignment:
| Q |
156 |
ataagagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattatt |
254 |
Q |
| |
|
||||||| | |||||| |||||| ||||||||||||| ||||||||| ||||| || |||||| |||| | ||||||||||||| ||||||| | |
|
|
| T |
34576144 |
ataagagttgtgttatatatacaatcaaaattgaacaactaatgcaacaccttttgataatgtgagaagcacgcaaatcaaaatcattaaaaatatatta |
34576243 |
T |
 |
| Q |
255 |
aaaaatagcaaataagttgttggttgta |
282 |
Q |
| |
|
|||||| ||||| ||||||| |||||| |
|
|
| T |
34576244 |
aaaaattgcaaaagagttgttagttgta |
34576271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 33423685 - 33423777
Alignment:
| Q |
190 |
acaaccaatgcaacaacttttaattttgtgag-agcatggaaatcaaaatcatgcaaaatattattaaaaatagcaaataagttgttggttgt |
281 |
Q |
| |
|
||||||||| |||||||| |||||||||||| || ||||||| |||| ||||||||| | ||||||||||| ||||||||||||||| |
|
|
| T |
33423685 |
acaaccaatacaacaactcataattttgtgagtagtgcggaaatcgaaattgggcaaaatatattaaaaaatagcaattaagttgttggttgt |
33423777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 37819894 - 37819956
Alignment:
| Q |
244 |
aaaatattattaaaaatagcaaataagttgttggttgtacaatttggttgttcacgtatcatt |
306 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||| |
|
|
| T |
37819894 |
aaaatattattaaacatagcaaataaattgttggttgtacaatttagttgttcaaatatcatt |
37819956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 284
Target Start/End: Complemental strand, 43899160 - 43899034
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaacaacttttaattttgtga-gagcatggaaatcaaaatcatgcaaaatattatt-aaa |
257 |
Q |
| |
|
|||||||||||||| |||| | ||||||||||||| ||||||||| | |||||| ||| | ||||| | |||||||||||| |||| | |||| ||| |
|
|
| T |
43899160 |
gagctatgttatttgtacaaccaaaattgaacaactaatgcaacaccctttaatactgtaaggagcacgcaaatcaaaatcaataaaaaaaatattaaaa |
43899061 |
T |
 |
| Q |
258 |
aatagcaaataagttgttggttgtaca |
284 |
Q |
| |
|
||||||||| ||||||||||||||||| |
|
|
| T |
43899060 |
aatagcaaagaagttgttggttgtaca |
43899034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 24512022 - 24511976
Alignment:
| Q |
264 |
aaataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24512022 |
aaataagttgttggttgtacaatttggttgttcagatatcattcctc |
24511976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 24512369 - 24512327
Alignment:
| Q |
160 |
gagctatgttatttatacatctaaaattgaacaaccaatgcaa |
202 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
24512369 |
gagctatgttatttgtacatttaaaattggacaaccaatgcaa |
24512327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 36796127 - 36796082
Alignment:
| Q |
263 |
caaataagttgttggttgtacaatttggttgttcacgtatcattcc |
308 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||| ||| ||||| |
|
|
| T |
36796127 |
caaataagttgttggttgtataatttagttgttcacctataattcc |
36796082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 5857526 - 5857570
Alignment:
| Q |
266 |
ataagttgttggttgtacaatttggttgttcacgtatcattcctc |
310 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||| ||| |||||| |
|
|
| T |
5857526 |
ataagttgttggttgtacaaattggttattcacgaatctttcctc |
5857570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University