View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15110_high_5 (Length: 336)

Name: NF15110_high_5
Description: NF15110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15110_high_5
NF15110_high_5
[»] scaffold0498 (1 HSPs)
scaffold0498 (1-323)||(2708-3022)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-317)||(5790-6104)
[»] chr5 (19 HSPs)
chr5 (82-215)||(13002551-13002684)
chr5 (82-215)||(13077209-13077342)
chr5 (1-61)||(20237076-20237136)
chr5 (1-62)||(20969626-20969687)
chr5 (81-164)||(18220865-18220948)
chr5 (66-183)||(18476245-18476362)
chr5 (1-61)||(39798582-39798642)
chr5 (1-63)||(23590167-23590229)
chr5 (1-61)||(26251510-26251571)
chr5 (1-58)||(27275887-27275944)
chr5 (1-61)||(18672380-18672440)
chr5 (1-55)||(19749907-19749961)
chr5 (1-61)||(31588682-31588742)
chr5 (1-61)||(4887444-4887505)
chr5 (1-61)||(5430299-5430360)
chr5 (191-288)||(18222025-18222122)
chr5 (1-61)||(26119475-26119536)
chr5 (13-61)||(24547911-24547959)
chr5 (2-62)||(34638905-34638965)
[»] scaffold0758 (1 HSPs)
scaffold0758 (1-61)||(4684-4744)
[»] chr3 (33 HSPs)
chr3 (1-61)||(11514231-11514291)
chr3 (1-61)||(19705811-19705871)
chr3 (1-58)||(13654347-13654404)
chr3 (1-61)||(21317739-21317799)
chr3 (1-61)||(13699740-13699800)
chr3 (1-61)||(15552460-15552520)
chr3 (1-61)||(16793980-16794040)
chr3 (1-61)||(17761790-17761850)
chr3 (1-61)||(19063110-19063170)
chr3 (1-61)||(50722151-50722211)
chr3 (1-61)||(50790638-50790698)
chr3 (1-62)||(3087920-3087981)
chr3 (1-61)||(6252524-6252584)
chr3 (1-61)||(7494708-7494768)
chr3 (1-61)||(15648141-15648201)
chr3 (1-63)||(12409558-12409620)
chr3 (1-61)||(13932337-13932398)
chr3 (1-61)||(6174411-6174471)
chr3 (1-61)||(7477943-7478003)
chr3 (1-59)||(16882732-16882791)
chr3 (1-61)||(6713509-6713568)
chr3 (1-61)||(10852207-10852267)
chr3 (1-61)||(14008027-14008086)
chr3 (1-61)||(19197519-19197578)
chr3 (1-61)||(27851953-27852013)
chr3 (1-61)||(22141185-22141246)
chr3 (1-61)||(24775156-24775217)
chr3 (1-62)||(12968787-12968847)
chr3 (1-62)||(16304863-16304924)
chr3 (1-62)||(17698007-17698067)
chr3 (4-62)||(33583706-33583765)
chr3 (4-62)||(33598326-33598385)
chr3 (1-61)||(14077035-14077095)
[»] chr1 (21 HSPs)
chr1 (3-60)||(21682811-21682868)
chr1 (66-290)||(14526519-14526739)
chr1 (125-214)||(15308505-15308594)
chr1 (1-62)||(16478346-16478407)
chr1 (1-61)||(18129615-18129675)
chr1 (81-164)||(20618043-20618126)
chr1 (1-62)||(18896161-18896221)
chr1 (1-61)||(9347663-9347723)
chr1 (1-61)||(18516773-18516833)
chr1 (1-61)||(16870394-16870455)
chr1 (1-62)||(2268969-2269031)
chr1 (1-61)||(2818940-2819000)
chr1 (1-61)||(20909872-20909931)
chr1 (1-60)||(1090123-1090181)
chr1 (79-230)||(19623577-19623728)
chr1 (1-61)||(25448111-25448172)
chr1 (1-61)||(4249521-4249583)
chr1 (1-61)||(4249845-4249907)
chr1 (1-61)||(4250169-4250231)
chr1 (1-58)||(26279641-26279698)
chr1 (1-61)||(31359701-31359761)
[»] chr7 (22 HSPs)
chr7 (1-61)||(18047575-18047635)
chr7 (1-61)||(18361302-18361362)
chr7 (1-61)||(5035745-5035805)
chr7 (3-62)||(16307396-16307455)
chr7 (1-62)||(14114468-14114529)
chr7 (1-62)||(14424118-14424179)
chr7 (1-61)||(16412457-16412517)
chr7 (66-213)||(4810407-4810553)
chr7 (1-57)||(16307196-16307253)
chr7 (1-59)||(9063844-9063902)
chr7 (1-57)||(11571964-11572020)
chr7 (1-61)||(13172064-13172124)
chr7 (243-287)||(19417775-19417819)
chr7 (1-64)||(7487536-7487598)
chr7 (1-61)||(16111541-16111602)
chr7 (1-61)||(23390688-23390749)
chr7 (66-164)||(7395155-7395253)
chr7 (66-140)||(19416343-19416417)
chr7 (1-62)||(23126324-23126384)
chr7 (1-61)||(24930244-24930306)
chr7 (1-61)||(14304045-14304104)
chr7 (82-214)||(31611813-31611945)
[»] chr6 (25 HSPs)
chr6 (1-61)||(24399091-24399151)
chr6 (1-61)||(31127031-31127091)
chr6 (1-61)||(10704237-10704297)
chr6 (1-62)||(23005691-23005753)
chr6 (1-62)||(23782613-23782675)
chr6 (5-62)||(26186122-26186179)
chr6 (81-163)||(28609182-28609264)
chr6 (1-61)||(24728205-24728266)
chr6 (1-61)||(12348566-12348625)
chr6 (10-62)||(13145519-13145571)
chr6 (1-61)||(15552362-15552422)
chr6 (1-61)||(25596095-25596155)
chr6 (1-59)||(18171672-18171731)
chr6 (1-56)||(23231582-23231637)
chr6 (1-59)||(24718408-24718467)
chr6 (1-62)||(19473247-19473308)
chr6 (11-61)||(21847031-21847081)
chr6 (1-61)||(19626267-19626326)
chr6 (1-61)||(25592969-25593029)
chr6 (1-61)||(7618057-7618118)
chr6 (1-61)||(15955129-15955190)
chr6 (1-61)||(16877657-16877718)
chr6 (1-61)||(17381872-17381933)
chr6 (1-62)||(15477485-15477546)
chr6 (1-61)||(7812444-7812504)
[»] chr4 (19 HSPs)
chr4 (1-61)||(20577666-20577726)
chr4 (66-214)||(8717994-8718142)
chr4 (1-61)||(14356777-14356837)
chr4 (1-61)||(17812014-17812073)
chr4 (1-61)||(21350231-21350291)
chr4 (1-61)||(2652174-2652234)
chr4 (1-61)||(10250266-10250325)
chr4 (13-61)||(14867219-14867267)
chr4 (1-61)||(18776407-18776467)
chr4 (1-61)||(19888751-19888811)
chr4 (81-163)||(10583738-10583820)
chr4 (1-61)||(11901658-11901717)
chr4 (1-61)||(12417223-12417282)
chr4 (82-178)||(17433449-17433545)
chr4 (1-62)||(29121809-29121871)
chr4 (1-61)||(55732229-55732290)
chr4 (1-61)||(13306653-13306713)
chr4 (4-61)||(17787648-17787704)
chr4 (1-61)||(17540860-17540919)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-61)||(7766-7826)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-61)||(32055-32115)
[»] chr8 (17 HSPs)
chr8 (1-61)||(12194309-12194369)
chr8 (1-61)||(12438737-12438797)
chr8 (1-61)||(22711016-22711076)
chr8 (1-63)||(1208341-1208404)
chr8 (1-61)||(23192261-23192321)
chr8 (82-214)||(26280048-26280180)
chr8 (1-49)||(19505141-19505189)
chr8 (66-286)||(11222903-11223123)
chr8 (1-61)||(15335698-15335759)
chr8 (1-61)||(15424763-15424824)
chr8 (1-61)||(15516067-15516128)
chr8 (1-61)||(24551731-24551792)
chr8 (1-30)||(18530443-18530472)
chr8 (1-59)||(45538113-45538172)
chr8 (1-61)||(18773067-18773126)
chr8 (1-61)||(22461282-22461341)
chr8 (1-61)||(23352745-23352804)
[»] scaffold0772 (1 HSPs)
scaffold0772 (2-61)||(501-560)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-62)||(1510-1571)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-62)||(8476-8537)
[»] chr2 (18 HSPs)
chr2 (81-301)||(15582999-15583220)
chr2 (1-61)||(24158261-24158321)
chr2 (1-61)||(19320051-19320111)
chr2 (1-61)||(24844512-24844572)
chr2 (10-61)||(15668229-15668280)
chr2 (1-61)||(19115566-19115625)
chr2 (1-61)||(28711316-28711377)
chr2 (125-180)||(32067456-32067511)
chr2 (1-61)||(38781816-38781877)
chr2 (204-266)||(15077649-15077711)
chr2 (3-61)||(19643337-19643395)
chr2 (1-61)||(21846536-21846597)
chr2 (82-135)||(27728339-27728392)
chr2 (1-61)||(10896053-10896113)
chr2 (1-61)||(18703214-18703273)
chr2 (1-61)||(22683814-22683874)
chr2 (1-61)||(24440361-24440421)
chr2 (1-61)||(25196348-25196408)
[»] scaffold0522 (2 HSPs)
scaffold0522 (1-61)||(3875-3935)
scaffold0522 (1-61)||(11158-11218)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-61)||(10025-10085)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-61)||(8912-8972)
[»] scaffold1050 (1 HSPs)
scaffold1050 (1-62)||(1313-1374)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-61)||(1169-1229)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-61)||(112620-112680)
scaffold0002 (1-61)||(116228-116288)
[»] scaffold0683 (1 HSPs)
scaffold0683 (11-61)||(785-835)
[»] scaffold0043 (2 HSPs)
scaffold0043 (1-62)||(1520-1581)
scaffold0043 (2-60)||(25317-25374)
[»] scaffold0040 (1 HSPs)
scaffold0040 (10-59)||(3642-3691)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-59)||(87337-87396)
[»] scaffold0072 (1 HSPs)
scaffold0072 (66-218)||(36128-36279)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-61)||(269169-269228)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-61)||(8338-8399)
[»] scaffold0606 (1 HSPs)
scaffold0606 (1-61)||(5893-5953)
[»] scaffold0163 (1 HSPs)
scaffold0163 (1-61)||(36365-36427)
[»] scaffold0916 (1 HSPs)
scaffold0916 (1-61)||(2248-2307)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-61)||(30260-30319)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-61)||(59974-60034)


Alignment Details
Target: scaffold0498 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 3022 - 2708
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacacggcacactacattttcggcaaagcattaagaacaaatt 100  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3022 tttaatacattgttattatcaaaacttaaggtaacaatgtaaaacacattttgttccaacacggcacactacattttcagcaaagcattaagaacaaatt 2923  T
