View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1510_low_36 (Length: 250)
Name: NF1510_low_36
Description: NF1510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1510_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 13849925 - 13850166
Alignment:
| Q |
1 |
tatactcatgaactcaacttttctaaagagaaagacaagagttaagataaaatgaaagcaaattacttcttttttagctatatattttcatataatgtgc |
100 |
Q |
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| T |
13849925 |
tatactcatgaactcatcttttctaaagagaaagacaagagttaagataaaatgaaagcaaattacttcttttttagctatatattttcatataatgtgc |
13850024 |
T |
|
| Q |
101 |
ttattgtactacattttgcattttcaagatatggttttcgaaaatttcaaatcagtcaagtgaccaactctaataaacttgcattccattgttcatattt |
200 |
Q |
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| T |
13850025 |
ttattgtactacattttgcattttcaagatatggttttcgaaaatttcaaatcagtcaagtgaccaactctaataaacttgcattccattgttcatattt |
13850124 |
T |
|
| Q |
201 |
tagtgatgaaatgggaaagtacaaaaatacatgttctgtgct |
242 |
Q |
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| T |
13850125 |
tagtgatgaaatgggaaagtacaaaaataaatgttctatgct |
13850166 |
T |
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