View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1510_low_41 (Length: 234)

Name: NF1510_low_41
Description: NF1510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1510_low_41
NF1510_low_41
[»] chr7 (1 HSPs)
chr7 (201-234)||(39691454-39691487)


Alignment Details
Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 39691487 - 39691454
Alignment:
201 tatgtgttgtctttatttgtatctttctttgacc 234  Q
    ||||||||||||||||||||||||||||||||||    
39691487 tatgtgttgtctttatttgtatctttctttgacc 39691454  T

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