Q  101 taaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatttacatatggtcccaacataaaa 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||| |||||||    
T  2922 taaataaaagattatattaattgcataaatcatatacaacaatccagattaagcgtactacatataatcatagatatttacatatagtcccagcataaaa 2823  T
Q  201 gaaagtttagttacacatagaatgcttaacaaataaaataacgttgatagatgttggagattcatcaagaagc-ttgtatccaagcttcctggcccccca 299  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||         |||||||||||||||| |||||||||||||||||||||| |||    
T  2822 gaaagtttagttacacatagaatgcttaactaataaaataatgttgat---------agattcatcaagaagcgttgtatccaagcttcctggccctcca 2732  T
Q  300 atggtgcctcatgttttccaccct 323  Q
    |||||| |||||| |||| |||||    
T  2731 atggtgtctcatgctttctaccct 2708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 5790 - 6104
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacacggcacactacattttcggcaaagcattaagaacaaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| || ||||| ||||||| |  ||||    
T  5790 tttaatatcttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaacacggaacactacattgtcagcaaaccattaaggatgaatt 5889  T
Q  101 taaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatttacatatggtcccaacataaaa 200  Q
    ||||||||||||||    ||||||||||||| |||||||||||||| || || ||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  5890 taaataaaagattagt--aattgcataaatcctatacaacaatccagatgaatagtactacatacaatcatagatatttacatatgatcccagcataaaa 5987  T
Q  201 gaaagtttagttacacatagaatgcttaacaaataaaataacgttgatagatgttggagattcatcaagaagcttgtatccaagcttcctggccccccaa 300  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  5988 gaaagtttggttacacataaaatgcttaactaataaaataacgttgatagatgttggagattcatcaagaagcttgtatccaagcttcctgcccctccaa 6087  T
Q  301 tggtgcctcatgttttc 317  Q
    || || |||||| ||||    
T  6088 tgatgtctcatgctttc 6104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 13002551 - 13002684
Alignment:
Q  82 aaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatttac 181  Q
    |||| |||||||| | |||||||  |||||||||||  | ||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  13002551 aaagtattaagaatatatttaaaccaaagattatattgaatgcataaatcatatacaactagccaaattaagagtaatacatagaatcttagatatttac 13002650  T
Q  182 atatggtcccaacataaaagaaagtttagttaca 215  Q
    || |  ||||||||  ||||||| ||||||||||    
T  13002651 atctaatcccaacacgaaagaaattttagttaca 13002684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 13077209 - 13077342
Alignment:
Q  82 aaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatttac 181  Q
    |||| |||||||| | |||||||  |||||||||||  | ||||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||    
T  13077209 aaagtattaagaatatatttaaaccaaagattatattgaatgcataaatcatatacaactagccaaattaagagtaatacatagaatcttagatatttac 13077308  T
Q  182 atatggtcccaacataaaagaaagtttagttaca 215  Q
    || |  ||||||||  ||||||| ||||||||||    
T  13077309 atctaatcccaacacgaaagaaattttagttaca 13077342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20237136 - 20237076
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20237136 tttaataccttgttatcatcaaaacttaaggtggcaatgttaaacacattttgttccaaca 20237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20969626 - 20969687
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    ||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  20969626 tttaagaccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaacac 20969687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 18220865 - 18220948
Alignment:
Q  81 caaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacata 164  Q
    |||||||||||||| |||||||||  ||| |||||||  | ||||||||||||||||||| | ||||||||||||||| |||||    
T  18220865 caaagcattaagaataaatttaaactaaaaattatattgaatgcataaatcatatacaaccaaccaaattaagagtaccacata 18220948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 18476245 - 18476362
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatat 165  Q
    |||||||||| |||| ||| ||||||||||| |||||||  |||||||||||  | ||| ||||||||||||||| ||| | |||||||| | ||||||     
T  18476245 acactacattgtcggaaaaacattaagaacatatttaaactaaagattatattgaatgcgtaaatcatatacaaccatcaatattaagagcaatacatag 18476344  T
Q  166 aatcatagatatttacat 183  Q
    | || ||| |||||||||    
T  18476345 attcctagctatttacat 18476362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39798642 - 39798582
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||| ||||||||  ||||||||| ||||||||||||||||    
T  39798642 tttaataccttgttatcatcaaaaattaaggtggtaatgttaaatacattttgttccaaca 39798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23590167 - 23590229
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacacg 63  Q
    |||||||| |||||||||||||||||||| |||  | ||||||||| ||||||||||||||||    
T  23590167 tttaataccttgttatcatcaaaacttaaagtggtattgttaaacatattttgttccaacacg 23590229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26251510 - 26251571
Alignment:
Q  1 tttaatacattgttatcatcaaaactt-aaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||| ||||||  | ||||||||||||||||||||||||    
T  26251510 tttaataccttgttatcatcaaaacttaaaggtggtagtgttaaacacattttgttccaaca 26251571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27275944 - 27275887
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttcca 58  Q
    |||||||| |||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  27275944 tttaataccttggaatcatcaaaacataaggtgataatgttaaacacattttgttcca 27275887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18672440 - 18672380
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| || |||||||||||||| |||||| ||||| ||||||||||||| |||||||    
T  18672440 tttaatacttttttatcatcaaaactaaaggtggcaatgctaaacacattttgctccaaca 18672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19749907 - 19749961
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgtt 55  Q
    |||||||| ||||||||||||||||| ||||||  | ||||||||||||||||||    
T  19749907 tttaataccttgttatcatcaaaactcaaggtggtattgttaaacacattttgtt 19749961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31588742 - 31588682
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||| ||||| |||||||||||   |||||||||| ||||||||||||||    
T  31588742 tttaataccttgttaccatcagaacttaaggtggtcatgttaaacatattttgttccaaca 31588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4887444 - 4887505
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  4887444 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 4887505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5430299 - 5430360
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  5430299 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 5430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 18222025 - 18222122
Alignment:
Q  191 caacataaaagaaagtttagttacacatagaatgcttaacaaataaaataacgttgatagatgttggagattcatcaagaagcttgtatccaagcttc 288  Q
    ||||| |||||| ||||||||||| ||| |||| | |||| || |||| ||| || ||||||||||||||  |||||| | ||||| || ||||||||    
T  18222025 caacacaaaagagagtttagttacccatggaattcataactaacaaaagaacattcatagatgttggagaagcatcaatatgcttgaatacaagcttc 18222122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26119536 - 26119475
Alignment:
Q  1 tttaatacattgttatcatcaaaactt-aaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||| || ||||||  | |||||||||| |||||||||||||    
T  26119536 tttaataccttgttatcatcaaaatttaaaggtggtagtgttaaacactttttgttccaaca 26119475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24547959 - 24547911
Alignment:
Q  13 ttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||| | |||| ||||||||| ||||||||| ||||    
T  24547959 ttatcatcaaaacttaaagagacattgttaaacatattttgttctaaca 24547911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 34638905 - 34638965
Alignment:
Q  2 ttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    ||||||| ||||||||||||||||| ||   |  ||||||||||||||||| |||||||||    
T  34638905 ttaataccttgttatcatcaaaactcaaaagggtaatgttaaacacattttattccaacac 34638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4684 - 4744
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4684 tttaataccttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 4744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 9e-24; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11514231 - 11514291
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11514231 tttaataccttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 11514291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19705811 - 19705871
