View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15111_low_3 (Length: 282)
Name: NF15111_low_3
Description: NF15111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15111_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 26 - 266
Target Start/End: Complemental strand, 4389467 - 4389226
Alignment:
| Q |
26 |
ataatacttggagggttcaacagtttttgcagaagcattttcaactttcaacatacttcataggctatccttatcactttctcgagacagcaaatg-cat |
124 |
Q |
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| T |
4389467 |
ataacacttggagggttcaacagtttttgcagaagcattttcaactttcaacatacttcataggctatccttatcactttctcgagacagcaaatggcat |
4389368 |
T |
|
| Q |
125 |
cacaccataaagaatcgatcttcaatgaatggcatgagttttgtgtgaaccaaaactctagccgactccatagataaccctttctccacctctacatgat |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
4389367 |
cacaccataaagaatcgatcttcaatgaatggcatgagttttgtgtgaaccaaaactctagctgactccatagataaccctttctccacctctacatgat |
4389268 |
T |
|
| Q |
225 |
caatctttcctatcttatcaataacaagttccatatttttca |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
4389267 |
caatctttcctatcttatcaataacaagttccatatttttca |
4389226 |
T |
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