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19705811 tttaatactttgttatcatcaaaacttaaggtggcaatgttaaacacattttgttccaaca 19705871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13654347 - 13654404
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttcca 58  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13654347 tttaataccttgttatcatcaaaacttaaggtgataatgttaaacacattttgttcca 13654404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21317739 - 21317799
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  21317739 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 21317799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13699740 - 13699800
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  13699740 tttaatatcttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 13699800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15552460 - 15552520
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  15552460 tttaataccttgttatcgtcaaaacttaaagagacaatgttaaacacattttgttccaaca 15552520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16794040 - 16793980
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  16794040 tttaataccttgttatcatcaaaacttaaggtggtaaagttaaacacattttgttccaaca 16793980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17761850 - 17761790
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  17761850 tttaataccttgttattatcaaaacttaaggtgacaatgttaaacacattctgttgcaaca 17761790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19063170 - 19063110
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  19063170 tttaataccttgttattatcaaaacttaaggtgacaatgttaaacacattctgttgcaaca 19063110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50722151 - 50722211
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  50722151 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtttcaaca 50722211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50790698 - 50790638
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  50790698 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtttcaaca 50790638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3087920 - 3087981
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||||||||||| |||||||||||| |||  ||||||||||| |||||||||||||||    
T  3087920 tttaatacattgttattatcaaaacttaatgtggtaatgttaaacaaattttgttccaacac 3087981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6252584 - 6252524
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||| |||||||||||||  |||||||||||||||||||| |||||    
T  6252584 tttaatactttgttatcattaaaacttaaggtggtaatgttaaacacattttgtttcaaca 6252524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7494708 - 7494768
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  ||| | ||||||||||||||||||||    
T  7494708 tttaatactttgttatcatcaaaacttaaggtggtaatatgaaacacattttgttccaaca 7494768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15648141 - 15648201
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||| ||||||||||| | || ||||||||||||||||||||||||||    
T  15648141 tttaataccttgttatcgtcaaaacttaaagagataatgttaaacacattttgttccaaca 15648201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12409620 - 12409558
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacacg 63  Q
    |||||||| ||||||||||||||||| || |  ||| ||||||||||||||||||||||||||    
T  12409620 tttaataccttgttatcatcaaaactcaaagaaacattgttaaacacattttgttccaacacg 12409558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13932337 - 13932398
Alignment:
Q  1 tttaatacattgttatcatcaaaactt-aaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||| ||| |||||| || ||||||||||||||||||||    
T  13932337 tttaataccttgttatcatcaaaacttaaagatgacaaagtcaaacacattttgttccaaca 13932398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6174471 - 6174411
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| || ||||||| |||||||||||||  |||||||||||||||||||| |||||    
T  6174471 tttaatacttttttatcattaaaacttaaggtggtaatgttaaacacattttgtttcaaca 6174411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7477943 - 7478003
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||| ||||||||||||||||||  ||||| |||||||||||||| |||||    
T  7477943 tttaataccttgttttcatcaaaacttaaggtggtaatgtgaaacacattttgtttcaaca 7478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16882732 - 16882791
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaa 59  Q
    |||||||| || ||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  16882732 tttaataccttattatcatcaaaacttaaaggtggtaatgttaaacacattttgttccaa 16882791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6713509 - 6713568
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | || |||||||| |||||||||||||||||    
T  6713509 tttaataccttgttatcatcaaaactcaaag-gataatgttaagcacattttgttccaaca 6713568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10852207 - 10852267
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || |||  | ||| ||||||||||||||||||||    
T  10852207 tttaataccttgttatcatcaaaactaaaagtggtattgtcaaacacattttgttccaaca 10852267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14008027 - 14008086
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| ||  ||  ||||||||||||||||||||||||||    
T  14008027 tttaatactttgttatcatcaaaactaaaa-tggtaatgttaaacacattttgttccaaca 14008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19197578 - 19197519
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||| | |  |||||||||| |||||||||||||||    
T  19197578 tttaataccttgttatcatcaaaacttaaag-ggtaatgttaaacgcattttgttccaaca 19197519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27851953 - 27852013
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||| | ||||||||||||||| ||||||||  ||||||||| | ||||||||||||||    
T  27851953 tttaatgccttgttatcatcaaaatttaaggtggtaatgttaaatagattttgttccaaca 27852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22141185 - 22141246
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  22141185 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 22141246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24775217 - 24775156
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  24775217 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 24775156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12968787 - 12968847
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||  ||||||||||||||||| || | |  |||||||||||||||||||||||||||    
T  12968787 tttaatatcttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaacac 12968847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16304924 - 16304863
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||| ||| |||||||||||||||| ||| ||| |||||| ||||| |||||||||| ||||    
T  16304924 tttattaccttgttatcatcaaaacataatgtggcaatgtcaaacatattttgttcctacac 16304863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17698007 - 17698067
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||| |||||||||    
T  17698007 tttaataccttgttatcatcaaaactcaaagggt-aatgttaaacacatttttttccaacac 17698067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33583706 - 33583765
Alignment:
Q  4 aatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaacac 62  Q
    ||||| |||||||||||||||||  ||||| |  |||||||||||||||||||||||||||    
T  33583706 aataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaacac 33583765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33598326 - 33598385
Alignment:
Q  4 aatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaacac 62  Q
    ||||| |||||||||||||||||  ||||| |  |||||||||||||||||||||||||||    
T  33598326 aataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaacac 33598385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14077095 - 14077035
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||  |||||||||||||||| || |||  | ||| ||||||||||||||||||||    
T  14077095 tttaataccctgttatcatcaaaactcaaagtggtattgtcaaacacattttgttccaaca 14077035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 21682868 - 21682811
Alignment:
Q  3 taatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaac 60  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21682868 taatactttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaac 21682811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 66 - 290
Target Start/End: Complemental strand, 14526739 - 14526519
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatat 165  Q
    |||||||||  | |||||||||||||||| |||||||||  ||| | |||||  | || ||||||||||| |||| ||    ||||||| |||||||||     
T  14526739 acactacatagtaggcaaagcattaagaagaaatttaaactaaaaagtatattgaatgtataaatcatattcaaccat----attaagaatactacatag 14526644  T
Q  166 aatcatagatatttacatatggtcccaacataaaagaaagtttagttacacatagaatgcttaacaaataaaataacgttgatagatgttggagattcat 265  Q
    |||| ||  |||||||||    |||||||| ||||||  |||||||||| |||||||||  | || || ||||||| ||| ||||||||||||||| |||    
T  14526643 aatcctatctatttacatccaatcccaacacaaaagagggtttagttacccatagaatgtatgactaagaaaataaggttaatagatgttggagatgcat 14526544  T
Q  266 caagaagcttgtatccaagcttcct 290  Q
    ||| ||||||| || |||| |||||    
T  14526543 caacaagcttgaattcaagattcct 14526519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 15308505 - 15308594
Alignment:
Q  125 ataaatcatatacaacaatccaaattaagagtactacatataatcatagatatttacatatggtcccaacataaaagaaagtttagttac 214  Q
    |||||||||||||||||| ||| ||||||||||||||||| | |||||| ||| ||||| |  | ||||||||||||| |||||||||||    
T  15308505 ataaatcatatacaacaaaccagattaagagtactacataaattcatagctatatacatctaattccaacataaaagagagtttagttac 15308594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16478407 - 16478346
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  16478407 tttaataccttgttatcatctaagcttaaggtggcaatgttaaacacattttgttccaacac 16478346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18129675 - 18129615
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| || ||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  18129675 tttaataccttattatcatcaaagcttaaggtggtaatgttaaacacattttgttccaaca 18129615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 20618043 - 20618126
Alignment:
Q  81 caaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacata 164  Q
    ||||||||||| ||  ||||||||| |||||||||||  | | ||||||||||||||||| | ||| |||||||||||||||||    
T  20618043 caaagcattaaaaatgaatttaaattaaagattatattgaatccataaatcatatacaaccaaccagattaagagtactacata 20618126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18896221 - 18896161
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| ||||||||||||||||| || | || |||||||||||||||||||||||||||    
T  18896221 tttaataccttgttatcatcaaaactcaaag-gataatgttaaacacattttgttccaacac 18896161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9347663 - 9347723
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||| ||| ||||||||||||||||||||||||  ||||||||||| |||||||| |||||    
T  9347663 tttagtaccttgttatcatcaaaacttaaggtggtaatgttaaacatattttgttacaaca 9347723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18516833 - 18516773
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||| |||| |||  |||||||||| |||||||||||||||    
T  18516833 tttaatactttgttatcatcaaaagttaaagtggtaatgttaaactcattttgttccaaca 18516773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16870394 - 16870455
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||  |||||||||||||||||||| ||| | |||| |||||||||||||||||||||    
T  16870394 tttaatatcttgttatcatcaaaacttaaaggtaataatggtaaacacattttgttccaaca 16870455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2268969 - 2269031
Alignment:
Q  1 tttaatacattgttatcatcaaaactt--aaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| ||||||||||||||||||  || | || |||||||||||||||||||||||||||    
T  2268969 tttaataccttgttatcatcaaaacttttaaag-gataatgttaaacacattttgttccaacac 2269031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2819000 - 2818940
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||  ||||||||||||||||| || | | |||||||||||| ||||||||||||||    
T  2819000 tttaatattttgttatcatcaaaactcaaagaggcaatgttaaacatattttgttccaaca 2818940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20909872 - 20909931
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||||||||||||    
T  20909872 tttaataccttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaaca 20909931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1090181 - 1090123
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaac 60  Q
    |||||||| |||||||||||||| || || | || |||||||||||||||||||||||||    
T  1090181 tttaataccttgttatcatcaaagctcaaag-gataatgttaaacacattttgttccaac 1090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 230
Target Start/End: Complemental strand, 19623728 - 19623577
Alignment:
Q  79 ggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatt 178  Q
    |||||| |||||| |||| |||||||  |||||||| ||  | || |||||||||||||||| | ||| ||||||||  || |||| |||  ||| ||||    
T  19623728 ggcaaatcattaaaaacatatttaaactaaagattacattgaatggataaatcatatacaaccaaccatattaagagcgctgcatagaatattagttatt 19623629  T
Q  179 tacatatggtcccaacataaaagaaagtttagttacacatagaatgcttaac 230  Q
    |||||    ||||||||||||| | |||||| |||| ||| |||||| ||||    
T  19623628 tacatccaatcccaacataaaatagagtttacttacccatggaatgcataac 19623577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25448172 - 25448111
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  25448172 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 25448111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4249583 - 4249521
Alignment:
Q  1 tttaatacattgttatcatcaaaactta---aggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||||||||||||||   |||| | | ||| ||||||||||||||||||||    
T  4249583 tttaatacattgttatcatcaaaacttattaaggtta-attgtgaaacacattttgttccaaca 4249521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4249907 - 4249845
Alignment:
Q  1 tttaatacattgttatcatcaaaactta---aggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||||||||||||||   |||| | | ||| ||||||||||||||||||||    
T  4249907 tttaatacattgttatcatcaaaacttattaaggtta-attgtgaaacacattttgttccaaca 4249845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4250231 - 4250169
Alignment:
Q  1 tttaatacattgttatcatcaaaactta---aggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||||||||||||||   |||| | | ||| ||||||||||||||||||||    
T  4250231 tttaatacattgttatcatcaaaacttattaaggtta-attgtgaaacacattttgttccaaca 4250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26279698 - 26279641
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttcca 58  Q
    |||||||| || |||||||||||| ||||| ||  || ||||||||||||||||||||    
T  26279698 tttaataccttattatcatcaaaatttaagatggtaaagttaaacacattttgttcca 26279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31359701 - 31359761
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||| | || | | || |||||||| |||||||||||||||    
T  31359701 tttaataccttgttatcatcaaaattcaaagaggcattgttaaactcattttgttccaaca 31359761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18047635 - 18047575
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18047635 tttaataccttgttatcatcaaaacttaaggtgaaaatgttaaacacattttgttccaaca 18047575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18361362 - 18361302
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18361362 tttaataccttgttatcatcaaaacttaaggtggcaatgttaaacacattttgttccaaca 18361302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5035745 - 5035805
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  5035745 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaatacattttgttccaaca 5035805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 16307455 - 16307396
Alignment:
Q  3 taatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  16307455 taataccttgttatcatcaaaacttaagttggtaatgttaaacacattttgttccaacac 16307396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14114468 - 14114529
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| || |||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  14114468 tttaatacgtttttatcatcaaaatttaaggtgacaatgttaaaaatattttgttccaacac 14114529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14424118 - 14424179
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| || |||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  14424118 tttaatacgtttttatcatcaaaatttaaggtgacaatgttaaaaatattttgttccaacac 14424179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16412457 - 16412517
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| || |||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  16412457 tttaataccttattatcatcaaaacttaaggtgacattgtcaaacacatttttttccaaca 16412517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 4810553 - 4810407
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatat 165  Q
    |||||||||  ||||||||||||||||||||||||||||  ||| || || |  |   ||||||||||||||||| | ||||| ||||||||||||||||    
T  4810553 acactacatcatcggcaaagcattaagaacaaatttaaactaaa-ataatcttgaaaacataaatcatatacaaccacccaaactaagagtactacatat 4810455  T
Q  166 aatcatagatatttacatatggtcccaacataaaagaaagtttagtta 213  Q
    |  ||| |  ||||||||    ||||||||| ||||| ||||||||||    
T  4810454 atacatggtcatttacatccaatcccaacatgaaagagagtttagtta 4810407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16307253 - 16307196
Alignment:
Q  1 tttaatacattgttatcatcaaaactt-aaggtgacaatgttaaacacattttgttcc 57  Q
    |||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  16307253 tttaatactttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgttcc 16307196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9063902 - 9063844
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaa 59  Q
    |||||||| |||||||||| |||||||||||||  ||||||||||||||  ||||||||    
T  9063902 tttaataccttgttatcattaaaacttaaggtggtaatgttaaacacataatgttccaa 9063844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11572020 - 11571964
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttcc 57  Q
    |||||||| ||||||||||||||||| || | | ||||||||||| |||||||||||    
T  11572020 tttaataccttgttatcatcaaaactcaaagaggcaatgttaaactcattttgttcc 11571964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13172124 - 13172064
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || |||  | ||| ||||||||||||||||||||    
T  13172124 tttaataccttgttatcatcaaaactcaaagtggtattgtcaaacacattttgttccaaca 13172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 19417775 - 19417819
Alignment:
Q  243 gttgatagatgttggagattcatcaagaagcttgtatccaagctt 287  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||    
T  19417775 gttgatagatgttggagatgcatcaacaagcttgaatccaagctt 19417819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7487598 - 7487536
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacacgg 64  Q
    |||||||| ||||||||||||||||| || | |  |||||||||| ||||||||||||||||||    
T  7487598 tttaataccttgttatcatcaaaactcaaagggt-aatgttaaactcattttgttccaacacgg 7487536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16111602 - 16111541
Alignment:
Q  1 tttaatacattgttatcatcaaaa--cttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||  ||||||| |  ||||||||||||||||||||||||||    
T  16111602 tttaataccttgttatcatcaaaattcttaagg-gttaatgttaaacacattttgttccaaca 16111541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23390749 - 23390688
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  23390749 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 23390688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 7395155 - 7395253
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacata 164  Q
    |||||||||| ||  |||||||||||||||| |||||||  |||| ||||||  | |||||||||| |||| ||||| | | ||||| | |||||||||    
T  7395155 acactacattgtcaacaaagcattaagaacacatttaaactaaaggttatattgaatgcataaatcttatataacaagcaagattaatattactacata 7395253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 19416343 - 19416417
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaac 140  Q
    |||||||||  ||| ||||||| ||||||| ||||||||  |||||||||||  | | |||||||||||||||||    
T  19416343 acactacatcctcgacaaagcaataagaacgaatttaaactaaagattatattgaatacataaatcatatacaac 19416417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23126324 - 23126384
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||  |||||||||||||| || || | | ||||||||||||||||||||||||||||    
T  23126324 tttaatattttgttatcatcaaa-ctcaaagaggcaatgttaaacacattttgttccaacac 23126384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24930306 - 24930244
Alignment:
Q  1 tttaatacattgttatcatcaaaact---taaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||||||||||||   ||||||  || ||| ||||||||||||||||||||    
T  24930306 tttaatacattgttatcatcaaaacttaataaggt-tcattgtgaaacacattttgttccaaca 24930244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14304104 - 14304045
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  |||||||||| |||||||||||||||    
T  14304104 tttaataccttgttatcatcaaaactaaaagggt-aatgttaaactcattttgttccaaca 14304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 31611813 - 31611945
Alignment:
Q  82 aaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatttac 181  Q
    ||||| ||||||||||| |||||  |||||||||||  | || || ||||||||| ||| | |||  |||||| |||| |||| ||||  || |||||||    
T  31611813 aaagctttaagaacaaagttaaactaaagattatattgaatggatgaatcatatataactagccatgttaagattactgcatagaatccaagctatttac 31611912  T
Q  182 atatggtcccaacataaaagaaagtttagttac 214  Q
    || |  |||||||| |||| | |||||||||||    
T  31611913 atctaatcccaacacaaaatatagtttagttac 31611945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24399091 - 24399151
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24399091 tttaataccttgttatcatcaaaacttaaggtgataatgttaaacacattttgttccaaca 24399151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31127091 - 31127031
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  31127091 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 31127031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10704297 - 10704237
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  10704297 tttaatactttgttatcatcaaaacttaaggtggtaatgttaaacacatattgttccaaca 10704237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23005753 - 23005691
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  23005753 tttaataccttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgttccaacac 23005691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23782613 - 23782675
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  23782613 tttaataccttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgttccaacac 23782675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 26186122 - 26186179
Alignment:
Q  5 atacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  26186122 ataccttgttatcatcaaaacttaaggtcgcgatgttaaacacattttgttccaacac 26186179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 28609264 - 28609182
Alignment:
Q  81 caaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacat 163  Q
    |||| ||| ||||||||||||||| ||||||||||||  | ||||||||||||||||||| |  || ||||| ||||||||||    
T  28609264 caaaacatcaagaacaaatttaaacaaaagattatattgaatgcataaatcatatacaaccaatcagattaatagtactacat 28609182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24728266 - 24728205
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||| || ||||||||| ||||| ||||||||||||||||||||||||||    
T  24728266 tttaataccttgttattatgaaaacttaaaggtgataatgttaaacacattttgttccaaca 24728205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12348566 - 12348625
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | || ||||||||||||||||||||||||||    
T  12348566 tttaataccttgttatcatcaaaactcaaag-gataatgttaaacacattttgttccaaca 12348625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 13145519 - 13145571
Alignment:
Q  10 ttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||| |||||||||||||||||  ||||||||||||| |||||||||||||    
T  13145519 ttgttaccatcaaaacttaaggtggtaatgttaaacacagtttgttccaacac 13145571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15552362 - 15552422
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||| |||||| |||||||| || |||||| |||||| ||||||||||||||||||||    
T  15552362 tttaatatattgttgtcatcaaacctaaaggtggcaatgtcaaacacattttgttccaaca 15552422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25596095 - 25596155
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||  |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  25596095 tttaataccttactatcatcaaaacttaaggtggcaatgttaagcacattttattccaaca 25596155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18171731 - 18171672
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaa 59  Q
    |||||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||||    
T  18171731 tttaataccttgttatcataaaaacttaaaggtggtaatgttaaacacattttgttccaa 18171672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23231582 - 23231637
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttc 56  Q
    |||||||| ||||||||||||||| ||||||||  ||| |||||||||||||||||    
T  23231582 tttaataccttgttatcatcaaaatttaaggtgctaatattaaacacattttgttc 23231637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24718467 - 24718408
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaa 59  Q
    |||||||| || ||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  24718467 tttaataccttattatcatcaaaacttaaaggtgataatgttaaatacattttgttccaa 24718408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19473247 - 19473308
Alignment:
Q  1 tttaatacattgttatcatcaaaact-taaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| ||||||||||||||||| ||| | || |||||||||||||||||||||||||||    
T  19473247 tttaataccttgttatcatcaaaactctaaag-gataatgttaaacacattttgttccaacac 19473308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 21847081 - 21847031
Alignment:
Q  11 tgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||||||||||||||||||  |||||||| || ||||||||||||||    
T  21847081 tgttatcatcaaaacttaaggtggtaatgttaagcatattttgttccaaca 21847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19626267 - 19626326
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||||||||||||    
T  19626267 tttaataccttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaaca 19626326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25592969 - 25593029
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || ||  || ||| ||||||||||||||||||||    
T  25592969 tttaataccttgttatcatcaaaactcaaagtagcattgtcaaacacattttgttccaaca 25593029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7618118 - 7618057
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  7618118 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 7618057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15955129 - 15955190
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  15955129 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 15955190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16877657 - 16877718
Alignment:
Q  1 tttaatacattgttatcatcaaaa--cttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||  ||||||| |  ||||||||||||||||||||||||||    
T  16877657 tttaatactttgttatcatcaaaattcttaagg-gttaatgttaaacacattttgttccaaca 16877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17381872 - 17381933
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  17381872 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 17381933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15477546 - 15477485
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| ||||||||||||||||| ||    ||| |||||||| ||||||||||||||||    
T  15477546 tttaataccttgttatcatcaaaactcaaaaaaacattgttaaactcattttgttccaacac 15477485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7812444 - 7812504
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||| |||||| ||   |  ||||||||||||||||||||||||||    
T  7812444 tttaatactttgttatcattaaaactcaaaagggtaatgttaaacacattttgttccaaca 7812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20577666 - 20577726
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20577666 tttaataccttgttatcatcaaaacttaaggtgaaaatgttaaacacattttgttccaaca 20577726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 214
Target Start/End: Original strand, 8717994 - 8718142
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatat 165  Q
    |||||||||  ||| ||||| |||||||||| |||||||  ||||||||||| || ||||||||||  ||||||| | ||| |||||||||||| ||||     
T  8717994 acactacatcgtcgtcaaagaattaagaacatatttaaactaaagattatattaaatgcataaatcgaatacaaccagccatattaagagtactgcataa 8718093  T
Q  166 aatcatagatatttacatatggtcccaacataaaagaaagtttagttac 214  Q
    |||| ||  |||||||||    |||||||| |||||| |||||||||||    
T  8718094 aatcctaactatttacatccaatcccaacacaaaagagagtttagttac 8718142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14356837 - 14356777
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  14356837 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 14356777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17812073 - 17812014
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17812073 tttaataccttgttatcatcaaaacttaag-tgacaatgttaaacacattttgttccaaca 17812014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21350291 - 21350231
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  21350291 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtttcaaca 21350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2652174 - 2652234
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||| ||||    
T  2652174 tttaataccttgttatcatcaaaactaaaggtgatagtgttaaacacattttgttcaaaca 2652234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10250266 - 10250325
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  10250266 tttaataccttgttatcatcaaaacttaaagggt-aatgttaaacacattttgttccaaca 10250325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 14867267 - 14867219
Alignment:
Q  13 ttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  14867267 ttatcatcaaaacttatggtggtaatgttaaacacattttgttccaaca 14867219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18776407 - 18776467
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||| ||||||||| |||||| | ||||||||||||||| ||||||||||    
T  18776407 tttaataccttgttaacatcaaaacataaggtaataatgttaaacacattgtgttccaaca 18776467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19888811 - 19888751
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| || ||||||||||||| || ||||  ||||||||||||||||||||||||||    
T  19888811 tttaatacctttttatcatcaaaacgtatggtggtaatgttaaacacattttgttccaaca 19888751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 10583820 - 10583738
Alignment:
Q  81 caaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacat 163  Q
    |||| |||||||||| ||||||||  |||||||| ||  | |||| |||||||||||||| | ||| ||||||||||||||||    
T  10583820 caaaacattaagaacgaatttaaactaaagattacattgaatgcaaaaatcatatacaaccagccagattaagagtactacat 10583738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11901658 - 11901717
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||||||||||||    
T  11901658 tttaataccttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaaca 11901717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12417282 - 12417223
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||||||||||||    
T  12417282 tttaataccttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaaca 12417223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 178
Target Start/End: Original strand, 17433449 - 17433545
Alignment:
Q  82 aaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatt 178  Q
    |||||| |||||||| |||||||  |||||||||||  | ||||||||||||||||||  | ||| | ||||||| ||||||| |||| ||| ||||    
T  17433449 aaagcagtaagaacacatttaaaccaaagattatattgaatgcataaatcatatacaatcagccagactaagagtgctacatagaatcctagctatt 17433545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29121809 - 29121871
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| |||||||||||||||||  ||||| |  |||||||||||||||||||||||||||    
T  29121809 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaacac 29121871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 55732229 - 55732290
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  55732229 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 55732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13306713 - 13306653
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatg-ttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||| | |||| || |||||| |||||||||||||||    
T  13306713 tttaatactttgttatcatcaaaacttaa-gagacattgtttaaactcattttgttccaaca 13306653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 17787704 - 17787648
Alignment:
Q  4 aatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||| ||||||||||||||||| || | |  ||||||||||||||||||||||||||    
T  17787704 aataccttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaaca 17787648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17540860 - 17540919
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||| |||||||||| || | |  ||||||||||||||||||||||||||    
T  17540860 tttaataccttgttaacatcaaaactcaaagggt-aatgttaaacacattttgttccaaca 17540919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7766 - 7826
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  7766 tttaataccttgttatcatcaaaacttaagatgataatgttaaacacattttgttccaaca 7826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32055 - 32115
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  32055 tttaataccttgttatcatcaaaacttaaagtgataatgttaaacacattttgttccaaca 32115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12194309 - 12194369
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12194309 tttaatattttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaaca 12194369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12438737 - 12438797
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12438737 tttaatattttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaaca 12438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22711016 - 22711076
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  22711016 tttaataccttgttatcatcaaaacttaaggtggaaatgttaaacacattttgttccaaca 22711076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1208404 - 1208341
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacaca-ttttgttccaacacg 63  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  1208404 tttaataccttgttatcatcaaaacttaaggtggcaatgttaaacacatttttgttccaacacg 1208341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23192321 - 23192261
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  23192321 tttaataccttgttatcatcaaaacttaaggtggtaatgttaaactcattttgttccaaca 23192261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 26280048 - 26280180
Alignment:
Q  82 aaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatatttac 181  Q
    ||||||||||||||| |||||||   ||||||||||  | |||||||||||||| |||  |  || |||||||||| |||||| |||| |||||||||||    
T  26280048 aaagcattaagaacagatttaaacctaagattatattgaatgcataaatcatatgcaattagtcagattaagagtaatacatagaatcctagatatttac 26280147  T
Q  182 atatggtcccaacataaaagaaagtttagttac 214  Q
    || |  |||||| ||||||| ||||| ||||||    
T  26280148 atctaatcccaatataaaagtaagttcagttac 26280180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19505189 - 19505141
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacat 49  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  19505189 tttaataccttgttatcatcaaaacttaaggtggcaatattaaacacat 19505141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 286
Target Start/End: Original strand, 11222903 - 11223123
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatat 165  Q
    |||||||||| ||  |||||||||||||||  ||||||| ||||| ||| ||  | | ||||||| |||||| || |  |||||||| |||||||||||     
T  11222903 acactacattgtcaacaaagcattaagaacggatttaaacaaaagtttaaattgaattcataaataatatacgaccaaacaaattaaaagtactacatag 11223002  T
Q  166 aatcatagatatttacatatggtcccaacataaaagaaagtttagttacacatagaatgcttaacaaataaaataacgttgatagatgttggagattcat 265  Q
    |||  ||  ||||||||| |  | || ||| |||| | ||||||||||| ||| ||| || |||  || || |||| |||||| || ||||||||  |||    
T  11223003 aatactaactatttacatctaattccgacacaaaatagagtttagttacccatggaaagcataaataacaagataatgttgatggaagttggagaagcat 11223102  T
Q  266 caagaagcttgtatccaagct 286  Q
    ||| ||||||| || ||||||    
T  11223103 caacaagcttgaatacaagct 11223123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15335759 - 15335698
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  15335759 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 15335698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15424824 - 15424763
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  15424824 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 15424763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15516128 - 15516067
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  15516128 tttaatactttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 15516067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24551731 - 24551792
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||| ||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  24551731 tttaatacatttttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 24551792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 18530443 - 18530472
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaag 30  Q
    ||||||||||||||||||||||||||||||    
T  18530443 tttaatacattgttatcatcaaaacttaag 18530472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45538172 - 45538113
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaa 59  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||    
T  45538172 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaa 45538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18773067 - 18773126
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||| ||||||||||||||||    
T  18773067 tttaataccttgttatcatcaaaactcaaag-ggtaatgttaaatacattttgttccaaca 18773126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22461341 - 22461282
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  |||||||||||||| |||||||||||    
T  22461341 tttaatactttgttatcatcaaaactcaaagggt-aatgttaaacacatattgttccaaca 22461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23352804 - 23352745
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  |||||||| |||||||||||||||||    
T  23352804 tttaataccttgttatcatcaaaactcaaagggt-aatgttaagcacattttgttccaaca 23352745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 560 - 501
Alignment:
Q  2 ttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  560 ttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1571 - 1510
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  1571 tttaatatcttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaacac 1510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8476 - 8537
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  8476 tttaataccttgttatcatccaaacataaggtgacaatgttaaacacattttattccaacac 8537  T

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Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 301
Target Start/End: Original strand, 15582999 - 15583220
Alignment:
Q  81 caaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatataatcatagatat-tt 179  Q
    |||||||||||||||| | |||||  |||||||||||  | | ||||||||||||||||| | ||| |||||||| |||||| | |||  ||| ||| ||    
T  15582999 caaagcattaagaacagaattaaactaaagattatatttaatacataaatcatatacaaccacccatattaagagcactacaaagaattctagctatctt 15583098  T
Q  180 acatatggtcccaacataaaagaaagtttagttacacatagaatgcttaacaaataaaataacgttgatagatgttggagattcatcaagaagcttgtat 279  Q
    |||| |  || ||||| |||||| |||||||||||  ||  ||||  |||| || |||| || |||||||||||||||| |  |||||| ||| | | ||    
T  15583099 acatctaatctcaacacaaaagagagtttagttaccaatgaaatgtataactaacaaaagaaggttgatagatgttggataagcatcaacaagttggaat 15583198  T
Q  280 ccaagcttcctggccccccaat 301  Q
    ||||||||||| |||| |||||    
T  15583199 ccaagcttcctagccctccaat 15583220  T

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Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24158261 - 24158321
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  24158261 tttaataccttgttatcatcaaaacctaaggtggtaatgttaaacacattttgttccaaca 24158321  T

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Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19320111 - 19320051
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| ||  ||||||||||||||||||||||||| ||||    
T  19320111 tttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 19320051  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24844512 - 24844572
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||||||||||||||| ||| |  ||| ||||||||||||||||||||    
T  24844512 tttaatacattgttatcatcaaaacttaaagtggctttgtcaaacacattttgttccaaca 24844572  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 15668280 - 15668229
Alignment:
Q  10 ttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||| || |||  ||||||||||||||||||||||||||    
T  15668280 ttgttatcatcaaaactcaatgtggtaatgttaaacacattttgttccaaca 15668229  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19115566 - 19115625
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||||||||||||    
T  19115566 tttaatactttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaaca 19115625  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28711377 - 28711316
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||    
T  28711377 tttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaaca 28711316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 32067456 - 32067511
Alignment:
Q  125 ataaatcatatacaacaatccaaattaagagtactacatataatcatagatattta 180  Q
    |||||||||||||||| |||||||||||| ||| |||||||| || ||| ||||||    
T  32067456 ataaatcatatacaaccatccaaattaagcgtattacatatattcctagttattta 32067511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38781816 - 38781877
Alignment:
Q  1 tttaatacattgttatcatcaaaactt--aaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||  || | || ||||||||||||||||||||||||||    
T  38781816 tttaataccttgttatcatcaaaacttttaaag-gataatgttaaacacattttgttccaaca 38781877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 15077649 - 15077711
Alignment:
Q  204 agtttagttacacatagaatgcttaacaaataaaataacgttgatagatgttggagattcatc 266  Q
    ||||||||||| ||| |||||| |||| || ||||||| || |||||||||||||||| ||||    
T  15077649 agtttagttacgcattgaatgcataactaacaaaataaggtagatagatgttggagatgcatc 15077711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 19643395 - 19643337
Alignment:
Q  3 taatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||| ||||||||||||||||| ||   |||| ||||| ||||||||||||||||||    
T  19643395 taataccttgttatcatcaaaactcaaaaagacattgttagacacattttgttccaaca 19643337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21846536 - 21846597
Alignment:
Q  1 tttaatacattgttatcatcaaaactt-aaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||| || ||| ||  ||| ||||||||||||||||||||||    
T  21846536 tttaataccttgttatcatcaaaatttcaagatggtaatattaaacacattttgttccaaca 21846597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 27728339 - 27728392
Alignment:
Q  82 aaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatat 135  Q
    ||||||||||||||| |||||||| |||| ||||||  | ||||||||||||||    
T  27728339 aaagcattaagaacatatttaaatcaaagtttatattgaatgcataaatcatat 27728392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10896113 - 10896053
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||||||||||||||||||| || || |||  | ||| ||||||||||| ||||||||    
T  10896113 tttaatacattgttatcatcaaagctcaaagtggtattgtcaaacacattttattccaaca 10896053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18703214 - 18703273
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  |||||||||||||||||||| |||||    
T  18703214 tttaataccttgttatcatcaaaactcaaag-ggtaatgttaaacacattttgtttcaaca 18703273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22683814 - 22683874
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    ||||||| |||||||| |||||| || |  | ||||||| |||||||||||||||||||||    
T  22683814 tttaatatattgttataatcaaatctcagagagacaatgataaacacattttgttccaaca 22683874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24440421 - 24440361
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||||||||||||||||||||| || ||   | | ||||||| ||||||||||||||    
T  24440421 tttaatacattgttatcatcaaaactcaaagtagtattattaaacaaattttgttccaaca 24440361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25196348 - 25196408
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || |||  | | ||||||||||||| ||||||||    
T  25196348 tttaataccttgttatcatcaaaactcaaagtggtattcttaaacacatttttttccaaca 25196408  T

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Target: scaffold0522 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3935 - 3875
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  3935 tttaataccttgttatcatcaaaacttaagatggtaatgttaaacacattttgttccaaca 3875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11218 - 11158
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||||||  ||  ||||||||||||||||| ||||||||    
T  11218 tttaataccttgttatcatcaaaacttaacatggtaatgttaaacacattttattccaaca 11158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10085 - 10025
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  10085 tttaataccttgttatcatcaaaatttaaggtggtaatgttaaacacattttgttccaaca 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8972 - 8912
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  8972 tttaataccttgttatcatcaaaacataaggtggtaatgttaaacacattttgttccaaca 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1374 - 1313
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    |||||||  ||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  1374 tttaatatcttgttatcatcaaaatttaaggtggtaatgttaaacacattttgttccaacac 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1169 - 1229
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| || |||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  1169 tttaataccttattatcatcaaaacttaaggtgacattgtcaaacacatttttttccaaca 1229  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 112620 - 112680
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||| |||||||  || |||||||||||||||||||||||    
T  112620 tttaataccttgttatcatcaaaacataaggtggtaacgttaaacacattttgttccaaca 112680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 116228 - 116288
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||  |||||||||||||||| ||| |||  || |||||| ||||||||||||||||    
T  116228 tttaatatcttgttatcatcaaaacataaagtggtaacgttaaagacattttgttccaaca 116288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 785 - 835
Alignment:
Q  11 tgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  785 tgttatcatcaaaacttaagctgaaaatgttaaacaaattttgttccaaca 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1581 - 1520
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaacac 62  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||  ||||||| ||||||    
T  1581 tttaatacattgttatcatcaaaacataaggtggtaatgttaaacatgttttgttgcaacac 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 25374 - 25317
Alignment:
Q  2 ttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaac 60  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| | |||||||||||    
T  25374 ttaatacattgttatcatcaaaacataaggtagcaatgttaaaca-aatttgttccaac 25317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 3691 - 3642
Alignment:
Q  10 ttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaa 59  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  3691 ttgttatcatcaaaacttaaggtggtaatgttaaacacagtttgttccaa 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 87337 - 87396
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaa-ggtgacaatgttaaacacattttgttccaa 59  Q
    |||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||||    
T  87337 tttaataccttgttatcatcaaaacctaaaggtggtaatgttaaacacattttgttccaa 87396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 36279 - 36128
Alignment:
Q  66 acactacattttcggcaaagcattaagaacaaatttaaataaaagattatatcaattgcataaatcatatacaacaatccaaattaagagtactacatat 165  Q
    |||||||||| ||||||||| ||||||||||  ||||||  ||| |||||||    ||||||| |||||||||||   ||| ||||| |||||||||||     
T  36279 acactacattgtcggcaaagtattaagaacatgtttaaactaaa-attatattggatgcataagtcatatacaactggccagattaaaagtactacatag 36181  T
Q  166 aatcatagatatttacatatggtcccaacataaaagaaagtttagttacacat 218  Q
    | |  |||||||||||||    ||||| || |||| | |||||||||||||||    
T  36180 atttctagatatttacatccaatcccagcaaaaaatatagtttagttacacat 36128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 269169 - 269228
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||||||||||||    
T  269169 tttaataccttgttatcatcaaaactcaaag-gttaatgttaaacacattttgttccaaca 269228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8338 - 8399
Alignment:
Q  1 tttaatacattgttatcatcaaaact--taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||  ||| |||  ||||||||||||||||||||||||||    
T  8338 tttaataccttgttatcatcaaaactcttaaagtgt-aatgttaaacacattttgttccaaca 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5893 - 5953
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatg-ttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||||| | ||||||| ||||||  ||||||||||||||    
T  5893 tttaataccttgttatcatcaaaacttaa-gagacaatgtttaaacttattttgttccaaca 5953  T

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Target: scaffold0163 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36427 - 36365
Alignment:
Q  1 tttaatacattgttatcatcaaaact---taaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| |||||||||||||||||   ||||||  || ||||||||||||||||||||||||    
T  36427 tttaataccttgttatcatcaaaactcattaaggtt-cattgttaaacacattttgttccaaca 36365  T

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Target: scaffold0916 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2307 - 2248
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||| ||||||||||||||||    
T  2307 tttaataccttgttatcatcaaaactcaaagggt-aatgttaaatacattttgttccaaca 2248  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30260 - 30319
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || | |  ||||||||||||||||| ||||||||    
T  30260 tttaataccttgttatcatcaaaactcaaag-ggtaatgttaaacacattttcttccaaca 30319  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 59974 - 60034
Alignment:
Q  1 tttaatacattgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 61  Q
    |||||||| ||||||||||||||||| || |||  | | ||||||||||| ||||||||||    
T  59974 tttaataccttgttatcatcaaaactcaaagtggtattattaaacacattatgttccaaca 60034  T

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